4YB1 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4YB1_001 | 1/R/31:36 | GNRA | homologous HL_4YAZ_003 HL_34789.4 | |
| HL_4YB1_002 | 1/R/65:76 | No text annotation | geometric HL_2Y9H_003 HL_75660.8 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4YB1_001 | 1/R/12:13, 1/R/95:97 | Minor groove platform related | geometric IL_3K0J_002 IL_34520.3 | |
| IL_4YB1_002 | 1/R/22:26, 1/R/41:45 | Triple sheared | homologous IL_4YAZ_006 IL_15190.2 | |
| IL_4YB1_003 | 1/R/52:54, 1/R/87:88 | Multiple bulged bases | homologous IL_4YAZ_007 IL_71421.3 | |
| IL_4YB1_004 | 1/R/56:57, 1/R/82:85 | Multiple bulged bases | homologous IL_4YAZ_008 IL_71421.3 | |
| IL_4YB1_005 | 1/R/60:64, 1/R/77:79 | Isolated basepair with bulged bases | geometric IL_1XJR_001 IL_34117.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4YB1_001 | 1/R/14:21, 1/R/46:50, 1/R/90:94 | No text annotation | homologous J3_4YAZ_002 J3_96372.2 |
Problematic loops
No problematic loops
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