Valid loops

#loop idlocationmotif
11/AA/25:30,1/AA/510:515NA
21/AA/36:37,1/AA/442:444NA
31/AA/43:44,1/AA/434:436NA
41/AA/81:85,1/AA/97:105NA
51/AA/183:184,1/AA/212:215NA
61/AA/188:194,1/AA/201:208NA
71/AA/239:245,1/AA/253:258NA
81/AA/271:272,1/AA/365:366NA
91/AA/273:273A,1/AA/363E:364NA
101/AA/273A:273C,1/AA/363C:363ENA
111/AA/288:292,1/AA/348:353NA
121/AA/292:295,1/AA/343:348NA
131/AA/672:674,1/AA/806:808NA
141/AA/674:678,1/AA/799:806NA
151/AA/697:698,1/AA/763:765NA
161/AA/703:707,1/AA/724:729NA
171/AA/738:741,1/AA/756:758NA
181/AA/837:838,1/AA/940:942NA
191/AA/844:846,1/AA/932:934NA
201/AA/846:850,1/AA/928:932NA
211/AA/858:860,1/AA/917:919NA
221/AA/860:862,1/AA/915:917NA
231/AA/862:863,1/AA/913:915NA
241/AA/864:868,1/AA/909:912NA
251/AA/870:872,1/AA/905:907NA
261/AA/952:954,1/AA/963:965NA
271/AA/994:996,1/AA/1159:1160NA
281/AA/998:1002,1/AA/1153:1157NA
291/AA/1004:1011,1/AA/1150:1151NA
301/AA/1011:1013,1/AA/1149:1150NA
311/AA/1019:1030,1/AA/1124:1143NA
321/AA/1031:1034,1/AA/1121:1123NA
331/AA/1055:1087,1/AA/1102:1104NA
341/AA/1087:1091,1/AA/1100:1102NA
351/AA/1165:1167,1/AA/1182:1184NA
361/AA/1197:1198,1/AA/1247:1249NA
371/AA/1202:1207,1/AA/1239:1243NA
381/AA/1208:1215,1/AA/1234:1238NA
391/AA/1219:1221,1/AA/1228:1230NA
401/AA/1319:1324,1/AA/1330:1333NA
411/AA/1351:1355,1/AA/1376:1380NA
421/AA/1357:1361,1/AA/1370:1374NA
431/AA/1415:1421,1/AA/1577:1587NA
441/AA/1421:1423,1/AA/1575:1577NA
451/AA/1432:1435,1/AA/1557:1561NA
461/AA/1437:1440,1/AA/1551:1555NA
471/AA/1448:1449A,1/AA/1462:1463NA
481/AA/1474:1478,1/AA/1515:1517NA
491/AA/1478:1482,1/AA/1507:1515NA
501/AA/1488:1491,1/AA/1499:1501NA
511/AA/1525:1531,1/AA/1540:1546NA
521/AA/1651:1656,1/AA/2004:2006NA
531/AA/1663:1665,1/AA/1995:1997NA
541/AA/1686:1691,1/AA/1696:1702NA
551/AA/1712:1717,1/AA/1742:1746NA
561/AA/1770:1771,1/AA/1980:1982NA
571/AA/1798:1804,1/AA/1813:1821NA
581/AA/1836:1840,1/AA/1902:1904NA
591/AA/1841:1842,1/AA/1898:1901NA
601/AA/1846:1849,1/AA/1893:1894NA
611/AA/1851:1855,1/AA/1887:1891NA
621/AA/1856:1860,1/AA/1882:1886NA
631/AA/1934:1945,1/AA/1961:1964NA
641/AA/2050:2052,1/AA/2617:2618NA
651/AA/2054:2056,1/AA/2612:2615NA
661/AA/2067:2069,1/AA/2442:2443NA
671/AA/2070:2071,1/AA/2438:2441NA
681/AA/2081:2083,1/AA/2236:2239NA
691/AA/2085:2087,1/AA/2232:2234NA
701/AA/2108:2110,1/AA/2179:2181NA
711/AA/2110:2120,1/AA/2178:2179NA
721/AA/2124:2127,1/AA/2161:2174NA
731/AA/2130:2136,1/AA/2155:2158NA
741/AA/2297:2299,1/AA/2317:2321NA
751/AA/2350:2353,1/AA/2364:2367NA
761/AA/2401:2403,1/AA/2414:2415NA
771/AA/2454:2455,1/AA/2496:2498NA
781/AA/2457:2460,1/AA/2490:2494NA
791/AA/2466:2470,1/AA/2480:2484NA
801/AA/2507:2508,1/AA/2580:2582NA
811/AA/2510:2512,1/AA/2574:2578NA
821/AA/2512:2513,1/AA/2571:2574NA
831/AA/2521:2522,1/AA/2541:2544NA
841/AA/2591:2592,1/AA/2601:2603NA
851/AA/2637:2640,1/AA/2774:2781NA
861/AA/2646:2648,1/AA/2672:2674NA
871/AA/2680:2684,1/AA/2725:2727NA
881/AA/2686:2691,1/AA/2718:2723NA
891/AA/2695:2696,1/AA/2711:2714NA
901/AA/2696:2698,1/AA/2709:2711NA
911/AA/2737:2742,1/AA/2762:2767NA
921/AA/2838:2839,1/AA/2878:2880NA
931/AA/2843:2845,1/AA/2871:2874NA
941/AA/2846:2852,1/AA/2865:2870NA
951/AB/8:10,1/AB/110:112NA
961/AB/17:18,1/AB/65:67NA
971/AB/22:29,1/AB/55:61NA
981/AB/30:31,1/AB/51:54NA
991/AB/34:38,1/AB/44:48NA
1001/AB/71:79,1/AB/97:105NA
1011/BA/30:32,1/BA/552:553NA
1021/BA/44:46,1/BA/395:398NA
1031/BA/47:52,1/BA/359:361NA
1041/BA/54:56,1/BA/356:357NA
1051/BA/63:66,1/BA/103:104NA
1061/BA/67:69,1/BA/99:102NA
1071/BA/129:131,1/BA/231:232NA
1081/BA/132:136,1/BA/227:230NA
1091/BA/148:153,1/BA/168:174NA
1101/BA/185:186B,1/BA/191E:192NA
1111/BA/242:247,1/BA/277:284NA
1121/BA/249:252,1/BA/274:275NA
1131/BA/292:293,1/BA/304:308NA
1141/BA/367:369,1/BA/392:393NA
1151/BA/371:375,1/BA/389:390NA
1161/BA/375:376,1/BA/387:389NA
1171/BA/409:416,1/BA/427:433NA
1181/BA/446:450,1/BA/483:488NA
1191/BA/450:455,1/BA/477:483NA
1201/BA/504:511,1/BA/540:541NA
1211/BA/515:521,1/BA/528:536NA
1221/BA/579:584,1/BA/757:762NA
1231/BA/594:596,1/BA/644:645NA
1241/BA/597:598,1/BA/640:643NA
1251/BA/605:612,1/BA/628:633NA
1261/BA/654:655,1/BA/751:754NA
1271/BA/657:658,1/BA/747:749NA
1281/BA/662:666,1/BA/740:743NA
1291/BA/673:677,1/BA/713:717NA
1301/BA/683:688,1/BA/699:707NA
1311/BA/774:778,1/BA/804:805NA
1321/BA/779:783,1/BA/799:803NA
1331/BA/887:894,1/BA/905:910NA
1341/BA/922:923,1/BA/1393:1395NA
1351/BA/925:927,1/BA/1390:1391NA
1361/BA/933:935,1/BA/1380:1384NA
1371/BA/953:954,1/BA/1226:1228NA
1381/BA/1025:1027,1/BA/1034:1036NA
1391/BA/1048:1050,1/BA/1208:1209NA
1401/BA/1052:1056,1/BA/1204:1206NA
1411/BA/1057:1058,1/BA/1199:1203NA
1421/BA/1060:1061,1/BA/1195:1197NA
1431/BA/1061:1063,1/BA/1193:1195NA
1441/BA/1124:1127,1/BA/1145:1149NA
1451/BA/1127:1132,1/BA/1142:1145NA
1461/BA/1247:1253,1/BA/1284:1290NA
1471/BA/1255:1258,1/BA/1277:1282NA
1481/BA/1258:1262,1/BA/1273:1277NA
1491/BA/1303:1308,1/BA/1329:1334NA
1501/BA/1401:1404,1/BA/1497:1501NA
1511/BA/1405:1410,1/BA/1490:1496NA
1521/BA/1412:1414,1/BA/1486:1488NA
1531/BA/1416:1419,1/BA/1481:1484NA
1541/BA/1430:1435,1/BA/1466:1470NA
1551/BA/1435:1437,1/BA/1464:1466NA
1561/BA/1440:1447,1/BA/1459:1461NA
1571/BD/49:52,1/BD/62:65NA

