#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 41-42-3
1 IL_1S72_0451S720.81592Bulged stacked bases (H)0 LSU rRNAG1269U1270*A1286C1289cWWcWW
2 IL_4IOA_0244IOA0.66561Single bulged C (H)X LSU rRNAC863C864*G938G940cWWcWW
3 IL_4CUV_1084CUV0.45131125S RRNAG2614G2615*C2625C2627cWWcWW
4 IL_4CUX_0334CUX0.60085218S RRNAU1104C1105*G616A622cWWcWW
5 IL_3U5F_0333U5F0.54645618S rRNAU1104C1105*G616A622cWWcWW
6 IL_4BPP_0334BPP0.56705A18S RRNAU1076C1077*G610A616cWWcWW
7 IL_4FAW_0144FAW0.79552AGroup II catalytic intron D1-D4-1U365A366*U375G378cWWcWW
8 IL_4C7O_0034C7O0.85951Single bulged CESRP RNAC12G13*C31G33cWWcWW
9 IL_3U5H_0633U5H0.81871525S rRNAC1420G1421*C1385G1387cWWcWW
10 IL_3U5H_0193U5H0.54761525S rRNAU512G513*C577G579cWWcWW
11 IL_1FJG_0221FJG0.34815A SSU rRNAC880G881*C569G575cWWcWW
12 IL_2AW7_0292AW70.36415A16S ribosomal RNAC880G881*C569G575cWWcWW
13 IL_1S72_0421S720.23131Single bulged G (H)0 LSU rRNAC1225G1226*U1136G1138cWWcWW
14 IL_3D0U_0053D0U0.31781Single bulged GALysine Riboswitch RNAC81G82*U106G108ncWWcWW
15 IL_4A1B_0634A1B0.27611126S RRNAU1437A1438*U1424G1426cWWcWW
16 IL_2QBG_0862QBG0.30051B23S rRNAU2220G2221*U2202G2204cWWcWW
17 IL_4CUV_0674CUV0.53501125S RRNAC1411G1412*U1398G1400ncWWcWW
18 IL_4NVV_0344NVV0.46851A23S Ribosomal RNAG927G928*U941C943cWW
19 IL_2QBG_1072QBG0.26801B23S rRNAG2838G2839*U2878C2880cWWcWW
20 IL_4IOA_1014IOA0.27551Single bulged GX LSU rRNAG2813G2814*U2853C2855cWWcWW
21 IL_4CUV_1434CUV0.29571125S RRNAC3324G3325*U3381G3383cWWcWW
22 IL_3U5H_1373U5H0.23931525S rRNAC3324G3325*U3381G3383cWWcWW
23 IL_4NVV_0614NVV0.23241A23S Ribosomal RNAC1545G1546*U1535G1537cWWcWW
24 IL_2NZ4_0072NZ40.15311R+GGlmS ribozymeC52G53*C5G7cWWcWW
25 IL_1FJG_0051FJG0.11202Multiple bulged bases (H)A SSU rRNAC103G104*C63G66cWWcWW
26 IL_2QBG_0602QBG0.00001B23S rRNAC1499G1500*C1489G1491cWWcWW
27 IL_2AW7_0052AW70.09132A16S ribosomal RNAU103G104*C63A66cWWcWW
28 IL_1S72_0221S720.09822Multiple bulged bases (H)0 LSU rRNAC726G727*C699G702cWWcWW
29 IL_1S72_0991S720.17341Major groove intercalation (H)9 5S rRNAC15G16*C64G66cWWcWW
30 IL_4NVV_1074NVV0.19861B5S Ribosomal RNAC17G18*C65G67cWWcWW
31 IL_1U9S_0061U9S0.29131Major groove intercalationARIBONUCLEASE PG140G141*U158C160cWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
CG*CAG5
UC*GUUAAAA3
CG*CGUAAAG2
CG*UGG2
CG*UAG2
GG*UAC2
GG*UGC2
CG*UUG2
GU*AAUC1
CC*GCG1
GG*CAC1
UA*UACG1
CG*CCG1
UG*CAG1
UA*UUG1
UG*UUG1
CG*CGUG1
UG*CGAA1
CG*CAUG1
Non-Watson-Crick part of the motif
SequenceCounts
*A11
*G4
*U4
*UUAAA3
*AU2
*C2
*GUAAA2
*AC1
*GU1
*GA1

Release history

Release1.15
Date2014-06-20
Status> 2 parents

Parent motifs

Parent motifCommon motif instancesOnly in IL_04465.1Only in the parent motif
IL_28947.3
Compare
IL_2QBG_086, IL_2NZ4_007, IL_1S72_042, IL_3U5H_063, IL_4A1B_063, IL_2QBG_060, IL_4NVV_034, IL_3U5H_137, IL_4NVV_061, IL_4C7O_003, IL_1S72_022, IL_1FJG_005, IL_4NVV_107, IL_3U5H_019, IL_1S72_099, IL_2AW7_005, IL_4FAW_014IL_2QBG_107, IL_1U9S_006, IL_1S72_045, IL_4CUV_143, IL_3D0U_005, IL_3U5F_033, IL_1FJG_022, IL_4CUX_033, IL_4CUV_067, IL_4BPP_033, IL_2AW7_029, IL_4IOA_101, IL_4CUV_108, IL_4IOA_024IL_387D_001, IL_4IOA_067, IL_1U9S_008, IL_1KXK_003, IL_4NVV_072, IL_1XOK_001, IL_1XOK_002
IL_97217.12
Compare
IL_2QBG_107, IL_3D0U_005, IL_1U9S_006, IL_4IOA_101IL_2QBG_086, IL_4CUV_143, IL_1FJG_022, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_1S72_045, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4BPP_033, IL_4C7O_003, IL_4A1B_063, IL_2AW7_029, IL_3U5H_019, IL_3U5H_137, IL_1S72_099, IL_4CUV_108, IL_4IOA_024, IL_4CUX_033, IL_3U5F_033, IL_4NVV_034IL_4IOA_002, IL_4FAW_004, IL_4L8H_001, IL_4BPP_022, IL_3SN2_001, IL_4BPP_024, IL_4ANG_001, IL_2AW7_051, IL_4IOA_075, IL_4A1B_059, IL_3U5H_105, IL_4A1B_116, IL_3U5H_103, IL_3DIR_001, IL_4A1B_051, IL_4A1B_050, IL_4A1B_056, IL_2C50_001, IL_3U5H_065, IL_1VW3_064, IL_1VW3_067, IL_3D2V_001, IL_1VW3_060, IL_1S72_040, IL_4NVV_002, IL_4A1B_044, IL_1VW3_069, IL_3Q1Q_004, IL_2AW7_026, IL_3TZR_002, IL_4BPP_021, IL_4A1B_124, IL_2PN4_003, IL_1CSL_002, IL_2QBG_099, IL_4BPP_016, IL_2QBG_069, IL_4BPP_013, IL_4BPP_025, IL_1GID_009, IL_3U5F_059, IL_3U5F_056, IL_1GID_005, IL_1ET4_002, IL_3U5H_077, IL_4A1B_131, IL_1S72_030, IL_1S72_096, IL_4NVV_076, IL_1VW3_028, IL_3B31_001, IL_2XXA_010, IL_3U5H_025, IL_2XXA_012, IL_4IOA_071, IL_2NOK_006, IL_1I9X_001, IL_2NOK_003, IL_2QBG_080, IL_1I9X_002, IL_4IOA_057, IL_3U5H_026, IL_4BPP_075, IL_2QBG_089, IL_3SNP_001, IL_4IOA_031, IL_1FJG_040, IL_2QBG_007, IL_1VW3_004, IL_3U5H_003, IL_3U5H_002, IL_1S72_067, IL_4A1B_072, IL_1S72_088, IL_3DHS_003, IL_2PLY_002, IL_1S72_104, IL_6MSF_001, IL_3U5F_026, IL_1U9S_003, IL_3U5F_024, IL_1VW3_087, IL_3GX5_001, IL_3IWN_004, IL_3IWN_003, IL_1VW3_082, IL_4NVV_104, IL_4BPP_031, IL_3U5H_089, IL_1VW3_088, IL_2OIU_003, IL_2OIU_001, IL_2AW7_042, IL_4BPP_072, IL_4LGT_002, IL_2QBG_035, IL_1VW3_018, IL_1VW3_019, IL_2C4Z_001, IL_3U5H_014, IL_1S72_077, IL_1S72_074, IL_2AW7_001, IL_1S72_070, IL_2AW7_002, IL_3U5H_119, IL_3U5H_152, IL_2QBG_073, IL_3U5F_031, IL_2QBG_023, IL_2QBG_076, IL_3U5H_094, IL_1JZV_002, IL_3OWZ_001, IL_1VW3_091, IL_3U5H_092, IL_3U5H_093, IL_3SUX_001, IL_1R3E_001, IL_3U5H_098, IL_2AW7_008, IL_4BPP_064, IL_4BPP_067, IL_4A1C_003, IL_4A1C_002, IL_2BU1_001, IL_3R2D_001, IL_1DUQ_002, IL_1MJI_001, IL_2AW7_017, IL_4A1B_011, IL_4A1B_010, IL_3U5H_142, IL_3U5H_143, IL_3U5H_140, IL_2AW7_019, IL_4IOA_034, IL_3UCZ_002, IL_3W3S_001, IL_3W3S_002, IL_2QBG_104, IL_3U5F_009, IL_4NVV_040, IL_1FJG_001, IL_1S72_002, IL_2BQ5_001, IL_3U5F_001, IL_3D0U_001, IL_2IZN_001, IL_3U5H_013, IL_2A64_003, IL_2A64_002, IL_2IZM_001, IL_4BPP_009, IL_1MFQ_005, IL_1U63_002, IL_4C7O_004, IL_1VW3_055, IL_4C7O_001, IL_1VW3_052, IL_1FJG_016, IL_3U5H_034, IL_1FJG_014, IL_3U5H_030, IL_2PJP_001, IL_4A1B_123, IL_3U5H_136, IL_4A1B_121, IL_1U9S_001, IL_3DIR_005, IL_3U5H_131, IL_3U5H_039, IL_3U5F_016, IL_1S03_006, IL_1S03_005, IL_1S72_010, IL_3U5F_018, IL_1S72_014, IL_4B5R_001, IL_1R3E_002, IL_1FJG_007, IL_4NVV_037, IL_3IVK_003, IL_4NVV_058, IL_4A1B_095, IL_2IZ9_001, IL_4A1B_091, IL_2ZY6_002, IL_4A1B_039, IL_4LVZ_002, IL_2QBG_070, IL_1ET4_004, IL_4A1B_031, IL_4NVV_097, IL_4A1B_036, IL_4IOA_011, IL_4IOA_016, IL_3U5H_129, IL_1FJG_002, IL_4IOA_015, IL_397D_001, IL_3U5H_125, IL_4NVV_047, IL_3OWZ_005, IL_1VW3_041, IL_1FJG_043, IL_4FRG_002, IL_3MEI_001, IL_1S72_027, IL_1S72_026, IL_3U5F_069, IL_1S72_064, IL_4NVV_021, IL_4NVV_022, IL_3P49_003, IL_4A1B_088, IL_1GID_012, IL_1X8W_001, IL_4A1B_084, IL_4BPP_053, IL_4BPP_055, IL_4BPP_054, IL_3U5F_058, IL_2AW7_048, IL_4NVV_080, IL_1DQH_001, IL_3U5F_066, IL_2AW7_043, IL_4BPP_030, IL_1FJG_035, IL_4A1B_023, IL_1FJG_036, IL_3WBM_001, IL_4IOA_064, IL_4A1B_105, IL_2QUX_002, IL_3UCZ_003, IL_2VPL_002, IL_1GID_002, IL_4A1B_101, IL_4A1B_100, IL_4A1B_076, IL_4NVV_069, IL_3U5H_050, IL_1FUF_002, IL_1FUF_003, IL_3U5H_055, IL_3U5H_058, IL_4A1B_006, IL_2QBG_038, IL_1NBS_009, IL_1F7Y_002, IL_1NBS_001, IL_1NBS_002, IL_4AOB_001, IL_3DHS_002, IL_1NBS_005, IL_1JZV_005
IL_37056.1
Compare
IL_4BPP_033, IL_1S72_045, IL_3U5F_033, IL_4IOA_024IL_2QBG_086, IL_4CUV_143, IL_1FJG_022, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_2QBG_107, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4C7O_003, IL_4A1B_063, IL_2AW7_029, IL_4IOA_101, IL_3U5H_137, IL_1S72_099, IL_4CUV_108, IL_4CUX_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019IL_2QBG_097, IL_2QBG_022, IL_3SN2_002, IL_4NVV_094, IL_3U5H_031, IL_4OO8_002, IL_4A1B_113, IL_3U5H_115, IL_1S72_086, IL_3SNP_002, IL_1VW3_080, IL_4IOA_092
IL_08763.1
Compare
IL_2AW7_029, IL_1FJG_022IL_2QBG_086, IL_4CUV_143, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_2QBG_107, IL_1S72_045, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4BPP_033, IL_4C7O_003, IL_4A1B_063, IL_4IOA_101, IL_3U5H_137, IL_1S72_099, IL_4CUV_108, IL_4IOA_024, IL_4CUX_033, IL_3U5F_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019IL_2OZB_001, IL_3U5H_046

Children motifs

Child motifCommon motif instancesOnly in IL_04465.1Only in the child motif
IL_82822.1
Compare
IL_2QBG_107, IL_2NZ4_007, IL_3U5H_019, IL_1S72_042, IL_3U5H_063, IL_4A1B_063, IL_4CUV_143, IL_3D0U_005, IL_1U9S_006, IL_3U5H_137, IL_4C7O_003, IL_1S72_022, IL_1FJG_005, IL_4IOA_101, IL_1S72_099, IL_2AW7_005, IL_4FAW_014, IL_2QBG_060IL_2QBG_086, IL_1S72_045, IL_4BPP_033, IL_4CUX_033, IL_3U5F_033, IL_1FJG_022, IL_4NVV_061, IL_4CUV_067, IL_2AW7_029, IL_4NVV_107, IL_4NVV_034, IL_4CUV_108, IL_4IOA_024IL_3U5H_094, IL_1VWW_081, IL_1VW3_060, IL_4CUV_097, IL_4QCN_058, IL_3J7A_076, IL_4QCN_072, IL_2QBG_076, IL_1S72_070, IL_1MJI_001, IL_4IOA_071, IL_397D_001, IL_4A1B_091, IL_4QCN_108, IL_1VX6_096
IL_48256.1
Compare
IL_4BPP_033, IL_3U5F_033, IL_1FJG_022, IL_4CUV_108, IL_2AW7_029, IL_4IOA_024IL_2QBG_086, IL_4CUV_143, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_2QBG_107, IL_1S72_045, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4C7O_003, IL_4A1B_063, IL_4IOA_101, IL_3U5H_137, IL_1S72_099, IL_4CUX_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019IL_4CUV_149, IL_4CUV_142, IL_4BPP_022, IL_4BPP_024, IL_4CUV_146, IL_1U9S_003, IL_1VW3_064, IL_1VW3_067, IL_1VW3_069, IL_4BPP_021, IL_4CUV_136, IL_4CUV_134, IL_4CUV_130, IL_1VX6_138, IL_4BPP_025, IL_1GID_009, IL_3U5F_059, IL_3U5F_056, IL_1GID_005, IL_1GID_002, IL_1VWW_056, IL_1VWW_118, IL_1VX6_116, IL_1R3E_001, IL_1VX6_119, IL_3SNP_001, IL_4QCN_068, IL_4QCN_065, IL_3U5F_026, IL_1VX2_057, IL_3Q1Q_004, IL_2AW7_008, IL_3U5H_014, IL_2AW7_001, IL_2AW7_002, IL_4CUX_031, IL_4CUX_030, IL_3U5H_152, IL_4O26_001, IL_4CUV_089, IL_1VX6_058, IL_1VX6_057, IL_1VX6_053, IL_4BPP_064, IL_4BPP_067, IL_4CUV_101, IL_4CUV_065, IL_1DUQ_002, IL_1VW3_028, IL_4IOA_034, IL_3IVK_003, IL_1S72_096, IL_3DIR_001, IL_3DIR_005, IL_1VWW_090, IL_1VWW_158, IL_1VWW_155, IL_1R3E_002, IL_4IOA_011, IL_4LVZ_002, IL_3J7A_009, IL_3U5F_066, IL_1S72_027, IL_1S72_026, IL_3U5F_069, IL_3J7A_041, IL_1VWW_029, IL_1VWW_023, IL_2AW7_048, IL_1VX6_026, IL_2AW7_043, IL_2AW7_042, IL_4A1B_023, IL_3WBM_001, IL_3U5H_115, IL_3U5H_119, IL_3U5H_098, IL_4AOB_001, IL_4QCN_019, IL_3U5F_058, IL_4CUV_023, IL_4CUV_029, IL_4IOA_075, IL_4A1B_059, IL_4A1B_116, IL_4A1B_051, IL_4A1B_050, IL_4A1B_056, IL_2C50_001, IL_3U5H_065, IL_3D2V_001, IL_4CUX_063, IL_4CUX_066, IL_3U5H_077, IL_3TZR_002, IL_4CUV_158, IL_4CUV_150, IL_4BPP_016, IL_4BPP_013, IL_2XXA_010, IL_2XXA_012, IL_2NOK_006, IL_2NOK_003, IL_3U5H_026, IL_2QBG_007, IL_1S72_064, IL_1GID_012, IL_2PLY_002, IL_1S72_104, IL_1VWW_062, IL_1VWW_065, IL_3J7A_001, IL_1VW3_087, IL_1VWW_101, IL_1VW3_082, IL_1VWW_104, IL_1VW3_088, IL_4LGT_002, IL_2PJP_001, IL_4QCN_055, IL_2QBG_073, IL_3U5F_031, IL_2QBG_070, IL_1VX2_060, IL_3SUX_001, IL_3U5H_025, IL_2AW7_017, IL_4A1B_011, IL_4A1B_010, IL_3U5H_142, IL_3U5H_143, IL_3U5H_140, IL_2AW7_019, IL_4CUX_025, IL_1VX6_061, IL_1VX6_066, IL_1VX6_103, IL_1VX6_100, IL_1VX6_105, IL_2IZM_001, IL_4CUV_059, IL_4CUV_056, IL_4CUV_051, IL_4CUV_119, IL_1FJG_016, IL_1FJG_014, IL_4A1B_123, IL_4A1B_121, IL_4A1B_124, IL_4B5R_001, IL_4CUX_053, IL_2IZ9_001, IL_2ZY6_002, IL_1VW3_041, IL_1FJG_043, IL_4FRG_002, IL_4BPP_053, IL_4BPP_055, IL_4BPP_054, IL_1DQH_001, IL_3R2D_001, IL_3UCZ_002, IL_1VX2_022, IL_1VX2_024, IL_1S72_030, IL_2QBG_038, IL_3J7A_051, IL_3J7A_052, IL_1VWW_031, IL_3J7A_056, IL_3J7A_059, IL_1VWW_131, IL_1VWW_134, IL_1VX6_135, IL_2PN4_003, IL_4ANG_001, IL_2AW7_051, IL_3U5H_105, IL_3U5H_103, IL_3U5F_024, IL_4QCN_002, IL_1VX6_140, IL_4IOA_002, IL_1CSL_002, IL_3B31_001, IL_4A1B_044, IL_2AW7_026, IL_4A1B_113, IL_4CUX_017, IL_4CUV_017, IL_1VX6_032, IL_1VX6_033, IL_1VX6_036, IL_1VX6_037, IL_2QBG_080, IL_4BPP_009, IL_2QBG_089, IL_1FJG_040, IL_1VW3_004, IL_6MSF_001, IL_3U5H_089, IL_4CUV_016, IL_2OIU_003, IL_2OIU_001, IL_2C4Z_001, IL_1S72_077, IL_1S72_074, IL_1VWW_079, IL_3J7A_014, IL_1S72_040, IL_1VW3_091, IL_2QBG_069, IL_4QCN_044, IL_2QBG_104, IL_3U5F_009, IL_1S72_002, IL_3U5F_001, IL_3D0U_001, IL_1VWW_001, IL_3U5H_013, IL_2A64_003, IL_2A64_002, IL_1VX6_001, IL_1X8W_001, IL_4C7O_001, IL_3U5H_034, IL_3U5H_030, IL_3U5H_136, IL_3U5H_131, IL_3U5H_039, IL_1S03_006, IL_1S03_005, IL_4QCN_037, IL_4QCN_034, IL_4A1B_095, IL_4CUV_042, IL_1FJG_007, IL_4IOA_016, IL_1FJG_001, IL_1FJG_002, IL_4IOA_015, IL_1VX6_090, IL_4A1B_131, IL_1VX6_093, IL_3MEI_001, IL_2VPL_002, IL_2QBG_099, IL_3P49_003, IL_4BPP_031, IL_4BPP_030, IL_2QUX_002, IL_1VW3_052, IL_1VW3_055, IL_1F7Y_002, IL_4CUV_123, IL_4L8H_001, IL_3SN2_001, IL_1VX2_030, IL_2QBG_023, IL_1VWW_045, IL_1VWW_123, IL_1VX6_126, IL_1VX6_129, IL_4FAW_004, IL_1ET4_004, IL_1ET4_002, IL_4QCN_076, IL_1I9X_001, IL_1I9X_002, IL_4IOA_057, IL_4IOA_031, IL_4A1B_076, IL_3U5H_003, IL_3U5H_002, IL_4A1B_072, IL_4CUV_093, IL_4CUV_094, IL_4CUX_001, IL_1U9S_001, IL_3GX5_001, IL_3IWN_004, IL_3IWN_003, IL_1VX6_044, IL_1VX6_040, IL_4BPP_075, IL_4BPP_072, IL_4CUV_076, IL_1VW3_018, IL_1VW3_019, IL_1MFQ_005, IL_3OWZ_005, IL_1JZV_002, IL_3OWZ_001, IL_3U5H_092, IL_3U5H_093, IL_4CUV_002, IL_4CUV_003, IL_2BQ5_001, IL_4A1C_003, IL_4A1C_002, IL_2BU1_001, IL_3UCZ_003, IL_1S72_086, IL_1S72_088, IL_3J7A_021, IL_3W3S_001, IL_3W3S_002, IL_1VWW_080, IL_3J7A_025, IL_3J7A_027, IL_2IZN_001, IL_4KZD_001, IL_1U63_002, IL_2QBG_035, IL_3U5F_016, IL_1S72_010, IL_3U5F_018, IL_1S72_014, IL_1VWW_014, IL_1VWW_017, IL_4A1B_039, IL_1VX6_014, IL_4QCN_098, IL_1VX6_016, IL_4A1B_031, IL_4A1B_036, IL_3U5H_129, IL_3U5H_125, IL_4QCN_020, IL_4A1B_088, IL_1S72_067, IL_4C7O_004, IL_4A1B_084, IL_4CUV_037, IL_4CUV_034, IL_1FJG_035, IL_1FJG_036, IL_4IOA_064, IL_1JZV_005, IL_4A1B_105, IL_4A1B_101, IL_4A1B_100, IL_3U5H_050, IL_1FUF_002, IL_1FUF_003, IL_3U5H_055, IL_3U5H_058, IL_4A1B_006, IL_3DHS_003, IL_1NBS_009, IL_1NBS_001, IL_1NBS_002, IL_3DHS_002, IL_1NBS_005
IL_18916.1
Compare
IL_2QBG_086, IL_4CUV_067IL_4CUV_143, IL_1FJG_022, IL_4CUV_108, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_2QBG_107, IL_1S72_045, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4BPP_033, IL_4C7O_003, IL_4A1B_063, IL_2AW7_029, IL_4IOA_101, IL_3U5H_137, IL_1S72_099, IL_4IOA_024, IL_4CUX_033, IL_3U5F_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019IL_1KXK_003, IL_1S72_093, IL_4CUX_087, IL_3U5F_086, IL_4QCN_081
IL_55210.1
Compare
IL_1S72_045IL_2QBG_086, IL_4CUV_143, IL_1FJG_022, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2AW7_005, IL_2QBG_107, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_2NZ4_007, IL_4BPP_033, IL_4C7O_003, IL_4A1B_063, IL_2AW7_029, IL_4IOA_101, IL_3U5H_137, IL_1S72_099, IL_4CUV_108, IL_4IOA_024, IL_4CUX_033, IL_3U5F_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019
IL_68034.1
Compare
IL_4CUX_033IL_2QBG_086, IL_4CUV_143, IL_1FJG_022, IL_4CUV_067, IL_1FJG_005, IL_4FAW_014, IL_2QBG_107, IL_1S72_045, IL_1S72_042, IL_3U5H_063, IL_2QBG_060, IL_3D0U_005, IL_4NVV_061, IL_1S72_022, IL_4NVV_107, IL_3U5H_137, IL_2NZ4_007, IL_4BPP_033, IL_4C7O_003, IL_4A1B_063, IL_2AW7_029, IL_4IOA_101, IL_2AW7_005, IL_1S72_099, IL_4CUV_108, IL_4IOA_024, IL_3U5F_033, IL_1U9S_006, IL_4NVV_034, IL_3U5H_019IL_4IOA_099
Annotations
  • (21)
  • Multiple bulged bases (H) (2)
  • Single bulged G (2)
  • Single bulged G (H) (1)
  • Bulged stacked bases (H) (1)
  • Major groove intercalation (H) (1)
  • Major groove intercalation (1)
  • Single bulged C (1)
  • Single bulged C (H) (1)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.09 | Avg 0.50 | Max 1.00
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