#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 71-72-64-5
1 IL_2AW7_0092AW700 A16S ribosomal RNAG128A129A130A131*U231G232C233cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAA*UGC1
Non-Watson-Crick part of the motif
SequenceCounts
AA*G1

Release history

Release0.60.70.80.90.100.110.121.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.15
Date2012-04-022013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-20
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_83920.1Only in the parent motif
IL_24421.1
Compare
IL_2AW7_009IL_2ZJR_019, IL_3KTW_002, IL_2ZJR_013, IL_2ZJR_010, IL_2AW7_052, IL_1NLC_002, IL_1T0E_002, IL_1NLC_001, IL_3O58_063, IL_2XZM_075, IL_3O58_061, IL_3O30_062, IL_1O9M_004, IL_3O58_145, IL_1S72_047, IL_2QBG_020, IL_2XZM_036, IL_2XZM_037, IL_405D_002, IL_405D_001, IL_1ZH5_001, IL_3O58_097, IL_2FQN_001, IL_2FQN_004, IL_2QBG_096, IL_2O3Y_004, IL_2O3Y_001, IL_2QBG_018, IL_1FJG_058, IL_3GLP_003, IL_2O3X_004, IL_1Z7F_002, IL_1FJG_056, IL_1Z7F_001, IL_3O58_148, IL_2XZM_006, IL_2XZM_001, IL_3BNL_004, IL_3BNL_001, IL_2ZJR_090, IL_2XZM_085, IL_3CUN_002, IL_2XZM_086, IL_2XZM_082, IL_3O58_048, IL_2QBG_083, IL_3O58_040, IL_2ZJR_036, IL_3O30_003, IL_2ZJR_030, IL_3O58_163, IL_3O58_022, IL_2QEK_001, IL_1FJG_044, IL_2XZM_015, IL_1ZEV_004, IL_1ZEV_005, IL_1ZEV_006, IL_3O30_084, IL_1ZEV_001, IL_1ZEV_002, IL_1ZEV_003, IL_1U9S_007, IL_2O3V_004, IL_1U6B_001, IL_3O30_089, IL_2O3V_001, IL_2XZM_090, IL_3PYO_039, IL_3NJ7_003, IL_3PYO_033, IL_2ZJR_029, IL_2ZJR_025, IL_3NJ7_002, IL_3O30_015, IL_3NJ7_001, IL_3NJ7_006, IL_3NJ7_004, IL_3NJ7_005, IL_3PYO_075, IL_2XZM_034, IL_1MFQ_003, IL_1MFQ_002, IL_3O30_091, IL_3A3A_001, IL_1KFO_003, IL_1KFO_002, IL_5MSF_001, IL_5MSF_002, IL_3O30_020, IL_2XZM_072, IL_1FJG_062, IL_1T0D_004, IL_1S72_085, IL_3BNQ_012, IL_3BNQ_001, IL_3G78_008, IL_3BNQ_006, IL_3BNQ_007, IL_3BNP_001, IL_3D0U_006, IL_3BNP_004, IL_3PYO_016, IL_3PYO_014, IL_3BNT_006, IL_3BNT_001, IL_3IVK_004, IL_157D_002, IL_1MWL_004, IL_157D_001, IL_1MWL_001, IL_3PYO_085, IL_3O58_132, IL_1MZP_001, IL_3O58_136, IL_2XZM_043, IL_2XZM_020, IL_2AW7_062, IL_1FJG_010, IL_3O58_032, IL_3DIR_006, IL_2ZKO_001, IL_1FJG_006, IL_2ZJR_100, IL_3IVK_002, IL_3O58_086, IL_3O58_126, IL_3O30_041, IL_3O58_009, IL_3O58_008, IL_2OE5_001, IL_2XZM_058, IL_3O30_033, IL_2QBG_040, IL_2Q1R_002, IL_2Q1R_001, IL_1S72_024, IL_1T0D_002, IL_3GLP_002, IL_3NJ6_002, IL_3NJ6_001, IL_3GLP_001, IL_3GLP_004, IL_3FO4_001, IL_1XJR_003, IL_1U6B_005, IL_1ZX7_008, IL_3O30_086, IL_1ZX7_006, IL_1ZX7_004, IL_1ZX7_002, IL_3O58_134, IL_3O30_052, IL_3O58_151, IL_1UN6_005, IL_2QBG_034, IL_2QBG_030, IL_2ZJR_079, IL_2AW7_064