Problematic loops

#loop idProblemSequence
1AUC,GAU
2GGG,CCC
3CCC,GGG
4UUU,AAA
5UAG,CUA
6UGGGGUC,GACCCCA
7GCC,GGC
8GCC,GGC
9CUC,GAG
10GGGG,CCCC
11CUC,GAG

Valid loops

#loop idlocationmotif
11/AA/60:67NA
21/AA/87:95NA
31/AA/123:128NA
41/AA/137A:141ANA
51/AA/152:174NA
61/AA/194:201NA
71/AA/225:230NA
81/AA/245:253NA
91/AA/270J:270PNA
101/AA/305:312NA
111/AA/319:323NA
121/AA/327:335NA
131/AA/383:391NA
141/AA/411:416NA
151/AA/462:467NA
161/AA/487:493NA
171/AA/544:549NA
181/AA/564:577NA
191/AA/605:623NA
201/AA/629:634NA
211/AA/638:650NA
221/AA/712:719NA
231/AA/744:753NA
241/AA/779:785NA
251/AA/826:831NA
261/AA/873:904NA
271/AA/955:962NA
281/AA/978:985NA
291/AA/1092:1099NA
301/AA/1170:1179NA
311/AA/1221:1228NA
321/AA/1281:1289NA
331/AA/1324:1330NA
341/AA/1362:1369NA
351/AA/1389:1398NA
361/AA/1450:1461NA
371/AA/1492:1498NA
381/AA/1533:1538NA
391/AA/1612:1619NA
401/AA/1630:1636NA
411/AA/1691:1696NA
421/AA/1717:1742NA
431/AA/1752:1756NA
441/AA/1779:1785NA
451/AA/1806:1811NA
461/AA/1864:1878NA
471/AA/1909:1922NA
481/AA/1950:1956NA
491/AA/2027:2036NA
501/AA/2143:2148NA
511/AA/2209:2215NA
521/AA/2249:2255NA
531/AA/2264:2276NA
541/AA/2304:2312NA
551/AA/2324:2331NA
561/AA/2355:2362NA
571/AA/2374:2379NA
581/AA/2404:2413NA
591/AA/2471:2479NA
601/AA/2528:2535NA
611/AA/2551:2557NA
621/AA/2594:2599NA
631/AA/2648:2672NA
641/AA/2701:2706NA
651/AA/2746:2758NA
661/AA/2819:2827NA
671/AA/2856:2861NA
681/AB/38:44NA
691/AB/86:90NA
701/BA/12:22NA
711/BA/81:88NA
721/BA/158:163NA
731/BA/186F:191ANA
741/BA/201:216NA
751/BA/259:267NA
761/BA/296:301NA
771/BA/320:333NA
781/BA/342:347NA
791/BA/379:384NA
801/BA/419:424NA
811/BA/458:474NA
821/BA/522:527NA
831/BA/617:623NA
841/BA/689:698NA
851/BA/726:731NA
861/BA/786:796NA
871/BA/838:848NA
881/BA/862:867NA
891/BA/897:902NA
901/BA/963:972NA
911/BA/1012:1017NA
921/BA/1028B:1032ANA
931/BA/1076:1081NA
941/BA/1089:1096NA
951/BA/1134:1140NA
961/BA/1165:1171NA
971/BA/1265:1270NA
981/BA/1314:1323NA
991/BA/1356:1366NA
1001/BA/1449:1454NA
1011/BA/1515:1520NA
1021/BC/13:22NA
1031/BC/30:40NA
1041/BC/53:61NA
1051/BD/13:22NA
1061/BD/31:39NA
1071/BD/53:61NA
1081/BE/13:22NA
1091/BE/31:39NA
1101/BE/53:61NA

Problematic loops

No problematic loops

Valid loops

#loop idlocationmotif
11/AA/683:687,1/AA/775:777,1/AA/787:794NA
21/AA/698:700,1/AA/732:736,1/AA/760:763NA
31/AA/1298:1303,1/AA/1625:1627,1/AA/1639:1642NA
41/AA/1306:1309,1/AA/1605:1611,1/AA/1620:1622NA
51/AA/1343:1350,1/AA/1381:1385,1/AA/1402:1404NA
61/AA/2090:2093,1/AA/2196:2205,1/AA/2219:2229NA
71/AA/2295:2297,1/AA/2321:2323,1/AA/2332:2337NA
81/AA/2517:2520,1/AA/2545:2547,1/AA/2561:2567NA
91/AB/11:16,1/AB/68:70,1/AB/106:109NA
101/BA/826:829,1/BA/857:861,1/BA/868:874NA
111/BA/936:939,1/BA/1344:1350,1/BA/1372:1379NA
121/BA/943:946,1/BA/1235:1237,1/BA/1337:1340NA
131/BA/955:962,1/BA/973:984,1/BA/1221:1225NA
141/BA/990:997,1/BA/1044:1047,1/BA/1210:1215NA
151/BA/1064:1068,1/BA/1107:1113,1/BA/1187:1192NA
161/BA/1116:1118,1/BA/1155:1162,1/BA/1174:1184NA
171/BA/1237:1241,1/BA/1296:1303,1/BA/1334:1337NA

Problematic loops

No problematic loops


Coloring options: