4V7A | Motifs

106 Hairpin loops
187 Internal loops
19 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_4V7A_001 ➜	1/A1/13:22	NA	NA
2	HL_4V7A_002 ➜	1/A1/31:39	NA	NA
3	HL_4V7A_003 ➜	1/A1/53:61	NA	NA
4	HL_4V7A_004 ➜	1/AA/11:23	NA	NA
5	HL_4V7A_005 ➜	1/AA/83:86	NA	NA
6	HL_4V7A_006 ➜	1/AA/158:163	NA	NA
7	HL_4V7A_007 ➜	1/AA/186:191	NA	NA
8	HL_4V7A_008 ➜	1/AA/207:212	NA	NA
9	HL_4V7A_009 ➜	1/AA/259:267	NA	NA
10	HL_4V7A_010 ➜	1/AA/296:301	NA	NA
11	HL_4V7A_011 ➜	1/AA/320:333	NA	NA
12	HL_4V7A_012 ➜	1/AA/342:347	NA	NA
13	HL_4V7A_013 ➜	1/AA/379:384	NA	NA
14	HL_4V7A_014 ➜	1/AA/419:424	NA	NA
15	HL_4V7A_015 ➜	1/AA/462:470	NA	NA
16	HL_4V7A_016 ➜	1/AA/522:527	NA	NA
17	HL_4V7A_017 ➜	1/AA/617:623	NA	NA
18	HL_4V7A_018 ➜	1/AA/689:698	NA	NA
19	HL_4V7A_019 ➜	1/AA/726:731	NA	NA
20	HL_4V7A_020 ➜	1/AA/786:796	NA	NA
21	HL_4V7A_021 ➜	1/AA/840:846	NA	NA
22	HL_4V7A_022 ➜	1/AA/862:867	NA	NA
23	HL_4V7A_023 ➜	1/AA/897:902	NA	NA
24	HL_4V7A_024 ➜	1/AA/963:972	NA	NA
25	HL_4V7A_025 ➜	1/AA/1012:1017	NA	NA
26	HL_4V7A_026 ➜	1/AA/1028:1033	NA	NA
27	HL_4V7A_027 ➜	1/AA/1076:1081	NA	NA
28	HL_4V7A_028 ➜	1/AA/1089:1096	NA	NA
29	HL_4V7A_029 ➜	1/AA/1134:1140	NA	NA
30	HL_4V7A_030 ➜	1/AA/1165:1171	NA	NA
31	HL_4V7A_031 ➜	1/AA/1265:1270	NA	NA
32	HL_4V7A_032 ➜	1/AA/1314:1323	NA	NA
33	HL_4V7A_033 ➜	1/AA/1356:1366	NA	NA
34	HL_4V7A_034 ➜	1/AA/1449:1454	NA	NA
35	HL_4V7A_035 ➜	1/AA/1515:1520	NA	NA
36	HL_4V7A_036 ➜	1/BA/59:68	NA	NA
37	HL_4V7A_037 ➜	1/BA/86:96	NA	NA
38	HL_4V7A_038 ➜	1/BA/123:128	NA	NA
39	HL_4V7A_039 ➜	1/BA/137:142	NA	NA
40	HL_4V7A_040 ➜	1/BA/158:168	NA	NA
41	HL_4V7A_041 ➜	1/BA/194:201	NA	NA
42	HL_4V7A_042 ➜	1/BA/225:230	NA	NA
43	HL_4V7A_043 ➜	1/BA/246:252	NA	NA
44	HL_4V7A_044 ➜	1/BA/305:312	NA	NA
45	HL_4V7A_045 ➜	1/BA/319:323	NA	NA
46	HL_4V7A_046 ➜	1/BA/327:335	NA	NA
47	HL_4V7A_047 ➜	1/BA/381:393	NA	NA
48	HL_4V7A_048 ➜	1/BA/410:417	NA	NA
49	HL_4V7A_049 ➜	1/BA/462:467	NA	NA
50	HL_4V7A_050 ➜	1/BA/487:493	NA	NA
51	HL_4V7A_051 ➜	1/BA/543:550	NA	NA
52	HL_4V7A_052 ➜	1/BA/566:575	NA	NA
53	HL_4V7A_053 ➜	1/BA/611:617	NA	NA
54	HL_4V7A_054 ➜	1/BA/629:634	NA	NA
55	HL_4V7A_055 ➜	1/BA/641:647	NA	NA
56	HL_4V7A_056 ➜	1/BA/712:719	NA	NA
