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Motif IL_89407.2 Version IL_89407.2 of this group appears in releases 3.15 to 3.15

#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3break 4 5 61-62-32-42-52-63-4
1 IL_4V9F_0624V9F0.75264Intercalated tWH0C2031U2032U2034*A1747U1748G1752cWWcWW
2 IL_4WF9_0654WF90.76374Intercalated tWHXC2017U2018U2020*A1713C1714G1718cWWcWW
3 IL_5J7L_3075J7L0.74904Intercalated tWHDAC1990U1991U1993*A1669C1670G1674cWWcWW
4 IL_2ET8_0032ET80.65811Decoding loop relatedB+AC29A30C31*G15A17G18cWWcWW
5 IL_4WZM_0014WZM0.54800Isolated cWH basepairC+BG917C918C919*G906G907C908cWWncWHcWW
6 IL_4J50_0034J500.62580Isolated cWH basepairB+AC7A8G9*C13A14G15cWWcWW
7 IL_4J50_0094J500.62580Isolated cWH basepairB+AC7||||3_555A8||||3_555G9||||3_555*C13||||3_555A14||||3_555G15||||3_555cWWcWW
8 IL_4J50_0064J500.62580Isolated cWH basepairB+AC7||||2_555A8||||2_555G9||||2_555*C13||||2_555A14||||2_555G15||||2_555cWWcWW
9 IL_4J50_0044J500.62600Isolated cWH basepairA+BC7||||2_555A8||||2_555G9||||2_555*C13||||2_555A14||||2_555G15||||2_555cWWcWW
10 IL_4J50_0014J500.62600Isolated cWH basepairA+BC7A8G9*C13A14G15cWWcWW
11 IL_4J50_0074J500.62600Isolated cWH basepairA+BC7||||3_555A8||||3_555G9||||3_555*C13||||3_555A14||||3_555G15||||3_555cWWcWW
12 IL_4IOA_0444IOA0.54090Isolated non-canonical cWW pair (H)XC1252C1253G1254*C1218C1219G1220cWWncBWcWW
13 IL_4V9F_0234V9F0.39340Isolated non-canonical cWW pair0C899U900G901*C763C764G765cWWcWWcWW
14 IL_5TBW_0085TBW0.42270Isolated non-canonical cWW pair1C125U126G127*C141C142G143cWWcWWcWW
15 IL_3RW6_0043RW60.36510Isolated non-canonical cWW pairHC33U34G35*C24C25G26cWWcWWcWW
16 IL_4V88_4554V880.43061Isolated non-canonical cWW pairA6C1339A1341C1342*G1383A1384G1385cWWncwWcWW
17 IL_5M0H_0025M0H0.48812Multiple bulged bases, near cWWAG8U11C12*G34A35C36ncWWcWWcWW
18 IL_5J7L_0085J7L0.38901Single bulged G, near cWWAAU92U93C95*G75G76A77cWWncWWancWW
19 IL_3TD0_0053TD00.32851Isolated non-canonical cWW pairA+BG16A17G19*C30G31C32cWWcWWcWW
20 IL_3TD0_0023TD00.32801Isolated non-canonical cWW pairB+AG39A40G42*C7G8C9cWWcWWcWW
21 IL_1XJR_0031XJR0.35541Isolated non-canonical cWW pairAG32G34G35*C16A17C18cWWcWWcWW
22 IL_4ZC7_0024ZC70.46550B+AA39A40G42*C7G8U9cWWncWWcWW
23 IL_1MFQ_0031MFQ0.35530Isolated non-canonical cWW pairAA163G164G165*U132A133U134cWWncWWcWW
24 IL_1NBS_0061NBS0.32200BG116U117C118*G125G126C127cWWncWWcWW
25 IL_4IOA_0794IOA0.36270XG2078A2079U2080*A2175U2176U2177cWWncWWcWW
26 IL_4M6D_0114M6D0.38050Isolated non-canonical cWW pairHG12G13C14*G46A47C48cWWcWWncWW
27 IL_4M4O_0024M4O0.31830Isolated non-canonical cWW pairBG12G13C14*G46A47C48cWWcWWcWW
28 IL_3HHN_0043HHN0.35230Isolated non-canonical cWW pairEG87G88U89*A102A103C104cWWcWWcWW
29 IL_5TBW_0685TBW0.37020Isolated non-canonical cWW pair1G1661G1662C1663*G1786A1787C1788cWWcWWcWW
30 IL_4IOA_0194IOA0.33490Isolated non-canonical cWW pair (H)XG754C755C756*G767U768C769cWWcWWcWW
31 IL_5TBW_0215TBW0.40080Isolated non-canonical cWW pair1G668U669C670*G792C793U794cWWcWWcWW
32 IL_5UNE_0075UNE0.39480Isolated non-canonical cWW pairB+AG12G13C14*G31G32C33ncWWcWW
33 IL_5UNE_0035UNE0.37640Isolated non-canonical cWW pairA+BG12G13C14*G31G32C33cWWcWW
34 IL_4KR9_0014KR90.37560MG28U29C30*G6A7U8cWWcWWcWW
35 IL_4KR9_0024KR90.37640XG28U29C30*G6A7U8cWWcWWcWW
36 IL_5AY2_0035AY20.31220Isolated non-canonical cWW pairA+BA8C9U10*A3C4U5cWWcWW
37 IL_5AY2_0015AY20.31640Isolated non-canonical cWW pairA+BA3C4U5*A8C9U10cWWcWW
38 IL_5E81_3715E810.32970Self complementary1KA41A42U43*G27U28U29cWWcWWncWW
39 IL_4V84_0714V840.41780AVG6183A6184U6185*G6192U6193C6194cWWncWWncWWcWW
40 IL_5E81_3765E810.287403LG27U28U29*A41A42U43ncWWncWWcWW
41 IL_5ZEI_0015ZEI0.20320B+AG42U43C44*G5U6C7cWWncwWcWW
42 IL_5ZEI_0045ZEI0.20590A+BG19U20C21*G28U29C30cWWcwWcWW
43 IL_5Z1I_0015Z1I0.24120Isolated non-canonical cWW pairAG19||||8_555U20||||8_555C21||||8_555*G5U6C7cWWcwWcWW
44 IL_5Z1I_0045Z1I0.24120Isolated non-canonical cWW pairAG19U20C21*G5||||8_555U6||||8_555C7||||8_555cWWcwWcWW
45 IL_4ZC7_0044ZC70.26470Isolated non-canonical cWW pairA+BG19U20C21*G28U29C30cWWncWwcWW
46 IL_1ZZ5_0041ZZ50.28860Isolated non-canonical cWW pairC+DG10U11C12*G24U25C26cWWncWwcWW
47 IL_1ZZ5_0021ZZ50.32330Isolated non-canonical cWW pairA+BG10U11C12*G24U25C26cWWncWwcWW
48 IL_5ZEJ_0015ZEJ0.25310B+AG42U43C44*G5U6C7cWWncwWcWW
49 IL_4V88_3854V880.27150Isolated non-canonical cWW pairA6U35C36U37*A471U472A473cWWcWWcWW
50 IL_1N33_0701N330.34080Z+YU1U2U3*G34G35A36cWWncWWacWW
51 IL_2R8S_0012R8S0.30290Isolated non-canonical cWW pairRC208A210C211*G110G111G112cWWcWWcWW
52 IL_5TBW_0425TBW0.31210Isolated non-canonical cWW pair1A1009G1010A1011*U1039A1040U1041cWWcWWcWW
53 IL_4LFB_0064LFB0.29970Isolated non-canonical cWW pairAC99A101G102*C67G68G69cWWcWWcWW
54 IL_5UNE_0015UNE0.32420Isolated non-canonical cWW contactA+BU7G8A9*U39G40G41cWWncwWcWW
55 IL_5TBW_0275TBW0.30930Isolated non-canonical cWW pair1C803C804G805*C938U939G940cWWcWWcWW
56 IL_4WF9_0204WF90.26590Isolated non-canonical cWW pairXC717C718G719*C851U852G853cWWcWWcWW
57 IL_4IOA_0134IOA0.27240XU685C686G687*C819U820A821cWWcWWcWW
58 IL_5J7L_2595J7L0.26210Isolated non-canonical cWW pairDAC672C673G674*C806U807G808cWWcWWcWW
59 IL_4Y4O_1944Y4O0.254202AC672C673G674*C806U807G808cWWcWWcWW
60 IL_2Q1R_0022Q1R0.23810AU1008A1009G1010*C1003||||2_755G1004||||2_755A1005||||2_755cWWcWWcWW
61 IL_1RPU_0011RPU0.24540Isolated non-canonical cWW pairC+DU9||AC10||AA11||A*U9||AC10||AA11||AcWWncWBcWW
62 IL_3GLP_0023GLP0.22500B+AC2||AU3||AG4*C5U6G7cWWncwW
63 IL_4E48_0034E480.20550Isolated non-canonical cWW pairA+BC8U9G10*C31U32G33cWWcWW
64 IL_5MWI_0065MWI0.20910Isolated non-canonical cWW pairAC17U18G19*C8||||4_555U9||||4_555G10||||4_555cWWcWW
65 IL_5MWI_0035MWI0.20910Isolated non-canonical cWW pairAC17||||4_555U18||||4_555G19||||4_555*C8U9G10cWWcWW
66 IL_4E48_0054E480.24870Isolated non-canonical cWW pairA+BC14U15G16*C25U26G27cWWcWW
67 IL_4E59_0034E590.19390B+AC2||||3_555C3||||3_555G4||||3_555*C2||||3_555C3||||3_555G4||||3_555cWWncWBcWW
68 IL_4E59_0014E590.19390Isolated non-canonical cWW pairB+AC2C3G4*C2C3G4cWWncWBcWW
69 IL_4E59_0024E590.19390B+AC2||||2_555C3||||2_555G4||||2_555*C2||||2_555C3||||2_555G4||||2_555cWWncWBcWW
70 IL_3GM7_0023GM70.19220Isolated non-canonical cWW pairG+HC4U5G6*C13U14G15cWWcWW
71 IL_3GM7_0043GM70.21130Isolated non-canonical cWW pairG+HC10U11G12*C7U8G9cWWncwWcWW
72 IL_5VCI_0025VCI0.20260Isolated non-canonical cWW pairB+AC7U8G9*C4U5G6cWWncwWcWW
73 IL_3GM7_0063GM70.16560Isolated non-canonical cWW pairG+HC16U17G18*C1U2G3cWWncwWcWW
74 IL_3GM7_0033GM70.18330Isolated non-canonical cWW pairH+GC10U11G12*C7U8G9cWWncwWcWW
75 IL_1UN6_0051UN60.18840Isolated non-canonical cWW pairFC79U80G81*C95U96G97cWWncwWcWW
76 IL_4E48_0044E480.22510Isolated non-canonical cWW pairB+AC28U29G30*C11U12G13cWWncwWcWW
77 IL_4E48_0024E480.22510Isolated non-canonical cWW pairB+AC34U35G36*C5U6G7cWWcWW
78 IL_4E48_0014E480.22760Isolated non-canonical cWW pairA+BC2U3G4*C37U38G39cWWcWW
79 IL_3SZX_0013SZX0.21440Isolated non-canonical cWW pairA+BC7U8G9*C13U14G15cWWcWW
80 IL_5MWI_0025MWI0.21680Isolated non-canonical cWW pairAC20||||4_555U21||||4_555G22||||4_555*C5U6G7cWWcWW
81 IL_5MWI_0075MWI0.21680Isolated non-canonical cWW pairAC20U21G22*C5||||4_555U6||||4_555G7||||4_555cWWcWW
82 IL_5MWI_0055MWI0.25410Isolated non-canonical cWW pairAC14U15||AG16*C11||||4_555U12||A||4_555G13||||4_555cWWcWW
83 IL_5MWI_0045MWI0.25410Isolated non-canonical cWW pairAC14||||4_555U15||A||4_555G16||||4_555*C11U12||AG13cWWcWW
84 IL_3GM7_0053GM70.25150Isolated non-canonical cWW pairG+HC13U14G15*C4U5G6cWWcWW
85 IL_2ZKO_0012ZKO0.18820Isolated non-canonical cWW pairD+CU9U10A11*U9U10A11cWWcWW
86 IL_3GM7_0013GM70.17580Isolated non-canonical cWW pairH+GC16U17G18*C1U2G3cWWcWW
87 IL_5ED2_0045ED20.15880Isolated non-canonical cWW pairF+EC8C9C10*G14A15G16cWWcWWcWW
88 IL_4LFB_0614LFB0.18550Isolated non-canonical cWW pairAC1424U1425C1426*G1474G1475G1476cWWncWWcWW
89 IL_4IOA_0304IOA0.22100Isolated non-canonical cWW pairXU974C975C976*G963A964G965cWWcWWcWW
90 IL_1ZH5_0011ZH50.22610Isolated non-canonical cWW pairC+DC3U4G5*C3U4G5cWWncwWcWW
91 IL_3SZX_0023SZX0.20890Isolated non-canonical cWW pairA+BC10U11G12*C10U11G12cWWncWwcWW
92 IL_4JGN_0024JGN0.16470Isolated non-canonical cWW pairEC508U509G510*C514||||4_555U515||||4_555G516||||4_555cWWncwWcWW
93 IL_4JGN_0044JGN0.16470Isolated non-canonical cWW pairEC508||||4_555U509||||4_555G510||||4_555*C514U515G516cWWncwWcWW
94 IL_4KNQ_0044KNQ0.18280Isolated non-canonical cWW pairBC207||||4_555C208||||4_555G209||||4_555*C213C214G215cWWcWW
95 IL_4KNQ_0024KNQ0.18280Isolated non-canonical cWW pairBC207C208G209*C213||||4_555C214||||4_555G215||||4_555cWWcWW
96 IL_4E48_0064E480.18230Isolated non-canonical cWW pairB+AC22U23G24*C17U18G19cWWncwWcWW
97 IL_4KNQ_0014KNQ0.17180Isolated non-canonical cWW pairBC216||||4_555C217||||4_555G218||||4_555*C204C205G206cWWcWwcWW
98 IL_4KNQ_0054KNQ0.17180Isolated non-canonical cWW pairBC216C217G218*C204||||4_555C205||||4_555G206||||4_555cWWcWwcWW
99 IL_4JGN_0014JGN0.13220Isolated non-canonical cWW pairEC517||||4_555U518||||4_555G519||||4_555*C505U506G507cWWcwWcWW
100 IL_4JGN_0054JGN0.13220Isolated non-canonical cWW pairEC517U518G519*C505||||4_555U506||||4_555G507||||4_555cWWcwWcWW
101 IL_4P3T_0054P3T0.00001Isolated non-canonical cWW pairB+AC30C31C32*G16A18G19cWWcWWcWW
102 IL_4TS2_0044TS20.17130Isolated non-canonical cWW pairY+XC77U78C79*G20U21G22cWWcwWcWW
103 IL_4Y1M_0054Y1M0.22920Isolated non-canonical cWW pairBU4U5U6*A103U104A105cWWncwWcWW
104 IL_4V88_4654V880.27340Isolated non-canonical cWW pairA6G1757U1758C1759*G1642U1643C1644cWWcWW
105 IL_5M0H_0015M0H0.33981Other ILAA4A5U7*A37U38U39cWWcWW
106 IL_4IOA_0104IOA0.32900Isolated non-canonical cWW pair (H)XA584U585G586*C573C574U575cWWcWWcWW
107 IL_5J7L_2575J7L0.31070Isolated non-canonical cWW pairDAA575U576G577*C564C565U566cWWcWWcWW
108 IL_4Y4O_1924Y4O0.314202AA575U576G577*C564C565U566cWWcWWcWW
109 IL_4WF9_0174WF90.26360Isolated non-canonical cWW pairXA618U619G620*C607C608U609cWWcWWcWW
110 IL_4V88_3984V880.26560Isolated non-canonical cWW pairA6A206U207U208*A257C258U259cWWcWWcWW
111 IL_4V83_2354V830.29800Isolated non-canonical cWW pairCVG6173U6174G6175*C6153U6154C6155cWWncwWcWW
112 IL_4YHW_0014YHW0.23860Isolated non-canonical cWW pairC+EA11C12G13*C68C69U70cWWcWW
113 IL_4WF9_0424WF90.23920Isolated non-canonical cWW pairXG1081C1082G1083*C1160A1161C1162cWWncWWcWW
114 IL_4IOA_0254IOA0.23980XA936C937G938*C864A865U866cWWcWWcWW
115 IL_4P3U_0124P3U0.19760Isolated non-canonical cWW pairC+DG19U20C21*G28U29C30cWWncwWcWW
116 IL_4V88_4674V880.22460Isolated non-canonical cWW pairA6G1748A1749A1750*U1650A1651C1652cWWcwWcWW
117 IL_5ED1_0025ED10.23110Isolated non-canonical cWW pairC+BG9A10C11*G13A14C15cWWcwWcWW
118 IL_1KFO_0031KFO0.19460Isolated non-canonical cWW pairAC6||||8_555C7||||8_555U8||||8_555*G11A12G13cWWcWWcWW
119 IL_1KFO_0021KFO0.19460Isolated non-canonical cWW pairAC6C7U8*G11||||8_555A12||||8_555G13||||8_555cWWcWWcWW
120 IL_2ZNI_0012ZNI0.21590CU39U40C41*G29G30A31cWWncWWacWW
121 IL_4ZC7_0014ZC70.22530Isolated non-canonical cWW pairB+AG42U43C44*G5U6C7cWWncWwcWW
122 IL_3LA5_0013LA50.24760AU16U17C18*G78G79A80cWWncWWcWW
123 IL_3TD0_0013TD00.22160Isolated non-canonical cWW pairB+AG42U43C44*G5U6C7cWWncwWcWW
124 IL_1ZX7_0061ZX70.23150Isolated non-canonical cWW pairE+FG10U11C12*G24U25C26cWWcwWcWW
125 IL_5TBW_1125TBW0.22680Isolated non-canonical cWW pair1A2926C2927C2928*G2918A2919U2920cWWcWWcWW
126 IL_1YZ9_0021YZ90.16630Isolated non-canonical cWW pairF+EA15C16U17*A4C5U6cWWncWBcWW
127 IL_1YZ9_0011YZ90.17350Isolated non-canonical cWW pairC+DA4C5U6*A15C16U17cWWncWBcWW
128 IL_4V88_4174V880.20230Isolated non-canonical cWW pairA6G624C625U626*A973A974C975cWWcWWcWW
129 IL_5CCB_0025CCB0.22150NA31||||7_555C32||||7_555U33||||7_555*A37||||7_555A38||||7_555U39||||7_555cWWcWWcWW
130 IL_5CCB_0015CCB0.22150Isolated non-canonical cWW pairNA31C32U33*A37A38U39cWWcWWcWW
131 IL_1Z7F_0021Z7F0.19940Isolated non-canonical cWW pairAA5||||6_765C6||||6_765U7||||6_765*A10A11U12cWWcWWcWW
132 IL_5TBW_0795TBW0.23060Isolated non-canonical cWW pair1G1940C1941U1942*A2106A2107C2108cWWcWWcWW
133 IL_5Y85_0065Y850.26030Isolated non-canonical cWW pairD+CG4C5C6*G13A14C15cWWcWWcWW
134 IL_3MEI_0023MEI0.24880Isolated non-canonical cWW pairB+AG13C14C15*G8C9C10cWWncWBcWW
135 IL_5Y7M_0075Y7M0.25460Isolated non-canonical cWW pairDA11C12C13*G37A38U39cWWcWWcWW
136 IL_4V88_4464V880.27920Isolated non-canonical cWW pairA6G1448U1449U1450*G1213U1214C1215cWWncwWcWW
137 IL_1T0E_0021T0E0.26150Isolated non-canonical cWW pairA+CG10||AU11C12*G14U15C16cWWcwWcWW
138 IL_1ZX7_0041ZX70.25480Isolated non-canonical cWW pairC+DG10U11C12*G24U25C26cWWcwWcWW
139 IL_4P43_0044P430.21070Isolated non-canonical cWW pairA+BG19U20C21*G28U29C30cWWcwWcWW
140 IL_5B2P_0015B2P0.18340Isolated non-canonical cWW pairBU24U25C26*G48U49A50cWWcwWcWW
141 IL_5TBW_1155TBW0.14170Isolated non-canonical cWW pair1A3012U3013U3014*A3040U3041U3042cWWcwWcWW
142 IL_2O3V_0042O3V0.16390Isolated non-canonical cWW pairB+AG28U29C30*G19U20C21cWWcwWcWW
143 IL_3BNR_0073BNR0.18540Isolated non-canonical cWW pairC+DG5U6C7*G17U18C19cWWcwWcWW
144 IL_5ZEG_0055ZEG0.18000CG5U6C7*G19||||2_555U20||||2_555C21||||2_555cWWcwWcWW
145 IL_5ZEG_0085ZEG0.18000CG5||||2_555U6||||2_555C7||||2_555*G19U20C21cWWcwWcWW
146 IL_5WTI_0025WTI0.17650Isolated non-canonical cWW pairBG10U11C12*G18U19C20cWWcwWcWW
147 IL_2O3V_0012O3V0.18590Isolated non-canonical cWW pairA+BG5U6C7*G42U43C44cWWcwWcWW
148 IL_5ZEG_0045ZEG0.18750B+AG28U29C30*G19U20C21cWWcwWcWW
149 IL_2O3X_0042O3X0.25150Isolated non-canonical cWW pairB+AG28U29C30*G19U20C21cWWcwWcWW
150 IL_1MFQ_0021MFQ0.21510Isolated non-canonical cWW pairAA228U229C230*G120U121U122cWWcwWcWW
151 IL_4NGF_0024NGF0.24930Isolated non-canonical cWW pairG+HG7U8C9*G7U8C9cWWncwWcWW
152 IL_5ZEJ_0045ZEJ0.22730A+BG19U20C21*G28U29C30cWWncwWcWW
153 IL_4P3U_0074P3U0.23180Isolated non-canonical cWW pairD+CG42U43C44*G5U6C7cWWncwWcWW
154 IL_4P3U_0064P3U0.21210Isolated non-canonical cWW pairB+AG28U29C30*G19U20C21cWWcwWcWW
155 IL_5ZEG_0015ZEG0.18140B+AG42U43C44*G5U6C7cWWcwWcWW
156 IL_3TD0_0063TD00.19020Isolated non-canonical cWW pairB+AG28U29C30*G19U20C21cWWcwWcWW
157 IL_2OE5_0012OE50.20690Isolated non-canonical cWW pairB+AG1494U1495C1496*G1405U1406C1407cWWcwWcWW
158 IL_2OE8_0012OE80.20850Isolated non-canonical cWW pairB+AG1494U1495C1496*G1405U1406C1407cWWcwWcWW
159 IL_2O3Y_0012O3Y0.18920Isolated non-canonical cWW pairA+BG5U6C7*G42U43C44cWWcwWcWW
160 IL_4P3T_0064P3T0.21460Isolated non-canonical cWW pairA+BG19U20C21*G28U29C30cWWcwWcWW
161 IL_2O3Y_0042O3Y0.20770Isolated non-canonical cWW pairB+AG28U29C30*G19U20C21cWWcwWcWW
162 IL_3BNN_0083BNN0.21100Isolated non-canonical cWW pairC+DG17U18C19*G3U4C5cWWcwWcWW
163 IL_3BNR_0123BNR0.22040Isolated non-canonical cWW pairC+DG19U20C21*G3U4C5cWWcwWcWW
164 IL_3BNN_0053BNN0.23540Isolated non-canonical cWW pairC+DG3U4C5*G17U18C19cWWcwWcWW
165 IL_4KYY_0034KYY0.21210Isolated non-canonical cWW pairA+BA11U12C13*G5U6U7cWWcwWcWW
166 IL_4KYY_0014KYY0.18240Isolated non-canonical cWW pairB+AA11U12C13*G5U6U7cWWcwWcWW
167 IL_4P3T_0014P3T0.16840Isolated non-canonical cWW pairA+BG5U6C7*G42U43C44cWWncwWcWW
168 IL_4K31_0014K310.23460Isolated non-canonical cWW pairB+CG5U6C7*G19U20C21cWWcwWcWW
169 IL_4K31_0044K310.23760Isolated non-canonical cWW pairC+BG5U6C7*G19U20C21cWWcwWcWW
170 IL_4P43_0014P430.27440Isolated non-canonical cWW pairA+BG5U6C7*G42U43C44cWWcwWcWW
171 IL_5J7L_0505J7L0.34030Isolated non-canonical cWW pairAAG1061U1062C1063*G1193U1194C1195cWWcwWcWW
172 IL_4LFB_0474LFB0.31580Isolated non-canonical cWW pairAG1061U1062C1063*G1193U1194C1195cWWcwWcWW
173 IL_2ET8_0042ET80.23920Isolated non-canonical cWW pairB+AG27U28C29*G18U19C20cWWcwWcWW
174 IL_3BNT_0013BNT0.20500Isolated non-canonical cWW pairAG4U5C6*G18||||4_665U19||||4_665C20||||4_665cWWcwWcWW
175 IL_3BNT_0063BNT0.20500Isolated non-canonical cWW pairAG4||||4_665U5||||4_665C6||||4_665*G18U19C20cWWcwWcWW
176 IL_4KZD_0034KZD0.22310Isolated non-canonical cWW pairRG17U18G19*C66U67C68cWWcwWcWW
177 IL_4ZDO_0014ZDO0.21160Isolated non-canonical cWW pair (H)EA5||A|CU6||AG7||A*C65||AU66||AU67||A|AcWWcwWcWW
178 IL_3RG5_0023RG50.23570Isolated non-canonical cWW pairBA5|||BU6G7*C66U67U67|||AcWWcwWcWW
179 IL_3RG5_0033RG50.23570BA5|||B|1_556U6||||1_556G7||||1_556*C66||||1_556U67||||1_556U67|||A|1_556cWWcwWcWW
180 IL_1MZP_0011MZP0.22870Isolated non-canonical cWW pairBA4U5G6*C50U51U52cWWcwWcWW
181 IL_5MWI_0015MWI0.18820Isolated non-canonical cWW pairAC23||||4_555U24||||4_555G25||||4_555*C2U3G4cWWcwWcWW
182 IL_5MWI_0085MWI0.18820Isolated non-canonical cWW pairAC23U24G25*C2||||4_555U3||||4_555G4||||4_555cWWcwWcWW
183 IL_5VCI_0015VCI0.20740Isolated non-canonical cWW pairB+AC10U11G12*C1U2G3cWWcwWcWW
184 IL_4PCJ_0014PCJ0.21320Isolated non-canonical cWW pairAC33U34G35*C1U2G3cWWcwWcWW
185 IL_4V88_4264V880.24241Isolated non-canonical cWW pairA6A850U851C852*G819U821U822cWWcwWcWW
186 IL_5TBW_0165TBW0.22260Isolated non-canonical cWW pair1A628U629A630*U429U430U431cWWcWW
187 IL_1U9S_0071U9S0.21410Isolated non-canonical cWW pairAG177C178G179*C191A192C193cWWcWWcWW
188 IL_5AOX_0015AOX0.23590Isolated non-canonical cWW pairCG9C10G11*C18A19C20cWWcWWcWW
189 IL_5TBW_0345TBW0.15910Isolated non-canonical cWW pair1A965U966A967*U954U955U956cWWcwWcWW
190 IL_5TBW_1225TBW0.21350Isolated non-canonical cWW pair1A3168U3169A3170*U3280U3281U3282cWWcwWcWW
191 IL_4V9F_0474V9F0.20060Isolated non-canonical cWW pair0G1349U1350G1351*C1303U1304C1305cWWcwWcWW
192 IL_3U4M_0013U4M0.16100Isolated non-canonical cWW pairBA2108U2109G2110*C2179U2180U2181cWWcwWcWW
193 IL_5OB3_0015OB30.23180AG10U11G12*C58U59C60cWWcwWcWW
194 IL_1U6B_0051U6B0.19930Isolated non-canonical cWW pairBA117U118G119*C100U101U102cWWcwWcWW
195 IL_4V9F_1054V9F0.19980Isolated non-canonical cWW pair9C107C108G109*C72A73G74cWWcWWcWW
196 IL_4WF9_0834WF90.18580Isolated non-canonical cWW pairXA2260A2261G2262*C2111C2112U2113cWWncWWacWW
197 IL_4V9F_0174V9F0.24810Isolated non-canonical cWW pair0A597C598G599*C558U559U560cWWcWWcWW
198 IL_4LFB_0104LFB0.26810Isolated non-canonical cWW pairAG190|||KU190|||LG191*C186C187C188cWWcWWcWW
199 IL_5TBW_1275TBW0.30330Isolated non-canonical cWW pair1G3252G3253G3254*C3233A3234C3235cWWcWWcWW
200 IL_3DIL_0063DIL0.27190Isolated non-canonical cWW pairAG115G116G117*C137A138C139cWWcWWcWW
201 IL_3D0U_0063D0U0.25040Isolated non-canonical cWW pairAG112G113G114*C134A135C136cWWcWWcWW
202 IL_5MSF_0055MSF0.25061RG3||||P_PG4||||P_PG6||||P_P*C13||||P_PA14||||P_PC15||||P_P
203 IL_5MSF_0015MSF0.25061Isolated non-canonical cWW pairRG3||||P_1G4||||P_1G6||||P_1*C13||||P_1A14||||P_1C15||||P_1cWWcWWcWW
204 IL_5TBW_3785TBW0.31101Isolated non-canonical cWW pairASA84G85G87*C94A95U96cWWcWWcWW
205 IL_5TBW_0445TBW0.42280Isolated non-canonical cWW pair1G1087U1088G1089*C1069U1070U1071cWWncWwcWW
206 IL_4V88_4444V880.36910Isolated non-canonical cWW pairA6G1464C1465G1466*C1173C1174U1175cWWncBWcWW
207 IL_4LFB_0594LFB0.37710Isolated non-canonical cWW pairAG1486G1487G1488*C1412A1413U1414cWWcWWcWW
208 IL_5J7L_0615J7L0.34490Isolated non-canonical cWW pairAAG1486G1487G1488*C1412A1413U1414cWWcWWcWW
209 IL_5TBW_1105TBW0.34000Isolated non-canonical cWW pair1G2912C2913G2914*C2889A2890U2891cWWncWWacWW
210 IL_4AOB_0104AOB0.32360AG71||||7_555A72||||7_555G73||||7_555*C78||||7_555G79||||7_555U80||||7_555cWWncWWcWW
211 IL_4AOB_0054AOB0.32360Isolated non-canonical cWW pairAG71A72G73*C78G79U80cWWncWWcWW
212 IL_353D_001353D0.30010A+BG8U9G10*U15G16C17cWWncWWacWW
213 IL_4Y4O_2114Y4O0.33360Isolated non-canonical cWW pair2AG952A953G954*U963C964C965cWWcWWcWW
214 IL_5UNE_0095UNE0.31970Isolated non-canonical cWW contactA+BU39G40G41*U7G8A9cWWncWW
215 IL_3SZX_0033SZX0.32850Isolated non-canonical cWW pairB+AC7U8G9*C13U14G15cWWncWwcWW
216 IL_4V9K_0644V9K0.35360Isolated non-canonical cWW pairAWC50A51G52*C62C63G64cWWncWWacWW
217 IL_4J50_0054J500.35660B+AC10||||2_555A11||||2_555G12||||2_555*C10||||2_555A11||||2_555G12||||2_555cWWcWW
218 IL_4J50_0024J500.35660Isolated non-canonical cWW pairB+AC10A11G12*C10A11G12cWWcWW
219 IL_4J50_0084J500.35660B+AC10||||3_555A11||||3_555G12||||3_555*C10||||3_555A11||||3_555G12||||3_555cWWcWW
220 IL_4V88_4194V880.40300Isolated non-canonical cWW pairA6C686G687G688*C646G647G648cWWcWW
221 IL_5J7L_2735J7L0.36470Isolated non-canonical cWW pairDAU870U871U872*A905U906G907cWWcwWcWW
222 IL_4V88_4334V880.30750Isolated non-canonical cWW pairA6U893U894G895*U917U918A919cWWcwWncWW
223 IL_1Y27_0011Y270.31690Isolated non-canonical cWW pairXU25C26G27*C43A44A45cWWcWWcWW
224 IL_3ICQ_0033ICQ0.25900EU68U69C70*G3G4A5cWWncWWcWW
225 IL_5UNE_0045UNE0.40890Isolated non-canonical cWW pairB+AC27A28G29*U16A17G18cWWcwWcWW
226 IL_4V8Q_1884V8Q0.32840BYC20A21G22*U56U57G58cWWncWWncWW
227 IL_4V88_4244V880.33310Isolated non-canonical cWW pairA6A799U800G801*U748U749U750cWWcwWcWW
228 IL_4Y4O_2564Y4O0.361602AC2085U2086G2087*U2232U2233G2234cWWcwWcWW
229 IL_5J7L_3265J7L0.35180Isolated non-canonical cWW pairDAC2232U2233G2234*U2085U2086G2087cWWcwWcWW
230 IL_4IOA_0784IOA0.36830Isolated non-canonical cWW pair (H)XC2068U2069G2070*U2211U2212G2213cWWcwWcWW
231 IL_4KYY_0024KYY0.41840Isolated non-canonical cWW pairA+BU8U9G10*U8U9G10cWWcWW
232 IL_4V88_4704V880.33430Isolated non-canonical cWW pairA6U1734U1735G1736*U1665U1666A1667cWWcWW
233 IL_4IOA_1094IOA0.38210Isolated non-canonical cWW pair (H)YC97C98G99*U82C83G84cWWcWBcWW
234 IL_3GLP_0013GLP0.31840B+AC5||AU6G7*C2U3G4cWWcWW
235 IL_4WF9_0554WF90.33980XC1622U1623C1624*G1465G1466G1467cWWcWW
236 IL_4M4O_0014M4O0.35460Isolated non-canonical cWW pairBC6A7U8*A52C53G54cWWcWWacWW
237 IL_4P3U_0014P3U0.28720Isolated non-canonical cWW pairB+AG42U43C44*G5U6C7cWWcWW
238 IL_5UNE_0065UNE0.42030Isolated non-canonical cWW pairA+BC27A28G29*U16A17G18cWWcwWcWW
239 IL_1WNE_0011WNE0.46700C+BG917C918C919*G906G907C908cWWcWW
240 IL_4IOA_0544IOA0.51451XG1573A1574G1576*U1447A1448C1449cWWncWwcWW
241 IL_4V88_4754V880.46020A6G1715C1716G1717*U1684G1685C1686cWWncWWcWW
242 IL_4V88_4574V880.50382Isolated non-canonical cWW pairA6G1352U1353G1354*U1369U1372C1373cWWcwWcWW
243 IL_364D_004364D0.56690Self complementaryB+CG79U80G81*U95G96C97cWWncWWcWW
244 IL_3KTW_0023KTW0.48921Isolated non-canonical cWW with bulgesCA177U178C180*G152G153U154cWWncSHcWWncWW
245 IL_5ML7_0105ML70.47331Isolated non-canonical cWW with bulgesBG2196C2197A2199*U2181A2182C2183cWWcWWcWW
246 IL_4IOA_1044IOA0.57941YG66C67G69*C19A20C21cWWcWWcWW
247 IL_4V9F_0974V9F0.51181Isolated non-canonical cWW with bulges0G2900C2901C2903*G2855A2856C2857cWWncWWcWW
248 IL_5TBW_1085TBW0.58242Isolated non-canonical cWW with bulges1G2943U2944G2947*C2879U2880C2881cWWcwWcWW
249 IL_4IOA_0914IOA0.56922Isolated non-canonical cWW with bulges (H)XG2553C2554G2557*C2489U2490C2491cWWncWWcWW
250 IL_4Y4O_2724Y4O0.54862Isolated non-canonical cWW with bulges (H)2AG2574C2575G2578*C2510U2511C2512cWWncWWcWW
251 IL_5J7L_3405J7L0.55452Isolated non-canonical cWW with bulgesDAG2574C2575G2578*C2510U2511C2512cWWncWWcWW
252 IL_4WF9_0954WF90.51342Isolated non-canonical cWW with bulgesXG2601C2602G2605*C2537U2538C2539cWWncWWcWW
253 IL_4PKD_0014PKD0.55141Isolated non-canonical cWW with bulgesVA86U87C89*G106U107U108cWWcwWcWW
254 IL_4RUM_0014RUM0.45851Isolated non-canonical cWW pairAG13A14C16*G88A89C90cWWcwWcWW
255 IL_1U6B_0011U6B0.52371Isolated non-canonical cWW pairBG19C20G22*C29A30C31cWWncWWcWW
256 IL_5TBW_0575TBW0.52481Isolated cWS basepair1A1428U1430G1431*C1376G1377U1378cWWcSWcWW
257 IL_4IOA_0374IOA0.55831Isolated non-canonical cWW pair (H)XG1042A1043G1045*C1132G1133C1134cWWcWWcWW
258 IL_4Y4O_2184Y4O0.52361Isolated non-canonical cWW pair (H)2AG1031A1032G1034*C1121G1122C1123cWWcWWcWW
259 IL_5J7L_2825J7L0.54841Isolated non-canonical cWW pairDAG1031A1032G1034*C1121G1122C1123cWWcWWcWW
260 IL_4WF9_0414WF90.57171Isolated non-canonical cWW pairXG1075A1076G1078*C1165G1166C1167cWWncWWcWW
261 IL_4K31_0034K310.48601Isolated non-canonical cWW pairB+CA16A17G19*C7G8U9cWWcWWcWW
262 IL_4K31_0024K310.49081Isolated non-canonical cWW pairC+BA16A17G19*C7G8U9cWWcWWcWW
263 IL_4IOA_0294IOA0.56290Isolated near basepair (H)XA883C884A885*U917A918U919cWWcWW
264 IL_3NJ7_0043NJ70.60170Isolated near basepairC+DC6A7G8*C3A4G5cWWcWW
265 IL_3NJ7_0033NJ70.60630Isolated near basepairD+CC6A7G8*C3A4G5cWWcWW
266 IL_4V88_4064V880.53780Isolated near basepairA6C411A412U413*A420A421G422cWWcWW
267 IL_5H1K_0015H1K0.44070Isolated non-canonical cWW pairD+CG7A8C9*G7A8C9cWWcWW
268 IL_4V9F_0774V9F0.48180Isolated near basepair0G2136A2137C2138*G2237A2238C2239ncWWcWW
269 IL_2W2H_0022W2H0.53400Isolated cWH basepairRG17U18C19*G8A9U10ncWWncWWcWW
270 IL_2H1M_0022H1M0.55980Isolated cWH basepairA+BA5G6U7*A26A27U28cWWncHWcWW
271 IL_2H1M_0032H1M0.59450Isolated cWH basepairB+AA21G22U23*A10A11U12cWWncHWcWW
272 IL_1M5K_0041M5K0.59780Isolated cWH basepairBG72G73G74*C79U80U81ncWWcWW
273 IL_4Y4O_2024Y4O0.756012AC844G845C846*G931A933G934cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUC*GUC48
CUG*CUG34
CAG*CAG11
CCG*CCG8
AUG*CUU6
ACU*ACU4
CCG*CUG4
AUG*CCU4
GUG*CUC4
GCGAG*CUC4
GAUG*CGC4
CUG*CCG3
GGC*GAC3
GUC*GAU3
GCG*CAC3
GAC*GAC3
UUC*GGA3
ACU*AAU3
AUC*GUU3
AUA*UUU3
GGG*CAC3
CUG*UUG3
GCC*GGC2
GAAG*CGC2
GGC*GGC2
CUC*GGG2
CCU*GAG2
ACC*GAU2
GCU*AAC2
GGAG*CAC2
GGG*CAU2
GAG*CGU2
GUG*UGC2
UUG*UUA2
CAG*UAG2
AAAG*CGU2
AGU*AAU2
CUGU*AUUCGG1
CUGU*ACUCGG1
CUGU*ACUAGG1
CAC*GAAG1
CUAC*GAG1
GAAUC*GAC1
UUGC*GGA1
GAGG*CAC1
AAG*CGU1
AGG*UAU1
GUC*GGC1
GAU*AUU1
GGU*AAC1
GCC*GUC1
GUC*GCU1
AAU*GUU1
GAU*GUC1
GUU*AAU1
UCU*AUA1
UUU*GGA1
CAC*GGG1
AGA*UAU1
CAG*CGG1
UGA*UGG1
UCG*CUA1
UAG*CGA1
UCA*UCA1
UUA*UUA1
CCC*GAG1
UCC*GAG1
CCC*GAAG1
CUC*GUG1
UUU*AUA1
AACU*AUU1
AUU*ACU1
ACG*CCU1
ACG*CAU1
GAA*UAC1
GCC*GAC1
GCC*GCC1
GUU*GUC1
UUC*GUA1
AUU*AUU1
AUC*GUUU1
CCG*CAG1
AAG*CCU1
ACG*CUU1
GUG*CCC1
AGUG*CAU1
GUG*CUU1
GCG*CCU1
GCG*CAU1
GAG*UCC1
UGG*UGA1
CAG*CCG1
CGG*CGG1
UUU*AUG1
UCG*CAA1
CAG*UUG1
AUG*UUU1
UUG*UUG1
CCG*UCG1
CAU*ACG1
GACG*UAC1
GCG*UGC1
GUG*UUAUC1
AUUC*GGU1
GCCA*UAC1
GCAG*CAC1
GCAC*GAC1
GUGAG*CUC1
AUAC*GUU1
GAGC*GAC1
GCCG*CAC1
AGUG*CGU1
ACA*UAU1
CAU*AAG1
GGG*CUU1
CGC*GGAG1
Non-Watson-Crick part of the motif
SequenceCounts
U*U113
C*A20
A*A18
C*C17
G*A13
U*C10
U*G9
C*U8
A*G6
G*G5
AA*G4
A*U4
U*A4
A*C4
CGA*U4
AU*G4
C*G3
AG*A2
GA*A2
CC*A2
CA*A2
UG*UUCG1
UG*CUCG1
UG*CUAG1
A*AA1
UA*A1
AAU*A1
UG*G1
C*AA1
AC*U1
U*UU1
GU*A1
AC*A1
U*UAU1
UU*G1
UGA*U1
UA*U1
GU*G1
G*U1
G*GA1

Release history

Release3.15
Date2019-02-08
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW pair (184)
  • (44)
  • Isolated cWH basepair (11)
  • Isolated non-canonical cWW pair (H) (8)
  • Isolated non-canonical cWW with bulges (7)
  • Isolated near basepair (4)
  • Intercalated tWH (3)
  • Self complementary (2)
  • Isolated non-canonical cWW with bulges (H) (2)
  • Isolated non-canonical cWW contact (2)
  • Decoding loop related (1)
  • Isolated near basepair (H) (1)
  • Single bulged G, near cWW (1)
  • Other IL (1)
  • Multiple bulged bases, near cWW (1)
  • Isolated cWS basepair (1)
    • Basepair signature
    cWW-cWW-cWW
    Heat map statistics
    Min 0.00 | Avg 0.42 | Max 1.06
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