1Y39 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1Y39_001 | 1/C/114:124 | No text annotation | geometric HL_5D8H_001 HL_20174.1 | |
| HL_1Y39_002 | 1/C/142:149 | GNRA with tandem sheared | geometric HL_1MMS_002 NA | |
| HL_1Y39_003 | 1/D/314:324 | No text annotation | geometric HL_5D8H_001 HL_20174.1 | |
| HL_1Y39_004 | 1/D/342:349 | GNRA with tandem sheared | geometric HL_1MMS_002 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1Y39_001 | 1/C/109:112, 1/C/126:129 | No text annotation | geometric IL_1MMS_001 NA | |
| IL_1Y39_002 | 1/C/137:141, 1/C/150:152 | Major groove platform with extra cWW | geometric IL_1MMS_002 NA | |
| IL_1Y39_003 | 1/D/309:312, 1/D/326:329 | No text annotation | geometric IL_1MMS_001 NA | |
| IL_1Y39_004 | 1/D/337:341, 1/D/350:352 | Major groove platform with extra cWW | geometric IL_1MMS_002 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_1Y39_001 | 1/C/105:107, 1/C/131:137, 1/C/152:154 | No text annotation | geometric J3_1MMS_001 NA | |
| J3_1Y39_002 | 1/D/305:307, 1/D/331:337, 1/D/352:354 | No text annotation | geometric J3_6PRV_001 J3_37832.1 |
Problematic loops
No problematic loops
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