6W7W Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/12:22 | NA | NA | ||
| 1/2/83:86 | NA | NA | ||
| 1/2/158:163 | NA | NA | ||
| 1/2/186:191 | NA | NA | ||
| 1/2/206:213 | NA | NA | ||
| 1/2/259:267 | NA | NA | ||
| 1/2/296:301 | NA | NA | ||
| 1/2/320:333 | NA | NA | ||
| 1/2/342:347 | NA | NA | ||
| 1/2/379:384 | NA | NA | ||
| 1/2/419:424 | NA | NA | ||
| 1/2/462:470 | NA | NA | ||
| 1/2/522:527 | NA | NA | ||
| 1/2/617:623 | NA | NA | ||
| 1/2/726:731 | NA | NA | ||
| 1/2/840:846 | NA | NA | ||
| 1/2/862:867 | NA | NA | ||
| 1/2/897:902 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6W7W_015 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/30:32, 1/2/552:553 | NA | NA | ||
| 1/2/44:45, 1/2/396:398 | NA | NA | ||
| 1/2/47:52, 1/2/359:361 | NA | NA | ||
| 1/2/54:56, 1/2/356:357 | NA | NA | ||
| 1/2/63:66, 1/2/103:104 | NA | NA | ||
| 1/2/67:69, 1/2/99:102 | NA | NA | ||
| 1/2/70:73, 1/2/97:98 | NA | NA | ||
| 1/2/75:76, 1/2/93:95 | NA | NA | ||
| 1/2/128:131, 1/2/231:233 | NA | NA | ||
| 1/2/132:136, 1/2/227:230 | NA | NA | ||
| 1/2/144:146, 1/2/176:178 | NA | NA | ||
| 1/2/147:153, 1/2/168:175 | NA | NA | ||
| 1/2/203:206, 1/2/213:214 | NA | NA | ||
| 1/2/242:247, 1/2/277:284 | NA | NA | ||
| 1/2/249:252, 1/2/274:275 | NA | NA | ||
| 1/2/292:293, 1/2/304:308 | NA | NA | ||
| 1/2/367:369, 1/2/392:393 | NA | NA | ||
| 1/2/371:375, 1/2/389:390 | NA | NA | ||
| 1/2/375:376, 1/2/387:389 | NA | NA | ||
| 1/2/409:416, 1/2/427:433 | NA | NA | ||
| 1/2/440:442, 1/2/492:497 | NA | NA | ||
| 1/2/446:450, 1/2/483:488 | NA | NA | ||
| 1/2/450:454, 1/2/479:483 | NA | NA | ||
| 1/2/454:455, 1/2/477:479 | NA | NA | ||
| 1/2/504:511, 1/2/540:541 | NA | NA | ||
| 1/2/515:521, 1/2/528:536 | NA | NA | ||
| 1/2/569:575, 1/2/880:881 | NA | NA | ||
| 1/2/580:584, 1/2/757:761 | NA | NA | ||
| 1/2/594:596, 1/2/644:645 | NA | NA | ||
| 1/2/597:598, 1/2/640:643 | NA | NA | ||
| 1/2/605:613, 1/2/627:633 | NA | NA | ||
| 1/2/654:655, 1/2/751:754 | NA | NA | ||
| 1/2/658:659, 1/2/746:748 | NA | NA | ||
| 1/2/662:666, 1/2/740:743 | NA | NA | ||
| 1/2/773:775, 1/2/805:806 | NA | NA | ||
| 1/2/775:779, 1/2/803:805 | NA | NA | ||
| 1/2/779:783, 1/2/799:803 | NA | NA | ||
| 1/2/887:895, 1/2/904:910 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/2/46:47, 1/2/361:367, 1/2/393:395 | NA | NA | ||
| 1/2/586:588, 1/2/651:654, 1/2/754:755 | NA | NA | ||
| 1/2/672:673, 1/2/717:725, 1/2/732:734 | NA | NA | ||
| 1/2/826:829, 1/2/857:861, 1/2/868:874 | NA | NA |
Problematic loops
No problematic loops
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