57	HL_4V7A_057 ➜	1/BA/744:753	NA	NA
58	HL_4V7A_058 ➜	1/BA/779:785	NA	NA
59	HL_4V7A_059 ➜	1/BA/826:831	NA	NA
60	HL_4V7A_061 ➜	1/BA/954:963	NA	NA
61	HL_4V7A_062 ➜	1/BA/978:985	NA	NA
62	HL_4V7A_063 ➜	1/BA/1064:1074	NA	NA
63	HL_4V7A_064 ➜	1/BA/1092:1099	NA	NA
64	HL_4V7A_065 ➜	1/BA/1172:1177	NA	NA
65	HL_4V7A_066 ➜	1/BA/1222:1227	NA	NA
66	HL_4V7A_067 ➜	1/BA/1281:1289	NA	NA
67	HL_4V7A_068 ➜	1/BA/1324:1330	NA	NA
68	HL_4V7A_069 ➜	1/BA/1363:1368	NA	NA
69	HL_4V7A_070 ➜	1/BA/1389:1398	NA	NA
70	HL_4V7A_071 ➜	1/BA/1450:1461	NA	NA
71	HL_4V7A_072 ➜	1/BA/1492:1498	NA	NA
72	HL_4V7A_073 ➜	1/BA/1533:1538	NA	NA
73	HL_4V7A_074 ➜	1/BA/1565:1568	NA	NA
74	HL_4V7A_075 ➜	1/BA/1612:1619	NA	NA
75	HL_4V7A_076 ➜	1/BA/1630:1636	NA	NA
76	HL_4V7A_077 ➜	1/BA/1691:1696	NA	NA
77	HL_4V7A_078 ➜	1/BA/1727:1733	NA	NA
78	HL_4V7A_079 ➜	1/BA/1752:1756	NA	NA
79	HL_4V7A_080 ➜	1/BA/1777:1787	NA	NA
80	HL_4V7A_081 ➜	1/BA/1806:1811	NA	NA
81	HL_4V7A_082 ➜	1/BA/1868:1873	NA	NA
82	HL_4V7A_083 ➜	1/BA/1910:1920	NA	NA
83	HL_4V7A_084 ➜	1/BA/1949:1957	NA	NA
84	HL_4V7A_085 ➜	1/BA/2027:2036	NA	NA
85	HL_4V7A_086 ➜	1/BA/2143:2148	NA	NA
86	HL_4V7A_087 ➜	1/BA/2209:2215	NA	NA
87	HL_4V7A_088 ➜	1/BA/2248:2256	NA	NA
88	HL_4V7A_089 ➜	1/BA/2264:2276	NA	NA
89	HL_4V7A_090 ➜	1/BA/2303:2313	NA	NA
90	HL_4V7A_091 ➜	1/BA/2323:2332	NA	NA
91	HL_4V7A_092 ➜	1/BA/2356:2361	NA	NA
92	HL_4V7A_093 ➜	1/BA/2374:2379	NA	NA
93	HL_4V7A_094 ➜	1/BA/2404:2413	NA	NA
94	HL_4V7A_095 ➜	1/BA/2471:2479	NA	NA
95	HL_4V7A_096 ➜	1/BA/2526:2537	NA	NA
96	HL_4V7A_097 ➜	1/BA/2551:2557	NA	NA
97	HL_4V7A_098 ➜	1/BA/2594:2599	NA	NA
98	HL_4V7A_099 ➜	1/BA/2658:2663	NA	NA
99	HL_4V7A_100 ➜	1/BA/2701:2706	NA	NA
100	HL_4V7A_101 ➜	1/BA/2745:2759	NA	NA
101	HL_4V7A_102 ➜	1/BA/2796:2800	NA	NA
102	HL_4V7A_103 ➜	1/BA/2819:2827	NA	NA
103	HL_4V7A_104 ➜	1/BA/2856:2861	NA	NA
104	HL_4V7A_105 ➜	1/BB/38:44	NA	NA
105	HL_4V7A_106 ➜	1/BB/86:90	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_4V7A_060 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_4V7A_001 ➜	1/AA/30:32,1/AA/552:553	NA	NA
2	IL_4V7A_002 ➜	1/AA/44:45,1/AA/396:398	NA	NA
3	IL_4V7A_003 ➜	1/AA/47:52,1/AA/359:361	NA	NA
4	IL_4V7A_004 ➜	1/AA/54:56,1/AA/356:357	NA	NA
5	IL_4V7A_005 ➜	1/AA/63:66,1/AA/103:104	NA	NA
6	IL_4V7A_006 ➜	1/AA/67:69,1/AA/99:102	NA	NA
7	IL_4V7A_007 ➜	1/AA/70:73,1/AA/97:98	NA	NA
8	IL_4V7A_008 ➜	1/AA/75:76,1/AA/93:95	NA	NA
9	IL_4V7A_009 ➜	1/AA/78:81,1/AA/88:91	NA	NA
10	IL_4V7A_010 ➜	1/AA/128:131,1/AA/231:233	NA	NA
11	IL_4V7A_011 ➜	1/AA/132:136,1/AA/227:230	NA	NA
12	IL_4V7A_012 ➜	1/AA/144:146,1/AA/176:178	NA	NA
13	IL_4V7A_013 ➜	1/AA/147:153,1/AA/168:175	NA	NA
14	IL_4V7A_014 ➜	1/AA/203:206,1/AA/213:214	NA	NA
15	IL_4V7A_015 ➜	1/AA/242:247,1/AA/277:284	NA	NA
16	IL_4V7A_016 ➜	1/AA/248:253,1/AA/273:276	NA	NA
17	IL_4V7A_017 ➜	1/AA/292:293,1/AA/304:308	NA	NA
18	IL_4V7A_018 ➜	1/AA/367:369,1/AA/392:393	NA	NA
19	IL_4V7A_019 ➜	1/AA/371:375,1/AA/389:390	NA	NA
20	IL_4V7A_020 ➜	1/AA/375:376,1/AA/387:389	NA	NA
21	IL_4V7A_021 ➜	1/AA/409:416,1/AA/427:433	NA	NA
22	IL_4V7A_022 ➜	1/AA/440:442,1/AA/492:497	NA	NA
23	IL_4V7A_023 ➜	1/AA/446:450,1/AA/483:488	NA	NA
24	IL_4V7A_024 ➜	1/AA/450:455,1/AA/477:483	NA	NA
25	IL_4V7A_025 ➜	1/AA/458:459,1/AA/472:474	NA	NA
26	IL_4V7A_026 ➜	1/AA/460:462,1/AA/470:471	NA	NA
27	IL_4V7A_027 ➜	1/AA/504:511,1/AA/540:541	NA	NA
28	IL_4V7A_028 ➜	1/AA/515:521,1/AA/528:536	NA	NA
29	IL_4V7A_029 ➜	1/AA/569:575,1/AA/880:881	NA	NA
30	IL_4V7A_030 ➜	1/AA/580:584,1/AA/757:761	NA	NA
31	IL_4V7A_031 ➜	1/AA/593:596,1/AA/644:646	NA	NA
32	IL_4V7A_032 ➜	1/AA/597:598,1/AA/640:643	NA	NA
33	IL_4V7A_033 ➜	1/AA/605:613,1/AA/627:633	NA	NA
34	IL_4V7A_034 ➜	1/AA/654:655,1/AA/751:754	NA	NA
35	IL_4V7A_035 ➜	1/AA/659:660,1/AA/745:747	NA	NA
36	IL_4V7A_036 ➜	1/AA/662:666,1/AA/740:743	NA	NA
37	IL_4V7A_037 ➜	1/AA/673:678,1/AA/712:717	NA	NA
38	IL_4V7A_038 ➜	1/AA/684:688,1/AA/699:706	NA	NA
39	IL_4V7A_039 ➜	1/AA/774:778,1/AA/804:805	NA	NA
40	IL_4V7A_040 ➜	1/AA/779:783,1/AA/799:803	NA	NA
41	IL_4V7A_041 ➜	1/AA/887:894,1/AA/905:910	NA	NA
42	IL_4V7A_042 ➜	1/AA/922:923,1/AA/1393:1395	NA	NA
43	IL_4V7A_043 ➜	1/AA/925:927,1/AA/1390:1391	NA	NA
44	IL_4V7A_044 ➜	1/AA/933:935,1/AA/1380:1384	NA	NA
45	IL_4V7A_045 ➜	1/AA/953:954,1/AA/1226:1228	NA	NA
46	IL_4V7A_047 ➜	1/AA/998:999,1/AA/1041:1043	NA	NA
47	IL_4V7A_048 ➜	1/AA/1048:1050,1/AA/1208:1209	NA	NA
48	IL_4V7A_049 ➜	1/AA/1051:1056,1/AA/1204:1207	NA	NA
49	IL_4V7A_050 ➜	1/AA/1057:1058,1/AA/1199:1203	NA	NA
50	IL_4V7A_051 ➜	1/AA/1060:1061,1/AA/1195:1197	NA	NA
51	IL_4V7A_052 ➜	1/AA/1124:1128,1/AA/1144:1149	NA	NA
52	IL_4V7A_053 ➜	1/AA/1129:1132,1/AA/1142:1143	NA	NA
53	IL_4V7A_054 ➜	1/AA/1158:1161,1/AA/1175:1181	NA	NA
54	IL_4V7A_055 ➜	1/AA/1247:1253,1/AA/1284:1290	NA	NA
55	IL_4V7A_057 ➜	1/AA/1255:1258,1/AA/1277:1282	NA	NA
56	IL_4V7A_058 ➜	1/AA/1259:1263,1/AA/1272:1276	NA	NA
57	IL_4V7A_059 ➜	1/AA/1303:1308,1/AA/1329:1334	NA	NA
58	IL_4V7A_060 ➜	1/AA/1350:1352,1/AA/1370:1372	NA	NA
59	IL_4V7A_061 ➜	1/AA/1399:1401,1/AA/1501:1504	NA	NA
60	IL_4V7A_062 ➜	1/AA/1401:1404,1/AA/1497:1501	NA	NA
61	IL_4V7A_063 ➜	1/AA/1405:1407,1/AA/1494:1496	NA	NA
62	IL_4V7A_064 ➜	1/AA/1407:1409,1/AA/1491:1494	NA	NA
63	IL_4V7A_065 ➜	1/AA/1412:1415,1/AA/1485:1488	NA	NA
64	IL_4V7A_066 ➜	1/AA/1416:1419,1/AA/1481:1484	NA	NA
65	IL_4V7A_067 ➜	1/AA/1430:1435,1/AA/1466:1470	NA	NA
66	IL_4V7A_068 ➜	1/AA/1440:1442,1/AA/1460:1461	NA	NA
67	IL_4V7A_069 ➜	1/AA/1443:1448,1/AA/1455:1459	NA	NA
68	IL_4V7A_070 ➜	1/BA/24:30,1/BA/510:516	NA	NA
69	IL_4V7A_071 ➜	1/BA/36:37,1/BA/442:444	NA	NA
70	IL_4V7A_072 ➜	1/BA/43:44,1/BA/434:436	NA	NA
71	IL_4V7A_073 ➜	1/BA/81:85,1/BA/97:105	NA	NA
72	IL_4V7A_074 ➜	1/BA/183:184,1/BA/212:214	NA	NA
73	IL_4V7A_075 ➜	1/BA/188:194,1/BA/201:208	NA	NA
74	IL_4V7A_076 ➜	1/BA/239:245,1/BA/253:258	NA	NA
75	IL_4V7A_077 ➜	1/BA/269:271,1/BA/366:370	NA	NA
76	IL_4V7A_078 ➜	1/BA/274:281,1/BA/359:363	NA	NA
77	IL_4V7A_079 ➜	1/BA/293:296,1/BA/342:347	NA	NA
78	IL_4V7A_080 ➜	1/BA/406:408,1/BA/419:421	NA	NA
79	IL_4V7A_081 ➜	1/BA/481:484,1/BA/496:509	NA	NA
80	IL_4V7A_082 ➜	1/BA/536:539,1/BA/554:557	NA	NA
81	IL_4V7A_083 ➜	1/BA/564:566,1/BA/575:577	NA	NA
82	IL_4V7A_084 ➜	1/BA/606:610,1/BA/618:622	NA	NA
83	IL_4V7A_085 ➜	1/BA/672:674,1/BA/806:808	NA	NA
84	IL_4V7A_086 ➜	1/BA/674:678,1/BA/799:806	NA	NA
85	IL_4V7A_087 ➜	1/BA/697:698,1/BA/763:765	NA	NA
86	IL_4V7A_088 ➜	1/BA/702:703,1/BA/728:730	NA	NA
87	IL_4V7A_089 ➜	1/BA/703:707,1/BA/724:728	NA	NA
88	IL_4V7A_090 ➜	1/BA/738:740,1/BA/757:758	NA	NA
89	IL_4V7A_091 ➜	1/BA/775:777,1/BA/787:791	NA	NA
90	IL_4V7A_092 ➜	1/BA/844:848,1/BA/930:934	NA	NA
91	IL_4V7A_093 ➜	1/BA/850:851,1/BA/926:928	NA	NA
92	IL_4V7A_094 ➜	1/BA/856:862,1/BA/915:921	NA	NA
93	IL_4V7A_095 ➜	1/BA/862:863,1/BA/913:915	NA	NA
94	IL_4V7A_096 ➜	1/BA/864:868,1/BA/909:912	NA	NA
95	IL_4V7A_097 ➜	1/BA/870:872,1/BA/905:907	NA	NA
96	IL_4V7A_098 ➜	1/BA/875:879,1/BA/898:902	NA	NA
97	IL_4V7A_099 ➜	1/BA/880:882,1/BA/894:897	NA	NA
98	IL_4V7A_100 ➜	1/BA/994:996,1/BA/1159:1160	NA	NA
99	IL_4V7A_101 ➜	1/BA/998:1002,1/BA/1153:1157	NA	NA
100	IL_4V7A_102 ➜	1/BA/1004:1011,1/BA/1150:1151	NA	NA
101	IL_4V7A_103 ➜	1/BA/1011:1013,1/BA/1149:1150	NA	NA
102	IL_4V7A_104 ➜	1/BA/1018:1024,1/BA/1140:1144	NA	NA
103	IL_4V7A_105 ➜	1/BA/1024:1030,1/BA/1124:1140	NA	NA
104	IL_4V7A_106 ➜	1/BA/1031:1034,1/BA/1121:1123	NA	NA
105	IL_4V7A_107 ➜	1/BA/1038:1041,1/BA/1114:1117	NA	NA
106	IL_4V7A_109 ➜	1/BA/1059:1062,1/BA/1076:1079	NA	NA
107	IL_4V7A_110 ➜	1/BA/1087:1091,1/BA/1100:1102	NA	NA
108	IL_4V7A_111 ➜	1/BA/1196:1198,1/BA/1247:1250	NA	NA
109	IL_4V7A_112 ➜	1/BA/1202:1206,1/BA/1240:1243	NA	NA
110	IL_4V7A_113 ➜	1/BA/1208:1215,1/BA/1234:1238	NA	NA
111	IL_4V7A_114 ➜	1/BA/1217:1219,1/BA/1230:1232	NA	NA
112	IL_4V7A_115 ➜	1/BA/1262:1269,1/BA/2011:2017	NA	NA
113	IL_4V7A_116 ➜	1/BA/1310:1313,1/BA/1603:1604	NA	NA
114	IL_4V7A_117 ➜	1/BA/1319:1323,1/BA/1331:1333	NA	NA
115	IL_4V7A_118 ➜	1/BA/1351:1355,1/BA/1376:1380	NA	NA
116	IL_4V7A_119 ➜	1/BA/1357:1361,1/BA/1370:1374	NA	NA
117	IL_4V7A_121 ➜	1/BA/1407:1409,1/BA/1593:1595	NA	NA
118	IL_4V7A_122 ➜	1/BA/1415:1416,1/BA/1582:1587	NA	NA
119	IL_4V7A_123 ➜	1/BA/1417:1421,1/BA/1577:1581	NA	NA
120	IL_4V7A_124 ➜	1/BA/1432:1435,1/BA/1557:1561	NA	NA
121	IL_4V7A_125 ➜	1/BA/1437:1440,1/BA/1551:1555	NA	NA
122	IL_4V7A_126 ➜	1/BA/1468:1472,1/BA/1519:1524	NA	NA
123	IL_4V7A_127 ➜	1/BA/1474:1478,1/BA/1513:1517	NA	NA
124	IL_4V7A_128 ➜	1/BA/1481:1482,1/BA/1507:1510	NA	NA
125	IL_4V7A_129 ➜	1/BA/1488:1491,1/BA/1499:1501	NA	NA
126	IL_4V7A_130 ➜	1/BA/1526:1529,1/BA/1542:1546	NA	NA
127	IL_4V7A_131 ➜	1/BA/1651:1656,1/BA/2004:2006	NA	NA
128	IL_4V7A_132 ➜	1/BA/1663:1665,1/BA/1995:1997	NA	NA
129	IL_4V7A_133 ➜	1/BA/1666:1669,1/BA/1993:1994	NA	NA
130	IL_4V7A_134 ➜	1/BA/1669:1674,1/BA/1990:1993	NA	NA
131	IL_4V7A_135 ➜	1/BA/1686:1691,1/BA/1696:1702	NA	NA
132	IL_4V7A_136 ➜	1/BA/1712:1718,1/BA/1742:1746	NA	NA
133	IL_4V7A_137 ➜	1/BA/1720:1725,1/BA/1735:1740	NA	NA
134	IL_4V7A_138 ➜	1/BA/1770:1771,1/BA/1980:1982	NA	NA
135	IL_4V7A_139 ➜	1/BA/1798:1804,1/BA/1813:1821	NA	NA
136	IL_4V7A_140 ➜	1/BA/1837:1840,1/BA/1902:1903	NA	NA
137	IL_4V7A_141 ➜	1/BA/1841:1842,1/BA/1898:1901	NA	NA
138	IL_4V7A_142 ➜	1/BA/1845:1849,1/BA/1893:1895	NA	NA
139	IL_4V7A_143 ➜	1/BA/1864:1867,1/BA/1874:1878	NA	NA
140	IL_4V7A_144 ➜	1/BA/1933:1934,1/BA/1964:1967	NA	NA
141	IL_4V7A_145 ➜	1/BA/1934:1945,1/BA/1961:1964	NA	NA
142	IL_4V7A_146 ➜	1/BA/2050:2052,1/BA/2617:2618	NA	NA
143	IL_4V7A_147 ➜	1/BA/2053:2056,1/BA/2612:2616	NA	NA
144	IL_4V7A_148 ➜	1/BA/2067:2069,1/BA/2442:2443	NA	NA
145	IL_4V7A_149 ➜	1/BA/2070:2071,1/BA/2438:2441	NA	NA
146	IL_4V7A_150 ➜	1/BA/2081:2083,1/BA/2236:2239	NA	NA
147	IL_4V7A_151 ➜	1/BA/2085:2087,1/BA/2232:2234	NA	NA
148	IL_4V7A_152 ➜	1/BA/2101:2103,1/BA/2186:2188	NA	NA
149	IL_4V7A_153 ➜	1/BA/2103:2105,1/BA/2184:2186	NA	NA
150	IL_4V7A_154 ➜	1/BA/2108:2110,1/BA/2179:2181	NA	NA
151	IL_4V7A_159 ➜	1/BA/2137:2141,1/BA/2150:2154	NA	NA
152	IL_4V7A_160 ➜	1/BA/2202:2204,1/BA/2220:2221	NA	NA
153	IL_4V7A_161 ➜	1/BA/2350:2353,1/BA/2364:2367	NA	NA
154	IL_4V7A_162 ➜	1/BA/2401:2403,1/BA/2414:2415	NA	NA
155	IL_4V7A_163 ➜	1/BA/2454:2455,1/BA/2496:2498	NA	NA
156	IL_4V7A_164 ➜	1/BA/2457:2459,1/BA/2493:2494	NA	NA
157	IL_4V7A_165 ➜	1/BA/2459:2461,1/BA/2489:2493	NA	NA
158	IL_4V7A_167 ➜	1/BA/2466:2470,1/BA/2480:2484	NA	NA
159	IL_4V7A_168 ➜	1/BA/2507:2508,1/BA/2580:2582	NA	NA
160	IL_4V7A_169 ➜	1/BA/2510:2512,1/BA/2574:2578	NA	NA
161	IL_4V7A_170 ➜	1/BA/2512:2513,1/BA/2571:2574	NA	NA
162	IL_4V7A_171 ➜	1/BA/2521:2523,1/BA/2540:2544	NA	NA
163	IL_4V7A_172 ➜	1/BA/2591:2592,1/BA/2601:2603	NA	NA
164	IL_4V7A_173 ➜	1/BA/2636:2640,1/BA/2774:2782	NA	NA
165	IL_4V7A_174 ➜	1/BA/2652:2658,1/BA/2663:2668	NA	NA
166	IL_4V7A_175 ➜	1/BA/2680:2684,1/BA/2725:2727	NA	NA
167	IL_4V7A_176 ➜	1/BA/2687:2691,1/BA/2718:2722	NA	NA
168	IL_4V7A_177 ➜	1/BA/2695:2696,1/BA/2711:2714	NA	NA
169	IL_4V7A_178 ➜	1/BA/2737:2742,1/BA/2762:2767	NA	NA
170	IL_4V7A_179 ➜	1/BA/2817:2819,1/BA/2827:2829	NA	NA
