4P9R Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4P9R_002 | 1/A/241:249 | tRNA anticodon loop | geometric HL_6UFM_002 HL_06059.7 | |
| HL_4P9R_003 | 1/A/295:302 | No text annotation | geometric HL_4WF9_003 HL_75660.5 | |
| HL_4P9R_004 | 1/A/317:322 | GNRA | geometric HL_6N2V_002 HL_37824.8 | |
| HL_4P9R_006 | 1/A/567:572 | GNRA | geometric HL_6U8D_002 HL_37824.8 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4P9R_001 | No text annotation | ||
| HL_4P9R_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4P9R_001 | 1/A/3:4, 1/A/263:284 | No text annotation | ||
| IL_4P9R_002 | 1/A/15:18, 1/A/223:226 | Tandem non-canonical cWW pairs | geometric IL_4V88_432 NA | |
| IL_4P9R_003 | 1/A/290:293, 1/A/304:312 | No text annotation | ||
| IL_4P9R_004 | 1/A/333:343, 1/A/545:558 | No text annotation |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4P9R_001 | 1/A/7:11, 1/A/230:233, 1/A/257:260 | No text annotation |
Problematic loops
No problematic loops
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