7ZAG Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/19:29 | NA | NA | ||
| 1/2/84:89 | NA | NA | ||
| 1/2/155:160 | NA | NA | ||
| 1/2/190:197 | NA | NA | ||
| 1/2/218:223 | NA | NA | ||
| 1/2/268:276 | NA | NA | ||
| 1/2/305:310 | NA | NA | ||
| 1/2/329:342 | NA | NA | ||
| 1/2/351:356 | NA | NA | ||
| 1/2/388:393 | NA | NA | ||
| 1/2/422:426 | NA | NA | ||
| 1/2/444:452 | NA | NA | ||
| 1/2/488:493 | NA | NA | ||
| 1/2/583:589 | NA | NA | ||
| 1/2/656:665 | NA | NA | ||
| 1/2/692:699 | NA | NA | ||
| 1/2/753:763 | NA | NA | ||
| 1/2/809:815 | NA | NA | ||
| 1/2/833:838 | NA | NA | ||
| 1/2/867:874 | NA | NA | ||
| 1/2/935:944 | NA | NA | ||
| 1/2/985:991 | NA | NA | ||
| 1/2/1054:1061 | NA | NA | ||
| 1/2/1104:1109 | NA | NA | ||
| 1/2/1139:1145 | NA | NA | ||
| 1/2/1238:1245 | NA | NA | ||
| 1/2/1288:1297 | NA | NA | ||
| 1/2/1331:1339 | NA | NA | ||
| 1/2/1419:1424 | NA | NA | ||
| 1/2/1484:1489 | NA | NA | ||
| 1/4/31:39 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7ZAG_031 | NA | ||
| HL_7ZAG_033 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/16:18, 1/2/30:32 | NA | NA | ||
| 1/2/36:38, 1/2/518:520 | NA | NA | ||
| 1/2/54:60, 1/2/368:370 | NA | NA | ||
| 1/2/62:65, 1/2/364:366 | NA | NA | ||
| 1/2/71:74, 1/2/99:100 | NA | NA | ||
| 1/2/75:77, 1/2/96:98 | NA | NA | ||
| 1/2/125:128, 1/2/240:241 | NA | NA | ||
| 1/2/128:133, 1/2/236:240 | NA | NA | ||
| 1/2/145:150, 1/2/165:171 | NA | NA | ||
| 1/2/187:189, 1/2/198:199 | NA | NA | ||
| 1/2/249:251, 1/2/293:295 | NA | NA | ||
| 1/2/251:257, 1/2/285:293 | NA | NA | ||
| 1/2/258:261, 1/2/283:284 | NA | NA | ||
| 1/2/298:300, 1/2/318:320 | NA | NA | ||
| 1/2/301:302, 1/2/313:317 | NA | NA | ||
| 1/2/302:304, 1/2/311:313 | NA | NA | ||
| 1/2/376:378, 1/2/401:402 | NA | NA | ||
| 1/2/378:380, 1/2/399:401 | NA | NA | ||
| 1/2/380:384, 1/2/398:399 | NA | NA | ||
| 1/2/384:385, 1/2/396:398 | NA | NA | ||
| 1/2/386:388, 1/2/393:395 | NA | NA | ||
| 1/2/466:468, 1/2/508:510 | NA | NA | ||
| 1/2/469:476, 1/2/506:507 | NA | NA | ||
| 1/2/476:478, 1/2/505:506 | NA | NA | ||
| 1/2/478:480, 1/2/503:505 | NA | NA | ||
| 1/2/481:487, 1/2/494:502 | NA | NA | ||
| 1/2/545:550, 1/2/724:729 | NA | NA | ||
| 1/2/560:562, 1/2/611:612 | NA | NA | ||
| 1/2/563:564, 1/2/607:610 | NA | NA | ||
| 1/2/571:577, 1/2/595:600 | NA | NA | ||
| 1/2/581:583, 1/2/589:591 | NA | NA | ||
| 1/2/621:623, 1/2/717:721 | NA | NA | ||
| 1/2/624:625, 1/2/714:716 | NA | NA | ||
| 1/2/625:627, 1/2/712:714 | NA | NA | ||
| 1/2/627:633, 1/2/707:712 | NA | NA | ||
| 1/2/635:638, 1/2/702:705 | NA | NA | ||
| 1/2/641:645, 1/2/679:683 | NA | NA | ||
| 1/2/651:655, 1/2/666:673 | NA | NA | ||
| 1/2/738:741, 1/2/772:775 | NA | NA | ||
| 1/2/741:745, 1/2/771:772 | NA | NA | ||
| 1/2/746:750, 1/2/766:770 | NA | NA | ||
| 1/2/750:752, 1/2/764:766 | NA | NA | ||
| 1/2/789:791, 1/2/847:849 | NA | NA | ||
| 1/2/791:793, 1/2/845:847 | NA | NA | ||
| 1/2/858:865, 1/2/876:881 | NA | NA | ||
| 1/2/865:867, 1/2/874:876 | NA | NA | ||
| 1/2/893:894, 1/2/1367:1369 | NA | NA | ||
| 1/2/896:898, 1/2/1364:1365 | NA | NA | ||
| 1/2/904:907, 1/2/1354:1358 | NA | NA | ||
| 1/2/912:914, 1/2/1315:1317 | NA | NA | ||
| 1/2/924:926, 1/2/1200:1203 | NA | NA | ||
| 1/2/956:958, 1/2/1193:1195 | NA | NA | ||
| 1/2/969:971, 1/2/1002:1005 | NA | NA | ||
| 1/2/971:978, 1/2/998:1002 | NA | NA | ||
| 1/2/980:982, 1/2/994:996 | NA | NA | ||
| 1/2/1013:1015, 1/2/1182:1183 | NA | NA | ||
| 1/2/1016:1021, 1/2/1178:1181 | NA | NA | ||
| 1/2/1021:1023, 1/2/1173:1178 | NA | NA | ||
| 1/2/1024:1026, 1/2/1169:1172 | NA | NA | ||
| 1/2/1038:1051, 1/2/1064:1067 | NA | NA | ||
| 1/2/1089:1092, 1/2/1119:1123 | NA | NA | ||
| 1/2/1094:1097, 1/2/1116:1117 | NA | NA | ||
| 1/2/1132:1135, 1/2/1149:1155 | NA | NA | ||
| 1/2/1136:1138, 1/2/1146:1148 | NA | NA | ||
| 1/2/1221:1227, 1/2/1258:1264 | NA | NA | ||
| 1/2/1229:1232, 1/2/1251:1256 | NA | NA | ||
| 1/2/1232:1236, 1/2/1247:1251 | NA | NA | ||
| 1/2/1277:1282, 1/2/1303:1308 | NA | NA | ||
| 1/2/1373:1375, 1/2/1470:1473 | NA | NA | ||
| 1/2/1375:1378, 1/2/1466:1470 | NA | NA | ||
| 1/2/1379:1381, 1/2/1463:1465 | NA | NA | ||
| 1/2/1381:1383, 1/2/1460:1463 | NA | NA | ||
| 1/2/1386:1388, 1/2/1455:1457 | NA | NA | ||
| 1/2/1390:1393, 1/2/1450:1453 | NA | NA | ||
| 1/2/1405:1408, 1/2/1435:1438 | NA | NA | ||
| 1/2/1476:1478, 1/2/1495:1497 | NA | NA | ||
| 1/2/1478:1480, 1/2/1493:1495 | NA | NA | ||
| 1/2/1504:1506, 1/5/7:9 | NA | NA | ||
| 1/2/1508:1509, 1/5/4:5 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/52:54, 1/2/370:376, 1/2/402:405 | NA | NA | ||
| 1/2/552:554, 1/2/618:621, 1/2/721:722 | NA | NA | ||
| 1/2/639:640, 1/2/684:692, 1/2/699:701 | NA | NA | ||
| 1/2/793:797, 1/2/827:833, 1/2/838:845 | NA | NA | ||
| 1/2/915:918, 1/2/1209:1211, 1/2/1311:1314 | NA | NA | ||
| 1/2/927:935, 1/2/944:956, 1/2/1195:1199 | NA | NA | ||
| 1/2/962:966, 1/2/1008:1013, 1/2/1183:1189 | NA | NA | ||
| 1/2/1027:1033, 1/2/1072:1077, 1/2/1162:1168 | NA | NA | ||
| 1/2/1081:1083, 1/2/1129:1132, 1/2/1155:1158 | NA | NA | ||
| 1/2/1211:1215, 1/2/1270:1277, 1/2/1308:1311 | NA | NA |
Problematic loops
No problematic loops
Coloring options: