Valid loops

#loop idlocationmotif
11/5/5:7,1/8/152:154NA
21/5/7:8,1/8/150:152NA
31/5/13:15,1/8/144:145NA
41/5/27:28,1/5/56:58NA
51/5/31:38,1/5/45:53NA
61/5/82:89,1/5/97:103NA
71/5/123:124,1/5/144:149NA
81/5/125:127,1/5/141:143NA
91/5/163:165,1/5/257:258NA
101/5/169:174,1/5/244:253NA
111/5/177:179,1/5/237:241NA
121/5/189:191,1/5/204:205NA
131/5/337:339,1/8/25:26NA
141/5/376:379,1/5/390:403NA
151/5/404:410,1/8/13:19NA
161/5/429:431,1/5/628:630NA
171/5/512:513,1/5/577:579NA
181/5/517:525,1/5/567:573NA
191/5/531:538,1/5/553:561NA
201/5/668:670,1/5/792:794NA
211/5/680:684,1/5/696:700NA
221/5/725:728,1/5/741:745NA
231/5/752:753,1/5/779:781NA
241/5/755:756,1/5/775:777NA
251/5/758:763,1/5/768:773NA
261/5/803:805,1/5/938:940NA
271/5/805:809,1/5/931:938NA
281/5/828:829,1/5/895:897NA
291/5/833:834,1/5/859:861NA
301/5/834:838,1/5/855:859NA
311/5/869:872,1/5/888:890NA
321/5/873:875,1/5/886:887NA
331/5/907:909,1/5/919:923NA
341/5/954:956,1/5/965:967NA
351/5/969:970,1/5/1111:1113NA
361/5/977:982,1/5/1101:1104NA
371/5/983:985,1/5/1099:1100NA
381/5/991:997,1/5/1052:1058NA
391/5/997:998,1/5/1050:1052NA
401/5/999:1004,1/5/1046:1049NA
411/5/1006:1009,1/5/1041:1044NA
421/5/1009:1011,1/5/1039:1041NA
431/5/1013:1015,1/5/1035:1037NA
441/5/1015:1018,1/5/1034:1035NA
451/5/1018:1020,1/5/1032:1034NA
461/5/1020:1023,1/5/1029:1032NA
471/5/1069:1071,1/5/1087:1089NA
481/5/1074:1076,1/5/1083:1084NA
491/5/1120:1122,1/5/1136:1138NA
501/5/1123:1125,1/5/1133:1135NA
511/5/1167:1171,1/5/1328:1332NA
521/5/1173:1180,1/5/1325:1326NA
531/5/1180:1182,1/5/1324:1325NA
541/5/1187:1194,1/5/1314:1319NA
551/5/1194:1205,1/5/1299:1314NA
561/5/1207:1209,1/5/1296:1297NA
571/5/1376:1378,1/5/1428:1431NA
581/5/1385:1387,1/5/1420:1421NA
591/5/1388:1395,1/5/1415:1419NA
601/5/1398:1400,1/5/1411:1412NA
611/5/1444:1450,1/5/2354:2359NA
621/5/1492:1495,1/5/1835:1836NA
631/5/1500:1505,1/5/1513:1516NA
641/5/1532:1536,1/5/1585:1590NA
651/5/1618:1621,1/5/1824:1826NA
661/5/1623:1625,1/5/1818:1822NA
671/5/1625:1627,1/5/1816:1818NA
681/5/1627:1631,1/5/1811:1816NA
691/5/1645:1649,1/5/1806:1810NA
701/5/1661:1663,1/5/1786:1788NA
711/5/1669:1670,1/5/1778:1780NA
721/5/1670:1671,1/5/1776:1778NA
731/5/1694:1698,1/5/1747:1752NA
741/5/1702:1707,1/5/1737:1743NA
751/5/1711:1717,1/5/1727:1733NA
761/5/1883:1889,1/5/2346:2349NA
771/5/1895:1897,1/5/2338:2340NA
781/5/1898:1901,1/5/2336:2337NA
791/5/1901:1906,1/5/2333:2336NA
801/5/1918:1923,1/5/1928:1934NA
811/5/1940:1942,1/5/2106:2108NA
821/5/1947:1948,1/5/2098:2101NA
831/5/2128:2129,1/5/2323:2325NA
841/5/2156:2161,1/5/2173:2180NA
851/5/2196:2199,1/5/2245:2246NA
861/5/2200:2201,1/5/2241:2244NA
871/5/2204:2206,1/5/2237:2238NA
881/5/2276:2277,1/5/2307:2310NA
891/5/2277:2288,1/5/2304:2307NA
901/5/2391:2394,1/5/2986:2988NA
911/5/2396:2398,1/5/2981:2984NA
921/5/2409:2411,1/5/2811:2812NA
931/5/2412:2413,1/5/2807:2810NA
941/5/2423:2425,1/5/2604:2607NA
951/5/2520:2526,1/5/2584:2587NA
961/5/2614:2615,1/5/2625:2627NA
971/5/2666:2668,1/5/2686:2690NA
981/5/2714:2716,1/5/2740:2741NA
991/5/2718:2721,1/5/2735:2738NA
1001/5/2770:2773,1/5/2787:2788NA
1011/5/2823:2824,1/5/2865:2867NA
1021/5/2824:2826,1/5/2863:2865NA
1031/5/2826:2828,1/5/2862:2863NA
1041/5/2828:2830,1/5/2858:2862NA
1051/5/2835:2839,1/5/2849:2853NA
1061/5/2876:2877,1/5/2949:2951NA
1071/5/2879:2881,1/5/2943:2947NA
1081/5/2881:2882,1/5/2940:2943NA
1091/5/2889:2891,1/5/2912:2914NA
1101/5/2891:2892,1/5/2909:2912NA
1111/5/2918:2920,1/5/2926:2928NA
1121/5/2960:2961,1/5/2970:2972NA
1131/5/3004:3007,1/5/3139:3144NA
1141/5/3012:3014,1/5/3040:3042NA
1151/5/3018:3025,1/5/3030:3036NA
1161/5/3047:3051,1/5/3091:3094NA
1171/5/3054:3059,1/5/3084:3088NA
1181/5/3063:3064,1/5/3077:3080NA
1191/5/3103:3107,1/5/3127:3131NA
1201/5/3161:3166,1/5/3284:3289NA
1211/5/3168:3170,1/5/3280:3282NA
1221/5/3177:3179,1/5/3210:3211NA
1231/5/3179:3188,1/5/3204:3210NA
1241/5/3193:3194,1/5/3197:3199NA
1251/5/3225:3229,1/5/3258:3260NA
1261/5/3233:3235,1/5/3252:3254NA
1271/5/3235:3238,1/5/3249:3252NA
1281/5/3300:3303,1/5/3311:3314NA
1291/5/3318:3320,1/5/3387:3388NA
1301/5/3324:3325,1/5/3381:3383NA
1311/5/3328:3330,1/5/3373:3378NA
1321/5/3332:3337,1/5/3367:3371NA
1331/5/3340:3342,1/5/3363:3364NA
1341/5/3342:3345,1/5/3360:3363NA
1351/5/3349:3350,1/5/3353:3356NA
1361/7/15:16,1/7/63:65NA
1371/7/21:27,1/7/53:58NA
1381/7/28:29,1/7/49:52NA
1391/7/29:30,1/7/47:49NA
1401/7/32:36,1/7/41:45NA
1411/7/72:80,1/7/100:106NA
1421/7/84:87,1/7/94:96NA
1431/8/44:64,1/8/96:100NA
1441/8/64:66,1/8/93:96NA
1451/8/68:69,1/8/89:91NA

Problematic loops

#loop idProblemSequence
1CUU,AAG
2436, 437, 438, 439, 440, 441, 442, 443, 491, 492, 493, 494, 495, 618, 619, 620, 621, 622, 623
31218, 1219, 1220, 1221, 1222, 1223, 1224, 1225, 1226, 1283, 1284, 1285, 1286, 1287
41234, 1235, 1236, 1237, 1238, 1250, 1251, 1252, 1253, 1254
51262, 1263, 1264, 1265, 1266, 1275, 1276, 1277
6GGC,GCC
7CCC,GGG

Valid loops

#loop idlocationmotif
11/5/38:45NA
21/5/69:74NA
31/5/90:96NA
41/5/132:136NA
51/5/194:201NA
61/5/208:212NA
71/5/216:224NA
81/5/278:287NA
91/5/303:312NA
101/5/357:362NA
111/5/382:387NA
121/5/543:548NA
131/5/599:604NA
141/5/640:649NA
151/5/686:694NA
161/5/707:712NA
171/5/732:737NA
181/5/763:768NA
191/5/844:849NA
201/5/876:885NA
211/5/910:918NA
221/5/958:963NA
231/5/1076:1083NA
241/5/1126:1132NA
251/5/1148:1155NA
261/5/1403:1408NA
271/5/1462:1470NA
281/5/1506:1512NA
291/5/1544:1549NA
301/5/1599:1608NA
311/5/1634:1639NA
321/5/1680:1688NA
331/5/1719:1725NA
341/5/1792:1796NA
351/5/1844:1851NA
361/5/1862:1868NA
371/5/1923:1928NA
381/5/2110:2114NA
391/5/2135:2145NA
401/5/2164:2170NA
411/5/2220:2225NA
421/5/2253:2263NA
431/5/2292:2300NA
441/5/2369:2378NA
451/5/2534:2545NA
461/5/2568:2573NA
471/5/2616:2624NA
481/5/2633:2645NA
491/5/2673:2681NA
501/5/2693:2700NA
511/5/2724:2732NA
521/5/2744:2749NA
531/5/2776:2784NA
541/5/2840:2848NA
551/5/2897:2904NA
561/5/2920:2926NA
571/5/2963:2968NA
581/5/3025:3030NA
591/5/3068:3073NA
601/5/3110:3124NA
611/5/3194:3197NA
621/5/3240:3247NA
631/5/3303:3311NA
641/5/3350:3353NA
651/7/36:41NA
661/7/88:93NA
671/8/69:89NA
681/8/108:114NA
691/8/124:129NA

Problematic loops

#loop idProblemSequence
11023, 1024, 1025, 1026, 1027, 1028, 1029
21239, 1240, 1241, 1242, 1243, 1244, 1245, 1246, 1247, 1248, 1249
31267, 1268, 1269, 1270, 1271, 1272, 1273, 1274
41347, 1348, 1349, 1350, 1351, 1352, 1353, 1354, 1355, 1356, 1357
51562, 1563, 1564, 1565, 1566, 1567, 1568, 1569, 1570, 1571, 1572, 1573, 1574, 1575, 1576, 1577
61760, 1761, 1762, 1763, 1764, 1765
71951, 1952, 1953, 2093, 2094, 2095
82435, 2436, 2437, 2438, 2439, 2440, 2441, 2442, 2443, 2444, 2503, 2504, 2505, 2506, 2507, 2508, 2509, 2510, 2511, 2512

Valid loops

#loop idlocationmotif
11/5/113:123,1/5/149:158,1/5/263:267NA
21/5/814:820,1/5/905:907,1/5/923:926NA
31/5/829:831,1/5/863:867,1/5/892:895NA
41/5/1479:1485,1/5/1857:1859,1/5/1871:1874NA
51/5/1488:1491,1/5/1837:1843,1/5/1852:1854NA
61/5/2432:2435,1/5/2512:2517,1/5/2590:2597NA
71/5/2529:2532,1/5/2547:2563,1/5/2578:2581NA
81/5/2664:2666,1/5/2690:2692,1/5/2701:2706NA
91/5/2886:2889,1/5/2914:2916,1/5/2930:2936NA
101/5/3298:3300,1/5/3314:3318,1/5/3388:3390NA

Problematic loops

#loop idProblemSequence
11230, 1231, 1232, 1256, 1257, 1258, 1259, 1260, 1261, 1262, 1277, 1278, 1279

Coloring options: