8UIW Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8UIW_001 | 1/N/29:35 | Fab BL3-6 binding hairpin with tSW HL_22584.6 | ||
| HL_8UIW_002 | 1/N/50:59 | T-loop with unstacked turn HL_98864.1 | ||
| HL_8UIW_004 | 1/N/105:110 | Mini UNCG HL_56334.1 | ||
| HL_8UIW_005 | 1/R/29:35 | Fab BL3-6 binding hairpin with tSW | geometric HL_4KZD_001 HL_22584.6 | |
| HL_8UIW_006 | 1/R/50:59 | T-loop with unstacked turn | geometric HL_4FRN_007 HL_27670.2 | |
| HL_8UIW_007 | 1/R/74:83 | No text annotation | ||
| HL_8UIW_008 | 1/R/105:110 | Mini UNCG | geometric HL_5SWD_005 HL_48778.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8UIW_003 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8UIW_001 | 1/N/44:46, 1/N/63:64 | Single bulged A IL_31462.6 | ||
| IL_8UIW_002 | 1/N/100:103, 1/N/112:115 | Tandem non-canonical cWW pairs IL_77658.1 | ||
| IL_8UIW_003 | 1/R/44:46, 1/R/63:64 | Single bulged A | geometric IL_4V88_409 NA | |
| IL_8UIW_004 | 1/R/100:103, 1/R/112:115 | Tandem non-canonical cWW pairs | geometric IL_4EYA_003 IL_77658.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_8UIW_001 | 1/N/9:22, 1/N/42:44, 1/N/64:65, 1/N/92:100, 1/N/115:121 | No text annotation J5_98690.1 | ||
| J5_8UIW_002 | 1/R/9:22, 1/R/42:44, 1/R/64:65, 1/R/92:100, 1/R/115:121 | No text annotation |
Problematic loops
No problematic loops
Coloring options: