Valid loops

#loop idlocationmotif
11/AA/30:33,1/AA/551:553NA
21/AA/44:45,1/AA/396:398NA
31/AA/47:52,1/AA/359:361NA
41/AA/54:56,1/AA/356:357NA
51/AA/63:66,1/AA/103:104NA
61/AA/67:69,1/AA/99:102NA
71/AA/70:73,1/AA/97:98NA
81/AA/75:76,1/AA/93:95NA
91/AA/128:131,1/AA/231:233NA
101/AA/132:136,1/AA/227:230NA
111/AA/144:146,1/AA/176:178NA
121/AA/147:153,1/AA/168:175NA
131/AA/203:206,1/AA/213:214NA
141/AA/242:247,1/AA/277:284NA
151/AA/248:253,1/AA/273:276NA
161/AA/292:293,1/AA/304:308NA
171/AA/367:369,1/AA/392:393NA
181/AA/371:375,1/AA/389:390NA
191/AA/375:376,1/AA/387:389NA
201/AA/409:416,1/AA/427:433NA
211/AA/440:442,1/AA/492:497NA
221/AA/446:450,1/AA/483:488NA
231/AA/450:455,1/AA/477:483NA
241/AA/457:459,1/AA/472:475NA
251/AA/460:462,1/AA/470:471NA
261/AA/504:511,1/AA/540:541NA
271/AA/515:521,1/AA/528:536NA
281/AA/569:575,1/AA/880:881NA
291/AA/580:584,1/AA/757:761NA
301/AA/594:596,1/AA/644:645NA
311/AA/597:598,1/AA/640:643NA
321/AA/605:612,1/AA/628:633NA
331/AA/654:655,1/AA/751:754NA
341/AA/659:660,1/AA/745:747NA
351/AA/662:666,1/AA/740:743NA
361/AA/673:678,1/AA/712:717NA
371/AA/684:688,1/AA/699:706NA
381/AA/774:778,1/AA/804:805NA
391/AA/779:783,1/AA/799:803NA
401/AA/887:894,1/AA/905:910NA
411/AA/922:923,1/AA/1393:1395NA
421/AA/925:927,1/AA/1390:1391NA
431/AA/933:935,1/AA/1380:1384NA
441/AA/953:954,1/AA/1226:1228NA
451/AA/993:998,1/AA/1043:1045NA
461/AA/998:999,1/AA/1041:1043NA
471/AA/1048:1050,1/AA/1208:1209NA
481/AA/1050:1052,1/AA/1206:1208NA
491/AA/1052:1056,1/AA/1204:1206NA
501/AA/1057:1058,1/AA/1199:1203NA
511/AA/1060:1063,1/AA/1193:1197NA
521/AA/1124:1128,1/AA/1144:1149NA
531/AA/1129:1132,1/AA/1142:1143NA
541/AA/1158:1161,1/AA/1175:1181NA
551/AA/1247:1253,1/AA/1284:1290NA
561/AA/1255:1258,1/AA/1277:1282NA
571/AA/1259:1263,1/AA/1272:1276NA
581/AA/1303:1308,1/AA/1329:1334NA
591/AA/1399:1401,1/AA/1501:1504NA
601/AA/1401:1404,1/AA/1497:1501NA
611/AA/1405:1409,1/AA/1491:1496NA
621/AA/1412:1415,1/AA/1485:1488NA
631/AA/1416:1419,1/AA/1481:1484NA
