5Z3G | Motifs

Valid loops

#	loop id	location	annotation	motif
1	HL_5Z3G_001 ➜	1/A/38:45	NA	NA
2	HL_5Z3G_002 ➜	1/A/69:74	NA	NA
3	HL_5Z3G_003 ➜	1/A/90:96	NA	NA
4	HL_5Z3G_004 ➜	1/A/132:136	NA	NA
5	HL_5Z3G_005 ➜	1/A/194:201	NA	NA
6	HL_5Z3G_006 ➜	1/A/208:212	NA	NA
7	HL_5Z3G_007 ➜	1/A/216:224	NA	NA
8	HL_5Z3G_008 ➜	1/A/278:287	NA	NA
9	HL_5Z3G_009 ➜	1/A/357:362	NA	NA
10	HL_5Z3G_010 ➜	1/A/382:387	NA	NA
11	HL_5Z3G_012 ➜	1/A/543:548	NA	NA
12	HL_5Z3G_013 ➜	1/A/599:604	NA	NA
13	HL_5Z3G_014 ➜	1/A/640:649	NA	NA
14	HL_5Z3G_015 ➜	1/A/686:694	NA	NA
15	HL_5Z3G_016 ➜	1/A/732:737	NA	NA
16	HL_5Z3G_018 ➜	1/A/958:963	NA	NA
17	HL_5Z3G_021 ➜	1/A/1148:1155	NA	NA
18	HL_5Z3G_023 ➜	1/A/1346:1358	NA	NA
19	HL_5Z3G_024 ➜	1/A/1403:1408	NA	NA
20	HL_5Z3G_026 ➜	1/A/3018:3036	NA	NA
21	HL_5Z3G_027 ➜	1/A/3067:3074	NA	NA
22	HL_5Z3G_028 ➜	1/A/3110:3124	NA	NA
23	HL_5Z3G_029 ➜	1/A/3194:3197	NA	NA
24	HL_5Z3G_031 ➜	1/A/3303:3311	NA	NA
25	HL_5Z3G_032 ➜	1/B/47:56	NA	NA
26	HL_5Z3G_033 ➜	1/B/69:89	NA	NA
27	HL_5Z3G_034 ➜	1/B/108:114	NA	NA
28	HL_5Z3G_035 ➜	1/B/124:129	NA	NA
29	HL_5Z3G_036 ➜	1/C/11:17	NA	NA
30	HL_5Z3G_037 ➜	1/C/35:44	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_5Z3G_011 ➜	missing nts	NA
2	HL_5Z3G_017 ➜	missing nts	NA
3	HL_5Z3G_019 ➜	missing nts	NA
4	HL_5Z3G_020 ➜	missing nts	NA
5	HL_5Z3G_022 ➜	missing nts	NA
6	HL_5Z3G_025 ➜	missing nts	NA
7	HL_5Z3G_030 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_5Z3G_001 ➜	1/A/7:8,1/B/150:152	NA	NA
2	IL_5Z3G_002 ➜	1/A/13:15,1/B/144:145	NA	NA
3	IL_5Z3G_003 ➜	1/A/27:28,1/A/56:58	NA	NA
4	IL_5Z3G_004 ➜	1/A/31:38,1/A/45:53	NA	NA
5	IL_5Z3G_005 ➜	1/A/82:89,1/A/97:103	NA	NA
6	IL_5Z3G_006 ➜	1/A/123:124,1/A/144:149	NA	NA
7	IL_5Z3G_007 ➜	1/A/125:127,1/A/141:143	NA	NA
8	IL_5Z3G_009 ➜	1/A/169:171,1/A/247:253	NA	NA
9	IL_5Z3G_010 ➜	1/A/177:179,1/A/237:241	NA	NA
10	IL_5Z3G_011 ➜	1/A/189:191,1/A/204:205	NA	NA
11	IL_5Z3G_012 ➜	1/A/272:274,1/A/291:293	NA	NA
12	IL_5Z3G_013 ➜	1/A/337:339,1/B/25:26	NA	NA
13	IL_5Z3G_014 ➜	1/A/376:379,1/A/390:403	NA	NA
14	IL_5Z3G_015 ➜	1/A/404:410,1/B/13:19	NA	NA
15	IL_5Z3G_016 ➜	1/A/428:431,1/A/628:631	NA	NA
16	IL_5Z3G_020 ➜	1/A/512:513,1/A/577:579	NA	NA
17	IL_5Z3G_021 ➜	1/A/517:525,1/A/567:573	NA	NA
18	IL_5Z3G_022 ➜	1/A/531:538,1/A/553:561	NA	NA
19	IL_5Z3G_023 ➜	1/A/668:670,1/A/792:794	NA	NA
20	IL_5Z3G_024 ➜	1/A/680:684,1/A/696:700	NA	NA
21	IL_5Z3G_025 ➜	1/A/725:728,1/A/741:745	NA	NA
22	IL_5Z3G_026 ➜	1/A/752:753,1/A/779:781	NA	NA
23	IL_5Z3G_027 ➜	1/A/755:758,1/A/773:777	NA	NA
24	IL_5Z3G_028 ➜	1/A/803:805,1/A/938:940	NA	NA
25	IL_5Z3G_029 ➜	1/A/805:809,1/A/931:938	NA	NA
26	IL_5Z3G_030 ➜	1/A/954:957,1/A/964:967	NA	NA
27	IL_5Z3G_031 ➜	1/A/969:972,1/A/1109:1113	NA	NA
28	IL_5Z3G_032 ➜	1/A/972:982,1/A/1101:1109	NA	NA
29	IL_5Z3G_033 ➜	1/A/983:985,1/A/1099:1100	NA	NA
30	IL_5Z3G_034 ➜	1/A/986:987,1/A/1062:1098	NA	NA
31	IL_5Z3G_035 ➜	1/A/1120:1122,1/A/1136:1138	NA	NA
32	IL_5Z3G_036 ➜	1/A/1167:1171,1/A/1328:1332	NA	NA
33	IL_5Z3G_037 ➜	1/A/1173:1174,1/A/1312:1326	NA	NA
34	IL_5Z3G_038 ➜	1/A/1207:1209,1/A/1296:1297	NA	NA
35	IL_5Z3G_039 ➜	1/A/1376:1378,1/A/1428:1431	NA	NA
36	IL_5Z3G_041 ➜	1/A/1388:1395,1/A/1415:1419	NA	NA
37	IL_5Z3G_043 ➜	1/A/1444:1450,1/A/2354:2359	NA	NA
38	IL_5Z3G_044 ➜	1/A/3004:3007,1/A/3139:3144	NA	NA
39	IL_5Z3G_045 ➜	1/A/3012:3014,1/A/3040:3042	NA	NA
40	IL_5Z3G_046 ➜	1/A/3047:3051,1/A/3091:3094	NA	NA
41	IL_5Z3G_047 ➜	1/A/3054:3059,1/A/3084:3088	NA	NA
42	IL_5Z3G_049 ➜	1/A/3103:3107,1/A/3127:3131	NA	NA
43	IL_5Z3G_050 ➜	1/A/3164:3166,1/A/3284:3286	NA	NA
44	IL_5Z3G_051 ➜	1/A/3177:3179,1/A/3210:3211	NA	NA
45	IL_5Z3G_052 ➜	1/A/3179:3188,1/A/3204:3210	NA	NA
46	IL_5Z3G_053 ➜	1/A/3193:3194,1/A/3197:3199	NA	NA
47	IL_5Z3G_057 ➜	1/A/3300:3303,1/A/3311:3314	NA	NA
48	IL_5Z3G_058 ➜	1/A/3318:3320,1/A/3387:3388	NA	NA
49	IL_5Z3G_059 ➜	1/A/3324:3325,1/A/3381:3383	NA	NA
50	IL_5Z3G_061 ➜	1/A/3331:3337,1/A/3367:3372	NA	NA
51	IL_5Z3G_062 ➜	1/B/64:66,1/B/93:96	NA	NA
52	IL_5Z3G_063 ➜	1/B/68:69,1/B/89:91	NA	NA
53	IL_5Z3G_064 ➜	1/C/29:34,1/C/45:49	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_5Z3G_008 ➜	missing nts	NA
2	IL_5Z3G_017 ➜	missing nts	NA
3	IL_5Z3G_018 ➜	missing nts	NA
4	IL_5Z3G_019 ➜	missing nts	NA
5	IL_5Z3G_040 ➜	missing nts	NA
6	IL_5Z3G_042 ➜	missing nts	NA
7	IL_5Z3G_048 ➜	missing nts	NA
8	IL_5Z3G_054 ➜	missing nts	NA
9	IL_5Z3G_055 ➜	missing nts	NA
10	IL_5Z3G_056 ➜	missing nts	NA
11	IL_5Z3G_060 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_5Z3G_001 ➜	1/A/369:376,1/A/403:404,1/B/19:20	NA	NA
2	J3_5Z3G_002 ➜	1/A/502:503,1/A/588:597,1/A/606:611	NA	NA
3	J3_5Z3G_003 ➜	1/A/3298:3300,1/A/3314:3318,1/A/3388:3390	NA	NA
4	J3_5Z3G_004 ➜	1/B/44:45,1/B/58:64,1/B/96:100	NA	NA

Problematic loops

No problematic loops

5Z3G Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops