RNA 3D Hub //

9OGY Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9OGY_0051/2/288:295No text annotation
HL_9OGY_0061/2/377:387No text annotation
HL_9OGY_0071/2/416:421No text annotation
HL_9OGY_0091/2/462:467No text annotation
HL_9OGY_0171/2/994:999No text annotation
HL_9OGY_0201/2/1141:1146No text annotation

Problematic loops

#loop idProblemSequence
HL_9OGY_001No text annotation
HL_9OGY_002No text annotation
HL_9OGY_003No text annotation
HL_9OGY_004No text annotation
HL_9OGY_008No text annotation
HL_9OGY_010No text annotation
HL_9OGY_011No text annotation
HL_9OGY_012No text annotation
HL_9OGY_013No text annotation
HL_9OGY_014No text annotation
HL_9OGY_015No text annotation
HL_9OGY_016No text annotation
HL_9OGY_018No text annotation
HL_9OGY_019No text annotation
HL_9OGY_021No text annotation
HL_9OGY_022No text annotation
HL_9OGY_023No text annotation
HL_9OGY_024No text annotation
HL_9OGY_025No text annotation
HL_9OGY_026No text annotation
HL_9OGY_027No text annotation
HL_9OGY_028No text annotation
HL_9OGY_029No text annotation
HL_9OGY_030No text annotation
HL_9OGY_031No text annotation
HL_9OGY_032No text annotation
HL_9OGY_033No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9OGY_0051/2/57:62,
1/2/86:88		No text annotation
IL_9OGY_0101/2/116:121,
1/2/343:347		No text annotation
IL_9OGY_0171/2/359:364,
1/2/396:403		No text annotation
IL_9OGY_0181/2/366:371,
1/2/393:394		No text annotation
IL_9OGY_0191/2/411:413,
1/2/424:429		No text annotation
IL_9OGY_0311/2/663:665,
1/2/1162:1164		No text annotation
IL_9OGY_0321/2/665:671,
1/2/1161:1162		No text annotation
IL_9OGY_0331/2/673:675,
1/2/1030:1032		No text annotation
IL_9OGY_0341/2/676:680,
1/2/1025:1029		No text annotation
IL_9OGY_0361/2/802:804,
1/2/859:863		No text annotation
IL_9OGY_0371/2/805:807,
1/2/856:858		No text annotation
IL_9OGY_0381/2/807:815,
1/2/849:856		No text annotation
IL_9OGY_0421/2/922:923,
1/2/1019:1022		No text annotation
IL_9OGY_0431/2/925:927,
1/2/1014:1017		No text annotation
IL_9OGY_0441/2/928:931,
1/2/1010:1013		No text annotation
IL_9OGY_0451/2/931:935,
1/2/1007:1010		No text annotation
IL_9OGY_0461/2/942:945,
1/2/981:984		No text annotation
IL_9OGY_0471/2/952:956,
1/2/967:974		No text annotation
IL_9OGY_0481/2/1041:1047,
1/2/1071:1074		No text annotation
IL_9OGY_0501/2/1091:1093,
1/2/1152:1158		No text annotation
IL_9OGY_0511/2/1098:1103,
1/2/1129:1134		No text annotation
IL_9OGY_0521/2/1108:1110,
1/2/1123:1124		No text annotation
IL_9OGY_0531/2/1168:1176,
1/2/1185:1191		No text annotation

Problematic loops

#loop idProblemSequence
IL_9OGY_001No text annotation
IL_9OGY_002No text annotation
IL_9OGY_003No text annotation
IL_9OGY_004No text annotation
IL_9OGY_006No text annotation
IL_9OGY_007No text annotation
IL_9OGY_008No text annotation
IL_9OGY_009No text annotation
IL_9OGY_011No text annotation
IL_9OGY_012No text annotation
IL_9OGY_013No text annotation
IL_9OGY_014No text annotation
IL_9OGY_015No text annotation
IL_9OGY_016No text annotation
IL_9OGY_020No text annotation
IL_9OGY_021No text annotation
IL_9OGY_022No text annotation
IL_9OGY_023No text annotation
IL_9OGY_024No text annotation
IL_9OGY_025No text annotation
IL_9OGY_026No text annotation
IL_9OGY_027No text annotation
IL_9OGY_028No text annotation
IL_9OGY_029No text annotation
IL_9OGY_030No text annotation
IL_9OGY_035No text annotation
IL_9OGY_039No text annotation
IL_9OGY_040No text annotation
IL_9OGY_041No text annotation
IL_9OGY_049No text annotation
IL_9OGY_054No text annotation
IL_9OGY_055No text annotation
IL_9OGY_056No text annotation
IL_9OGY_057No text annotation
IL_9OGY_058No text annotation
IL_9OGY_059No text annotation
IL_9OGY_060No text annotation
IL_9OGY_061No text annotation
IL_9OGY_062No text annotation
IL_9OGY_063No text annotation
IL_9OGY_064No text annotation
IL_9OGY_065No text annotation
IL_9OGY_066No text annotation
IL_9OGY_067No text annotation
IL_9OGY_068No text annotation
IL_9OGY_069No text annotation
IL_9OGY_070No text annotation
IL_9OGY_071No text annotation
IL_9OGY_072No text annotation
IL_9OGY_073No text annotation
IL_9OGY_074No text annotation
IL_9OGY_075No text annotation
IL_9OGY_076No text annotation
IL_9OGY_077No text annotation
IL_9OGY_078No text annotation
IL_9OGY_079No text annotation
IL_9OGY_080No text annotation
IL_9OGY_081No text annotation
IL_9OGY_082No text annotation
IL_9OGY_083No text annotation
IL_9OGY_084No text annotation
IL_9OGY_085No text annotation
IL_9OGY_086Stack and bulge

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9OGY_0021/2/816:819,
1/2/829:831,
1/2/843:848		No text annotation
J3_9OGY_0031/2/938:941,
1/2/985:993,
1/2/1000:1004		No text annotation
J3_9OGY_0041/2/1094:1096,
1/2/1136:1140,
1/2/1147:1151		No text annotation
J4_9OGY_0011/2/98:106,
1/2/355:357,
1/2/405:409,
1/2/431:432		No text annotation
J4_9OGY_0021/2/671:673,
1/2/1032:1037,
1/2/1078:1089,
1/2/1160:1161		No text annotation
J5_9OGY_0041/2/123:129,
1/2/183:185,
1/2/214:219,
1/2/302:312,
1/2/337:341		No text annotation

Problematic loops

#loop idProblemSequence
J3_9OGY_001No text annotation
J3_9OGY_005No text annotation
J3_9OGY_006No text annotation
J3_9OGY_007No text annotation
J3_9OGY_008No text annotation
J3_9OGY_009No text annotation
J3_9OGY_010No text annotation
J3_9OGY_011No text annotation
J3_9OGY_012No text annotation
J4_9OGY_003No text annotation
J5_9OGY_001No text annotation
J5_9OGY_002No text annotation
J5_9OGY_003No text annotation

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