#Varna 2DMotifNum NtsInstances
1
  • HL_43074.2
HL_43074.2
  • Basepair signature: cWW-tSH-R-R
  • History status: Updated, 1 parent
  • GNRA (208)
  • Other HL (39)
  • GNRA with GA tSW pair (3)
  • 6253
    2
    • HL_33239.6
    HL_33239.6
    • Basepair signature: cWW-R-R-tWH-R-R-R
    • History status: Updated, 1 parent
  • T-loop with 2 stacked bulged bases (88)
  • T-loop with 2 bulged bases not stacked (8)
  • Other HL (2)
  • 998
    3
    • HL_79299.4
    HL_79299.4
    • Basepair signature: cWW-tSW-R
    • History status: Exact match
  • UNCG (37)
  • Other HL (6)
  • 546
    4
    • HL_59710.3
    HL_59710.3
    • Basepair signature: cWW-bif-R-R-R-R-R
    • History status: Exact match
  • tRNA anticodon loop (21)
  • Guanidine riboswitch aptamer P2 hairpin (1)
  • Turnip yellow mosaic virus TLS RNA anticodon loop (1)
  • Lariat-capping (LC) ribozyme DP2.1 hairpin (1)
  • 928
    5
    • HL_60381.1
    HL_60381.1
    • Basepair signature: cWW-tSH-R-R-R-R
    • History status: Exact match
    821
    6
    • HL_46142.3
    HL_46142.3
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    819
    7
    • HL_32512.2
    HL_32512.2
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    716
    8
    • HL_86880.2
    HL_86880.2
    • Basepair signature: cWW-R-R
    • History status: Exact match
    516
    9
    • HL_69353.3
    HL_69353.3
    • Basepair signature: cWW
    • History status: Exact match
    315
    10
    • HL_02361.2
    HL_02361.2
    • Basepair signature: cWW-tSH-R-R
    • History status: Exact match
  • GNRA with one bulged base (12)
  • Other HL (2)
  • 614
    11
    • HL_08002.4
    HL_08002.4
    • Basepair signature: cWW-R-R-tWH
    • History status: Exact match
    614
    12
    • HL_26055.3
    HL_26055.3
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    714
    13
    • HL_35978.3
    HL_35978.3
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    1113
    14
    • HL_79272.1
    HL_79272.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    511
    15
    • HL_68493.3
    HL_68493.3
    • Basepair signature: cWW-tWH-R-R-R
    • History status: Exact match
  • T-loop with 1 bulged base (9)
  • Other HL (2)
  • 711
    16
    • HL_73266.2
    HL_73266.2
    • Basepair signature: cWW-R-cSW-R-cSH
    • History status: Updated, 1 parent
    910
    17
    • HL_36982.2
    HL_36982.2
    • Basepair signature: cWW
    • History status: Exact match
    39
    18
    • HL_01008.3
    HL_01008.3
    • Basepair signature: cWW-R
    • History status: Exact match
    49
    19
    • HL_32617.1
    HL_32617.1
    • Basepair signature: cWW-cSH
    • History status: Exact match
  • tRNA Sec D-loop (8)
  • CRISPR-Cas9 crRNA hairpin 4 (1)
  • 59
    20
    • HL_04171.2
    HL_04171.2
    • Basepair signature: cWW-cWW-R-cSS-cSS-R
    • History status: Exact match
    109
    21
    • HL_87219.3
    HL_87219.3
    • Basepair signature: cWW-R-tSH-R-R-R-R
    • History status: Exact match
    109
    22
    • HL_61092.1
    HL_61092.1
    • Basepair signature: cWW-cWS-R-R-R
    • History status: Exact match
    78
    23
    • HL_54035.3
    HL_54035.3
    • Basepair signature: cWW-cWW-R-R-R
    • History status: Exact match
    88
    24
    • HL_81508.1
    HL_81508.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    78
    25
    • HL_14612.3
    HL_14612.3
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    88
    26
    • HL_98995.3
    HL_98995.3
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
  • Ribsomal LSU H95 (4)
  • 68
    27
    • HL_92681.3
    HL_92681.3
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    77
    28
    • HL_02733.3
    HL_02733.3
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    67
    29
    • HL_23481.3
    HL_23481.3
    • Basepair signature: cWW-tSH-R-R-R
    • History status: Exact match
    77
    30
    • HL_57052.2
    HL_57052.2
    • Basepair signature: cWW
    • History status: Exact match
    37
    31
    • HL_67216.3
    HL_67216.3
    • Basepair signature: cWW-tSH-R-R-R
    • History status: Exact match
    77
    32
    • HL_98557.3
    HL_98557.3
    • Basepair signature: cWW
    • History status: Exact match
    37
    33
    • HL_67265.3
    HL_67265.3
    • Basepair signature: cWW-R-tHW-R-R-R-R-R
    • History status: Exact match
    107
    34
    • HL_35894.2
    HL_35894.2
    • Basepair signature: cWW-cSW-R-R
    • History status: Exact match
    67
    35
    • HL_10751.2
    HL_10751.2
    • Basepair signature: cWW-cWS-R-R-R-R
    • History status: Exact match
    87
    36
    • HL_31286.2
    HL_31286.2
    • Basepair signature: cWW-tWH-R-R-R-R-R
    • History status: Exact match
    96
    37
    • HL_56677.3
    HL_56677.3
    • Basepair signature: cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW
    • History status: Exact match
    136
    38
    • HL_19870.3
    HL_19870.3
    • Basepair signature: cWW-tSH-tHH-tWW-R-R-R
    • History status: Exact match
    116
    39
    • HL_20743.1
    HL_20743.1
    • Basepair signature: cWW-R-cSS-R-R
    • History status: Exact match
    86
    40
    • HL_68304.4
    HL_68304.4
    • Basepair signature: cWW-tSH-R-R
    • History status: Exact match
    66
    41
    • HL_17926.3
    HL_17926.3
    • Basepair signature: cWW-R-R-R-R-R-R
    • History status: Exact match
    96
    42
    • HL_78457.3
    HL_78457.3
    • Basepair signature: cWW-tWH-R-tSH-R
    • History status: Exact match
    86
    43
    • HL_72451.3
    HL_72451.3
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    86
    44
    • HL_82678.2
    HL_82678.2
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    56
    45
    • HL_05018.3
    HL_05018.3
    • Basepair signature: cWW-cSW-R-R-R-R
    • History status: Exact match
    86
    46
    • HL_15942.3
    HL_15942.3
    • Basepair signature: cWW-R
    • History status: Exact match
    46
    47
    • HL_36421.3
    HL_36421.3
    • Basepair signature: cWW-tSH-R-R-R-R-R
    • History status: Exact match
    96
    48
    • HL_63699.1
    HL_63699.1
    • Basepair signature: cWW-R-tSW-R
    • History status: Exact match
    65
    49
    • HL_92304.2
    HL_92304.2
    • Basepair signature: cWW-cSW-R-R-tSH-R-R
    • History status: Exact match
    105
    50
    • HL_99402.2
    HL_99402.2
    • Basepair signature: cWW-R-R-cSH-cSH-R-R
    • History status: Exact match
    105
    51
    • HL_66171.1
    HL_66171.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    55
    52
    • HL_16839.1
    HL_16839.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    75
    53
    • HL_19337.2
    HL_19337.2
    • Basepair signature: cWW-R
    • History status: Exact match
    45
    54
    • HL_19958.1
    HL_19958.1
    • Basepair signature: cWW-cWW-cWS-R-R
    • History status: Exact match
    85
    55
    • HL_39334.3
    HL_39334.3
    • Basepair signature: cWW-tSW-R-R
    • History status: Exact match
    75
    56
    • HL_90642.3
    HL_90642.3
    • Basepair signature: cWW-R-R-tWH-R
    • History status: Exact match
    75
    57
    • HL_39778.2
    HL_39778.2
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    65
    58
    • HL_43613.3
    HL_43613.3
    • Basepair signature: cWW-tWH-tWH-R
    • History status: Exact match
    75
    59
    • HL_18368.4
    HL_18368.4
    • Basepair signature: cWW-R
    • History status: Exact match
    44
    60
    • HL_41778.1
    HL_41778.1
    • Basepair signature: cWW-cWS-tSW
    • History status: Exact match
    64
    61
    • HL_89082.1
    HL_89082.1
    • Basepair signature: cWW-cWW-R-R-R-R-R-R
    • History status: Exact match
    114
    62
    • HL_42733.1
    HL_42733.1
    • Basepair signature: cWW-cWW-tSH-R-R
    • History status: Exact match
    84
    63
    • HL_69774.2
    HL_69774.2
    • Basepair signature: cWW-tSW-R
    • History status: Exact match
    54
    64
    • HL_94651.1
    HL_94651.1
    • Basepair signature: cWW-tSS-R-R-R
    • History status: Exact match
    74
    65
    • HL_81439.4
    HL_81439.4
    • Basepair signature: cWW-tSH-R
    • History status: Exact match
    54
    66
    • HL_94757.1
    HL_94757.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    54
    67
    • HL_29487.1
    HL_29487.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    64
    68
    • HL_50622.3
    HL_50622.3
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    114
    69
    • HL_48376.1
    HL_48376.1
    • Basepair signature: cWW-tSH-R-R-R-R-R
    • History status: Exact match
    94
    70
    • HL_86769.2
    HL_86769.2
    • Basepair signature: cWW-cSS-cSH
    • History status: Updated, 1 parent
    74
    71
    • HL_54654.1
    HL_54654.1
    • Basepair signature: cWW-R
    • History status: Exact match
    44
    72
    • HL_62869.1
    HL_62869.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    54
    73
    • HL_68529.1
    HL_68529.1
    • Basepair signature: cWW
    • History status: Exact match
    34
    74
    • HL_05123.1
    HL_05123.1
    • Basepair signature: cWW-cWW-R-R-R-R
    • History status: Exact match
    94
    75
    • HL_49196.2
    HL_49196.2
    • Basepair signature: cWW-cWW-R
    • History status: Exact match
    64
    76
    • HL_94352.2
    HL_94352.2
    • Basepair signature: cWW-R-R
    • History status: Exact match
    53
    77
    • HL_80105.3
    HL_80105.3
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    73
    78
    • HL_19162.2
    HL_19162.2
    • Basepair signature: cWW-tSH-R-R-R-R-R-R-R-R
    • History status: Exact match
    123
    79
    • HL_49873.1
    HL_49873.1
    • Basepair signature: cWW-tSH-cWS-cWS-R
    • History status: Exact match
  • tRNA Leu D-loop (3)
  • 83
    80
    • HL_75091.1
    HL_75091.1
    • Basepair signature: cWW-R-R-R-cSH-R
    • History status: Exact match
    93
    81
    • HL_16845.4
    HL_16845.4
    • Basepair signature: cWW-R-R
    • History status: Exact match
    53
    82
    • HL_32458.1
    HL_32458.1
    • Basepair signature: cWW-R-tWH-R-R-R
    • History status: Exact match
    93
    83
    • HL_81327.1
    HL_81327.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    53
    84
    • HL_93212.3
    HL_93212.3
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    83
    85
    • HL_23537.2
    HL_23537.2
    • Basepair signature: cWW-R-R-tWH-R-R-R-R
    • History status: Exact match
    103
    86
    • HL_17086.2
    HL_17086.2
    • Basepair signature: cWW-cWW-R-tSH-R-tSH-R-R
    • History status: Exact match
    133
    87
    • HL_43355.1
    HL_43355.1
    • Basepair signature: cWW-tSH-R-R
    • History status: Exact match
    63
    88
    • HL_53987.1
    HL_53987.1
    • Basepair signature: cWW-cWS
    • History status: Exact match
    43
    89
    • HL_86109.1
    HL_86109.1
    • Basepair signature: cWW-tWH-R-R-R-R-R-R-R
    • History status: Exact match
    123
    90
    • HL_50537.2
    HL_50537.2
    • Basepair signature: cWW-bif-R-R-R-R
    • History status: Exact match
    83
    91
    • HL_43610.1
    HL_43610.1
    • Basepair signature: cWW-cWW-R-R
    • History status: Exact match
    73
    92
    • HL_01472.1
    HL_01472.1
    • Basepair signature: cWW-R-tSW-R
    • History status: Exact match
    63
    93
    • HL_33483.1
    HL_33483.1
    • Basepair signature: cWW-cWS-R
    • History status: Exact match
    53
    94
    • HL_58853.1
    HL_58853.1
    • Basepair signature: cWW-tSH-R-R-R-R
    • History status: Exact match
  • Varkud satellite (VS) ribozyme helix 1 (2)
  • 83
    95
    • HL_98885.3
    HL_98885.3
    • Basepair signature: cWW-R-R-R-R-R-R-R
    • History status: Exact match
    103
    96
    • HL_96776.2
    HL_96776.2
    • Basepair signature: cWW-R-cSW-R
    • History status: Exact match
    63
    97
    • HL_18218.1
    HL_18218.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    63
    98
    • HL_91503.1
    HL_91503.1
    • Basepair signature: cWW-R-R-R-R-R-R
    • History status: Exact match
    93
    99
    • HL_05607.1
    HL_05607.1
    • Basepair signature: cWW-cWH-R
    • History status: Exact match
    52
    100
    • HL_15968.1
    HL_15968.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    82
    101
    • HL_88982.1
    HL_88982.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    82
    102
    • HL_07432.1
    HL_07432.1
    • Basepair signature: cWW-R-R-cWS-cSH-R-R
    • History status: Exact match
    112
    103
    • HL_64887.1
    HL_64887.1
    • Basepair signature: cWW-cWS-R
    • History status: Exact match
    52
    104
    • HL_12571.1
    HL_12571.1
    • Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R
    • History status: Exact match
  • tRNA Leu D-loop (2)
  • 132
    105
    • HL_26772.1
    HL_26772.1
    • Basepair signature: cWW-tSH-R-R-R-R-R-R-R
    • History status: Exact match
    112
    106
    • HL_97126.1
    HL_97126.1
    • Basepair signature: cWW-R
    • History status: Exact match
    42
    107
    • HL_00186.1
    HL_00186.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    52
    108
    • HL_07579.1
    HL_07579.1
    • Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    142
    109
    • HL_31581.1
    HL_31581.1
    • Basepair signature: cWW-R-cSH-R-R-R-R-R-R
    • History status: Exact match
    122
    110
    • HL_80705.1
    HL_80705.1
    • Basepair signature: cWW-tWW-R-R-R
    • History status: Exact match
    72
    111
    • HL_12703.1
    HL_12703.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    52
    112
    • HL_27335.1
    HL_27335.1
    • Basepair signature: cWW-cWW-R
    • History status: Exact match
    62
    113
    • HL_67052.1
    HL_67052.1
    • Basepair signature: cWW-bif-R-R-R-R
    • History status: Exact match
    82
    114
    • HL_81205.1
    HL_81205.1
    • Basepair signature: cWW-cWW-R-R-tWH-R-tWH-R-R-R
    • History status: Exact match
    142
    115
    • HL_35442.1
    HL_35442.1
    • Basepair signature: cWW-tSW-R-R
    • History status: Exact match
    52
    116
    • HL_84050.1
    HL_84050.1
    • Basepair signature: cWW-R-cSH
    • History status: New id, 1 parent
    62
    117
    • HL_49992.1
    HL_49992.1
    • Basepair signature: cWW-cWW-tWH-tWH-R-R
    • History status: Exact match
    102
    118
    • HL_35491.1
    HL_35491.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    72
    119
    • HL_69941.1
    HL_69941.1
    • Basepair signature: cWW-R
    • History status: Exact match
    42
    120
    • HL_94657.1
    HL_94657.1
    • Basepair signature: cWW-tHH-R-R-R
    • History status: Exact match
    72
    121
    • HL_06048.1
    HL_06048.1
    • Basepair signature: cWW-R-cSS-cSS-R
    • History status: Exact match
    92
    122
    • HL_38646.2
    HL_38646.2
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    72
    123
    • HL_50314.1
    HL_50314.1
    • Basepair signature: cWW
    • History status: Exact match
    32
    124
    • HL_60695.1
    HL_60695.1
    • Basepair signature: cWW-cWH-R
    • History status: Exact match
    52
    125
    • HL_76406.3
    HL_76406.3
    • Basepair signature: cWW-cWH-R-R-R-R
    • History status: Exact match
    92
    126
    • HL_08510.1
    HL_08510.1
    • Basepair signature: cWW-R-R-R-cSH
    • History status: Exact match
    82
    127
    • HL_24323.1
    HL_24323.1
    • Basepair signature: cWW-tWW-R-R-R-R-R-R
    • History status: Exact match
    102
    128
    • HL_06097.1
    HL_06097.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    112
    129
    • HL_17217.1
    HL_17217.1
    • Basepair signature: cWW-R-tSW
    • History status: Exact match
    52
    130
    • HL_78061.1
    HL_78061.1
    • Basepair signature: cWW-R-R-R-tWH-R-R-R
    • History status: Exact match
    102
    131
    • HL_01181.1
    HL_01181.1
    • Basepair signature: cWW-tWH-R-R-R
    • History status: Exact match
    72
    132
    • HL_24625.1
    HL_24625.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    52
    133
    • HL_47809.1
    HL_47809.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    52
    134
    • HL_86378.1
    HL_86378.1
    • Basepair signature: cWW-cSH-R-R
    • History status: Exact match
    72
    135
    • HL_61893.2
    HL_61893.2
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    62
    136
    • HL_54357.1
    HL_54357.1
    • Basepair signature: cWW-cWW-R-cSH-R
    • History status: Exact match
    82
    137
    • HL_93551.1
    HL_93551.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    82
    138
    • HL_40469.1
    HL_40469.1
    • Basepair signature: cWW-R
    • History status: Exact match
    42
    139
    • HL_61984.1
    HL_61984.1
    • Basepair signature: cWW
    • History status: Exact match
    32
    140
    • HL_91050.1
    HL_91050.1
    • Basepair signature: cWW-tSH-R-R-R
    • History status: Exact match
    72
    141
    • HL_98870.1
    HL_98870.1
    • Basepair signature: cWW-tSH-R-R-tWW-R-R-R-R
    • History status: Exact match
    122
    142
    • HL_20751.1
    HL_20751.1
    • Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R
    • History status: Exact match
    132
    143
    • HL_82303.1
    HL_82303.1
    • Basepair signature: cWW-cWW-R-R
    • History status: Exact match
    72
    144
    • HL_86843.1
    HL_86843.1
    • Basepair signature: cWW-tSH-R-R-R
    • History status: Exact match
    72
    145
    • HL_06483.1
    HL_06483.1
    • Basepair signature: cWW-tSH-cWS-cSH-R
    • History status: Exact match
    92
    146
    • HL_33507.2
    HL_33507.2
    • Basepair signature: cWW-R
    • History status: Exact match
    42
    147
    • HL_93650.1
    HL_93650.1
    • Basepair signature: cWW-tWH-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    152
    148
    • HL_25762.1
    HL_25762.1
    • Basepair signature: cWW-bif-R-R
    • History status: Exact match
    62
    149
    • HL_30596.1
    HL_30596.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    82
    150
    • HL_02255.1
    HL_02255.1
    • Basepair signature: cWW-cWS-R
    • History status: Exact match
    52
    151
    • HL_11805.1
    HL_11805.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    112
    152
    • HL_55200.2
    HL_55200.2
    • Basepair signature: cWW-tSH-R-R
    • History status: Exact match
    62
    153
    • HL_07268.1
    HL_07268.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    111
    154
    • HL_30819.1
    HL_30819.1
    • Basepair signature: cWW-cSH-tSS-R-R
    • History status: Exact match
    81
    155
    • HL_51284.1
    HL_51284.1
    • Basepair signature: cWW-R-R-R-R-R-R-R
    • History status: Exact match
    101
    156
    • HL_79564.1
    HL_79564.1
    • Basepair signature: cWW-tSH-cWH-cHW-R-cHW-cWH-cHW-cWH-tSH-cHW-R-cWH-cWH-cHW-cWH-cWH-tSH-R-R
    • History status: Exact match
    221
    157
    • HL_12053.1
    HL_12053.1
    • Basepair signature: cWW-tSH-R
    • History status: Exact match
    51
    158
    • HL_23090.1
    HL_23090.1
    • Basepair signature: cWW-tSH-R-R-R-R
    • History status: Exact match
    81
    159
    • HL_34135.1
    HL_34135.1
    • Basepair signature: cWW-cWW-tSH-R
    • History status: Exact match
    71
    160
    • HL_44911.1
    HL_44911.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    161
    • HL_56372.1
    HL_56372.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    162
    • HL_68863.1
    HL_68863.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    111
    163
    • HL_82866.1
    HL_82866.1
    • Basepair signature: cWW-cWW-tWW-R-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    171
    164
    • HL_26501.1
    HL_26501.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    81
    165
    • HL_36552.1
    HL_36552.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    166
    • HL_49213.1
    HL_49213.1
    • Basepair signature: cWW-tSH-tHW-R-R-R-R
    • History status: Exact match
    101
    167
    • HL_97049.1
    HL_97049.1
    • Basepair signature: cWW-cWS-cSH-R
    • History status: Exact match
    71
    168
    • HL_18785.1
    HL_18785.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    169
    • HL_42211.1
    HL_42211.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    131
    170
    • HL_52657.1
    HL_52657.1
    • Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R
    • History status: Exact match
    151
    171
    • HL_92488.1
    HL_92488.1
    • Basepair signature: cWW-cWW-R-cSS-cSS-R-R-R-R
    • History status: Exact match
    141
    172
    • HL_02483.1
    HL_02483.1
    • Basepair signature: cWW-R-tWH-R-R-R-cSH
    • History status: Exact match
    101
    173
    • HL_23219.1
    HL_23219.1
    • Basepair signature: cWW-tSW-cWH-R-cSH
    • History status: Exact match
    61
    174
    • HL_34516.1
    HL_34516.1
    • Basepair signature: cWW-R-cSH-R
    • History status: Exact match
    61
    175
    • HL_45387.1
    HL_45387.1
    • Basepair signature: cWW-R-tSW
    • History status: Exact match
    51
    176
    • HL_56500.1
    HL_56500.1
    • Basepair signature: cWW-cWW-cSH-R-R
    • History status: Exact match
    91
    177
    • HL_83225.1
    HL_83225.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    178
    • HL_94363.1
    HL_94363.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    179
    • HL_05667.1
    HL_05667.1
    • Basepair signature: cWW
    • History status: Exact match
    31
    180
    • HL_16827.1
    HL_16827.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    181
    • HL_49816.1
    HL_49816.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    182
    • HL_59988.1
    HL_59988.1
    • Basepair signature: cWW-tSH-tSH-R-R
    • History status: Exact match
    81
    183
    • HL_74088.1
    HL_74088.1
    • Basepair signature: cWW-tSW-R-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-cWH-cWH-R
    • History status: Exact match
    181
    184
    • HL_42671.1
    HL_42671.1
    • Basepair signature: cWW-R-R-tSS-R-R-R-R
    • History status: Exact match
    111
    185
    • HL_53119.1
    HL_53119.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    81
    186
    • HL_35010.1
    HL_35010.1
    • Basepair signature: cWW-tHH-cSH-R-R
    • History status: Exact match
    81
    187
    • HL_45493.1
    HL_45493.1
    • Basepair signature: cWW-tSW-R-R
    • History status: Exact match
    61
    188
    • HL_69459.1
    HL_69459.1
    • Basepair signature: cWW
    • History status: Exact match
    21
    189
    • HL_83704.1
    HL_83704.1
    • Basepair signature: cWW-R-R-cSS-R
    • History status: Exact match
    81
    190
    • HL_94607.1
    HL_94607.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    191
    • HL_05692.1
    HL_05692.1
    • Basepair signature: cWW
    • History status: Exact match
    31
    192
    • HL_37694.1
    HL_37694.1
    • Basepair signature: cWW-cWW-R-tSH-R-R
    • History status: Exact match
    91
    193
    • HL_60357.1
    HL_60357.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    194
    • HL_89184.1
    HL_89184.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    195
    • HL_97733.1
    HL_97733.1
    • Basepair signature: cWW-R-cSH-R-R
    • History status: Exact match
    81
    196
    • HL_00996.1
    HL_00996.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    51
    197
    • HL_32255.1
    HL_32255.1
    • Basepair signature: cWW-cWW-L-R-cSS-cWW
    • History status: Exact match
    101
    198
    • HL_53189.1
    HL_53189.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    199
    • HL_93146.1
    HL_93146.1
    • Basepair signature: cWW
    • History status: Exact match
    31
    200
    • HL_02811.1
    HL_02811.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    201
    • HL_12710.1
    HL_12710.1
    • Basepair signature: cWW-cSH-cWW-R-R-tSH-R-R-R-R-R
    • History status: Exact match
    151
    202
    • HL_23530.1
    HL_23530.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    203
    • HL_45684.1
    HL_45684.1
    • Basepair signature: cWW-L-cWW-R-R-R-R-R
    • History status: Exact match
    111
    204
    • HL_05832.1
    HL_05832.1
    • Basepair signature: cWW-cWW-tSW-R
    • History status: Exact match
    71
    205
    • HL_27757.1
    HL_27757.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    206
    • HL_37846.1
    HL_37846.1
    • Basepair signature: cWW-tWW-R-R-R
    • History status: Exact match
    71
    207
    • HL_76360.1
    HL_76360.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    208
    • HL_89785.1
    HL_89785.1
    • Basepair signature: cWW-tSH-cWH-cHW-R-cHW-cWH-cHW-cWH-tSH-cHW-R-R-cWH-cWH-cHW-cWH-cWH-tSH-R-R
    • History status: Exact match
    231
    209
    • HL_98248.1
    HL_98248.1
    • Basepair signature: cWW-cSH-tHW-R-R-R
    • History status: Exact match
    101
    210
    • HL_08291.1
    HL_08291.1
    • Basepair signature: cWW-R-tWH-R-R-R-R-R-R
    • History status: Exact match
    111
    211
    • HL_53849.1
    HL_53849.1
    • Basepair signature: cWW-cWW-R-cSW-R-cSH
    • History status: Exact match
    111
    212
    • HL_67205.1
    HL_67205.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    213
    • HL_02932.1
    HL_02932.1
    • Basepair signature: cWW-cSW-R-R-R-R-R-R-R
    • History status: Exact match
    111
    214
    • HL_12773.1
    HL_12773.1
    • Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    131
    215
    • HL_58200.1
    HL_58200.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    216
    • HL_85984.1
    HL_85984.1
    • Basepair signature: cWW-L-R-R-L-cWW-cWW-R-R-R
    • History status: Exact match
    141
    217
    • HL_28843.1
    HL_28843.1
    • Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R
    • History status: Exact match
    141
    218
    • HL_90197.1
    HL_90197.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    219
    • HL_98252.1
    HL_98252.1
    • Basepair signature: cWW-tWW-R-R-R-R
    • History status: Exact match
    81
    220
    • HL_01089.1
    HL_01089.1
    • Basepair signature: cWW-tSW-R-R-R-R
    • History status: Exact match
    81
    221
    • HL_93221.1
    HL_93221.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    131
    222
    • HL_03427.1
    HL_03427.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    223
    • HL_12870.1
    HL_12870.1
    • Basepair signature: cWW-R-R-R-R-tHW-R-R-R-R-R
    • History status: Exact match
    131
    224
    • HL_35550.1
    HL_35550.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    225
    • HL_46463.1
    HL_46463.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    226
    • HL_58446.1
    HL_58446.1
    • Basepair signature: cWW-R-R-R-R-R-tSW-R-R
    • History status: Exact match
    121
    227
    • HL_70505.1
    HL_70505.1
    • Basepair signature: cWW-cWW-tWW-R-R-R-R-R
    • History status: Exact match
    111
    228
    • HL_29392.1
    HL_29392.1
    • Basepair signature: cWW-tWH-R-R-R-R
    • History status: Exact match
    81
    229
    • HL_08602.1
    HL_08602.1
    • Basepair signature: cWW-cSS-R-R-R-cSS-R-R
    • History status: Exact match
    111
    230
    • HL_20714.1
    HL_20714.1
    • Basepair signature: cWW-cWW-tWH-R-R-R-R-R
    • History status: Exact match
    111
    231
    • HL_43533.1
    HL_43533.1
    • Basepair signature: cWW-bif-tSH-R-R-R
    • History status: Exact match
    91
    232
    • HL_93229.1
    HL_93229.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    51
    233
    • HL_03603.1
    HL_03603.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    151
    234
    • HL_14286.1
    HL_14286.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    235
    • HL_35888.1
    HL_35888.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    236
    • HL_58539.1
    HL_58539.1
    • Basepair signature: cWW-tHW-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    151
    237
    • HL_72066.1
    HL_72066.1
    • Basepair signature: cWW-R-tWH-R-R-R
    • History status: Exact match
    81
    238
    • HL_95237.1
    HL_95237.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    239
    • HL_06137.1
    HL_06137.1
    • Basepair signature: cWW-R-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-R-cWH-cWH
    • History status: Exact match
    161
    240
    • HL_17899.1
    HL_17899.1
    • Basepair signature: cWW-R-tSW-R-R
    • History status: Exact match
    81
    241
    • HL_78351.1
    HL_78351.1
    • Basepair signature: cWW-R-cSH
    • History status: Exact match
    61
    242
    • HL_90961.1
    HL_90961.1
    • Basepair signature: cWW-tSW
    • History status: Exact match
    41
    243
    • HL_98841.1
    HL_98841.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    111
    244
    • HL_01187.1
    HL_01187.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    245
    • HL_09712.1
    HL_09712.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    246
    • HL_81820.1
    HL_81820.1
    • Basepair signature: cWW-tSH-tHW-tHW-cSH-R
    • History status: Exact match
    111
    247
    • HL_03847.1
    HL_03847.1
    • Basepair signature: cWW-R-R-R-R-R-R-R
    • History status: Exact match
    101
    248
    • HL_25183.1
    HL_25183.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    249
    • HL_58733.1
    HL_58733.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    121
    250
    • HL_72419.1
    HL_72419.1
    • Basepair signature: cWW-tSH-tHH-R-R-R-R-R
    • History status: Exact match
    111
    251
    • HL_96277.1
    HL_96277.1
    • Basepair signature: cWW-cWW-tWH-R-R-R
    • History status: Exact match
    91
    252
    • HL_06228.1
    HL_06228.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    253
    • HL_30541.1
    HL_30541.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    254
    • HL_50959.1
    HL_50959.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    255
    • HL_10536.1
    HL_10536.1
    • Basepair signature: cWW-cWW-R-R-R-R-R
    • History status: Exact match
    101
    256
    • HL_68478.1
    HL_68478.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    257
    • HL_93573.1
    HL_93573.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    258
    • HL_14725.1
    HL_14725.1
    • Basepair signature: cWW-cWW-R-R-R-R
    • History status: Exact match
    91
    259
    • HL_25619.1
    HL_25619.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    111
    260
    • HL_48962.1
    HL_48962.1
    • Basepair signature: cWW-R-R-R-R-R-R-R
    • History status: Exact match
    101
    261
    • HL_96487.1
    HL_96487.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    262
    • HL_17956.1
    HL_17956.1
    • Basepair signature: cWW-tSH-tHS-R-R
    • History status: Exact match
    81
    263
    • HL_30585.1
    HL_30585.1
    • Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R
    • History status: Exact match
    161
    264
    • HL_41017.1
    HL_41017.1
    • Basepair signature: cWW-R
    • History status: Exact match
    41
    265
    • HL_50967.1
    HL_50967.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    266
    • HL_91131.1
    HL_91131.1
    • Basepair signature: cWW-cWW-R-R
    • History status: Exact match
    71
    267
    • HL_01925.1
    HL_01925.1
    • Basepair signature: cWW-tSH-cWH-cHW-cHW-cWH-cHW-cWH-tSH-cHW-cWH-cWH-cHW-cWH-cWH-R-R
    • History status: Exact match
    191
    268
    • HL_20891.1
    HL_20891.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R
    • History status: Exact match
    111
    269
    • HL_44221.1
    HL_44221.1
    • Basepair signature: cWW-cWW-R
    • History status: Exact match
    61
    270
    • HL_55046.1
    HL_55046.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    271
    • HL_14859.1
    HL_14859.1
    • Basepair signature: cWW-R-R-R
    • History status: Exact match
    61
    272
    • HL_36095.1
    HL_36095.1
    • Basepair signature: cWW-R-R-R-R-R-R
    • History status: Exact match
    91
    273
    • HL_49194.1
    HL_49194.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    274
    • HL_59445.1
    HL_59445.1
    • Basepair signature: cWW-R-R-R-R
    • History status: Exact match
    71
    275
    • HL_73051.1
    HL_73051.1
    • Basepair signature: cWW-cWW-cWH-cWH
    • History status: Exact match
    81
    276
    • HL_06645.1
    HL_06645.1
    • Basepair signature: cWW-cWW-R
    • History status: Exact match
    61
    277
    • HL_41285.1
    HL_41285.1
    • Basepair signature: cWW-R-R
    • History status: Exact match
    51
    278
    • HL_51090.1
    HL_51090.1
    • Basepair signature: cWW-cWS-R-R
    • History status: Exact match
  • tRNA Met D-loop (1)
  • 61
    279
    • HL_63693.1
    HL_63693.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    81
    280
    • HL_22443.1
    HL_22443.1
    • Basepair signature: cWW-R-tWH-R-tWH-R-R-R
    • History status: Exact match
    111
    281
    • HL_33612.1
    HL_33612.1
    • Basepair signature: cWW-cWH-R-R
    • History status: Exact match
    61
    282
    • HL_44769.1
    HL_44769.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    81
    283
    • HL_82782.1
    HL_82782.1
    • Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    181
    284
    • HL_94032.1
    HL_94032.1
    • Basepair signature: cWW-R-R-R-R-R-R-cSH
    • History status: Exact match
    101
    285
    • HL_59564.1
    HL_59564.1
    • Basepair signature: cWW-cSS-cSS-R-R-R-R-R-R-R-R-R-R-R-R-R
    • History status: Exact match
    201
    286
    • HL_73235.1
    HL_73235.1
    • Basepair signature: cWW-R-R-R-R-R
    • History status: Exact match
    81
    287
    • HL_96854.1
    HL_96854.1
    • Basepair signature: cWW-R-R-R-R-R-R
    • History status: Exact match
    91

    Coloring options:


    Exact match 282; Updated, 1 parent 4; New id, 1 parent 1;

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