Motif IL_95997.1 Version IL_95997.1 of this group appears in releases 3.80 to 3.83

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3	break		4		5		6	1-5	1-6	2-5	2-6	3-4	3-5
1	IL_364D_004	364D	0.6124	0	Self complementary	C+B	RNA (31-mer)	U	95	G	96	C	97	*	G	79	U	80	G	81		cWW	ncWW		cWW
2	IL_5ZTM_001	5ZTM	0.5762	0	Isolated non-canonical cWW pair	C	non-coding mRNA sequence roX2	U	118	A	119	G	120	*	C	162	C	163	G	164		cWW	ncWW		cWW
3	IL_8C3A_435	8C3A	0.4651	0		CM	SSU rRNA	G	830	G	831	A	832	*	U	810	U	811	C	812		cWW			cWW
4	IL_1NBS_006	1NBS	0.4958	0		B	RNase P class B	G	125	G	126	C	127	*	G	116	U	117	C	118		cWW	ncWW		cWW
5	IL_8C3A_069	8C3A	0.5092	0		1	LSU rRNA	C	1559	U	1560	U	1561	*	A	1570	G	1571	G	1572		cWW	ncWWa		cWW
6	IL_5UNE_004	5UNE	0.5263	0	Isolated non-canonical cWW pair	A+B	RNA (47-MER)	U	16	A	17	G	18	*	C	27	A	28	G	29		cWW	cWw		cWW
7	IL_7LYF_002	7LYF	0.4691	0	Isolated non-canonical cWW pair	A	Dengue virus SLA	U	46	G	47	G	48	*	C	84	A	85	A	86		cWW	ncWW		ncWW
8	IL_4M4O_001	4M4O	0.3158	0	Isolated non-canonical cWW pair	B	RNA (59-MER)	A	52	C	53	G	54	*	C	6	A	7	U	8		cWW	cWWa		cWW
9	IL_5UNE_006	5UNE	0.3498	0	Isolated non-canonical cWW pair	B+A	RNA (47-MER)	U	16	A	17	G	18	*	C	27	A	28	G	29		cWW	cWw		cWW
10	IL_4M6D_011	4M6D	0.3216	0	Isolated non-canonical cWW pair	H	aptamer	G	46	A	47	C	48	*	G	12	G	13	C	14		ncWW	cWW		cWW
11	IL_4R4V_006	4R4V	0.3931	2	Isolated non-canonical cWW pair	A	VS ribozyme RNA	G	724	A	725	C	726	*	G	749	G	752	C	753		cWW	cWW		cWW
12	IL_5TBW_378	5TBW	0.4204	1	Isolated non-canonical cWW pair	AS	5S rRNA	C	94	A	95	U	96	*	A	84	G	85	G	87		cWW	cWW		cWW
13	IL_8C3A_149	8C3A	0.3839	1	Isolated non-canonical cWW pair	3	5S rRNA	C	94	A	95	U	96	*	A	84	G	85	G	87		cWW	cWW		cWW
14	IL_5MSF_001	5MSF	0.2956	1	Isolated non-canonical cWW pair	R	RNA (18-mer)	C	13\|\|\|\|P_1	A	14\|\|\|\|P_1	C	15\|\|\|\|P_1	*	G	3\|\|\|\|P_1	G	4\|\|\|\|P_1	G	6\|\|\|\|P_1		cWW	cWW		cWW
15	IL_3D0U_006	3D0U	0.3397	0	Isolated non-canonical cWW pair	A	Lysine Riboswitch RNA	G	112	G	113	G	114	*	C	134	A	135	C	136		cWW	cWW		cWW
16	IL_3DIL_006	3DIL	0.3600	0	Isolated non-canonical cWW pair	A	RNA (174-MER)	G	115	G	116	G	117	*	C	137	A	138	C	139		cWW	cWW		cWW
17	IL_5TBW_127	5TBW	0.3456	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	3233	A	3234	C	3235	*	G	3252	G	3253	G	3254		cWW	cWW		cWW
18	IL_8D29_001	8D29	0.3887	0	Isolated non-canonical cWW pair	C	RNA (34-MER)	G	4	A	5	U	6	*	A	29	G	30	C	31		cWW	cWW		ncWW
19	IL_4M4O_002	4M4O	0.3309	0	Isolated non-canonical cWW pair	B	RNA (59-MER)	G	46	A	47	C	48	*	G	12	G	13	C	14		cWW	cWW		cWW
20	IL_8C3A_074	8C3A	0.2834	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	1782	A	1783	C	1784	*	G	1657	G	1658	C	1659		cWW	cWW		cWW
21	IL_2R8S_001	2R8S	0.3133	0	Isolated non-canonical cWW pair	R	P4-P6 RNA RIBOZYME DOMAIN	G	110	G	111	G	112	*	C	208	A	210	C	211		cWW	cWW		cWW
22	IL_5TBW_068	5TBW	0.2896	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	1786	A	1787	C	1788	*	G	1661	G	1662	C	1663		cWW	cWW		cWW
23	IL_4V88_472	4V88	0.2883	0	Isolated non-canonical cWW pair	A6	SSU rRNA	G	1727	A	1728	C	1729	*	G	1672	G	1673	C	1674		cWW	cWW		cWW
24	IL_3IVK_002	3IVK	0.3443	0	Isolated non-canonical cWW pair	M	class I ligase product	A	102	A	103	C	104	*	G	87	G	88	U	89		cWW	cWW		cWW	ncWW
25	IL_3HHN_004	3HHN	0.3265	0	Isolated non-canonical cWW pair	E	Class I ligase ribozyme, self-ligation product	A	102	A	103	C	104	*	G	87	G	88	U	89		cWW	cWW		cWW
26	IL_6CZR_118	6CZR	0.4105	0	Isolated non-canonical cWW pair	1a	SSU rRNA	C	68	G	69	G	70	*	C	94	A	95	G	96		cWW	ncWW		cWW
27	IL_4LFB_006	4LFB	0.4749	0	Isolated non-canonical cWW pair	A	SSU rRNA	C	67	G	68	G	69	*	C	99	A	101	G	102		cWW	cWW		cWW
28	IL_5J7L_061	5J7L	0.4574	0	Isolated non-canonical cWW pair	AA	SSU rRNA	C	1412	A	1413	U	1414	*	G	1486	G	1487	G	1488		cWW	cWW		cWW
29	IL_4LFB_059	4LFB	0.5071	0	Isolated non-canonical cWW pair	A	SSU rRNA	C	1412	A	1413	U	1414	*	G	1486	G	1487	G	1488		cWW	cWW		cWW
30	IL_5TBW_042	5TBW	0.4506	0	Isolated non-canonical cWW pair	1	LSU rRNA	U	1039	A	1040	U	1041	*	A	1009	G	1010	A	1011		cWW	cWW		cWW
31	IL_8C3A_045	8C3A	0.4339	0	Isolated non-canonical cWW pair	1	LSU rRNA	U	1035	A	1036	U	1037	*	A	1005	G	1006	A	1007		cWW	cWW		cWW
32	IL_8C3A_459	8C3A	0.4904	0	Isolated non-canonical cWW pair	CM	SSU rRNA	C	1308	G	1309	A	1310	*	U	1275	G	1276	G	1277		cWW			cWW
33	IL_5UNE_007	5UNE	0.4122	0	Isolated non-canonical cWW pair	A+B	RNA (47-MER)	G	31	G	32	C	33	*	G	12	G	13	C	14		cWW			ncWW
34	IL_5UNE_003	5UNE	0.4018	0	Isolated non-canonical cWW pair	B+A	RNA (47-MER)	G	31	G	32	C	33	*	G	12	G	13	C	14		cWW			cWW
35	IL_4V88_467	4V88	0.3780	0	Isolated non-canonical cWW pair	A6	SSU rRNA	U	1650	A	1651	C	1652	*	G	1748	A	1749	A	1750		cWW	cWw		cWW
36	IL_8AF0_001	8AF0	0.3639	0	Isolated non-canonical cWW pair	D+C	RNA (19-mer)	A	37	C	38	G	39	*	C	31	C	32	U	33		cWW			cWW
37	IL_5ED1_002	5ED1	0.4204	0	Isolated non-canonical cWW pair	B+C	RNA (23-mer)	G	13	A	14	C	15	*	G	9	A	10	C	11		cWW	cWw		cWW
38	IL_4V88_419	4V88	0.5116	0	Isolated non-canonical cWW pair	A6	SSU rRNA	C	646	G	647	G	648	*	C	686	G	687	G	688		cWW			cWW
39	IL_5H1K_001	5H1K	0.5976	0	Isolated non-canonical cWW pair	C+D	U4 snRNA (13-mer)	G	7	A	8	C	9	*	G	7	A	8	C	9		cWW			cWW
40	IL_7VFT_003	7VFT	0.5082	0	Isolated non-canonical cWW pair	A	RNA (23-mer)	C	11	A	12	G	13	*	C	11\|\|\|\|12_555	A	12\|\|\|\|12_555	G	13\|\|\|\|12_555		cWW			cWW
41	IL_4J50_002	4J50	0.4879	0	Isolated non-canonical cWW pair	A+B	RNA (19-mer)	C	10	A	11	G	12	*	C	10	A	11	G	12		cWW			cWW
42	IL_8C3A_474	8C3A	0.5179	0	Isolated non-canonical cWW pair	CM	SSU rRNA	U	1637	A	1638	C	1639	*	G	1735	A	1736	A	1737		cWW	ncWw		cWW
43	IL_7ECN_002	7ECN	0.5471	0	Isolated non-canonical cWW pair	A+B	RNA (12-mer)	G	8	A	9	C	10	*	G	3	C	4	C	5		cWW			cWW
44	IL_7ECN_001	7ECN	0.4726	0	Isolated non-canonical cWW pair	B+A	RNA (12-mer)	G	8	A	9	C	10	*	G	3	C	4	C	5		cWW			cWW
45	IL_7ECK_013	7ECK	0.4632	0	Isolated non-canonical cWW pair	J+I	DNA/RNA (5'-R(GPGPAPCPU)-D(P(CBR))-R(PGPAPAPUPCPC)-3')	A	8	A	9	U	10	*	A	3	C	4	U	5		cWW	ncWWa		cWW
46	IL_7ECK_015	7ECK	0.4275	0	Isolated non-canonical cWW pair	I+J	DNA/RNA (5'-R(GPGPAPCPU)-D(P(CBR))-R(PGPAPAPUPCPC)-3')	A	8	A	9	U	10	*	A	3	C	4	U	5		ncWW	ncWWa		cWW
47	IL_7A0S_031	7A0S	0.4230	0	Isolated non-canonical cWW pair	X	LSU rRNA	U	974	C	975	C	976	*	G	963	A	964	G	965		cWW	cWW		cWW
48	IL_7RQB_034	7RQB	0.3845	0	Isolated non-canonical cWW pair (H)	1A	LSU rRNA	U	963	C	964	C	965	*	G	952	A	953	G	954		cWW	cWW		cWW
49	IL_353D_001	353D	0.3756	0		B+A	RNA (12-mer)	U	15	G	16	C	17	*	G	8	U	9	G	10		cWW	ncWWa		cWW
50	IL_8E0F_002	8E0F	0.4045	0	Isolated non-canonical cWW pair	C+D	RNA (32-mer)	G	14	A	15	G	16	*	C	17	C	18	C	19		cWW	cWW		cWW
51	IL_8E4X_001	8E4X	0.4365	0	Isolated non-canonical cWW pair	C+D	RNA (32-mer)	G	14	A	15	G	16	*	C	17	C	18	C	19		cWW	cWW		cWW
52	IL_5C5W_002	5C5W	0.4524	0	Isolated non-canonical cWW pair	A	RNA (19-mer)	U	9\|\|A	C	10\|\|A	A	11\|\|A	*	U	9\|\|A\|\|5_556	C	10\|\|A\|\|5_556	A	11\|\|A\|\|5_556		cWW			cWW
53	IL_8C3A_121	8C3A	0.5847	0		1	LSU rRNA	G	2945	U	2946	U	2947	*	G	2929	A	2930	C	2931		cWW	ncWW		cWW
54	IL_4AOB_005	4AOB	0.3600	0	Isolated non-canonical cWW pair	A	SAM-I riboswitch	C	78	G	79	U	80	*	G	71	A	72	G	73		cWW	ncWW		cWW
55	IL_5E81_376	5E81	0.3908	0		3L	tRNA	G	27	U	28	U	29	*	A	41	A	42	U	43		ncWW	ncWW		cWW
56	IL_4WF9_055	4WF9	0.3427	0		X	LSU rRNA	G	1465	G	1466	G	1467	*	C	1622	U	1623	C	1624		cWW			cWW
57	IL_4V84_071	4V84	0.3458	0		AV	RNA (34-MER)	G	6192	U	6193	C	6194	*	G	6183	A	6184	U	6185	ncWW	cWW	ncWW		cWW
58	IL_1N33_070	1N33	0.3095	0		Z+Y	A-SITE MESSENGER RNA FRAGMENT	U	1	U	2	U	3	*	G	34	G	35	A	36		cWW	ncWWa		cWW
59	IL_4WF9_083	4WF9	0.2162	0	Isolated non-canonical cWW pair	X	LSU rRNA	C	2111	C	2112	U	2113	*	A	2260	A	2261	G	2262		cWW	ncWWa		cWW
60	IL_4V88_444	4V88	0.2825	0	Isolated non-canonical cWW pair	A6	SSU rRNA	G	1464	C	1465	G	1466	*	C	1173	C	1174	U	1175		cWW	ncBW		cWW
61	IL_8C3A_450	8C3A	0.2825	0	Isolated non-canonical cWW pair	CM	SSU rRNA	G	1450	C	1451	G	1452	*	C	1158	C	1159	U	1160		cWW	ncBW		cWW
62	IL_5TBW_103	5TBW	0.2810	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	2824	C	2825	U	2826	*	G	2863	A	2864	U	2865		cWW	cWWa		cWW
63	IL_5TBW_044	5TBW	0.2287	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	1087	U	1088	G	1089	*	C	1069	U	1070	U	1071		cWW		ncWw	cWW
64	IL_8C3A_047	8C3A	0.1758	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	1083	U	1084	G	1085	*	C	1065	U	1066	U	1067		cWW	ncWw		cWW
65	IL_3RW6_004	3RW6	0.0000	0	Isolated non-canonical cWW pair	H	constitutive transport element(CTE)of Mason-Pfizer monkey virus RNA	C	33	U	34	G	35	*	C	24	C	25	G	26		cWW	cWW		cWW
66	IL_4V9F_017	4V9F	0.1403	0	Isolated non-canonical cWW pair	0	LSU rRNA	C	558	U	559	U	560	*	A	597	C	598	G	599		cWW	cWW		cWW
67	IL_7ECP_002	7ECP	0.1718	0	Isolated non-canonical cWW pair	B+A	RNA (12-mer)	G	3	C	4	C	5	*	G	8	U	9	C	10		cWW	cWW		cWW
68	IL_7ECP_001	7ECP	0.1842	0	Isolated non-canonical cWW pair	B+A	RNA (12-mer)	G	8	U	9	C	10	*	G	3	C	4	C	5		cWW	cWW		cWW
69	IL_3LA5_001	3LA5	0.2564	0		A	Purine riboswitch	U	16	U	17	C	18	*	G	78	G	79	A	80		cWW	ncWW		cWW
70	IL_8AMI_001	8AMI	0.2495	0	Other IL	B+A	RNA (9-mer)	U	4	G	5\|\|A	G	6	*	U	4	G	5	G	6		cWW			cWW
71	IL_4V88_465	4V88	0.2089	0	Isolated non-canonical cWW pair	A6	SSU rRNA	G	1642	U	1643	C	1644	*	G	1757	U	1758	C	1759		cWW			cWW
72	IL_8C3A_472	8C3A	0.2529	0	Isolated non-canonical cWW pair	CM	SSU rRNA	G	1629	U	1630	C	1631	*	G	1744	U	1745	C	1746		cWW			cWW
73	IL_4V83_235	4V83	0.2908	0	Isolated non-canonical cWW pair	CV	domain 3 of PSIC IGR IRES RNA	G	6173	U	6174	G	6175	*	C	6153	U	6154	C	6155		cWW	ncwW		cWW
74	IL_4V88_475	4V88	0.3110	0		A6	SSU rRNA	U	1684	G	1685	C	1686	*	G	1715	C	1716	G	1717		cWW	ncWW		cWW
75	IL_8C3A_008	8C3A	0.1491	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	124	U	125	G	126	*	C	140	C	141	G	142		cWW	cWW		cWW
76	IL_5TBW_008	5TBW	0.1741	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	125	U	126	G	127	*	C	141	C	142	G	143		cWW	cWW		cWW
77	IL_4V9F_023	4V9F	0.2603	0	Isolated non-canonical cWW pair	0	LSU rRNA	C	899	U	900	G	901	*	C	763	C	764	G	765		cWW	cWW		cWW
78	IL_8C3A_029	8C3A	0.2313	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	934	U	935	G	936	*	C	799	C	800	G	801		cWW	ncWW		cWW
79	IL_5TBW_027	5TBW	0.2437	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	938	U	939	G	940	*	C	803	C	804	G	805		cWW	cWW		cWW
80	IL_7A0S_014	7A0S	0.2157	0	Isolated non-canonical cWW pair	X	LSU rRNA	C	819	U	820	A	821	*	U	685	C	686	G	687		cWW	cWW		cWW
81	IL_4WF9_020	4WF9	0.2080	0	Isolated non-canonical cWW pair	X	LSU rRNA	C	851	U	852	G	853	*	C	717	C	718	G	719		cWW	cWW		cWW
82	IL_5J7L_259	5J7L	0.1926	0	Isolated non-canonical cWW pair	DA	LSU rRNA	C	806	U	807	G	808	*	C	672	C	673	G	674		cWW	cWW		cWW
83	IL_7RQB_017	7RQB	0.1806	0		1A	LSU rRNA	C	806	U	807	G	808	*	C	672	C	673	G	674		cWW	cWW		cWW
84	IL_8C3A_023	8C3A	0.1939	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	788	C	789	U	790	*	G	666	U	667	C	668		cWW	cWW		cWW
85	IL_5TBW_021	5TBW	0.1953	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	792	C	793	U	794	*	G	668	U	669	C	670		cWW	cWW		cWW
86	IL_7A0S_020	7A0S	0.2083	0	Isolated non-canonical cWW pair	X	LSU rRNA	G	767	U	768	C	769	*	G	754	C	755	C	756		cWW	cWW		cWW
87	IL_8C3A_049	8C3A	0.1843	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	1116	U	1117	U	1118	*	A	1132	C	1133	U	1134		cWW	cWW		cWW
88	IL_5TBW_046	5TBW	0.1585	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	1120	U	1121	U	1122	*	A	1136	C	1137	U	1138		cWW	cWW		cWW
89	IL_4LFB_010	4LFB	0.1477	0	Isolated non-canonical cWW pair	A	SSU rRNA	C	186	C	187	C	188	*	G	190\|\|\|K	U	190\|\|\|L	G	191		cWW	cWW		cWW
90	IL_4LFB_063	4LFB	0.1451	0	Isolated non-canonical cWW pair	A	SSU rRNA	G	1464	C	1465	C	1466	*	G	1435	U	1436	C	1437		cWW	cWW		cWW
91	IL_6CZR_171	6CZR	0.1825	0	Isolated non-canonical cWW pair	1a	SSU rRNA	G	1442	C	1443	C	1444	*	G	1418	U	1419	C	1420		cWW	ncWW		cWW
92	IL_6CZR_122	6CZR	0.2595	0	Isolated non-canonical cWW pair	1a	SSU rRNA	G	196	U	197	G	198	*	C	181	C	182	C	183		cWW	cWW		ncWW
93	IL_4V8Q_188	4V8Q	0.3482	0		BY	SsrA	U	56	U	57	G	58	*	C	20	A	21	G	22		ncWW	ncWW		cWW
94	IL_5D0B_001	5D0B	0.2831	0	Isolated non-canonical cWW pair	F	RNA (17-mer)	A	37	A	38	U	39	*	A	31	C	32	U	33		cWW	cWW		cWW
95	IL_7MLW_006	7MLW	0.2624	0	Isolated tWW contact	F	Guanidine-I riboswitch	C	71	U	72	U	73	*	A	92	C	93	G	94		cWW			cWW
96	IL_1WNE_001	1WNE	0.2937	0		B+C	RNA (8-mer) + RNA (5-mer)	G	906	G	907	C	908	*	G	917	C	918	C	919		cWW			cWW
97	IL_4WZM_001	4WZM	0.2832	0	Isolated cWH basepair	B+C	RNA template + RNA primer	G	906	G	907	C	908	*	G	917	C	918	C	919		cWW	ncHW		cWW
98	IL_8C3A_464	8C3A	0.3032	0		CM	SSU rRNA	U	1338	G	1339	C	1340	*	G	1353	U	1354	A	1355		ncWW	ncWW		cWW
99	IL_8C3A_120	8C3A	0.2996	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	2890	A	2891	U	2892	*	A	2898	C	2899	C	2900		cWW	cWW		cWW
100	IL_5TBW_112	5TBW	0.3317	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	2918	A	2919	U	2920	*	A	2926	C	2927	C	2928		cWW	cWW		cWW
101	IL_7VYX_001	7VYX	0.4262	0	Isolated non-canonical cWW pair	C	sgRNA	G	11	A	12	C	13	*	G	53	C	54	C	55		cWW	ncWWa		ncWW
102	IL_4V9K_064	4V9K	0.3918	0	Isolated non-canonical cWW pair	AW	tRNA	C	50	A	51	G	52	*	C	62	C	63	G	64		cWW	ncWWa		cWW
103	IL_4YHW_001	4YHW	0.3152	0	Isolated non-canonical cWW pair	E+C	U6 snRNA fragment	C	68	C	69	U	70	*	A	11	C	12	G	13		cWW			cWW
104	IL_4WF9_042	4WF9	0.3062	0	Isolated non-canonical cWW pair	X	LSU rRNA	C	1160	A	1161	C	1162	*	G	1081	C	1082	G	1083		cWW	ncWW		cWW
105	IL_7MLW_001	7MLW	0.3663	0	Isolated non-canonical cWW pair	F	Guanidine-I riboswitch	U	4	C	5	G	6	*	C	57	A	58	A	59		cWW	cWWa		cWW
106	IL_6IA2_001	6IA2	0.3577	0	Isolated non-canonical cWW pair	A+B	RNA (19-mer)	G	2	A	3	G	4	*	C	16	C	17	C	18		cWW	cWW		cWW
107	IL_1KFO_003	1KFO	0.2981	0	Isolated non-canonical cWW pair	A	RNA (19-mer)	G	11	A	12	G	13	*	C	6\|\|\|\|8_555	C	7\|\|\|\|8_555	U	8\|\|\|\|8_555		cWW	cWW		cWW
108	IL_1KFO_002	1KFO	0.2981	0	Isolated non-canonical cWW pair	A	RNA (19-mer)	G	11\|\|\|\|8_555	A	12\|\|\|\|8_555	G	13\|\|\|\|8_555	*	C	6	C	7	U	8		cWW	cWW		cWW
109	IL_5Y7M_007	5Y7M	0.2835	0	Isolated non-canonical cWW pair	D	RNA (52-MER)	G	37	A	38	U	39	*	A	11	C	12	C	13		cWW	cWW		cWW
110	IL_6M6R_001	6M6R	0.2913	0	Isolated non-canonical cWW pair	B	RNA (8-mer)	G	2	C	3	C	4	*	G	5\|\|\|\|7_555	C	6\|\|\|\|7_555	C	7\|\|\|\|7_555		cWW			cWW
111	IL_6M6R_002	6M6R	0.2913	0	Isolated non-canonical cWW pair	B	RNA (8-mer)	G	2\|\|\|\|7_555	C	3\|\|\|\|7_555	C	4\|\|\|\|7_555	*	G	5	C	6	C	7		cWW			cWW
112	IL_4V9F_105	4V9F	0.2382	0	Isolated non-canonical cWW pair	9	5S rRNA	C	72	A	73	G	74	*	C	107	C	108	G	109		cWW	cWW		cWW
113	IL_3MEI_002	3MEI	0.2696	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	8	C	9	C	10	*	G	13	C	14	C	15		cWW	ncBW		cWW
114	IL_5CCB_001	5CCB	0.2854	0	Isolated non-canonical cWW pair	N	tRNA	A	37	A	38	U	39	*	A	31	C	32	U	33		cWW	cWW		cWW
115	IL_4V88_417	4V88	0.2918	0	Isolated non-canonical cWW pair	A6	SSU rRNA	A	973	A	974	C	975	*	G	624	C	625	U	626		cWW	cWW		cWW
116	IL_8C3A_427	8C3A	0.2647	0	Isolated non-canonical cWW pair	CM	SSU rRNA	A	958	A	959	C	960	*	G	622	C	623	U	624		cWW	cWW		cWW
117	IL_6OL3_002	6OL3	0.3025	0	Isolated non-canonical cWW pair	C	VA RNA	G	53	A	54	C	55	*	G	78	C	79	C	80		cWW	cWW		cWW
118	IL_8C3A_085	8C3A	0.2754	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	2084	A	2085	C	2086	*	G	1936	C	1937	U	1938		cWW	cWW		cWW
119	IL_5TBW_079	5TBW	0.3262	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	2106	A	2107	C	2108	*	G	1940	C	1941	U	1942		cWW	cWW		cWW
120	IL_6IA2_004	6IA2	0.3381	0	Isolated non-canonical cWW pair	A+B	RNA (19-mer)	G	11	A	12	G	13	*	C	7	C	8	C	9		cWW	cWW		cWW
121	IL_1Z7F_002	1Z7F	0.2892	0	Isolated non-canonical cWW pair	A	RNA (16-mer)	A	10	A	11	U	12	*	A	5\|\|\|\|6_765	C	6\|\|\|\|6_765	U	7\|\|\|\|6_765		cWW	cWW		cWW
122	IL_1YZ9_002	1YZ9	0.2794	0	Isolated non-canonical cWW pair	E+F	RNA (11-mer)	A	4	C	5	U	6	*	A	15	C	16	U	17		cWW	ncBW		cWW
123	IL_1YZ9_001	1YZ9	0.3089	0	Isolated non-canonical cWW pair	D+C	RNA (11-mer)	A	15	C	16	U	17	*	A	4	C	5	U	6		cWW	ncBW		cWW
124	IL_4P3T_005	4P3T	0.3009	1	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	16	A	18	G	19	*	C	30	C	31	C	32		cWW	cWW		cWW
125	IL_5MWI_006	5MWI	0.3266	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	8\|\|\|\|4_555	U	9\|\|\|\|4_555	G	10\|\|\|\|4_555	*	C	17	U	18	G	19		cWW			cWW
126	IL_5MWI_003	5MWI	0.3266	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	8	U	9	G	10	*	C	17\|\|\|\|4_555	U	18\|\|\|\|4_555	G	19\|\|\|\|4_555		cWW			cWW
127	IL_4E48_005	4E48	0.3474	0	Isolated non-canonical cWW pair	B+A	RNA (20-mer)	C	25	U	26	G	27	*	C	14	U	15	G	16		cWW			cWW
128	IL_2ZKO_001	2ZKO	0.3643	0	Isolated non-canonical cWW pair	C+D	RNA (21-mer)	U	9	U	10	A	11	*	U	9	U	10	A	11		cWW			cWW
129	IL_3GM7_001	3GM7	0.3106	0	Isolated non-canonical cWW pair	G+H	RNA (18-mer)	C	1	U	2	G	3	*	C	16	U	17	G	18		cWW			cWW
130	IL_4E59_001	4E59	0.2563	0	Isolated non-canonical cWW pair	A+B	RNA duplex containing CCG repeats	C	2	C	3	G	4	*	C	2	C	3	G	4		cWW	ncBW		cWW
131	IL_3GM7_002	3GM7	0.2564	0	Isolated non-canonical cWW pair	H+G	RNA (18-mer)	C	13	U	14	G	15	*	C	4	U	5	G	6		cWW			cWW
132	IL_3GM7_004	3GM7	0.2316	0	Isolated non-canonical cWW pair	H+G	RNA (18-mer)	C	7	U	8	G	9	*	C	10	U	11	G	12		cWW	ncWw		cWW
133	IL_3GM7_005	3GM7	0.3106	0	Isolated non-canonical cWW pair	H+G	RNA (18-mer)	C	4	U	5	G	6	*	C	13	U	14	G	15		cWW			cWW
134	IL_5MWI_005	5MWI	0.2787	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	11\|\|\|\|4_555	U	12\|\|A\|\|4_555	G	13\|\|\|\|4_555	*	C	14	U	15\|\|A	G	16		cWW			cWW
135	IL_5MWI_004	5MWI	0.2787	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	11	U	12\|\|A	G	13	*	C	14\|\|\|\|4_555	U	15\|\|A\|\|4_555	G	16\|\|\|\|4_555		cWW			cWW
136	IL_5MWI_007	5MWI	0.2402	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	5\|\|\|\|4_555	U	6\|\|\|\|4_555	G	7\|\|\|\|4_555	*	C	20	U	21	G	22		cWW			cWW
137	IL_5MWI_002	5MWI	0.2402	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	5	U	6	G	7	*	C	20\|\|\|\|4_555	U	21\|\|\|\|4_555	G	22\|\|\|\|4_555		cWW			cWW
138	IL_5VCI_002	5VCI	0.2564	0	Isolated non-canonical cWW pair	A+B	RNA (22-mer) + RNA (12-mer)	C	4	U	5	G	6	*	C	7	U	8	G	9		cWW	ncWw		cWW
139	IL_3GM7_003	3GM7	0.2705	0	Isolated non-canonical cWW pair	G+H	RNA (18-mer)	C	7	U	8	G	9	*	C	10	U	11	G	12		cWW	ncWw		cWW
140	IL_3GM7_006	3GM7	0.2899	0	Isolated non-canonical cWW pair	H+G	RNA (18-mer)	C	1	U	2	G	3	*	C	16	U	17	G	18		cWW	ncWw		cWW
141	IL_3SZX_001	3SZX	0.2561	0	Isolated non-canonical cWW pair	B+A	RNA (19-mer)	C	13	U	14	G	15	*	C	7	U	8	G	9		cWW			cWW
142	IL_4E48_003	4E48	0.2635	0	Isolated non-canonical cWW pair	B+A	RNA (20-mer)	C	31	U	32	G	33	*	C	8	U	9	G	10		cWW			cWW
143	IL_4E48_002	4E48	0.2287	0	Isolated non-canonical cWW pair	A+B	RNA (20-mer)	C	5	U	6	G	7	*	C	34	U	35	G	36		cWW			cWW
144	IL_4E48_001	4E48	0.2234	0	Isolated non-canonical cWW pair	B+A	RNA (20-mer)	C	37	U	38	G	39	*	C	2	U	3	G	4		cWW			cWW
145	IL_4E48_004	4E48	0.2279	0	Isolated non-canonical cWW pair	A+B	RNA (20-mer)	C	11	U	12	G	13	*	C	28	U	29	G	30		cWW	ncWw		cWW
146	IL_1UN6_005	1UN6	0.2420	0	Isolated non-canonical cWW pair	F	5S RIBOSOMAL RNA	C	95	U	96	G	97	*	C	79	U	80	G	81		cWW	ncWw		cWW
147	IL_5AOX_001	5AOX	0.1931	0	Isolated non-canonical cWW pair	C	ALU JO CONSENSUS RNA	C	18	A	19	C	20	*	G	9	C	10	G	11		cWW	cWW		cWW
148	IL_1U9S_007	1U9S	0.2167	0	Isolated non-canonical cWW pair	A	RIBONUCLEASE P	C	191	A	192	C	193	*	G	177	C	178	G	179		cWW	cWW		cWW
149	IL_5Y85_006	5Y85	0.2748	0	Isolated non-canonical cWW pair	C+D	RNA (18-mer) + DNA/RNA (50-MER)	G	13	A	14	C	15	*	G	4	C	5	C	6		cWW	cWW		cWW
150	IL_4JGN_004	4JGN	0.2989	0	Isolated non-canonical cWW pair	E	RNA (20-mer)	C	514	U	515	G	516	*	C	508\|\|\|\|4_555	U	509\|\|\|\|4_555	G	510\|\|\|\|4_555		cWW	ncWw		cWW
151	IL_4JGN_002	4JGN	0.2989	0	Isolated non-canonical cWW pair	E	RNA (20-mer)	C	514\|\|\|\|4_555	U	515\|\|\|\|4_555	G	516\|\|\|\|4_555	*	C	508	U	509	G	510		cWW	ncWw		cWW
152	IL_4KNQ_004	4KNQ	0.2653	0	Isolated non-canonical cWW pair	B	RNA (20-mer)	C	213	C	214	G	215	*	C	207\|\|\|\|4_555	C	208\|\|\|\|4_555	G	209\|\|\|\|4_555		cWW			cWW
153	IL_4KNQ_002	4KNQ	0.2653	0	Isolated non-canonical cWW pair	B	RNA (20-mer)	C	213\|\|\|\|4_555	C	214\|\|\|\|4_555	G	215\|\|\|\|4_555	*	C	207	C	208	G	209		cWW			cWW
154	IL_4E48_006	4E48	0.2945	0	Isolated non-canonical cWW pair	A+B	RNA (20-mer)	C	17	U	18	G	19	*	C	22	U	23	G	24		cWW	ncWw		cWW
155	IL_4NGF_002	4NGF	0.2744	0	Isolated non-canonical cWW pair	H+G	RNA (17-mer)	G	7	U	8	C	9	*	G	7	U	8	C	9		cWW	ncWw		cWW
156	IL_3SZX_002	3SZX	0.2826	0	Isolated non-canonical cWW pair	A+B	RNA (19-mer)	C	10	U	11	G	12	*	C	10	U	11	G	12		cWW	ncWw		cWW
157	IL_7OFW_001	7OFW	0.2891	0	Isolated non-canonical cWW pair	C	RNA (18-mer)	C	9	C	10	G	11	*	C	9\|\|\|\|7_555	C	10\|\|\|\|7_555	G	11\|\|\|\|7_555		cWW			cWW
158	IL_7ZLQ_001	7ZLQ	0.3151	0	Isolated non-canonical cWW pair	C	RNA (13-mer)	G	5	C	6	C	7	*	G	5\|\|\|\|8_555	C	6\|\|\|\|8_555	C	7\|\|\|\|8_555		cWW			cWW
159	IL_7OFZ_001	7OFZ	0.3241	0	Isolated non-canonical cWW pair	C	RNA (19-mer)	C	9\|\|\|\|7_555	C	10\|\|\|\|7_555	G	11\|\|\|\|7_555	*	C	9	C	10	G	11		cWW			cWW
160	IL_5E81_371	5E81	0.3091	0	Self complementary	1K	tRNA	A	41	A	42	U	43	*	G	27	U	28	U	29		cWW	cWW		ncWW
161	IL_4ZC7_001	4ZC7	0.3055	0	Isolated non-canonical cWW pair	A+B	RNA duplex	G	5	U	6	C	7	*	G	42	U	43	C	44		cWW	ncwW		cWW
162	IL_3TD0_001	3TD0	0.3212	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	5	U	6	C	7	*	G	42	U	43	C	44		cWW	ncWw		cWW
163	IL_4ZC7_004	4ZC7	0.3751	0	Isolated non-canonical cWW pair	B+A	RNA duplex	G	28	U	29	C	30	*	G	19	U	20	C	21		cWW	ncwW		cWW
164	IL_4P3T_001	4P3T	0.3595	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	42	U	43	C	44	*	G	5	U	6	C	7		cWW	ncWw		cWW
165	IL_7XPL_001	7XPL	0.3624	0	Isolated non-canonical cWW pair	G+H	BMG3 RNA strand A + BMG3 RNA strand B	C	22	U	23	U	24	*	A	6	U	7	G	8		cWW	cWw		cWW
166	IL_2O3V_001	2O3V	0.4031	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	42	U	43	C	44	*	G	5	U	6	C	7		cWW	cWw		cWW
167	IL_2O3X_004	2O3X	0.4888	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	19	U	20	C	21	*	G	28	U	29	C	30		cWW	cWw		cWW
168	IL_1L9A_007	1L9A	0.3920	0	Isolated cWH basepair	B	signal recognition particle RNA S domain	G	187	G	188	C	189	*	G	210	U	211	C	212		cWW			cWW
169	IL_4P3U_012	4P3U	0.3609	0	Isolated non-canonical cWW pair	D+C	RNA (23-mer)	G	28	U	29	C	30	*	G	19	U	20	C	21		cWW	ncWw		cWW
170	IL_1RPU_001	1RPU	0.3021	0	Isolated non-canonical cWW pair	D+C	RNA (21-mer)	U	9\|\|A	C	10\|\|A	A	11\|\|A	*	U	9\|\|A	C	10\|\|A	A	11\|\|A		cWW	ncBW		cWW
171	IL_7Y2B_001	7Y2B	0.3607	0	Isolated non-canonical cWW pair	S	RNA (13-mer)	C	3	U	4	G	5	*	C	9\|\|\|\|5_555	U	10\|\|\|\|5_555	G	11\|\|\|\|5_555		cWW			cWW
172	IL_7Y2B_003	7Y2B	0.3607	0	Isolated non-canonical cWW pair	S	RNA (13-mer)	C	3\|\|\|\|5_555	U	4\|\|\|\|5_555	G	5\|\|\|\|5_555	*	C	9	U	10	G	11		cWW			cWW
173	IL_1M5K_004	1M5K	0.3820	0	Isolated cWH basepair	B	RNA HAIRPIN RIBOZYME	G	72	G	73	G	74	*	C	79	U	80	U	81		ncWW			cWW
174	IL_4P43_004	4P43	0.4053	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	28	U	29	C	30	*	G	19	U	20	C	21		cWW	cWw		cWW
175	IL_5Z1I_001	5Z1I	0.4612	0	Isolated non-canonical cWW pair	A	RNA (21-mer)	G	5	U	6	C	7	*	G	19\|\|\|\|8_555	U	20\|\|\|\|8_555	C	21\|\|\|\|8_555		cWW	cWw		cWW
176	IL_5Z1I_004	5Z1I	0.4612	0	Isolated non-canonical cWW pair	A	RNA (21-mer)	G	5\|\|\|\|8_555	U	6\|\|\|\|8_555	C	7\|\|\|\|8_555	*	G	19	U	20	C	21		cWW	cWw		cWW
177	IL_5J7L_273	5J7L	0.5738	0	Isolated non-canonical cWW pair	DA	LSU rRNA	A	905	U	906	G	907	*	U	870	U	871	U	872		cWW	cWw		cWW
178	IL_4V88_433	4V88	0.5411	0	Isolated non-canonical cWW pair	A6	SSU rRNA	U	917	U	918	A	919	*	U	893	U	894	G	895		ncWW	cWw		cWW
179	IL_5TBW_115	5TBW	0.4358	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	3040	U	3041	U	3042	*	A	3012	U	3013	U	3014		cWW	cWw		cWW
180	IL_8C3A_124	8C3A	0.4242	0	Isolated non-canonical cWW pair	1	LSU rRNA	A	3012	U	3013	U	3014	*	A	2984	U	2985	U	2986		cWW	cWw		cWW
181	IL_5WTI_002	5WTI	0.4209	0	Isolated non-canonical cWW pair	B	RNA (123-MER)	G	18	U	19	C	20	*	G	10	U	11	C	12		cWW	cWw		cWW
182	IL_4TS2_004	4TS2	0.4041	0	Isolated non-canonical cWW pair	X+Y	Spinach aptamer RNA, bimolecular construct	G	20	U	21	G	22	*	C	77	U	78	C	79		cWW	cWw		cWW
183	IL_8C3A_037	8C3A	0.3628	0	Isolated non-canonical cWW pair	1	LSU rRNA	U	950	U	951	U	952	*	A	961	U	962	A	963		cWW	cWw		cWW
184	IL_5TBW_034	5TBW	0.3639	0	Isolated non-canonical cWW pair	1	LSU rRNA	U	954	U	955	U	956	*	A	965	U	966	A	967		cWW	cWw		cWW
185	IL_1ZX7_006	1ZX7	0.3476	0	Isolated non-canonical cWW pair	F+E	RNA (14-mer)	G	24	U	25	C	26	*	G	10	U	11	C	12		cWW	cWw		cWW
186	IL_1ZX7_004	1ZX7	0.3803	0	Isolated non-canonical cWW pair	D+C	RNA (14-mer)	G	24	U	25	C	26	*	G	10	U	11	C	12		cWW	cWw		cWW
187	IL_1T0E_002	1T0E	0.4072	0	Isolated non-canonical cWW pair	C+A	RNA (17-mer)	G	14	U	15	C	16	*	G	10\|\|A	U	11	C	12		cWW	cWw		cWW
188	IL_4KNQ_001	4KNQ	0.4111	0	Isolated non-canonical cWW pair	B	RNA (20-mer)	C	204	C	205	G	206	*	C	216\|\|\|\|4_555	C	217\|\|\|\|4_555	G	218\|\|\|\|4_555		cWW	cwW		cWW
189	IL_4KNQ_005	4KNQ	0.4111	0	Isolated non-canonical cWW pair	B	RNA (20-mer)	C	204\|\|\|\|4_555	C	205\|\|\|\|4_555	G	206\|\|\|\|4_555	*	C	216	C	217	G	218		cWW	cwW		cWW
190	IL_4V9F_047	4V9F	0.3278	0	Isolated non-canonical cWW pair	0	LSU rRNA	C	1303	U	1304	C	1305	*	G	1349	U	1350	G	1351		cWW	cWw		cWW
191	IL_5J7L_050	5J7L	0.3843	0	Isolated non-canonical cWW pair	AA	SSU rRNA	G	1193	U	1194	C	1195	*	G	1061	U	1062	C	1063		cWW	cWw		cWW
192	IL_4LFB_047	4LFB	0.3949	0	Isolated non-canonical cWW pair	A	SSU rRNA	G	1193	U	1194	C	1195	*	G	1061	U	1062	C	1063		cWW	cWw		cWW
193	IL_6CZR_157	6CZR	0.3600	0	Isolated non-canonical cWW pair	1a	SSU rRNA	G	1175	U	1176	C	1177	*	G	1044	U	1045	C	1046		cWW	ncWw		cWW
194	IL_6E7L_001	6E7L	0.3314	0	Isolated non-canonical cWW pair	A	RNA (22-mer)	C	17\|\|\|\|7_375	U	18\|\|\|\|7_375	G	19\|\|\|\|7_375	*	C	4	U	5	G	6	ncWW	cWW	cWw		cWW
195	IL_6E7L_003	6E7L	0.3314	0	Isolated non-canonical cWW pair	A	RNA (22-mer)	C	17	U	18	G	19	*	C	4\|\|\|\|7_375	U	5\|\|\|\|7_375	G	6\|\|\|\|7_375	ncWW	cWW	cWw		cWW
196	IL_5MWI_008	5MWI	0.3621	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	2\|\|\|\|4_555	U	3\|\|\|\|4_555	G	4\|\|\|\|4_555	*	C	23	U	24	G	25		cWW	cWw		cWW
197	IL_5MWI_001	5MWI	0.3621	0	Isolated non-canonical cWW pair	A	RNA G(CUG)8C duplex	C	2	U	3	G	4	*	C	23\|\|\|\|4_555	U	24\|\|\|\|4_555	G	25\|\|\|\|4_555		cWW	cWw		cWW
198	IL_5VCI_001	5VCI	0.3893	0	Isolated non-canonical cWW pair	A+B	RNA (22-mer) + RNA (12-mer)	C	1	U	2	G	3	*	C	10	U	11	G	12		cWW	cWw		cWW
199	IL_4PCJ_001	4PCJ	0.3866	0	Isolated non-canonical cWW pair	A	trCUG-3('5)	C	1	U	2	G	3	*	C	33	U	34	G	35		cWW	cWw		cWW
200	IL_4KZD_003	4KZD	0.3786	0	Isolated non-canonical cWW pair	R	RNA (84-MER)	C	66	U	67	C	68	*	G	17	U	18	G	19		cWW	cWw		cWW
201	IL_3RG5_002	3RG5	0.4449	0	Isolated non-canonical cWW pair	B	Selenocysteine transfer RNA	C	66	U	67	U	67\|\|\|A	*	A	5\|\|\|B	U	6	G	7		cWW	cWw		cWW
202	IL_8G9Z_001	8G9Z	0.4644	0	Isolated non-canonical cWW pair	E	Selenocysteine transfer RNA	C	66\|\|A	U	67\|\|A	U	67\|\|A\|A	*	A	5\|\|A\|B	U	6\|\|A	G	7\|\|A		cWW	cWw		cWW
203	IL_1MZP_001	1MZP	0.4165	0	Isolated non-canonical cWW pair	B	fragment of 23S rRNA	C	50	U	51	U	52	*	A	4	U	5	G	6		cWW	cWw		cWW
204	IL_7A0S_078	7A0S	0.4610	0	Isolated non-canonical cWW pair	X	LSU rRNA	U	2211	U	2212	G	2213	*	C	2068	U	2069	G	2070		cWW	cWw		cWW
205	IL_7RQB_083	7RQB	0.5079	0	Isolated non-canonical cWW pair (H)	1A	LSU rRNA	U	2232	U	2233	G	2234	*	C	2085	U	2086	G	2087		cWW	cWw		cWW
206	IL_5J7L_326	5J7L	0.4642	0	Isolated non-canonical cWW pair	DA	LSU rRNA	U	2085	U	2086	G	2087	*	C	2232	U	2233	G	2234		cWW	cWw		cWW
207	IL_4V88_424	4V88	0.5065	0	Isolated non-canonical cWW pair	A6	SSU rRNA	U	748	U	749	U	750	*	A	799	U	800	G	801		cWW	cWw		cWW
208	IL_8C3A_431	8C3A	0.4864	0	Isolated non-canonical cWW pair	CM	SSU rRNA	U	733	U	734	U	735	*	A	783	U	784	G	785		cWW	cWw		cWW
209	IL_2ET8_004	2ET8	0.4279	0	Isolated non-canonical cWW pair	A+B	RNA (22-mer)	G	18	U	19	C	20	*	G	27	U	28	C	29		cWW	cWw		cWW
210	IL_3BNR_007	3BNR	0.4017	0	Isolated non-canonical cWW pair	D+C	A site of human mitochondrial ribosome, chain three	G	17	U	18	C	19	*	G	5	U	6	C	7		cWW	cWw		cWW
211	IL_7L0Z_001	7L0Z	0.4052	0	Isolated non-canonical cWW pair	G	RNA (69-MER)	C	58	U	59	C	60	*	G	10	U	11	G	12		cWW	cWw		cWW
212	IL_3BNT_001	3BNT	0.3760	0	Isolated non-canonical cWW pair	A	A site of human mitochondrial ribosome	G	18\|\|\|\|4_665	U	19\|\|\|\|4_665	C	20\|\|\|\|4_665	*	G	4	U	5	C	6		cWW	cWw		cWW
213	IL_3BNT_006	3BNT	0.3760	0	Isolated non-canonical cWW pair	A	A site of human mitochondrial ribosome	G	18	U	19	C	20	*	G	4\|\|\|\|4_665	U	5\|\|\|\|4_665	C	6\|\|\|\|4_665		cWW	cWw		cWW
214	IL_1U6B_005	1U6B	0.4163	0	Isolated non-canonical cWW pair	B	197-MER	C	100	U	101	U	102	*	A	117	U	118	G	119		cWW	cWw		cWW
215	IL_2O3V_004	2O3V	0.3634	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	19	U	20	C	21	*	G	28	U	29	C	30		cWW	cWw		cWW
216	IL_8C3A_406	8C3A	0.4086	0	Isolated non-canonical cWW pair	CM	SSU rRNA	A	204	U	205	U	206	*	A	255	C	256	U	257		cWW	cWW		cWW
217	IL_4V88_398	4V88	0.4490	0	Isolated non-canonical cWW pair	A6	SSU rRNA	A	257	C	258	U	259	*	A	206	U	207	U	208		cWW	cWW		cWW
218	IL_6SX2_001	6SX2	0.4509	0	Isolated non-canonical cWW pair	C+D	RNA (19-mer)	U	9	U	10	A	11	*	U	9	U	10	A	11		cWW	ncWw		cWW
219	IL_5AY2_001	5AY2	0.3652	0	Isolated non-canonical cWW pair	A+B	RNA (12-mer)	A	3	C	4	U	5	*	A	8	C	9	U	10		cWW			cWW
220	IL_5AY2_003	5AY2	0.3734	0	Isolated non-canonical cWW pair	B+A	RNA (12-mer)	A	3	C	4	U	5	*	A	8	C	9	U	10		cWW			cWW
221	IL_1ZH5_001	1ZH5	0.3786	0	Isolated non-canonical cWW pair	D+C	RNA (9-mer)	C	3	U	4	G	5	*	C	3	U	4	G	5		cWW	ncWw		cWW
222	IL_7ECO_006	7ECO	0.4076	0	Isolated non-canonical cWW pair	F+E	RNA (12-mer)	G	3	U	4	C	5	*	G	8	U	9	C	10		cWW			cWW
223	IL_4JGN_003	4JGN	0.3666	0	Isolated non-canonical cWW pair	E	RNA (20-mer)	C	511	U	512	G	513	*	C	511\|\|\|\|4_555	U	512\|\|\|\|4_555	G	513\|\|\|\|4_555		cWW	ncwW		cWW
224	IL_4J39_001	4J39	0.4081	0	Isolated non-canonical cWW pair	B	RNA (19-mer)	G	9\|\|\|\|4_555	C	10\|\|\|\|4_555	C	11\|\|\|\|4_555	*	G	9	C	10	C	11		cWW			cWW
225	IL_4KNQ_003	4KNQ	0.4179	0	Isolated non-canonical cWW pair	B	RNA (20-mer)	C	210	C	211	G	212	*	C	210\|\|\|\|4_555	C	211\|\|\|\|4_555	G	212\|\|\|\|4_555		cWW			cWW
226	IL_7ECO_005	7ECO	0.4087	0	Isolated non-canonical cWW pair	E+F	RNA (12-mer)	G	3	U	4	C	5	*	G	8	U	9	C	10		cWW			cWW
227	IL_7KFN_001	7KFN	0.4247	0	Isolated non-canonical cWW pair	B+C	Gli1 8AZ 23mer RNA + Gli1 1W5 23mer RNA	G	14	A	15	G	16	*	C	8	C	9	C	10		cWW	cWW		cWW
228	IL_5ED2_004	5ED2	0.4207	0	Isolated non-canonical cWW pair	E+F	RNA (23-mer)	G	14	A	15	G	16	*	C	8	C	9	C	10		cWW	cWW		cWW
229	IL_6IA2_002	6IA2	0.3822	0	Isolated non-canonical cWW pair	B+A	RNA (19-mer)	G	11\|\|A	A	12	G	13	*	C	7	C	8	C	9		cWW	cWW		cWW
230	IL_6IA2_005	6IA2	0.3746	0	Isolated non-canonical cWW pair	B+A	RNA (19-mer)	G	2	A	3	G	4	*	C	16	C	17	C	18		cWW	cWW		cWW
231	IL_8C3A_130	8C3A	0.3625	0	Isolated non-canonical cWW pair	1	LSU rRNA	C	3134	A	3135	C	3136	*	G	3249	C	3250	G	3251		cWW	ncWW		cWW
232	IL_4LFB_061	4LFB	0.3441	0	Isolated non-canonical cWW pair	A	SSU rRNA	G	1474	G	1475	G	1476	*	C	1424	U	1425	C	1426		cWW	ncWW		cWW
233	IL_3SZX_003	3SZX	0.3471	0	Isolated non-canonical cWW pair	B+A	RNA (19-mer)	C	7	U	8	G	9	*	C	13	U	14	G	15		cWW	ncWw		cWW
234	IL_8C3A_452	8C3A	0.3809	0	Isolated non-canonical cWW pair	CM	SSU rRNA	G	1198	U	1199	C	1200	*	G	1434	U	1435	U	1436		ncWW	ncWw		cWW
235	IL_4V88_446	4V88	0.3644	0	Isolated non-canonical cWW pair	A6	SSU rRNA	G	1213	U	1214	C	1215	*	G	1448	U	1449	U	1450		cWW	ncWw		cWW
236	IL_4P43_001	4P43	0.3819	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	42	U	43	C	44	*	G	5	U	6	C	7		cWW	cWw		cWW
237	IL_4P3U_006	4P3U	0.3862	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	19	U	20	C	21	*	G	28	U	29	C	30		cWW	cWw		cWW
238	IL_4P3U_007	4P3U	0.3381	0	Isolated non-canonical cWW pair	C+D	RNA (23-mer)	G	5	U	6	C	7	*	G	42	U	43	C	44		cWW	ncWw		cWW
239	IL_4K31_001	4K31	0.3764	0	Isolated non-canonical cWW pair	C+B	RNA (23-mer)	G	19	U	20	C	21	*	G	5	U	6	C	7		cWW	cWw		cWW
240	IL_4K31_004	4K31	0.3753	0	Isolated non-canonical cWW pair	B+C	RNA (23-mer)	G	19	U	20	C	21	*	G	5	U	6	C	7		cWW	cWw		cWW
241	IL_4KYY_001	4KYY	0.3493	0	Isolated non-canonical cWW pair	A+B	RNA 17-mer	G	5	U	6	U	7	*	A	11	U	12	C	13		cWW	cWw		cWW
242	IL_4KYY_003	4KYY	0.3370	0	Isolated non-canonical cWW pair	B+A	RNA 17-mer	G	5	U	6	U	7	*	A	11	U	12	C	13		cWW	cWw		cWW
243	IL_4P3T_006	4P3T	0.3402	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	28	U	29	C	30	*	G	19	U	20	C	21		cWW	cWw		cWW
244	IL_2OE8_001	2OE8	0.3613	0	Isolated non-canonical cWW pair	A+B	RNA (16-mer) + RNA (17-mer)	G	1405	U	1406	C	1407	*	G	1494	U	1495	C	1496		cWW	cWw		cWW
245	IL_2OE5_001	2OE5	0.3673	0	Isolated non-canonical cWW pair	A+B	RNA (16-mer) + RNA (17-mer)	G	1405	U	1406	C	1407	*	G	1494	U	1495	C	1496		cWW	cWw		cWW
246	IL_3TD0_006	3TD0	0.3683	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	19	U	20	C	21	*	G	28	U	29	C	30		cWW	cWw		cWW
247	IL_2O3Y_001	2O3Y	0.3494	0	Isolated non-canonical cWW pair	B+A	RNA (23-mer)	G	42	U	43	C	44	*	G	5	U	6	C	7		cWW	cWw		cWW
248	IL_5ZTM_002	5ZTM	0.3250	0	Isolated non-canonical cWW pair	C	non-coding mRNA sequence roX2	G	157	U	158	U	159	*	A	123	U	124	C	125		cWW	cWw		cWW
249	IL_3U4M_001	3U4M	0.3772	0	Isolated non-canonical cWW pair	B	LSU rRNA	C	2179	U	2180	U	2181	*	A	2108	U	2109	G	2110		cWW	cWw		cWW
250	IL_5B2P_001	5B2P	0.3466	0	Isolated non-canonical cWW pair	B	Guide RNA	G	48	U	49	A	50	*	U	24	U	25	C	26		cWW	cWw		cWW
251	IL_3BNR_012	3BNR	0.3295	0	Isolated non-canonical cWW pair	D+C	A site of human mitochondrial ribosome, chain three	G	3	U	4	C	5	*	G	19	U	20	C	21		cWW	cWw		cWW
252	IL_3BNN_005	3BNN	0.3335	0	Isolated non-canonical cWW pair	D+C	A site of human ribosome	G	17	U	18	C	19	*	G	3	U	4	C	5		cWW	cWw		cWW
253	IL_2O3Y_004	2O3Y	0.3230	0	Isolated non-canonical cWW pair	A+B	RNA (23-mer)	G	19	U	20	C	21	*	G	28	U	29	C	30		cWW	cWw		cWW
254	IL_3BNN_008	3BNN	0.3505	0	Isolated non-canonical cWW pair	D+C	A site of human ribosome	G	3	U	4	C	5	*	G	17	U	18	C	19		cWW	cWw		cWW
255	IL_4JGN_001	4JGN	0.3481	0	Isolated non-canonical cWW pair	E	RNA (20-mer)	C	505	U	506	G	507	*	C	517\|\|\|\|4_555	U	518\|\|\|\|4_555	G	519\|\|\|\|4_555		cWW	cWw		cWW
256	IL_4JGN_005	4JGN	0.3481	0	Isolated non-canonical cWW pair	E	RNA (20-mer)	C	505\|\|\|\|4_555	U	506\|\|\|\|4_555	G	507\|\|\|\|4_555	*	C	517	U	518	G	519		cWW	cWw		cWW
257	IL_1MFQ_002	1MFQ	0.3878	0	Isolated non-canonical cWW pair	A	SRP RNA	G	120	U	121	U	122	*	A	228	U	229	C	230		cWW	cWw		cWW
258	IL_5TBW_122	5TBW	0.3898	0	Isolated non-canonical cWW pair	1	LSU rRNA	U	3280	U	3281	U	3282	*	A	3168	U	3169	A	3170		cWW	cWw		cWW
259	IL_4WF9_017	4WF9	0.3262	0	Isolated non-canonical cWW pair	X	LSU rRNA	A	618	U	619	G	620	*	C	607	C	608	U	609		cWW	cWW		cWW
260	IL_5J7L_257	5J7L	0.3268	0	Isolated non-canonical cWW pair	DA	LSU rRNA	A	575	U	576	G	577	*	C	564	C	565	U	566		cWW	cWW		cWW
261	IL_7RQB_015	7RQB	0.3382	0		1A	LSU rRNA	A	575	U	576	G	577	*	C	564	C	565	U	566		cWW	cWW		cWW
262	IL_7A0S_011	7A0S	0.3036	0	Isolated non-canonical cWW pair	X	LSU rRNA	A	584	U	585	G	586	*	C	573	C	574	U	575		cWW	cWW		cWW
263	IL_4V88_426	4V88	0.4540	1	Isolated non-canonical cWW pair	A6	SSU rRNA	G	819	U	821	U	822	*	A	850	U	851	C	852		cWW	cWw		cWW
264	IL_4V88_457	4V88	0.6290	2	Isolated non-canonical cWW pair	A6	SSU rRNA	U	1369	U	1372	C	1373	*	G	1352	U	1353	G	1354		cWW	cWw		cWW
265	IL_5B2P_002	5B2P	0.6446	1	Isolated non-canonical cWW pair	B	Guide RNA	G	28	U	30	G	31	*	C	44	U	45	C	46		cWW	cWw		cWW
266	IL_8C3A_064	8C3A	0.6818	1	Isolated non-canonical cWW pair	1	LSU rRNA	U	1394	U	1396	G	1397	*	C	1406	U	1407	G	1408		cWW	cWw		cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GUC*GUC	41
CUG*CUG	37
CUG*CCG	9
GAG*CCC	8
CCG*CCG	8
CUU*AUG	6
GAC*GGC	5
GAC*GCC	5
AAU*ACU	5
GCC*GCC	5
CAC*GCG	4
AAC*GCU	4
ACU*ACU	4
GUU*AUC	4
AUG*CCU	4
GGG*CAC	3
GCC*GUC	3
AUU*ACU	3
GAU*ACC	3
UUU*AUA	3
CUC*GUG	3
UUG*CUG	3
UGC*GUG	2
GGC*GUC	2
UAG*CAG	2
CAU*AGUG	2
AAC*GGU	2
CGG*CAG	2
CAU*GGG	2
UAU*AGA	2
GGC*GGC	2
UAC*GAA	2
GAC*GAC	2
CAG*CAG	2
UCC*GAG	2
UCA*UCA	2
GGG*CUC	2
GCG*CCU	2
GUG*CUU	2
CUU*ACG	2
GUC*GCC	2
GUG*CUC	2
GCU*GUC	2
GGC*GCC	2
CAG*CCG	2
GAG*CCU	2
UUA*UUA	2
AUU*AUU	2
UUU*AUG	2
GUC*GUU	2
UAG*CCG	1
GGA*UUC	1
CUU*AGG	1
UGG*CAA	1
ACG*CAU	1
GAC*GCAGC	1
CAC*GGAG	1
CAC*GGG	1
GAU*AGC	1
CGA*UGG	1
ACG*CCU	1
CGG*CGG	1
GUU*GAC	1
CGU*GAG	1
GUU*AAU	1
GUC*GAU	1
UUU*GGA	1
CCU*AAG	1
GCU*GAU	1
UUC*GGA	1
UGG*UGG	1
UGC*GCG	1
CUA*UCG	1
CCC*GUG	1
GUG*CCC	1
UUG*CAG	1
UGC*GUA	1
CCU*ACG	1
UCG*CAA	1
GAAG*CCC	1
AAU*GUU	1
GGG*CUU	1
AUG*UUU	1
UUA*UUG	1
ACU*AUU	1
GUA*UUC	1
GUUU*AUC	1
UUAUC*GUG	1
GUUG*CUC	1
UUUG*CUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
U*U	112
A*C	34
C*C	23
U*C	22
A*G	13
G*U	9
A*A	8
G*A	7
C*U	7
C*A	6
G*G	5
U*A	4
U*G	3
G*C	3
UU*U	3
A*GU	2
A*CAG	1
A*GA	1
AA*C	1
A*U	1
UAU*U	1

Release history

Release	3.80	3.81	3.82	3.83
Date	2024-01-31	2024-02-28	2024-03-27	2024-04-24
Status	New id, > 2 parents	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Isolated non-canonical cWW pair (241)
(16)
Isolated cWH basepair (3)
Self complementary (2)
Isolated non-canonical cWW pair (H) (2)
Isolated tWW contact (1)
Other IL (1)
Basepair signature: cWW-cWW-cWW
Heat map statistics: Min 0.00 | Avg 0.32 | Max 0.88

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The Resolver thinks MMCif

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view

reading 354 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

2 models in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

354 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 28 ms

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2 models

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0 atoms selected

129 atoms selected

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69 atoms selected

40 atoms selected

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218 atoms selected

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Coloring options: Nucleotide numbers

Motif IL_95997.1 Version IL_95997.1 of this group appears in releases 3.80 to 3.83 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_95997.1 Version IL_95997.1 of this group appears in releases 3.80 to 3.83

Download

Csv

Json