171	IL_4V7A_180 ➜	1/BA/2838:2839,1/BA/2878:2880	NA	NA
172	IL_4V7A_181 ➜	1/BA/2843:2846,1/BA/2870:2874	NA	NA
173	IL_4V7A_182 ➜	1/BA/2847:2853,1/BA/2864:2869	NA	NA
174	IL_4V7A_183 ➜	1/BB/17:19,1/BB/64:67	NA	NA
175	IL_4V7A_184 ➜	1/BB/23:28,1/BB/56:60	NA	NA
176	IL_4V7A_185 ➜	1/BB/30:31,1/BB/51:54	NA	NA
177	IL_4V7A_186 ➜	1/BB/34:38,1/BB/44:48	NA	NA
178	IL_4V7A_187 ➜	1/BB/71:79,1/BB/97:105	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_4V7A_046 ➜	complementary	NA
2	IL_4V7A_056 ➜	complementary	NA
3	IL_4V7A_108 ➜	missing nts	NA
4	IL_4V7A_120 ➜	complementary	NA
5	IL_4V7A_155 ➜	missing nts	NA
6	IL_4V7A_156 ➜	missing nts	NA
7	IL_4V7A_157 ➜	missing nts	NA
8	IL_4V7A_158 ➜	missing nts	NA
9	IL_4V7A_166 ➜	complementary	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_4V7A_001 ➜	1/AA/826:829,1/AA/857:861,1/AA/868:874	NA	NA
2	J3_4V7A_002 ➜	1/AA/936:939,1/AA/1344:1350,1/AA/1372:1379	NA	NA
3	J3_4V7A_003 ➜	1/AA/943:946,1/AA/1235:1237,1/AA/1337:1340	NA	NA
4	J3_4V7A_004 ➜	1/AA/955:962,1/AA/973:984,1/AA/1221:1225	NA	NA
5	J3_4V7A_005 ➜	1/AA/990:997,1/AA/1044:1047,1/AA/1210:1215	NA	NA
6	J3_4V7A_006 ➜	1/AA/1003:1006,1/AA/1023:1027,1/AA/1034:1037	NA	NA
7	J3_4V7A_007 ➜	1/AA/1061:1068,1/AA/1107:1113,1/AA/1187:1195	NA	NA
8	J3_4V7A_008 ➜	1/AA/1116:1118,1/AA/1155:1158,1/AA/1181:1184	NA	NA
9	J3_4V7A_009 ➜	1/AA/1237:1242,1/AA/1295:1303,1/AA/1334:1337	NA	NA
10	J3_4V7A_010 ➜	1/BA/683:689,1/BA/773:775,1/BA/791:794	NA	NA
11	J3_4V7A_011 ➜	1/BA/698:700,1/BA/732:736,1/BA/760:763	NA	NA
12	J3_4V7A_012 ➜	1/BA/1055:1057,1/BA/1081:1087,1/BA/1102:1104	NA	NA
13	J3_4V7A_013 ➜	1/BA/1298:1303,1/BA/1625:1627,1/BA/1639:1642	NA	NA
14	J3_4V7A_014 ➜	1/BA/1306:1309,1/BA/1605:1611,1/BA/1620:1622	NA	NA
15	J3_4V7A_015 ➜	1/BA/2091:2093,1/BA/2196:2200,1/BA/2223:2228	NA	NA
16	J3_4V7A_016 ➜	1/BA/2282:2285,1/BA/2383:2396,1/BA/2420:2427	NA	NA
17	J3_4V7A_017 ➜	1/BA/2295:2299,1/BA/2317:2323,1/BA/2332:2337	NA	NA
18	J3_4V7A_018 ➜	1/BA/2517:2520,1/BA/2545:2547,1/BA/2561:2567	NA	NA
19	J3_4V7A_019 ➜	1/BB/10:16,1/BB/68:70,1/BB/106:110	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

4V7A Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops