4K0K Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/13:23 | NA | NA | ||
| 1/A/78:86 | NA | NA | ||
| 1/A/153:158 | NA | NA | ||
| 1/A/187:192 | NA | NA | ||
| 1/A/208:212 | NA | NA | ||
| 1/A/255:263 | NA | NA | ||
| 1/A/292:297 | NA | NA | ||
| 1/A/316:329 | NA | NA | ||
| 1/A/338:343 | NA | NA | ||
| 1/A/375:380 | NA | NA | ||
| 1/A/415:420 | NA | NA | ||
| 1/A/453:459 | NA | NA | ||
| 1/A/506:511 | NA | NA | ||
| 1/A/601:607 | NA | NA | ||
| 1/A/673:682 | NA | NA | ||
| 1/A/710:715 | NA | NA | ||
| 1/A/770:780 | NA | NA | ||
| 1/A/821:827 | NA | NA | ||
| 1/A/840:845 | NA | NA | ||
| 1/A/875:880 | NA | NA | ||
| 1/A/941:950 | NA | NA | ||
| 1/A/991:996 | NA | NA | ||
| 1/A/1059:1064 | NA | NA | ||
| 1/A/1072:1079 | NA | NA | ||
| 1/A/1111:1126 | NA | NA | ||
| 1/A/1148:1153 | NA | NA | ||
| 1/A/1247:1252 | NA | NA | ||
| 1/A/1296:1305 | NA | NA | ||
| 1/A/1338:1349 | NA | NA | ||
| 1/A/1430:1435 | NA | NA | ||
| 1/A/1493:1498 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/31:33, 1/A/536:537 | NA | NA | ||
| 1/A/45:46, 1/A/392:394 | NA | NA | ||
| 1/A/48:53, 1/A/355:357 | NA | NA | ||
| 1/A/55:57, 1/A/352:353 | NA | NA | ||
| 1/A/64:67, 1/A/97:98 | NA | NA | ||
| 1/A/68:70, 1/A/94:96 | NA | NA | ||
| 1/A/76:78, 1/A/86:88 | NA | NA | ||
| 1/A/123:126, 1/A/227:228 | NA | NA | ||
| 1/A/127:131, 1/A/223:226 | NA | NA | ||
| 1/A/143:148, 1/A/163:169 | NA | NA | ||
| 1/A/181:183, 1/A/196:198 | NA | NA | ||
| 1/A/238:243, 1/A/273:280 | NA | NA | ||
| 1/A/245:248, 1/A/270:271 | NA | NA | ||
| 1/A/288:289, 1/A/300:304 | NA | NA | ||
| 1/A/363:365, 1/A/388:389 | NA | NA | ||
| 1/A/367:371, 1/A/385:386 | NA | NA | ||
| 1/A/371:372, 1/A/383:385 | NA | NA | ||
| 1/A/405:412, 1/A/423:429 | NA | NA | ||
| 1/A/441:445, 1/A/468:473 | NA | NA | ||
| 1/A/445:450, 1/A/462:468 | NA | NA | ||
| 1/A/488:495, 1/A/524:525 | NA | NA | ||
| 1/A/499:505, 1/A/512:520 | NA | NA | ||
| 1/A/553:559, 1/A/858:859 | NA | NA | ||
| 1/A/564:568, 1/A/741:745 | NA | NA | ||
| 1/A/578:580, 1/A/628:629 | NA | NA | ||
| 1/A/581:582, 1/A/624:627 | NA | NA | ||
| 1/A/589:596, 1/A/612:617 | NA | NA | ||
| 1/A/638:639, 1/A/735:738 | NA | NA | ||
| 1/A/641:642, 1/A/731:733 | NA | NA | ||
| 1/A/646:650, 1/A/724:727 | NA | NA | ||
| 1/A/657:662, 1/A/696:701 | NA | NA | ||
| 1/A/667:672, 1/A/683:691 | NA | NA | ||
| 1/A/758:762, 1/A/788:789 | NA | NA | ||
| 1/A/763:767, 1/A/783:787 | NA | NA | ||
| 1/A/865:872, 1/A/883:888 | NA | NA | ||
| 1/A/900:901, 1/A/1376:1378 | NA | NA | ||
| 1/A/903:905, 1/A/1373:1374 | NA | NA | ||
| 1/A/911:913, 1/A/1363:1367 | NA | NA | ||
| 1/A/931:932, 1/A/1208:1210 | NA | NA | ||
| 1/A/971:975, 1/A/1027:1028 | NA | NA | ||
| 1/A/978:985, 1/A/1002:1024 | NA | NA | ||
| 1/A/989:991, 1/A/996:998 | NA | NA | ||
| 1/A/1031:1033, 1/A/1190:1191 | NA | NA | ||
| 1/A/1035:1039, 1/A/1186:1188 | NA | NA | ||
| 1/A/1040:1041, 1/A/1181:1185 | NA | NA | ||
| 1/A/1043:1044, 1/A/1177:1179 | NA | NA | ||
| 1/A/1044:1046, 1/A/1175:1177 | NA | NA | ||
| 1/A/1106:1111, 1/A/1126:1133 | NA | NA | ||
| 1/A/1141:1144, 1/A/1157:1163 | NA | NA | ||
| 1/A/1229:1235, 1/A/1266:1272 | NA | NA | ||
| 1/A/1237:1240, 1/A/1259:1264 | NA | NA | ||
| 1/A/1241:1242, 1/A/1256:1258 | NA | NA | ||
| 1/A/1242:1244, 1/A/1255:1256 | NA | NA | ||
| 1/A/1285:1290, 1/A/1311:1316 | NA | NA | ||
| 1/A/1382:1384, 1/A/1479:1482 | NA | NA | ||
| 1/A/1384:1387, 1/A/1475:1479 | NA | NA | ||
| 1/A/1388:1390, 1/A/1472:1474 | NA | NA | ||
| 1/A/1390:1392, 1/A/1469:1472 | NA | NA | ||
| 1/A/1395:1397, 1/A/1464:1466 | NA | NA | ||
| 1/A/1399:1402, 1/A/1459:1462 | NA | NA | ||
| 1/A/1414:1418, 1/A/1444:1447 | NA | NA | ||
| 1/A/1418:1420, 1/A/1442:1444 | NA | NA | ||
| 1/A/1423:1428, 1/A/1437:1439 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/810:813, 1/A/835:839, 1/A/846:852 | NA | NA | ||
| 1/A/914:917, 1/A/1326:1332, 1/A/1355:1362 | NA | NA | ||
| 1/A/921:924, 1/A/1217:1219, 1/A/1319:1322 | NA | NA | ||
| 1/A/933:940, 1/A/951:962, 1/A/1203:1207 | NA | NA | ||
| 1/A/968:971, 1/A/1028:1030, 1/A/1192:1197 | NA | NA | ||
| 1/A/1046:1051, 1/A/1090:1096, 1/A/1169:1175 | NA | NA | ||
| 1/A/1099:1101, 1/A/1138:1141, 1/A/1163:1166 | NA | NA | ||
| 1/A/1219:1223, 1/A/1278:1285, 1/A/1316:1319 | NA | NA |
Problematic loops
No problematic loops
Coloring options: