Hairpin Loop Motif Atlas Release 3.12

#	Motif	Num Nts	Instances
1	HL_43074.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, > 2 parents GNRA (208) Other HL (39) GNRA with GA tSW pair (2)	6	252
2	HL_33239.5 View exemplar Basepair signature: cWW-R-R-tWH-R-R-R History status: Updated, 1 parent T-loop with 2 stacked bulged bases (87) T-loop with 2 bulged bases not stacked (8) Other HL (2)	9	97
3	HL_79299.4 View exemplar Basepair signature: cWW-tSW-R History status: Updated, 1 parent UNCG (37) Other HL (6)	5	46
4	HL_59710.3 View exemplar Basepair signature: cWW-bif-R-R-R-R-R History status: Updated, 1 parent tRNA anticodon loop (21) Guanidine riboswitch aptamer P2 hairpin (1) Turnip yellow mosaic virus TLS RNA anticodon loop (1) Lariat-capping (LC) ribozyme DP2.1 hairpin (1)	9	28
5	HL_60381.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: New id, > 2 parents	8	21
6	HL_46142.3 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Updated, 1 parent	8	19
7	HL_32512.2 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	16
8	HL_86880.2 View exemplar Basepair signature: cWW-R-R History status: Updated, 1 parent	5	16
9	HL_69353.3 View exemplar Basepair signature: cWW History status: Updated, 1 parent	3	15
10	HL_26055.3 View exemplar Basepair signature: cWW-R-R-R-R History status: Updated, 1 parent	7	14
11	HL_02361.2 View exemplar Basepair signature: cWW-tSH-R-R History status: Updated, 1 parent GNRA with one bulged base (12) Other HL (2)	6	14
12	HL_08002.4 View exemplar Basepair signature: cWW-R-R-tWH History status: Updated, 1 parent	6	14
13	HL_35978.3 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Updated, 1 parent	11	13
14	HL_79272.1 View exemplar Basepair signature: cWW-R-R History status: New id, 2 parents	5	11
15	HL_68493.3 View exemplar Basepair signature: cWW-tWH-R-R-R History status: Updated, 1 parent T-loop with 1 bulged base (9) Other HL (2)	7	11
16	HL_01008.3 View exemplar Basepair signature: cWW-R History status: Updated, 1 parent	4	9
17	HL_32617.1 View exemplar Basepair signature: cWW-cSH History status: Exact match tRNA Sec D-loop (8) CRISPR-Cas9 crRNA hairpin 4 (1)	5	9
18	HL_04171.2 View exemplar Basepair signature: cWW-cWW-R-cSS-cSS-R History status: Exact match	10	9
19	HL_87219.3 View exemplar Basepair signature: cWW-R-tSH-R-R-R-R History status: Updated, 1 parent	10	9
20	HL_36982.2 View exemplar Basepair signature: cWW History status: Exact match	3	9
21	HL_73266.1 View exemplar Basepair signature: cWW-R-cSW-R-cSH History status: Exact match	9	9
22	HL_54035.3 View exemplar Basepair signature: cWW-cWW-R-R-R History status: Updated, 1 parent	8	8
23	HL_61092.1 View exemplar Basepair signature: cWW-cWS-R-R-R History status: New id, 2 parents	7	8
24	HL_81508.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, 1 parent	7	8
25	HL_14612.3 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Updated, 1 parent	8	8
26	HL_98995.3 View exemplar Basepair signature: cWW-R-R-R History status: Updated, 1 parent Ribsomal LSU H95 (4)	6	8
27	HL_57052.2 View exemplar Basepair signature: cWW History status: Updated, 1 parent	3	7
28	HL_98557.3 View exemplar Basepair signature: cWW History status: Updated, 1 parent	3	7
29	HL_67216.3 View exemplar Basepair signature: cWW-tSH-R-R-R History status: Updated, 1 parent	7	7
30	HL_67265.3 View exemplar Basepair signature: cWW-R-tHW-R-R-R-R-R History status: Updated, 1 parent	10	7
31	HL_35894.2 View exemplar Basepair signature: cWW-cSW-R-R History status: Updated, 2 parents	6	7
32	HL_10751.2 View exemplar Basepair signature: cWW-cWS-R-R-R-R History status: Exact match	8	7
33	HL_92681.3 View exemplar Basepair signature: cWW-R-R-R-R History status: Updated, 1 parent	7	7
34	HL_02733.3 View exemplar Basepair signature: cWW-R-R-R History status: Updated, 1 parent	6	7
35	HL_23481.3 View exemplar Basepair signature: cWW-tSH-R-R-R History status: Updated, 1 parent	7	7
36	HL_56677.3 View exemplar Basepair signature: cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW History status: Updated, 1 parent	13	6
37	HL_19870.3 View exemplar Basepair signature: cWW-tSH-tHH-tWW-R-R-R History status: Updated, 1 parent	11	6
38	HL_20743.1 View exemplar Basepair signature: cWW-R-cSS-R-R History status: Exact match	8	6
39	HL_17926.3 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: Updated, 1 parent	9	6
40	HL_68304.4 View exemplar Basepair signature: cWW-tSH-R-R History status: Updated, 2 parents	6	6
41	HL_78457.3 View exemplar Basepair signature: cWW-tWH-R-tSH-R History status: Updated, 1 parent	8	6
42	HL_05018.3 View exemplar Basepair signature: cWW-cSW-R-R-R-R History status: Updated, 1 parent	8	6
43	HL_72451.3 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Updated, 1 parent	8	6
44	HL_82678.2 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	5	6
45	HL_15942.3 View exemplar Basepair signature: cWW-R History status: Updated, 1 parent	4	6
46	HL_36421.3 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: Updated, 1 parent	9	6
47	HL_31286.2 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R History status: Updated, 1 parent	9	6
48	HL_19958.1 View exemplar Basepair signature: cWW-cWW-cWS-R-R History status: Exact match	8	5
49	HL_39334.3 View exemplar Basepair signature: cWW-tSW-R-R History status: Updated, 1 parent	7	5
50	HL_90642.3 View exemplar Basepair signature: cWW-R-R-tWH-R History status: Updated, 1 parent	7	5
51	HL_39778.2 View exemplar Basepair signature: cWW-R-R-R History status: Updated, 1 parent	6	5
52	HL_43613.3 View exemplar Basepair signature: cWW-tWH-tWH-R History status: Updated, 1 parent	7	5
53	HL_92304.2 View exemplar Basepair signature: cWW-cSW-R-R-tSH-R-R History status: Exact match	10	5
54	HL_99402.2 View exemplar Basepair signature: cWW-R-R-cSH-cSH-R-R History status: Updated, 1 parent	10	5
55	HL_63699.1 View exemplar Basepair signature: cWW-R-tSW-R History status: Exact match	6	5
56	HL_16839.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, > 2 parents	7	5
57	HL_19337.2 View exemplar Basepair signature: cWW-R History status: Updated, 2 parents	4	5
58	HL_66171.1 View exemplar Basepair signature: cWW-R-R History status: New id, 1 parent	5	5
59	HL_94651.1 View exemplar Basepair signature: cWW-tSS-R-R-R History status: Exact match	7	4
60	HL_69774.2 View exemplar Basepair signature: cWW-tSW-R History status: Updated, 1 parent	5	4
61	HL_94757.1 View exemplar Basepair signature: cWW-R-R History status: New id, 2 parents	5	4
62	HL_81439.4 View exemplar Basepair signature: cWW-tSH-R History status: Updated, 2 parents	5	4
63	HL_29487.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	4
64	HL_50622.3 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Updated, 1 parent	11	4
65	HL_48376.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R History status: Exact match	9	4
66	HL_54654.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	4
67	HL_62869.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	4
68	HL_05123.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: Exact match	9	4
69	HL_49196.2 View exemplar Basepair signature: cWW-cWW-R History status: Updated, 1 parent	6	4
70	HL_18368.4 View exemplar Basepair signature: cWW-R History status: Updated, 2 parents	4	4
71	HL_41778.1 View exemplar Basepair signature: cWW-cWS-tSW History status: Exact match	6	4
72	HL_68529.1 View exemplar Basepair signature: cWW History status: Exact match	3	4
73	HL_89082.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R History status: Exact match	11	4
74	HL_42733.1 View exemplar Basepair signature: cWW-cWW-tSH-R-R History status: New id, > 2 parents	8	4
75	HL_16845.4 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	3
76	HL_75091.1 View exemplar Basepair signature: cWW-R-R-R-cSH-R History status: Exact match	9	3
77	HL_32458.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R History status: New id, 2 parents	9	3
78	HL_93212.3 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Updated, 1 parent	8	3
79	HL_23537.2 View exemplar Basepair signature: cWW-R-R-tWH-R-R-R-R History status: Updated, 1 parent	10	3
80	HL_17086.2 View exemplar Basepair signature: cWW-cWW-R-tSH-R-tSH-R-R History status: Exact match	13	3
81	HL_43355.1 View exemplar Basepair signature: cWW-tSH-R-R History status: New id, > 2 parents	6	3
82	HL_53987.1 View exemplar Basepair signature: cWW-cWS History status: New id, 2 parents	4	3
83	HL_81327.1 View exemplar Basepair signature: cWW-R-R History status: New id, 2 parents	5	3
84	HL_86109.1 View exemplar Basepair signature: cWW-F-tWH-F-F-F-F-F-F-F History status: Exact match	0	3
85	HL_50537.2 View exemplar Basepair signature: cWW-bif-R-R-R-R History status: Updated, 1 parent	8	3
86	HL_43610.1 View exemplar Basepair signature: cWW-cWW-R-R History status: New id, 2 parents	7	3
87	HL_86769.1 View exemplar Basepair signature: cWW-cSS-cSH History status: Exact match	7	3
88	HL_01472.1 View exemplar Basepair signature: cWW-R-tSW-R History status: Exact match	6	3
89	HL_33483.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, 1 parent	5	3
90	HL_98885.3 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: Updated, 2 parents	10	3
91	HL_58853.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: Exact match Varkud satellite (VS) ribozyme helix 1 (2)	8	3
92	HL_96776.2 View exemplar Basepair signature: cWW-R-cSW-R History status: Updated, 2 parents	6	3
93	HL_18218.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, > 2 parents	6	3
94	HL_91503.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: Exact match	9	3
95	HL_94352.2 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	3
96	HL_19162.2 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R-R History status: Updated, 1 parent	12	3
97	HL_80105.3 View exemplar Basepair signature: cWW-R-R-R-R History status: Updated, 2 parents	7	3
98	HL_49873.1 View exemplar Basepair signature: cWW-tSH-cWS-cWS-R History status: Exact match tRNA Leu D-loop (3)	8	3
99	HL_35442.1 View exemplar Basepair signature: cWW-tSW-R-R History status: Exact match	5	2
100	HL_49992.1 View exemplar Basepair signature: cWW-cWW-tWH-tWH-R-R History status: New id, 1 parent	10	2
101	HL_67052.1 View exemplar Basepair signature: cWW-bif-R-R-R-R History status: New id, 2 parents	8	2
102	HL_81205.1 View exemplar Basepair signature: cWW-cWW-R-R-tWH-R-tWH-R-R-R History status: Exact match	14	2
103	HL_35491.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	2
104	HL_94657.1 View exemplar Basepair signature: cWW-tHH-R-R-R History status: Exact match	7	2
105	HL_06048.1 View exemplar Basepair signature: cWW-R-cSS-cSS-R History status: Exact match	9	2
106	HL_38646.2 View exemplar Basepair signature: cWW-R-R-R-R History status: Updated, 1 parent	7	2
107	HL_50314.1 View exemplar Basepair signature: cWW History status: Exact match	3	2
108	HL_08510.1 View exemplar Basepair signature: cWW-F-F-cSH-F-F History status: Exact match	0	2
109	HL_24323.1 View exemplar Basepair signature: cWW-tWW-R-R-R-R-R-R History status: Exact match	10	2
110	HL_69941.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	2
111	HL_06097.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	2
112	HL_17217.1 View exemplar Basepair signature: cWW-R-tSW History status: New id, 2 parents	5	2
113	HL_60695.1 View exemplar Basepair signature: cWW-cWH-R History status: Exact match	5	2
114	HL_76406.3 View exemplar Basepair signature: cWW-cWH-R-R-R-R History status: Updated, 1 parent	9	2
115	HL_01181.1 View exemplar Basepair signature: cWW-tWH-R-R-R History status: Exact match	7	2
116	HL_24625.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	2
117	HL_47809.1 View exemplar Basepair signature: cWW-R-R History status: New id, 2 parents	5	2
118	HL_86378.1 View exemplar Basepair signature: cWW-cSH-R-R History status: Exact match	7	2
119	HL_78061.1 View exemplar Basepair signature: cWW-R-R-R-tWH-R-R-R History status: Exact match	10	2
120	HL_54357.1 View exemplar Basepair signature: cWW-cWW-R-cSH-R History status: Exact match	8	2
121	HL_93551.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	2
122	HL_40469.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	2
123	HL_61893.2 View exemplar Basepair signature: cWW-R-R-R History status: Updated, 1 parent	6	2
124	HL_91050.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: Exact match	7	2
125	HL_98870.1 View exemplar Basepair signature: cWW-tSH-tWW-F-F-F-F-F History status: Exact match	0	2
126	HL_20751.1 View exemplar Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F History status: Exact match	0	2
127	HL_86843.1 View exemplar Basepair signature: cWW-tSH-R-R-R History status: Exact match	7	2
128	HL_06483.1 View exemplar Basepair signature: cWW-tSH-cWS-cSH-R History status: New id, 2 parents	9	2
129	HL_61984.1 View exemplar Basepair signature: cWW History status: Exact match	3	2
130	HL_33507.2 View exemplar Basepair signature: cWW-R History status: Exact match	4	2
131	HL_82303.1 View exemplar Basepair signature: cWW-cWW-R-R History status: Exact match	7	2
132	HL_93650.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R-R-R-R-R-R-R History status: Exact match	15	2
133	HL_25762.1 View exemplar Basepair signature: cWW-bif-R-R History status: Exact match	6	2
134	HL_30596.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	2
135	HL_02255.1 View exemplar Basepair signature: cWW-cWS-R History status: Exact match	5	2
136	HL_11805.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	2
137	HL_55200.2 View exemplar Basepair signature: cWW-tSH-R-R History status: Updated, 1 parent	6	2
138	HL_05607.1 View exemplar Basepair signature: cWW-cWH-R History status: New id, 2 parents	5	2
139	HL_15968.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	2
140	HL_88982.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	2
141	HL_07432.1 View exemplar Basepair signature: cWW-R-R-cWS-cSH-R-R History status: Exact match	11	2
142	HL_12571.1 View exemplar Basepair signature: cWW-tSH-cWS-tSW-R-R-R-R-R History status: Exact match tRNA Leu D-loop (2)	13	2
143	HL_26772.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R-R-R-R History status: Exact match	11	2
144	HL_97126.1 View exemplar Basepair signature: cWW-R History status: New id, 2 parents	4	2
145	HL_00186.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	2
146	HL_07579.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R-R History status: Exact match	14	2
147	HL_31581.1 View exemplar Basepair signature: cWW-R-cSH-R-R-R-R-R-R History status: Exact match	12	2
148	HL_64887.1 View exemplar Basepair signature: cWW-cWS-R History status: New id, 2 parents	5	2
149	HL_12703.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	2
150	HL_27335.1 View exemplar Basepair signature: cWW-cWW-R History status: Exact match	6	2
151	HL_80705.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: Exact match	7	2
152	HL_02811.1 View exemplar Basepair signature: cWW-F-F History status: Exact match	0	1
153	HL_12710.1 View exemplar Basepair signature: cWW-cSH-cWW-R-R-tSH-R-R-R-R-R History status: Exact match	15	1
154	HL_23530.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
155	HL_45684.1 View exemplar Basepair signature: cWW-L-cWW-R-R-R-R-R History status: New id, 1 parent	11	1
156	HL_69459.1 View exemplar Basepair signature: cWW History status: Exact match	2	1
157	HL_83704.1 View exemplar Basepair signature: cWW-R-R-cSS-R History status: New id, no parents	8	1
158	HL_05832.1 View exemplar Basepair signature: cWW-cWW-tSW-R History status: New id, 1 parent	7	1
159	HL_27757.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
160	HL_37846.1 View exemplar Basepair signature: cWW-tWW-R-R-R History status: Exact match	7	1
161	HL_60357.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
162	HL_89785.1 View exemplar Basepair signature: cWW-tSH-cWH-cHW-R-cHW-cWH-cHW-cWH-tSH-cHW-R-R-cWH-cWH-cHW-cWH-cWH-tSH-R-R History status: Exact match	23	1
163	HL_98248.1 View exemplar Basepair signature: cWW-cSH-tHW-R-R-R History status: Exact match	10	1
164	HL_08291.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R-R-R-R History status: Exact match	11	1
165	HL_53849.1 View exemplar Basepair signature: cWW-cWW-R-cSW-R-cSH History status: Exact match	11	1
166	HL_02932.1 View exemplar Basepair signature: cWW-cSW-R-R-R-R-R-R-R History status: Exact match	11	1
167	HL_12773.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R-R-R-R History status: Exact match	13	1
168	HL_85984.1 View exemplar Basepair signature: cWW-L-R-R-L-cWW-cWW-R-R-R History status: Exact match	14	1
169	HL_28843.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-R-R-R-R-R-R-R History status: Exact match	14	1
170	HL_76360.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
171	HL_90197.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
172	HL_98252.1 View exemplar Basepair signature: cWW-tWW-F-F-F-F History status: Exact match	0	1
173	HL_01089.1 View exemplar Basepair signature: cWW-tSW-R-R-R-R History status: Exact match	8	1
174	HL_67205.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
175	HL_93221.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: Exact match	13	1
176	HL_03427.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
177	HL_12870.1 View exemplar Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F History status: Exact match	0	1
178	HL_35550.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, 1 parent	6	1
179	HL_46463.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
180	HL_58200.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
181	HL_29392.1 View exemplar Basepair signature: cWW-tWH-R-R-R-R History status: Exact match	8	1
182	HL_08602.1 View exemplar Basepair signature: cWW-cSS-F-cSS-F-F-F-F-F History status: Exact match	0	1
183	HL_20714.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R-R-R History status: Exact match	11	1
184	HL_43533.1 View exemplar Basepair signature: cWW-bif-tSH-R-R-R History status: New id, 1 parent	9	1
185	HL_93229.1 View exemplar Basepair signature: cWW-cWW History status: Exact match	5	1
186	HL_03603.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R History status: Exact match	15	1
187	HL_14286.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
188	HL_35888.1 View exemplar Basepair signature: cWW-F-F-F-F-F History status: Exact match	0	1
189	HL_58446.1 View exemplar Basepair signature: cWW-R-R-R-R-R-tSW-R-R History status: Exact match	12	1
190	HL_70505.1 View exemplar Basepair signature: cWW-cWW-tWW-R-R-R-R-R History status: New id, 1 parent	11	1
191	HL_95237.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
192	HL_06137.1 View exemplar Basepair signature: cWW-R-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-R-cWH-cWH History status: Exact match	16	1
193	HL_17899.1 View exemplar Basepair signature: cWW-R-tSW-R-R History status: Exact match	8	1
194	HL_90961.1 View exemplar Basepair signature: cWW-tSW History status: Exact match	4	1
195	HL_98841.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	1
196	HL_01187.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
197	HL_09712.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
198	HL_03847.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: Exact match	10	1
199	HL_25183.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
200	HL_58539.1 View exemplar Basepair signature: cWW-tWS-F-tHW-F-F-F-F-F-F-F-F History status: Exact match	0	1
201	HL_72066.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R History status: Exact match	8	1
202	HL_96277.1 View exemplar Basepair signature: cWW-cWW-tWH-R-R-R History status: Exact match	9	1
203	HL_06228.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
204	HL_30541.1 View exemplar Basepair signature: cWW-R-R History status: New id, 1 parent	5	1
205	HL_50959.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
206	HL_78351.1 View exemplar Basepair signature: cWW-R-cSH History status: New id, 1 parent	6	1
