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1I97 Internal, Hairpin and 3-way Junction Loop Motifs

Download loops

Valid loops

#loop idlocationannotationmotif
1➜1/A/12:22NANA
2➜1/A/78:84NANA
3➜1/A/152:157NANA
4➜1/A/186:191NANA
5➜1/A/206:212NANA
6➜1/A/252:264NANA
7➜1/A/291:296NANA
8➜1/A/315:328NANA
9➜1/A/336:343NANA
10➜1/A/374:379NANA
11➜1/A/414:419NANA
12➜1/A/452:458NANA
13➜1/A/505:510NANA
14➜1/A/600:606NANA
15➜1/A/672:681NANA
16➜1/A/708:715NANA
17➜1/A/769:779NANA
18➜1/A/820:826NANA
19➜1/A/874:879NANA
20➜1/A/940:949NANA
21➜1/A/990:995NANA
22➜1/A/1008:1013NANA
23➜1/A/1058:1063NANA
24➜1/A/1071:1078NANA
25➜1/A/1114:1124NANA
26➜1/A/1144:1155NANA
27➜1/A/1246:1251NANA
28➜1/A/1295:1304NANA
29➜1/A/1336:1349NANA
30➜1/A/1429:1434NANA
31➜1/A/1492:1497NANA

Problematic loops

No problematic loops

Valid loops

#loop idlocationannotationmotif
1➜1/A/30:32,1/A/535:536NANA
2➜1/A/44:45,1/A/391:393NANA
3➜1/A/63:67,1/A/95:97NANA
4➜1/A/67:69,1/A/93:95NANA
5➜1/A/76:78,1/A/84:86NANA
6➜1/A/115:117,1/A/232:234NANA
7➜1/A/122:125,1/A/226:227NANA
8➜1/A/126:131,1/A/221:225NANA
9➜1/A/142:148,1/A/161:168NANA
10➜1/A/180:182,1/A/195:197NANA
11➜1/A/182:184,1/A/193:195NANA
12➜1/A/237:244,1/A/270:279NANA
13➜1/A/244:248,1/A/268:270NANA
14➜1/A/286:289,1/A/298:304NANA
15➜1/A/362:364,1/A/387:388NANA
16➜1/A/366:370,1/A/384:385NANA
17➜1/A/370:371,1/A/382:384NANA
18➜1/A/404:412,1/A/421:428NANA
19➜1/A/440:444,1/A/467:472NANA
20➜1/A/444:449,1/A/461:467NANA
21➜1/A/487:494,1/A/523:524NANA
22➜1/A/497:505,1/A/510:520NANA
23➜1/A/561:567,1/A/740:746NANA
24➜1/A/567:569,1/A/738:740NANA
25➜1/A/575:577,1/A/628:630NANA
26➜1/A/577:579,1/A/627:628NANA
27➜1/A/580:581,1/A/623:626NANA
28➜1/A/587:595,1/A/611:617NANA
29➜1/A/637:638,1/A/734:737NANA
30➜1/A/640:641,1/A/730:732NANA
31➜1/A/645:650,1/A/722:726NANA
32➜1/A/666:672,1/A/681:690NANA
33➜1/A/757:761,1/A/787:788NANA
34➜1/A/762:766,1/A/782:786NANA
35➜1/A/809:812,1/A/834:851NANA
36➜1/A/815:817,1/A/829:831NANA
37➜1/A/818:820,1/A/826:828NANA
38➜1/A/899:902,1/A/1373:1377NANA
39➜1/A/902:904,1/A/1372:1373NANA
40➜1/A/904:906,1/A/1370:1372NANA
41➜1/A/910:913,1/A/1361:1366NANA
42➜1/A/918:920,1/A/1321:1323NANA
43➜1/A/925:927,1/A/1212:1214NANA
44➜1/A/930:931,1/A/1207:1209NANA
45➜1/A/986:989,1/A/996:999NANA
46➜1/A/1030:1032,1/A/1189:1190NANA
47➜1/A/1033:1038,1/A/1185:1188NANA
48➜1/A/1039:1040,1/A/1180:1184NANA
49➜1/A/1042:1045,1/A/1174:1178NANA
50➜1/A/1103:1110,1/A/1125:1134NANA
51➜1/A/1110:1114,1/A/1124:1125NANA
52➜1/A/1227:1234,1/A/1265:1272NANA
53➜1/A/1235:1240,1/A/1257:1264NANA
54➜1/A/1240:1241,1/A/1255:1257NANA
55➜1/A/1241:1243,1/A/1254:1255NANA
56➜1/A/1284:1289,1/A/1310:1315NANA
57➜1/A/1383:1386,1/A/1474:1478NANA
58➜1/A/1387:1389,1/A/1471:1473NANA
59➜1/A/1389:1391,1/A/1468:1471NANA
60➜1/A/1393:1396,1/A/1463:1466NANA
61➜1/A/1397:1403,1/A/1456:1462NANA
62➜1/A/1405:1407,1/A/1452:1454NANA
63➜1/A/1407:1409,1/A/1450:1452NANA
64➜1/A/1413:1417,1/A/1443:1446NANA
65➜1/A/1417:1420,1/A/1440:1443NANA
66➜1/A/1422:1427,1/A/1436:1438NANA
67➜1/A/1487:1489,1/A/1500:1502NANA
68➜1/A/1489:1491,1/A/1498:1500NANA

Problematic loops

#loop idProblemSequence
1➜NA
2➜NA
3➜NA
4➜NA
5➜NA
6➜NA
7➜NA
8➜NA
9➜NA
10➜NA
11➜NA
12➜NA
13➜NA
14➜NA
15➜NA
16➜NA
17➜NA

Valid loops

#loop idlocationannotationmotif
1➜1/A/46:52,1/A/354:362,1/A/388:390NANA
2➜1/A/931:939,1/A/950:961,1/A/1202:1207NANA
3➜1/A/967:977,1/A/1023:1029,1/A/1191:1196NANA
4➜1/A/980:984,1/A/1001:1006,1/A/1015:1020NANA
5➜1/A/1045:1050,1/A/1089:1096,1/A/1167:1174NANA
6➜1/A/1055:1058,1/A/1063:1069,1/A/1080:1084NANA
7➜1/A/1098:1100,1/A/1137:1143,1/A/1156:1165NANA

Problematic loops

No problematic loops


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