HL_97724.2

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name for chain		1		2		3		4		5		6		7		8		9	1-9	2-8	3-6
1	HL_1J2B_001	1J2B	0.5392	0		C	tRNA	C	932	C	933	U	934	U	935	A	936	C	937	G	938	A	939	G	940	cWW	cWW
2	HL_5T83_002	5T83	0.3928	0	Anticodon loop related	A	Guanidine-I riboswitch	U	56	U	57	U	58	C	59	A	60	C	61	A	62	A	63	A	64	cWW		ntSHa
3	HL_2AKE_002	2AKE	0.4339	0	tRNA anticodon loop	B	tRNA	A	31	C	32	U	33	C	34	C	35	A	36	G	37	A	38	U	39	cWW
4	HL_1N78_002	1N78	0.3678	0	tRNA anticodon loop	C	tRNA	C	531	C	532	U	533	C	534	U	535	C	536	A	537	A	538	G	539	cWW	ncWW
5	HL_3W3S_002	3W3S	0.4085	0	tRNA anticodon loop	B	Selenocysteine transfer RNA	A	31	C	32	U	33	U	34	C	35	A	36	A	37	A	38	U	39	cWW	ncWW
6	HL_4V90_033	4V90	0.3876	0	tRNA anticodon loop	AV	tRNA	A	31	U	32	U	33	G	34	A	35	A	36	A	37	A	38	U	39	cWW
7	HL_6UFM_002	6UFM	0.3764	0	tRNA anticodon loop	A	tRNA	G	32	C	33	U	34	G	35	A	36	U	37	A	38	A	39	C	40	cWW
8	HL_4V9K_034	4V9K	0.2752	0	tRNA anticodon loop	AW	tRNA	A	31	C	32	U	33	C	34	A	35	U	36	A	37	A	38	U	39	cWW	ncWW
9	HL_7U2I_104	7U2I	0.1990	0	tRNA anticodon loop	1w	tRNA	C	31	U	32	U	33	C	34	C	35	C	36	A	37	A	38	G	39	cWW
10	HL_5IBB_210	5IBB	0.2238	0	tRNA anticodon loop	1L	tRNA	C	31	C	32	U	33	U	34	A	35	C	36	A	37	A	38	G	39	cWW	ncWW
11	HL_4V9I_039	4V9I	0.2511	0	tRNA anticodon loop	AY	A-SITE tRNA	U	31	C	32	U	33	C	34	G	35	A	36	A	37	A	38	A	39	cWW
12	HL_6ORD_036	6ORD	0.2321	0	tRNA anticodon loop	QY	tRNA	C	31	U	32	U	33	G	34	G	35	C	36	A	37	A	38	G	39	cWW
13	HL_6UFG_007	6UFG	0.2216	0	tRNA anticodon loop	B	tRNA	G	32	C	33	U	34	G	35	A	36	U	37	A	38	A	39	C	40	cWW	ncWW
14	HL_4V50_137	4V50	0.1510	0	tRNA anticodon loop	CW	PHE TRNA (UNMODIFIED BASES)	G	31	C	32	U	33	C	34	A	35	U	36	A	37	A	38	C	39	cWW	ncWW
15	HL_4WT8_216	4WT8	0.1757	0	tRNA anticodon loop	D4	tRNA	G	32	C	33	U	34	C	35	A	36	U	37	A	38	A	39	C	40	cWW
16	HL_4V9Q_214	4V9Q	0.1161	0	tRNA anticodon loop	DV	tRNA	G	31	C	32	U	33	C	34	A	35	U	36	A	37	A	38	C	39	cWW
17	HL_4TUE_034	4TUE	0.0000	0	tRNA anticodon loop	QV	tRNA	G	31	C	32	U	33	C	34	A	35	U	36	A	37	A	38	C	39	cWW
18	HL_2AZX_005	2AZX	0.1719	0	tRNA anticodon loop	D	tRNA	A	531	C	532	U	533	C	534	C	535	A	536	G	537	A	538	U	539	cWW
19	HL_3TUP_002	3TUP	0.3468	0	tRNA anticodon loop	T	tRNA	A	31	C	32	U	33	G	34	A	35	A	36	A	37	A	38	U	39	cWW
20	HL_4YCO_002	4YCO	0.2831	0	tRNA anticodon loop	D	tRNA	A	31	U	32	U	33	G	34	A	35	A	36	A	37	A	38	U	39	cWW
21	HL_1U0B_002	1U0B	0.3337	0	tRNA anticodon loop	A	tRNA	A	31	U	32	U	33	G	34	C	35	A	36	A	37	A	38	U	39	cWW
22	HL_3WFS_002	3WFS	0.3784	0	tRNA anticodon loop	A	tRNA	A	31	C	32	U	33	G	34	A	35	A	36	A	37	A	38	U	39	ncWW	ncWW
23	HL_2ZNI_002	2ZNI	0.3162	0	tRNA anticodon loop	C	bacterial tRNA	A	31	C	32	U	33	C	34	U	35	A	36	A	37	A	38	U	39	cWW	cWW
24	HL_2IY5_002	2IY5	0.5173	0	tRNA anticodon loop	T	tRNA	A	31	C	32	U	33	G	34	A	35	A	36	A	37	A	38	U	39	cWW	ncWB
25	HL_4P5J_002	4P5J	0.5884	0	Anticodon loop related	A	tRNA-like 3' UTR element	C	25	U	26	C	27	G	28	A	29	C	30	A	31	C	32	G	33	cWW
26	HL_7KGA_001	7KGA	0.5944	1	Anticodon loop related	A	Flavivirus DB element	U	22	C	23	A	24	G	26	C	27	C	28	U	29	A	30	G	31	cWW	ncWW
27	HL_1J1U_002	1J1U	0.5994	0	tRNA anticodon loop	B	tRNA	A	532	C	533	U	534	G	535	U	536	A	537	G	538	A	539	U	540	cWW	ncWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GCUCAUAAC	4
ACUGAAAAU	3
ACUCCAGAU	2
AUUGAAAAU	2
GCUGAUAAC	2
CCUUACGAG	1
UUUCACAAA	1
CCUCUCAAG	1
ACUUCAAAU	1
ACUCAUAAU	1
CUUCCCAAG	1
CCUUACAAG	1
UCUCGAAAA	1
CUUGGCAAG	1
AUUGCAAAU	1
ACUCUAAAU	1
CUCGACACG	1
UCAAGCCUAG	1
ACUGUAGAU	1

Non-Watson-Crick part of the motif

Sequence	Counts
CUCAUAA	5
CUGAAAA	3
CUCCAGA	2
UUGAAAA	2
CUGAUAA	2
CUUACGA	1
UUCACAA	1
CUCUCAA	1
CUUCAAA	1
UUCCCAA	1
CUUACAA	1
CUCGAAA	1
UUGGCAA	1
UUGCAAA	1
CUCUAAA	1
UCGACAC	1
CAAGCCUA	1
CUGUAGA	1

Release history

Release	3.67	3.68	3.69	3.70	3.71	3.72	3.73	3.74	3.75	3.76
Date	2023-03-01	2023-03-29	2023-04-26	2023-05-24	2023-06-21	2023-07-19	2023-08-16	2023-09-13	2023-10-11	2023-11-08
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif HL_97724.2 Version HL_97724.2 of this group appears in releases 3.67 to 3.76 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif HL_97724.2 Version HL_97724.2 of this group appears in releases 3.67 to 3.76

Download

Csv

Json