5DAR Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5DAR_001 | 1/A/1174:1184 | No text annotation | homologous HL_5D8H_001 HL_20174.1 | |
| HL_5DAR_002 | 1/A/1202:1209 | GNRA wlth tandem sheared | homologous HL_5D8H_002 HL_98423.3 | |
| HL_5DAR_003 | 1/D/1174:1184 | No text annotation | homologous HL_5D8H_001 HL_20174.1 | |
| HL_5DAR_004 | 1/D/1202:1209 | GNRA wlth tandem sheared | homologous HL_5D8H_002 HL_98423.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5DAR_001 | 1/A/1153:1161, 1/A/1218:1222 | Kink-turn | homologous IL_4V9F_042 IL_99692.3 | |
| IL_5DAR_002 | 1/A/1169:1172, 1/A/1186:1189 | No text annotation | homologous IL_5D8H_002 IL_28482.1 | |
| IL_5DAR_003 | 1/A/1197:1201, 1/A/1210:1212 | Major groove platform with extra cWW | geometric IL_5D8H_003 IL_36931.2 | |
| IL_5DAR_004 | 1/D/1153:1161, 1/D/1218:1222 | Kink-turn | homologous IL_4V9F_042 IL_99692.3 | |
| IL_5DAR_005 | 1/D/1169:1172, 1/D/1186:1189 | No text annotation | homologous IL_5D8H_002 IL_28482.1 | |
| IL_5DAR_006 | 1/D/1197:1201, 1/D/1210:1212 | Major groove platform with extra cWW | geometric IL_5D8H_003 IL_36931.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5DAR_001 | 1/A/1165:1167, 1/A/1191:1197, 1/A/1212:1214 | No text annotation | homologous J3_5D8H_001 J3_37832.1 | |
| J3_5DAR_002 | 1/D/1165:1167, 1/D/1191:1197, 1/D/1212:1214 | No text annotation | homologous J3_5D8H_001 J3_37832.1 |
Problematic loops
No problematic loops
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