Children motifs

Child motifCommon motif instancesOnly in IL_83920.1Only in the child motif
IL_92602.1
Compare
IL_2AW7_009IL_4CUV_026, IL_4CUV_020, IL_4CUX_091, IL_1VX6_134, IL_1FJG_010, IL_2AW7_052, IL_1NLC_002, IL_1T0E_002, IL_2AW7_064, IL_1NLC_001, IL_1O9M_003, IL_4FNJ_001, IL_4A1B_115, IL_3U5F_041, IL_4A1B_052, IL_3U5F_043, IL_4JK0_004, IL_4IOA_078, IL_1VX2_033, IL_1VX2_031, IL_4J5V_003, IL_4J5V_002, IL_4J5V_001, IL_4CUX_069, IL_2QBG_020, IL_4J5V_006, IL_4J5V_005, IL_3J7A_042, IL_4KNQ_001, IL_4KNQ_002, IL_3KTW_002, IL_4KNQ_004, IL_4KNQ_005, IL_4QCN_017, IL_3J7A_066, IL_157D_002, IL_157D_001, IL_4CUV_139, IL_1ZH5_001, IL_4CUV_133, IL_2FQN_001, IL_1VX2_007, IL_1VX6_122, IL_1YZ9_002, IL_3J7A_083, IL_2FQN_004, IL_4CUX_083, IL_4BPP_015, IL_4BPP_068, IL_4E59_001, IL_4CUX_089, IL_4CUV_156, IL_3J7A_049, IL_4A1B_048, IL_2QBG_018, IL_1VW3_079, IL_1VWW_024, IL_2O3X_004, IL_4A1B_041, IL_3U5H_076, IL_1FJG_056, IL_3U5F_050, IL_3SYW_003, IL_4A1B_112, IL_3J7A_079, IL_4BPP_056, IL_4QCN_079, IL_3J7A_072, IL_3J7A_073, IL_4CUX_015, IL_3U5F_015, IL_3BNL_001, IL_3J7A_077, IL_3J7A_074, IL_4E48_005, IL_4E48_004, IL_3U5H_008, IL_4E48_006, IL_4E48_001, IL_3U5H_017, IL_4E48_003, IL_4E48_002, IL_3CUN_002, IL_3FO4_001, IL_3J7A_054, IL_1VX6_034, IL_1VX6_115, IL_1XJR_003, IL_3IVK_004, IL_4BPP_001, IL_2QBG_083, IL_4A1B_028, IL_4IOA_054, IL_3U5F_082, IL_1VX6_118, IL_4BPP_038, IL_1VW3_009, IL_3BNQ_001, IL_2QEK_002, IL_2QEK_001, IL_1VWW_156, IL_1FJG_044, IL_1O9M_004, IL_1VW3_001, IL_4CUV_032, IL_1ZEV_004, IL_1ZEV_005, IL_1ZEV_006, IL_1ZEV_001, IL_1ZEV_002, IL_1ZEV_003, IL_4JK0_002, IL_2O3V_004, IL_3TD0_002, IL_4JK0_005, IL_4CUX_003, IL_3U5H_087, IL_4K31_003, IL_1VX6_049, IL_4QCN_052, IL_3U5H_109, IL_1S72_047, IL_4BPP_073, IL_4BPP_070, IL_3NJ7_002, IL_4K31_002, IL_4K31_001, IL_2Q1R_002, IL_4BPP_079, IL_4K31_004, IL_4IOA_104, IL_4A1B_061, IL_4CUV_039, IL_1VWW_114, IL_4J5V_007, IL_1VW3_016, IL_4CUV_074, IL_4IOA_109, IL_4IOA_025, IL_4KYY_001, IL_4KYY_003, IL_4NGF_002, IL_4CUX_034, IL_4CUV_120, IL_4BPP_082, IL_4BPP_083, IL_1KFO_003, IL_1KFO_002, IL_3U5F_034, IL_3U5F_036, IL_1VX2_062, IL_4CUV_008, IL_3UMY_001, IL_5MSF_001, IL_1ZX7_002, IL_1VX6_052, IL_4BPP_002, IL_4A1C_009, IL_1VW3_068, IL_1FJG_062, IL_3U5F_084, IL_3U5F_087, IL_3U5H_149, IL_4A1B_013, IL_3TD1_001, IL_1VW3_015, IL_4IOA_030, IL_3U5H_028, IL_4TS2_004, IL_3U5F_089, IL_1MFQ_003, IL_3BNQ_006, IL_1VX6_110, IL_1MFQ_002, IL_4CUX_022, IL_4CUX_023, IL_3BNP_001, IL_3J7A_028, IL_3D0U_006, IL_1VX2_079, IL_3GLP_001, IL_3BNP_004, IL_3U5F_002, IL_1VWW_165, IL_3BNT_006, IL_3BNT_001, IL_4M6D_011, IL_1VX6_019, IL_1VWW_002, IL_405D_002, IL_2QBG_034, IL_4CUV_086, IL_4KZD_003, IL_1MWL_004, IL_405D_001, IL_1MWL_001, IL_1T0D_002, IL_3U5H_022, IL_4CUV_118, IL_1MZP_001, IL_1UN6_005, IL_3U5H_036, IL_4AOB_005, IL_1VX6_088, IL_2AW7_063, IL_1S72_095, IL_3U5F_072, IL_1VW3_031, IL_3RW6_004, IL_3U5H_133, IL_3DIR_006, IL_4CUV_122, IL_3J7A_036, IL_2ZKO_001, IL_3J7A_032, IL_1VX2_002, IL_3SYW_001, IL_4IOA_010, IL_3J7A_038, IL_3J7A_039, IL_4QCN_033, IL_3MEI_002, IL_1VX6_073, IL_1VX6_071, IL_1RPU_001, IL_4A1B_015, IL_1VWW_074, IL_1VX6_078, IL_1YZ9_001, IL_1FJG_006, IL_4CUV_047, IL_4QCN_094, IL_4CUV_049, IL_4A1B_034, IL_4IOA_013, IL_3RG5_001, IL_3U5H_128, IL_1VX2_008, IL_2OE5_001, IL_4IOA_019, IL_3U5H_121, IL_1U6B_005, IL_1VX6_006, IL_1VW3_043, IL_1S72_024, IL_3U5F_065, IL_3SZX_001, IL_3U5F_063, IL_3U5F_061, IL_2Q1R_001, IL_4A1B_071, IL_3TD1_006, IL_2QBG_096, IL_1VWW_143, IL_4CUX_040, IL_4BPP_058, IL_3SZX_002, IL_3SZX_003, IL_4CUX_044, IL_1VX2_086, IL_3GLP_002, IL_3NJ6_002, IL_3NJ6_001, IL_4BPP_088, IL_4FNJ_002, IL_4JK0_001, IL_4A1B_083, IL_3TD0_005, IL_4QCN_080, IL_3TD0_006, IL_3TD0_001, IL_1VW3_092, IL_1ZX7_008, IL_1U6B_001, IL_4A1B_027, IL_4A1B_024, IL_4M4O_001, IL_4BPP_037, IL_2O3V_001, IL_3J7A_043, IL_4IOA_044, IL_1VX2_029, IL_1VX6_054, IL_3U5H_114, IL_4CUV_030, IL_3U5H_116, IL_1VX2_021, IL_3U5H_118, IL_4A1B_107, IL_4CUV_052, IL_3U5H_051, IL_2QBG_085, IL_3BNL_004, IL_4BPP_034, IL_2QBG_030, IL_3U5H_044, IL_1VWW_032, IL_4QCN_014, IL_4A1B_104, IL_1FJG_058, IL_4M4O_002, IL_4CUX_073, IL_1U9S_007, IL_3SYW_002, IL_1VWW_038, IL_4IOA_091, IL_3U5H_049, IL_2AW7_062
Annotations
Basepair signature
cWW-cWW-L-cWW
Heat map statistics
Min 0.00 | Avg 0.00 | Max 0.00
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