207	HL_10536.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-R History status: New id, 1 parent	10	1
208	HL_81820.1 View exemplar Basepair signature: cWW-tSH-tHW-tHW-cSH-F History status: Exact match	11	1
209	HL_93573.1 View exemplar Basepair signature: cWW-R-R-R History status: New id, 1 parent	6	1
210	HL_14725.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R History status: New id, 1 parent	9	1
211	HL_25619.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	1
212	HL_48962.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: Exact match	10	1
213	HL_58733.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R History status: Exact match	12	1
214	HL_72419.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-R-R History status: Exact match	11	1
215	HL_96487.1 View exemplar Basepair signature: cWW-R History status: New id, 1 parent	4	1
216	HL_17956.1 View exemplar Basepair signature: cWW-tSH-tHS-R-R History status: Exact match	8	1
217	HL_30585.1 View exemplar Basepair signature: cWW-R-R-R-cSS-R-cSW-R-R-R-R-R History status: Exact match	16	1
218	HL_41017.1 View exemplar Basepair signature: cWW-R History status: New id, 1 parent	4	1
219	HL_50967.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
220	HL_91131.1 View exemplar Basepair signature: cWW-cWW-R-R History status: Exact match	7	1
221	HL_01925.1 View exemplar Basepair signature: cWW-tSH-cWH-cHW-cHW-cWH-cHW-cWH-tSH-cHW-cWH-cWH-cHW-cWH-cWH-R-R History status: Exact match	19	1
222	HL_20891.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	1
223	HL_44221.1 View exemplar Basepair signature: cWW-cWW-R History status: Exact match	6	1
224	HL_55046.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
225	HL_68478.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
226	HL_14859.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
227	HL_36095.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: Exact match	9	1
228	HL_49194.1 View exemplar Basepair signature: cWW-R-R-R-R History status: New id, 1 parent	7	1
229	HL_06645.1 View exemplar Basepair signature: cWW-cWW-R History status: Exact match	6	1
230	HL_41285.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
231	HL_51090.1 View exemplar Basepair signature: cWW-cWS-R-R History status: Exact match tRNA Met D-loop (1)	6	1
232	HL_22443.1 View exemplar Basepair signature: cWW-R-tWH-R-tWH-R-R-R History status: New id, 1 parent	11	1
233	HL_33612.1 View exemplar Basepair signature: cWW-cWH-R-R History status: Exact match	6	1
234	HL_44769.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	1
235	HL_94032.1 View exemplar Basepair signature: cWW-cSH-F-F-F-F-F-F History status: New id, 1 parent	0	1
236	HL_59445.1 View exemplar Basepair signature: cWW-F-F-F-F-F History status: Exact match	7	1
237	HL_73051.1 View exemplar Basepair signature: cWW-cWW-cWH-cWH History status: Exact match	8	1
238	HL_96854.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R History status: New id, 1 parent	9	1
239	HL_07268.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	1
240	HL_30819.1 View exemplar Basepair signature: cWW-cSH-tSS-R-R History status: Exact match	8	1
241	HL_51284.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R History status: Exact match	10	1
242	HL_63693.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	1
243	HL_12053.1 View exemplar Basepair signature: cWW-tSH-R History status: Exact match	5	1
244	HL_23090.1 View exemplar Basepair signature: cWW-tSH-R-R-R-R History status: Exact match	8	1
245	HL_34135.1 View exemplar Basepair signature: cWW-cWW-tSH-R History status: New id, 1 parent	7	1
246	HL_44911.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
247	HL_56372.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
248	HL_82782.1 View exemplar Basepair signature: cWW-R-tSH-tHS-R-R-R-R-R-R-R-R-R-R History status: Exact match	18	1
249	HL_26501.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	1
250	HL_36552.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
251	HL_49213.1 View exemplar Basepair signature: cWW-tSH-tHW-R-R-R-R History status: New id, 1 parent	10	1
252	HL_59564.1 View exemplar Basepair signature: cWW-F-cSS-F-cSS-F-F-F-F-F-F-F-F-F-F-F-F History status: Exact match	0	1
253	HL_73235.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	1
254	HL_97049.1 View exemplar Basepair signature: cWW-cWS-cSH-R History status: New id, 1 parent	7	1
255	HL_18785.1 View exemplar Basepair signature: cWW-R-R History status: Exact match	5	1
256	HL_42211.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R History status: Exact match	13	1
257	HL_52657.1 View exemplar Basepair signature: cWW-tSH-tSH-bif-R-R-R-R-R-R-R History status: Exact match	15	1
258	HL_79564.1 View exemplar Basepair signature: cWW-tSH-cWH-cHW-R-cHW-cWH-cHW-cWH-tSH-cHW-R-cWH-cWH-cHW-cWH-cWH-tSH-R-R History status: Exact match	22	1
259	HL_92488.1 View exemplar Basepair signature: cWW-cWW-F-cSS-F-F-F-F-F-F History status: Exact match	0	1
260	HL_02483.1 View exemplar Basepair signature: cWW-tWH-F-cSH-F-F-F History status: Exact match	0	1
261	HL_23219.1 View exemplar Basepair signature: cWW-tSW-cWH-R-cSH History status: Exact match	6	1
262	HL_34516.1 View exemplar Basepair signature: cWW-R-cSH-R History status: Exact match	6	1
263	HL_45387.1 View exemplar Basepair signature: cWW-R-tSW History status: New id, 1 parent	5	1
264	HL_56500.1 View exemplar Basepair signature: cWW-cWW-F-cSH-F-F History status: Exact match	0	1
265	HL_68863.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R History status: Exact match	11	1
266	HL_82866.1 View exemplar Basepair signature: cWW-cWW-tWW-R-R-R-R-R-R-R-R-R-R-R History status: New id, 1 parent	17	1
267	HL_94363.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
268	HL_05667.1 View exemplar Basepair signature: cWW History status: Exact match	3	1
269	HL_16827.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
270	HL_49816.1 View exemplar Basepair signature: cWW-R-R-R History status: Exact match	6	1
271	HL_42671.1 View exemplar Basepair signature: cWW-R-R-tSS-R-R-R-R History status: Exact match	11	1
272	HL_53119.1 View exemplar Basepair signature: cWW-R-R-R-R-R History status: Exact match	8	1
273	HL_35010.1 View exemplar Basepair signature: cWW-tHH-cSH-R-R History status: Exact match	8	1
274	HL_45493.1 View exemplar Basepair signature: cWW-tSW-R-R History status: New id, no parents	6	1
275	HL_56606.1 View exemplar Basepair signature: cWW-R-cSH History status: Exact match	6	1
276	HL_83225.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
277	HL_94607.1 View exemplar Basepair signature: cWW-R-R-R-R History status: Exact match	7	1
278	HL_05692.1 View exemplar Basepair signature: cWW History status: Exact match	3	1
279	HL_37694.1 View exemplar Basepair signature: cWW-cWW-R-tSH-R-R History status: Exact match	9	1
280	HL_59988.1 View exemplar Basepair signature: cWW-tSH-tSH-R-R History status: Exact match	8	1
281	HL_74088.1 View exemplar Basepair signature: cWW-tSW-R-cWH-cHW-cHW-cWH-cHW-cWH-R-cWH-cWH-cWH-cWH-R History status: Exact match	18	1
282	HL_89184.1 View exemplar Basepair signature: cWW-R History status: Exact match	4	1
283	HL_97733.1 View exemplar Basepair signature: cWW-F-F-F-cSH-F History status: Exact match	0	1
284	HL_00996.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent	5	1
285	HL_32255.1 View exemplar Basepair signature: cWW-tWW-F-F-cWW-F-F History status: Exact match	0	1
286	HL_53189.1 View exemplar Basepair signature: cWW-F-F-F History status: Exact match	0	1
287	HL_93146.1 View exemplar Basepair signature: cWW History status: Exact match	3	1

Coloring options:
Nucleotide numbers

Exact match 183; New id, 1 parent 26; Updated, 1 parent 48; New id, 2 parents 14; New id, > 2 parents 6; Updated, 2 parents 8; New id, no parents 2;

Hairpin Loop Motif Atlas Release 3.12 Download Csv Json

Hairpin Loop Motif Atlas Release 3.12

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