641/AA/1430:1435,1/AA/1466:1470NA
651/AA/1440:1442,1/AA/1460:1461NA
661/AA/1445:1448,1/AA/1455:1457NA
671/AA/1511:1514,1/AA/1521:1524NA
681/BA/24:30,1/BA/510:516NA
691/BA/36:37,1/BA/442:444NA
701/BA/43:44,1/BA/434:436NA
711/BA/81:85,1/BA/97:105NA
721/BA/183:184,1/BA/212:214NA
731/BA/188:194,1/BA/201:208NA
741/BA/239:245,1/BA/253:258NA
751/BA/269:271,1/BA/366:370NA
761/BA/274:281,1/BA/359:363NA
771/BA/293:295,1/BA/343:347NA
781/BA/481:484,1/BA/496:509NA
791/BA/536:539,1/BA/554:557NA
801/BA/606:610,1/BA/618:622NA
811/BA/672:674,1/BA/806:808NA
821/BA/674:678,1/BA/799:806NA
831/BA/697:698,1/BA/763:765NA
841/BA/702:703,1/BA/728:730NA
851/BA/703:707,1/BA/724:728NA
861/BA/738:740,1/BA/757:758NA
871/BA/775:777,1/BA/787:791NA
881/BA/843:845,1/BA/934:935NA
891/BA/845:848,1/BA/930:934NA
901/BA/849:851,1/BA/926:929NA
911/BA/856:862,1/BA/915:921NA
921/BA/862:863,1/BA/913:915NA
931/BA/864:868,1/BA/909:912NA
941/BA/869:872,1/BA/905:908NA
951/BA/875:879,1/BA/898:902NA
961/BA/879:881,1/BA/895:898NA
971/BA/881:885,1/BA/891:895NA
981/BA/994:996,1/BA/1159:1160NA
991/BA/998:1002,1/BA/1153:1157NA
1001/BA/1004:1011,1/BA/1150:1151NA
1011/BA/1011:1013,1/BA/1149:1150NA
1021/BA/1018:1024,1/BA/1140:1144NA
1031/BA/1024:1030,1/BA/1124:1140NA
1041/BA/1031:1034,1/BA/1121:1123NA
1051/BA/1038:1041,1/BA/1114:1117NA
1061/BA/1043:1051,1/BA/1108:1112NA
1071/BA/1059:1062,1/BA/1076:1079NA
1081/BA/1087:1090,1/BA/1101:1102NA
1091/BA/1196:1198,1/BA/1247:1250NA
1101/BA/1202:1206,1/BA/1240:1243NA
1111/BA/1208:1215,1/BA/1234:1238NA
1121/BA/1262:1269,1/BA/2011:2017NA
1131/BA/1310:1313,1/BA/1603:1604NA
1141/BA/1319:1323,1/BA/1331:1333NA
1151/BA/1351:1355,1/BA/1376:1380NA
1161/BA/1357:1361,1/BA/1370:1374NA
1171/BA/1415:1416,1/BA/1582:1587NA
1181/BA/1417:1421,1/BA/1577:1581NA
1191/BA/1432:1435,1/BA/1557:1561NA
1201/BA/1437:1440,1/BA/1551:1555NA
1211/BA/1468:1471,1/BA/1520:1524NA
1221/BA/1474:1478,1/BA/1513:1517NA
1231/BA/1481:1482,1/BA/1507:1510NA
1241/BA/1489:1491,1/BA/1499:1500NA
1251/BA/1526:1529,1/BA/1542:1546NA
1261/BA/1651:1656,1/BA/2004:2006NA
1271/BA/1663:1665,1/BA/1995:1997NA
1281/BA/1666:1669,1/BA/1993:1994NA
1291/BA/1669:1674,1/BA/1990:1993NA
1301/BA/1686:1691,1/BA/1696:1702NA
1311/BA/1712:1718,1/BA/1742:1746NA
1321/BA/1720:1724,1/BA/1736:1740NA
1331/BA/1727:1728,1/BA/1731:1733NA
1341/BA/1770:1771,1/BA/1980:1982NA
1351/BA/1798:1804,1/BA/1813:1821NA
1361/BA/1837:1840,1/BA/1902:1903NA
1371/BA/1841:1842,1/BA/1898:1901NA
1381/BA/1846:1849,1/BA/1893:1894NA
1391/BA/1864:1867,1/BA/1874:1878NA
1401/BA/1933:1934,1/BA/1964:1967NA
1411/BA/1934:1945,1/BA/1961:1964NA
1421/BA/2050:2052,1/BA/2617:2618NA
1431/BA/2054:2056,1/BA/2612:2615NA
1441/BA/2064:2066,1/BA/2444:2446NA
1451/BA/2067:2071,1/BA/2438:2443NA
1461/BA/2081:2083,1/BA/2236:2239NA
1471/BA/2085:2087,1/BA/2232:2234NA
1481/BA/2103:2105,1/BA/2184:2186NA
1491/BA/2108:2120,1/BA/2177:2181NA
1501/BA/2120:2123,1/BA/2175:2177NA
1511/BA/2124:2128,1/BA/2160:2174NA
1521/BA/2128:2136,1/BA/2155:2160NA
1531/BA/2202:2204,1/BA/2220:2221NA
1541/BA/2302:2304,1/BA/2313:2314NA
1551/BA/2350:2353,1/BA/2364:2367NA
1561/BA/2401:2403,1/BA/2414:2415NA
1571/BA/2453:2455,1/BA/2496:2500NA
1581/BA/2456:2459,1/BA/2493:2495NA
1591/BA/2459:2461,1/BA/2489:2493NA
1601/BA/2466:2470,1/BA/2480:2484NA
1611/BA/2507:2509,1/BA/2579:2582NA
1621/BA/2510:2512,1/BA/2574:2578NA
1631/BA/2512:2513,1/BA/2571:2574NA
1641/BA/2522:2523,1/BA/2540:2543NA
1651/BA/2588:2590,1/BA/2604:2606NA
1661/BA/2591:2592,1/BA/2601:2603NA
1671/BA/2636:2640,1/BA/2774:2782NA
1681/BA/2652:2658,1/BA/2663:2668NA
1691/BA/2680:2684,1/BA/2725:2727NA
1701/BA/2687:2691,1/BA/2718:2722NA
1711/BA/2695:2696,1/BA/2711:2714NA
1721/BA/2737:2742,1/BA/2762:2767NA
1731/BA/2806:2811,1/BA/2889:2892NA
1741/BA/2838:2839,1/BA/2878:2880NA
1751/BA/2843:2846,1/BA/2870:2874NA
1761/BA/2847:2853,1/BA/2864:2869NA
1771/Ba/4:6,1/Ba/114:116NA
1781/Ba/17:18,1/Ba/65:67NA
1791/Ba/21:23,1/Ba/60:62NA
1801/Ba/23:28,1/Ba/56:60NA
1811/Ba/30:31,1/Ba/51:54NA
1821/Ba/34:38,1/Ba/44:48NA
1831/Ba/71:79,1/Ba/97:105NA

Problematic loops

#loop idProblemSequence
1UGC,GCA

Valid loops

#loop idlocationmotif
11/A2/25:29NA
21/A3/13:23NA
31/A3/32:40NA
41/A3/54:62NA
51/AA/11:23NA
61/AA/83:86NA
71/AA/158:163NA
81/AA/186:191NA
91/AA/207:212NA
101/AA/259:267NA
111/AA/296:301NA
121/AA/320:333NA
131/AA/342:347NA
141/AA/379:384NA
151/AA/419:424NA
161/AA/462:470NA
171/AA/521:528NA
181/AA/617:623NA
191/AA/689:698NA
201/AA/726:731NA
211/AA/786:796NA
221/AA/840:846NA
231/AA/862:867NA
241/AA/897:902NA
251/AA/963:972NA
261/AA/1012:1017NA
271/AA/1028:1033NA
281/AA/1076:1081NA
291/AA/1089:1096NA
301/AA/1134:1140NA
311/AA/1165:1171NA
321/AA/1265:1270NA
331/AA/1314:1323NA
341/AA/1356:1366NA
351/AA/1449:1454NA
361/AA/1515:1520NA
371/BA/59:68NA
381/BA/86:96NA
391/BA/123:128NA
401/BA/137:142NA
411/BA/158:168NA
421/BA/194:201NA
431/BA/225:230NA
441/BA/246:252NA
451/BA/305:312NA
461/BA/319:323NA
471/BA/327:335NA
481/BA/382:392NA
491/BA/410:417NA
501/BA/462:467NA
511/BA/487:493NA
521/BA/543:550NA
531/BA/564:577NA
541/BA/611:617NA
551/BA/629:634NA
561/BA/641:647NA
571/BA/712:719NA
581/BA/744:753NA
591/BA/779:785NA
601/BA/826:831NA
611/BA/885:891NA
621/BA/954:963NA
631/BA/978:985NA
641/BA/1064:1074NA
651/BA/1092:1099NA
661/BA/1172:1177NA
671/BA/1222:1227NA
681/BA/1281:1289NA
691/BA/1324:1330NA
701/BA/1363:1368NA
711/BA/1389:1398NA
721/BA/1450:1461NA
731/BA/1492:1498NA
741/BA/1533:1538NA
751/BA/1565:1568NA
761/BA/1612:1619NA
771/BA/1629:1637NA
781/BA/1691:1696NA
791/BA/1728:1731NA
801/BA/1752:1756NA
811/BA/1777:1787NA
821/BA/1806:1811NA
831/BA/1868:1873NA
841/BA/1910:1920NA
851/BA/1949:1957NA
861/BA/2027:2036NA
871/BA/2143:2148NA
881/BA/2209:2215NA
891/BA/2248:2256NA
901/BA/2264:2276NA
911/BA/2304:2313NA
921/BA/2324:2331NA
931/BA/2356:2361NA
941/BA/2374:2379NA
951/BA/2404:2413NA
961/BA/2471:2479NA
971/BA/2528:2535NA
981/BA/2551:2557NA
991/BA/2594:2599NA
1001/BA/2658:2663NA
1011/BA/2701:2706NA
1021/BA/2745:2759NA
1031/BA/2796:2800NA
1041/BA/2819:2827NA
1051/BA/2856:2861NA
1061/Ba/38:44NA
1071/Ba/85:91NA

Problematic loops

No problematic loops

Valid loops

#loop idlocationmotif
11/AA/46:47,1/AA/361:367,1/AA/393:395NA
21/AA/586:588,1/AA/651:654,1/AA/754:755NA
31/AA/672:673,1/AA/717:725,1/AA/732:734NA
41/AA/826:829,1/AA/857:861,1/AA/868:874NA
51/AA/936:939,1/AA/1344:1350,1/AA/1372:1379NA
61/AA/943:946,1/AA/1235:1237,1/AA/1337:1340NA
71/AA/955:962,1/AA/973:984,1/AA/1221:1225NA
81/AA/990:993,1/AA/1045:1047,1/AA/1210:1215NA
91/AA/1003:1006,1/AA/1023:1027,1/AA/1034:1037NA
101/AA/1063:1068,1/AA/1107:1113,1/AA/1187:1193NA
111/AA/1073:1074,1/AA/1083:1087,1/AA/1098:1102NA
121/AA/1116:1118,1/AA/1155:1158,1/AA/1181:1184NA
131/AA/1237:1241,1/AA/1296:1303,1/AA/1334:1337NA
141/BA/30:31,1/BA/474:481,1/BA/509:510NA
151/BA/32:35,1/BA/445:461,1/BA/468:473NA
161/BA/56:57,1/BA/70:76,1/BA/110:114NA
171/BA/683:689,1/BA/773:775,1/BA/791:794NA
181/BA/698:700,1/BA/732:736,1/BA/760:763NA
191/BA/1055:1057,1/BA/1081:1087,1/BA/1102:1104NA
201/BA/1298:1303,1/BA/1625:1627,1/BA/1639:1642NA
211/BA/1306:1309,1/BA/1605:1611,1/BA/1620:1622NA
221/BA/2091:2093,1/BA/2196:2200,1/BA/2223:2228NA
231/BA/2295:2299,1/BA/2317:2323,1/BA/2332:2337NA
241/BA/2516:2520,1/BA/2545:2547,1/BA/2561:2568NA
251/BA/2789:2791,1/BA/2805:2806,1/BA/2892:2894NA
261/BA/2812:2815,1/BA/2831:2836,1/BA/2882:2888NA
271/Ba/10:16,1/Ba/68:70,1/Ba/106:110NA

Problematic loops

No problematic loops


Coloring options: