Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/A/190B:190GNANA
1/A/450:483NANA
1/A/522:527NANA
1/A/617:623NANA
1/A/689:698NANA
1/A/838:848NANA
1/A/963:972NANA
1/A/1124:1149NANA
1/A/1165:1171NANA
1/A/1515:1520NANA

Problematic loops

#loop idProblemSequence
HL_1XMO_001NA
HL_1XMO_002NA
HL_1XMO_003NA
HL_1XMO_005NA
HL_1XMO_006NA
HL_1XMO_007NA
HL_1XMO_008NA
HL_1XMO_009NA
HL_1XMO_010NA
HL_1XMO_015NA
HL_1XMO_016NA
HL_1XMO_018NA
HL_1XMO_019NA
HL_1XMO_021NA
HL_1XMO_022NA
HL_1XMO_023NA
HL_1XMO_024NA
HL_1XMO_027NA
HL_1XMO_028NA
HL_1XMO_029NA
HL_1XMO_030NA

Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/A/30:32,
1/A/552:553
NANA
1/A/47:52,
1/A/359:361
NANA
1/A/54:56,
1/A/356:357
NANA
1/A/132:136,
1/A/227:230
NANA
1/A/186:188,
1/A/190K:191
NANA
1/A/189:190A,
1/A/190H:190J
NANA
1/A/242:247,
1/A/277:284
NANA
1/A/292:293,
1/A/304:308
NANA
1/A/446:450,
1/A/483:488
NANA
1/A/514:521,
1/A/528:537
NANA
1/A/605:612,
1/A/628:633
NANA
1/A/662:666,
1/A/740:743
NANA
1/A/925:927,
1/A/1390:1391
NANA
1/A/1052:1056,
1/A/1204:1206
NANA
1/A/1056:1058,
1/A/1199:1204
NANA
1/A/1247:1253,
1/A/1284:1290
NANA
1/A/1255:1258,
1/A/1277:1282
NANA
1/A/1399:1401,
1/A/1501:1504
NANA
1/A/1401:1404,
1/A/1497:1501
NANA
1/A/1405:1407,
1/A/1494:1496
NANA
1/A/1407:1409,
1/A/1491:1494
NANA

Problematic loops

#loop idProblemSequence
IL_1XMO_002NA
IL_1XMO_005NA
IL_1XMO_006NA
IL_1XMO_007NA
IL_1XMO_009NA
IL_1XMO_013NA
IL_1XMO_015NA
IL_1XMO_016NA
IL_1XMO_017NA
IL_1XMO_019NA
IL_1XMO_021NA
IL_1XMO_022NA
IL_1XMO_023NA
IL_1XMO_024NA
IL_1XMO_026NA
IL_1XMO_027NA
IL_1XMO_029NA
IL_1XMO_030NA
IL_1XMO_031NA
IL_1XMO_032NA
IL_1XMO_033NA
IL_1XMO_034NA
IL_1XMO_036NA
IL_1XMO_037NA
IL_1XMO_038NA
IL_1XMO_039NA
IL_1XMO_040NA
IL_1XMO_041NA
IL_1XMO_044NA
IL_1XMO_045NA
IL_1XMO_046NA
IL_1XMO_049NA
IL_1XMO_050NA
IL_1XMO_055NA
IL_1XMO_056NA
IL_1XMO_057NA
IL_1XMO_058NA
IL_1XMO_059NA

Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/A/826:829,
1/A/857:861,
1/A/868:874
NANA
1/A/936:939,
1/A/1344:1350,
1/A/1372:1379
NANA
1/A/955:962,
1/A/973:984,
1/A/1221:1225
NANA
1/A/1063:1068,
1/A/1107:1113,
1/A/1187:1193
NANA
1/A/1116:1118,
1/A/1155:1158,
1/A/1181:1184
NANA
1/A/1237:1241,
1/A/1296:1303,
1/A/1334:1337
NANA

Problematic loops

#loop idProblemSequence
J3_1XMO_003NA
J3_1XMO_005NA
J3_1XMO_006NA

Coloring options:
Copyright 2023 BGSU RNA group. Page generated in 0.0847 s