#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 7 8 91-92-83-6
1 HL_4P5J_0024P5J0.60910Anticodon loop relatedAC25U26C27G28A29C30A31C32G33cWW
2 HL_4DR7_0334DR70.57170WC31C32U33G34G35A36A37A38G39ncWW
3 HL_4W29_0374W290.46300tRNA anticodon loop (H)AXC31C32U33U34A35C36A37A38G39cWWtSHa
4 HL_2AKE_0052AKE0.39430tRNA anticodon loopBA31||||7_556C32||||7_556U33||||7_556C34||||7_556C35||||7_556A36||||7_556G37||||7_556A38||||7_556U39||||7_556cWW
5 HL_2AKE_0022AKE0.39430tRNA anticodon loopBA31C32U33C34C35A36G37A38U39cWW
6 HL_2ZNI_0022ZNI0.35480CA31C32U33C34U35A36A37A38U39cWWcWW
7 HL_3WFS_0023WFS0.40660tRNA anticodon loopAA31C32U33G34A35A36A37A38U39ncWWncWW
8 HL_1U0B_0021U0B0.29010tRNA anticodon loopAA31U32U33G34C35A36A37A38U39cWW
9 HL_4YCO_0024YCO0.25120tRNA anticodon loopDA31U32U33G34A35A36A37A38U39cWW
10 HL_3TUP_0023TUP0.33340tRNA anticodon loopTA31C32U33G34A35A36A37A38U39cWW
11 HL_4V9I_0394V9I0.26790tRNA anticodon loopAYU31C32U33C34G35A36A37A38A39cWW
12 HL_5IBB_2105IBB0.24110tRNA anticodon loop1LC31C32U33U34A35C36A37A38G39cWWncWW
13 HL_4WT8_2164WT80.23210tRNA anticodon loopD4G32C33U34C35A36U37A38A39C40cWW
14 HL_4V9Q_2144V9Q0.20290tRNA anticodon loopDVG31C32U33C34A35U36A37A38C39cWW
15 HL_4TUE_0344TUE0.17190tRNA anticodon loopQVG31C32U33C34A35U36A37A38C39cWW
16 HL_4V6D_1374V6D0.21380CVG31C32U33C34A35U36A37A38C39cWW
17 HL_2AZX_0052AZX0.00000tRNA anticodon loopDA531C532U533C534C535A536G537A538U539cWW
18 HL_2AZX_0082AZX0.00000tRNA anticodon loopDA531||||6_555C532||||6_555U533||||6_555C534||||6_555C535||||6_555A536||||6_555G537||||6_555A538||||6_555U539||||6_555cWW
19 HL_4P95_0024P950.29560Anticodon loop relatedAG241C242U243A244A245U246C247A248C249cWW
20 HL_4P8Z_0014P8Z0.31370AG23C24U25A26A27U28C29A30C31cWWncWW
21 HL_4V9K_0344V9K0.32640tRNA anticodon loopAWA31C32U33C34A35U36A37A38U39cWWncWW
22 HL_4V4J_0024V4J0.35230tRNA anticodon loop (H)2A31C32U33G34A35A36A37A38U39cWWncWW
23 HL_4V90_0334V900.39750tRNA anticodon loopAVA31U32U33G34A35A36A37A38U39cWW
24 HL_3W3S_0063W3S0.36330tRNA anticodon loopBA31||||43_455C32||||43_455U33||||43_455U34||||43_455C35||||43_455A36||||43_455A37||||43_455A38||||43_455U39||||43_455cWWncWW
25 HL_3W3S_0023W3S0.36330tRNA anticodon loopBA31C32U33U34C35A36A37A38U39cWWncWW
26 HL_1N78_0021N780.33120tRNA anticodon loopCC531C532U533C534U535C536A537A538G539cWWncWW
27 HL_5T83_0025T830.37370Anticodon loop relatedAU56U57U58C59A60C61A62A63A64cWWntSHa
28 HL_1J2B_0011J2B0.47000CC932C933U934U935A936C937G938A939G940cWWcWW
29 HL_1J1U_0021J1U0.57050tRNA anticodon loopBA532C533U534G535U536A537G538A539U540cWWncWW
30 HL_1J1U_0051J1U0.57050tRNA anticodon loopBA532||||4_556C533||||4_556U534||||4_556G535||||4_556U536||||4_556A537||||4_556G538||||4_556A539||||4_556U540||||4_556cWWncWW
31 HL_3RG5_0103RG50.70800BG31||||1_556C32||||1_556U33||||1_556U34||||1_556C35||||1_556A36||||1_556A37||||1_556A38||||1_556C39||||1_556cWWcWW
32 HL_3RG5_0063RG50.70800tRNA anticodon loopBG31C32U33U34C35A36A37A38C39cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
ACUCCAGAU4
GCUCAUAAC4
ACUGAAAAU3
CCUUACAAG2
AUUGAAAAU2
GCUAAUCAC2
ACUUCAAAU2
ACUGUAGAU2
GCUUCAAAC2
CUCGACACG1
CCUGGAAAG1
ACUCUAAAU1
AUUGCAAAU1
UCUCGAAAA1
ACUCAUAAU1
CCUCUCAAG1
UUUCACAAA1
CCUUACGAG1
Non-Watson-Crick part of the motif
SequenceCounts
CUCAUAA5
CUCCAGA4
CUUCAAA4
CUGAAAA3
CUUACAA2
UUGAAAA2
CUAAUCA2
CUGUAGA2
UCGACAC1
CUGGAAA1
CUCUAAA1
UUGCAAA1
CUCGAAA1
CUCUCAA1
UUCACAA1
CUUACGA1

Release history

Release3.2
Date2018-09-26
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA anticodon loop (21)
  • (6)
  • Anticodon loop related (3)
  • tRNA anticodon loop (H) (2)
  • Basepair signature
    cWW-bif-R-R-R-R-R
    Heat map statistics
    Min 0.12 | Avg 0.48 | Max 0.94
    Help

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