Motif IL_40287.1 Version IL_40287.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-13 | 5-6 | 6-11 | 7-10 | 8-9 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZJR_045 | 2ZJR | 0 | 0 | 8x7 Sarcin-Ricin; G-bulge (H) | X | A | 1275 | U | 1276 | G | 1277 | A | 1278 | G | 1279 | U | 1280 | A | 1281 | A | 1282 | * | U | 1994 | G | 1995 | A | 1996 | A | 1997 | A | 1998 | U | 1999 | U | 2000 | cWW | cwW | tSH | ncSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUGAGUAA*UGAAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAGUA*GAAAU | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_40287.1 | Only in the parent motif |
|---|---|---|---|
| IL_87158.1 Compare | IL_2ZJR_045 | IL_3F1H_006, IL_1JBR_002, IL_1Q96_003, IL_1Q96_002, IL_1Q96_001, IL_1S72_006, IL_1JBR_001, IL_2ZJR_006, IL_3F1H_047, IL_2ZJR_007 |
Children motifs
| Child motif | Common motif instances | Only in IL_40287.1 | Only in the child motif |
|---|---|---|---|
| IL_85647.1 Compare | IL_2ZJR_045 | IL_3UXR_006, IL_3UXR_046, IL_2QBG_048, IL_1JBR_002, IL_1Q96_003, IL_4A1C_008, IL_1Q96_001, IL_1Q96_002, IL_3U5H_148, IL_1JBR_001, IL_1S72_006, IL_4A1B_003, IL_2QBG_011, IL_4A1B_118, IL_2ZJR_007, IL_2ZJR_006, IL_3U5H_122 |
- Annotations
-
- 8x7 Sarcin-Ricin; G-bulge (H) (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
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