9A9V Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9A9V_001 | 1/A/57:61 | No text annotation | ||
| HL_9A9V_002 | 1/A/85:89 | No text annotation | ||
| HL_9A9V_003 | 1/A/113:118 | GNRA | geometric HL_4Y1M_003 HL_34789.4 | |
| HL_9A9V_004 | 1/A/144:150 | No text annotation | ||
| HL_9A9V_005 | 1/A/172:181 | No text annotation |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9A9V_001 | 1/A/7:8, 1/A/226:228 | Single stack bend | geometric IL_7MLX_001 IL_15011.2 | |
| IL_9A9V_002 | 1/A/10:12, 1/A/222:224 | Isolated non-canonical cWW pair | geometric IL_6OL3_002 IL_01003.3 | |
| IL_9A9V_003 | 1/A/15:16, 1/A/217:219 | Major groove platform | geometric IL_4OQU_002 IL_48076.8 | |
| IL_9A9V_004 | 1/A/20:21, 1/A/211:213 | Single stack bend | geometric IL_8P9A_328 IL_15011.2 | |
| IL_9A9V_005 | 1/A/24:29, 1/A/204:208 | No text annotation | ||
| IL_9A9V_006 | 1/A/46:49, 1/A/70:74 | No text annotation | ||
| IL_9A9V_007 | 1/A/50:51, 1/A/67:69 | No text annotation | geometric IL_8OI5_019 IL_14190.2 | |
| IL_9A9V_008 | 1/A/136:139, 1/A/155:158 | Tandem non-canonical cWW pairs | geometric IL_8P9A_419 IL_15225.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9A9V_001 | 1/A/44:45, 1/A/75:77, 1/A/97:99 | No text annotation | ||
| J3_9A9V_002 | 1/A/130:133, 1/A/161:164, 1/A/189:193 | No text annotation | ||
| J4_9A9V_001 | 1/A/33:39, 1/A/104:107, 1/A/124:125, 1/A/198:200 | No text annotation |
Problematic loops
No problematic loops
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