7V2N Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/12:24 | NA | NA | ||
| 1/A/151:160 | NA | NA | ||
| 1/A/187:192 | NA | NA | ||
| 1/A/208:212 | NA | NA | ||
| 1/A/255:263 | NA | NA | ||
| 1/A/292:297 | NA | NA | ||
| 1/A/316:329 | NA | NA | ||
| 1/A/375:380 | NA | NA | ||
| 1/A/415:420 | NA | NA | ||
| 1/A/453:459 | NA | NA | ||
| 1/A/506:511 | NA | NA | ||
| 1/A/601:607 | NA | NA | ||
| 1/A/673:682 | NA | NA | ||
| 1/A/710:715 | NA | NA | ||
| 1/A/822:826 | NA | NA | ||
| 1/A/840:845 | NA | NA | ||
| 1/A/875:880 | NA | NA | ||
| 1/A/941:950 | NA | NA | ||
| 1/A/1059:1064 | NA | NA | ||
| 1/A/1072:1079 | NA | NA | ||
| 1/A/1117:1123 | NA | NA | ||
| 1/A/1148:1153 | NA | NA | ||
| 1/A/1247:1252 | NA | NA | ||
| 1/A/1296:1305 | NA | NA | ||
| 1/A/1493:1498 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7V2N_002 | NA | ||
| HL_7V2N_009 | NA | ||
| HL_7V2N_017 | NA | ||
| HL_7V2N_022 | NA | ||
| HL_7V2N_029 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/31:33, 1/A/536:537 | NA | NA | ||
| 1/A/45:46, 1/A/392:394 | NA | NA | ||
| 1/A/48:53, 1/A/355:357 | NA | NA | ||
| 1/A/55:58, 1/A/351:353 | NA | NA | ||
| 1/A/64:67, 1/A/97:98 | NA | NA | ||
| 1/A/68:70, 1/A/94:96 | NA | NA | ||
| 1/A/123:126, 1/A/227:228 | NA | NA | ||
| 1/A/127:134, 1/A/220:226 | NA | NA | ||
| 1/A/143:148, 1/A/163:169 | NA | NA | ||
| 1/A/181:183, 1/A/196:198 | NA | NA | ||
| 1/A/238:243, 1/A/273:280 | NA | NA | ||
| 1/A/245:248, 1/A/270:271 | NA | NA | ||
| 1/A/288:289, 1/A/300:304 | NA | NA | ||
| 1/A/363:365, 1/A/388:389 | NA | NA | ||
| 1/A/365:372, 1/A/383:388 | NA | NA | ||
| 1/A/403:405, 1/A/429:431 | NA | NA | ||
| 1/A/405:412, 1/A/423:429 | NA | NA | ||
| 1/A/487:496, 1/A/523:526 | NA | NA | ||
| 1/A/499:505, 1/A/512:520 | NA | NA | ||
| 1/A/553:559, 1/A/858:859 | NA | NA | ||
| 1/A/564:568, 1/A/741:745 | NA | NA | ||
| 1/A/578:580, 1/A/628:629 | NA | NA | ||
| 1/A/581:582, 1/A/624:627 | NA | NA | ||
| 1/A/589:596, 1/A/612:617 | NA | NA | ||
| 1/A/638:639, 1/A/735:738 | NA | NA | ||
| 1/A/641:642, 1/A/731:733 | NA | NA | ||
| 1/A/646:650, 1/A/724:727 | NA | NA | ||
| 1/A/657:662, 1/A/696:701 | NA | NA | ||
| 1/A/667:672, 1/A/683:691 | NA | NA | ||
| 1/A/758:762, 1/A/788:789 | NA | NA | ||
| 1/A/763:767, 1/A/783:787 | NA | NA | ||
| 1/A/865:872, 1/A/883:888 | NA | NA | ||
| 1/A/899:902, 1/A/1375:1379 | NA | NA | ||
| 1/A/903:905, 1/A/1373:1374 | NA | NA | ||
| 1/A/911:913, 1/A/1363:1367 | NA | NA | ||
| 1/A/931:932, 1/A/1208:1210 | NA | NA | ||
| 1/A/971:975, 1/A/1027:1028 | NA | NA | ||
| 1/A/1031:1033, 1/A/1190:1191 | NA | NA | ||
| 1/A/1035:1039, 1/A/1186:1188 | NA | NA | ||
| 1/A/1040:1041, 1/A/1181:1185 | NA | NA | ||
| 1/A/1043:1044, 1/A/1177:1179 | NA | NA | ||
| 1/A/1044:1046, 1/A/1175:1177 | NA | NA | ||
| 1/A/1107:1111, 1/A/1127:1132 | NA | NA | ||
| 1/A/1112:1115, 1/A/1125:1126 | NA | NA | ||
| 1/A/1229:1235, 1/A/1266:1272 | NA | NA | ||
| 1/A/1237:1240, 1/A/1259:1264 | NA | NA | ||
| 1/A/1241:1242, 1/A/1256:1258 | NA | NA | ||
| 1/A/1242:1244, 1/A/1255:1256 | NA | NA | ||
| 1/A/1285:1290, 1/A/1311:1316 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/47:48, 1/A/357:363, 1/A/389:391 | NA | NA | ||
| 1/A/570:572, 1/A/635:638, 1/A/738:739 | NA | NA | ||
| 1/A/656:657, 1/A/701:709, 1/A/716:718 | NA | NA | ||
| 1/A/810:813, 1/A/835:839, 1/A/846:852 | NA | NA | ||
| 1/A/920:924, 1/A/1217:1219, 1/A/1319:1323 | NA | NA | ||
| 1/A/932:940, 1/A/951:962, 1/A/1203:1208 | NA | NA | ||
| 1/A/968:971, 1/A/1028:1030, 1/A/1192:1197 | NA | NA | ||
| 1/A/1046:1051, 1/A/1090:1096, 1/A/1169:1175 | NA | NA | ||
| 1/A/1056:1057, 1/A/1066:1070, 1/A/1081:1085 | NA | NA | ||
| 1/A/1099:1101, 1/A/1138:1144, 1/A/1157:1166 | NA | NA | ||
| 1/A/1219:1223, 1/A/1278:1285, 1/A/1316:1319 | NA | NA |
Problematic loops
No problematic loops
Coloring options: