Valid loops

#loop idlocationmotif
11/A/30:32,1/A/552:553NA
21/A/44:45,1/A/396:398NA
31/A/47:52,1/A/359:361NA
41/A/54:57,1/A/355:357NA
51/A/63:66,1/A/103:104NA
61/A/67:69,1/A/99:102NA
71/A/128:131,1/A/231:233NA
81/A/132:136,1/A/227:230NA
91/A/186:188,1/A/190K:191NA
101/A/242:247,1/A/277:284NA
111/A/248:252,1/A/274:276NA
121/A/292:293,1/A/304:308NA
131/A/370:375,1/A/389:391NA
141/A/375:377,1/A/386:389NA
151/A/409:417,1/A/426:433NA
161/A/446:450,1/A/483:488NA
171/A/450:456,1/A/476:483NA
181/A/504:511,1/A/540:541NA
191/A/515:521,1/A/528:536NA
201/A/605:612,1/A/628:633NA
211/A/662:666,1/A/740:743NA
221/A/673:679,1/A/711:717NA
231/A/683:688,1/A/699:707NA
241/A/922:923,1/A/1393:1395NA
251/A/925:927,1/A/1390:1391NA
261/A/933:935,1/A/1380:1384NA
271/A/953:954,1/A/1226:1228NA
281/A/1047:1051,1/A/1207:1210NA
291/A/1051:1056,1/A/1204:1207NA
301/A/1056:1059,1/A/1198:1204NA
311/A/1059:1061,1/A/1195:1198NA
321/A/1061:1063,1/A/1193:1195NA
331/A/1121:1128,1/A/1143:1152NA
341/A/1247:1253,1/A/1284:1290NA
351/A/1253:1258,1/A/1277:1284NA
361/A/1303:1308,1/A/1329:1334NA
371/A/1401:1404,1/A/1497:1501NA
381/A/1404:1407,1/A/1494:1497NA
391/A/1407:1409,1/A/1491:1494NA
401/A/1412:1414,1/A/1486:1488NA
411/A/1414:1416,1/A/1484:1486NA
421/A/1435:1438,1/A/1463:1466NA
431/A/1440:1447,1/A/1459:1461NA

Problematic loops

#loop idProblemSequence
169, 70, 73, 74, 75, 76, 77, 92, 93, 95, 96, 97, 98, 99
2148, 149, 150, 151, 152, 153, 168, 169, 170, 171, 172, 173, 174
3CUCC,GGAG
4GGA,UCC
5CUCC,GGAG
6569, 570, 571, 572, 573, 574, 575, 880, 881
7580, 581, 582, 583, 584, 757, 758, 759, 760, 761
8594, 595, 596, 644, 645
9597, 598, 640, 641, 642, 643
10654, 655, 751, 752, 753, 754
11657, 658, 747, 748, 749
12774, 775, 776, 777, 778, 804, 805
13779, 780, 781, 782, 783, 784, 798, 799, 800, 801, 802, 803
14887, 888, 889, 890, 891, 892, 893, 894, 905, 906, 907, 908, 909, 910
15948, 949, 950, 1231, 1232, 1233
161028, 1029, 1030, 1031, 1032, 1033
17CCCG,CGGG
181258, 1259, 1260, 1261, 1262, 1273, 1274, 1275, 1276, 1277
19CCG,CGG
20GUC,GAC
21CGCC,GGCG
221416, 1417, 1418, 1419, 1481, 1482, 1483, 1484
23CGGGC,GCCCG
241431, 1432, 1433, 1434, 1435, 1466, 1467, 1468, 1469

Valid loops

#loop idlocationmotif
11/A/12:22NA
21/A/158:163NA
31/A/190B:190GNA
41/A/199:218NA
51/A/259:267NA
61/A/296:301NA
71/A/320:333NA
81/A/377:386NA
91/A/419:424NA
101/A/457:475NA
111/A/522:527NA
121/A/617:623NA
131/A/689:698NA
141/A/786:796NA
151/A/838:848NA
161/A/963:972NA
171/A/1076:1081NA
181/A/1089:1096NA
191/A/1164:1172NA
201/A/1449:1454NA
211/A/1515:1520NA

Problematic loops

#loop idProblemSequence
179, 80, 81, 82, 83, 84, 88, 89, 90
2342, 343, 344, 345, 346, 347
3726, 727, 728, 729, 730, 731
4862, 863, 864, 865, 866, 867
5897, 898, 899, 900, 901, 902
61007, 1008, 1009, 1010, 1011, 1012, 1013, 1014, 1015, 1016, 1017, 1018, 1019, 1020, 1021, 1022
71030, 1030, 1030, 1030, 1030, 1031
81128, 1129, 1130, 1131, 1132, 1133, 1134, 1135, 1136, 1137, 1138, 1139, 1140, 1141, 1142, 1143
91265, 1266, 1267, 1268, 1269, 1270
101314, 1315, 1316, 1317, 1318, 1319, 1320, 1321, 1322, 1323
111356, 1357, 1358, 1359, 1360, 1361, 1361, 1362, 1363, 1364, 1365, 1366

Valid loops

#loop idlocationmotif
11/A/826:829,1/A/857:861,1/A/868:874NA
21/A/936:939,1/A/1344:1350,1/A/1372:1379NA
31/A/941:946,1/A/1235:1237,1/A/1337:1342NA
41/A/955:962,1/A/973:985,1/A/1220:1225NA
51/A/1063:1068,1/A/1107:1113,1/A/1187:1193NA
61/A/1116:1118,1/A/1155:1161,1/A/1175:1184NA
71/A/1237:1241,1/A/1296:1303,1/A/1334:1337NA

Problematic loops

#loop idProblemSequence
1989, 990, 991, 992, 993, 994, 995, 996, 997, 998, 999, 1000, 1041, 1042, 1043, 1044, 1045, 1046, 1047, 1210, 1211, 1212, 1213, 1214, 1215, 1216
21001, 1002, 1003, 1003, 1004, 1005, 1006, 1007, 1022, 1023, 1024, 1025, 1026, 1027, 1028, 1033, 1034, 1035, 1036, 1037, 1038, 1039, 1040

Coloring options: