6DLQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6DLQ_001 | 1/A/27:32 | UNCG | geometric HL_4PMI_004 HL_61337.5 | |
| HL_6DLQ_002 | 1/A/61:66 | UNCG | geometric HL_6DLR_002 HL_61337.5 | |
| HL_6DLQ_003 | 1/A/82:90 | T-loop related | geometric HL_6DLR_003 HL_77193.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6DLQ_001 | 1/A/12:15, 1/A/45:50 | tSH-tHW | geometric IL_6DLR_001 IL_43716.1 | |
| IL_6DLQ_002 | 1/A/16:20, 1/A/42:44 | 8-nt loop receptor | geometric IL_6DLR_002 IL_83497.1 | |
| IL_6DLQ_003 | 1/A/21:22, 1/A/39:41 | Minor groove platform | geometric IL_6DLR_003 IL_34520.4 | |
| IL_6DLQ_006 | 1/A/21:23, 1/A/36:41 | No text annotation | homologous IL_6DLR_006 IL_49163.1 | |
| IL_6DLQ_004 | 1/A/22:23, 1/A/36:39 | Multiple bulged bases | geometric IL_6DLR_004 IL_77710.2 | |
| IL_6DLQ_005 | 1/A/77:80, 1/A/92:96 | tWW and near cWH | geometric IL_6DLR_005 IL_45860.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_6DLQ_001 | 1/A/5:7, 1/A/55:56, 1/A/71:75, 1/A/98:104 | No text annotation | homologous J4_6DLR_001 J4_59845.1 |
Problematic loops
No problematic loops
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