8E30 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
HL_8E30_001 | 1/I/59:68 | No text annotation Not in a motif group | homologous HL_5J7L_134 HL_18177.1 | |
HL_8E30_002 | 1/I/87:95 | No text annotation Not in a motif group | homologous HL_5J7L_135 HL_00807.1 | |
HL_8E30_003 | 1/I/123:128 | No text annotation Not in a motif group | homologous HL_5J7L_136 HL_70546.2 | |
HL_8E30_004 | 1/I/137:142 | UNCG Not in a motif group | geometric HL_4PMI_004 HL_29960.1 | |
HL_8E30_005 | 1/I/158:168 | No text annotation Not in a motif group | homologous HL_5J7L_138 HL_81820.1 | |
HL_8E30_006 | 1/I/194:201 | No text annotation Not in a motif group | homologous HL_5J7L_139 HL_06192.3 | |
HL_8E30_007 | 1/I/225:230 | No text annotation Not in a motif group | homologous HL_5J7L_140 HL_56241.2 | |
HL_8E30_008 | 1/I/246:252 | No text annotation Not in a motif group | homologous HL_7RQB_008 NA | |
HL_8E30_009 | 1/I/305:312 | T-loop with 1 bulged base Not in a motif group | homologous HL_5J7L_142 HL_41998.2 | |
HL_8E30_010 | 1/I/319:323 | No text annotation Not in a motif group | homologous HL_5J7L_143 HL_70546.2 | |
HL_8E30_011 | 1/I/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.10 | |
HL_8E30_012 | 1/I/382:392 | No text annotation Not in a motif group | homologous HL_5J7L_145 HL_91503.5 | |
HL_8E30_013 | 1/I/410:417 | No text annotation Not in a motif group | homologous HL_5J7L_146 HL_96598.2 | |
HL_8E30_014 | 1/I/462:467 | No text annotation Not in a motif group | homologous HL_7RQB_015 NA | |
HL_8E30_015 | 1/I/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_85603.1 | |
HL_8E30_016 | 1/I/543:550 | No text annotation Not in a motif group | ||
HL_8E30_017 | 1/I/566:575 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_150 HL_41998.2 | |
HL_8E30_018 | 1/I/611:617 | No text annotation Not in a motif group | homologous HL_5J7L_151 HL_90617.4 | |
HL_8E30_019 | 1/I/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_85603.1 | |
HL_8E30_020 | 1/I/641:647 | No text annotation Not in a motif group | homologous HL_5J7L_153 HL_77805.2 | |
HL_8E30_021 | 1/I/712:719 | No text annotation Not in a motif group | geometric HL_5J7L_151 HL_90617.4 | |
HL_8E30_022 | 1/I/744:753 | No text annotation Not in a motif group | homologous HL_5J7L_155 NA | |
HL_8E30_023 | 1/I/779:785 | No text annotation Not in a motif group | homologous HL_7A0S_023 HL_56241.2 | |
HL_8E30_024 | 1/I/826:831 | No text annotation Not in a motif group | homologous HL_7RQB_025 NA | |
HL_8E30_025 | 1/I/879:898 | No text annotation Not in a motif group | ||
HL_8E30_026 | 1/I/954:963 | No text annotation Not in a motif group | homologous HL_5J7L_159 NA | |
HL_8E30_027 | 1/I/978:985 | No text annotation Not in a motif group | homologous HL_5J7L_160 HL_64430.3 | |
HL_8E30_028 | 1/I/1063:1075 | No text annotation Not in a motif group | ||
HL_8E30_029 | 1/I/1091:1100 | No text annotation Not in a motif group | ||
HL_8E30_030 | 1/I/1168:1181 | No text annotation Not in a motif group | ||
HL_8E30_031 | 1/I/1222:1227 | Other HL Not in a motif group | homologous HL_5J7L_164 HL_87030.3 | |
HL_8E30_032 | 1/I/1281:1289 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5J7L_165 HL_41998.2 | |
HL_8E30_033 | 1/I/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.2 | |
HL_8E30_034 | 1/I/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.3 | |
HL_8E30_035 | 1/I/1389:1398 | No text annotation Not in a motif group | homologous HL_5J7L_168 HL_69023.3 | |
HL_8E30_036 | 1/I/1451:1459 | No text annotation Not in a motif group | geometric HL_4V88_192 HL_69858.1 | |
HL_8E30_037 | 1/I/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.2 | |
HL_8E30_038 | 1/I/1533:1538 | UNCG Not in a motif group | homologous HL_5J7L_171 HL_29960.1 | |
HL_8E30_039 | 1/I/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.6 | |
HL_8E30_040 | 1/I/1612:1619 | No text annotation Not in a motif group | ||
HL_8E30_041 | 1/I/1630:1636 | GNRA with one bulged base Not in a motif group | homologous HL_5J7L_174 HL_85603.1 | |
HL_8E30_042 | 1/I/1691:1696 | No text annotation Not in a motif group | geometric HL_7RQB_042 NA | |
HL_8E30_043 | 1/I/1728:1731 | No text annotation Not in a motif group | ||
HL_8E30_044 | 1/I/1752:1756 | No text annotation Not in a motif group | homologous HL_5J7L_177 HL_76539.6 | |
HL_8E30_045 | 1/I/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.6 | |
HL_8E30_046 | 1/I/1806:1811 | No text annotation Not in a motif group | homologous HL_5J7L_179 HL_85603.1 | |
HL_8E30_047 | 1/I/1868:1873 | GNRA Not in a motif group | geometric HL_6CZR_078 HL_85603.1 | |
HL_8E30_048 | 1/I/1909:1921 | No text annotation Not in a motif group | ||
HL_8E30_049 | 1/I/1949:1957 | No text annotation Not in a motif group | homologous HL_5J7L_182 HL_51824.2 | |
HL_8E30_050 | 1/I/2027:2036 | No text annotation Not in a motif group | homologous HL_4WF9_047 HL_90642.7 | |
HL_8E30_051 | 1/I/2103:2186 | No text annotation Not in a motif group | ||
HL_8E30_052 | 1/I/2209:2215 | No text annotation Not in a motif group | homologous HL_5J7L_185 HL_16845.7 | |
HL_8E30_053 | 1/I/2248:2256 | No text annotation Not in a motif group | homologous HL_5J7L_186 NA | |
HL_8E30_054 | 1/I/2264:2276 | No text annotation Not in a motif group | homologous HL_5J7L_187 HL_19870.7 | |
HL_8E30_055 | 1/I/2303:2313 | No text annotation Not in a motif group | homologous HL_7RQB_055 NA | |
HL_8E30_056 | 1/I/2324:2331 | No text annotation Not in a motif group | homologous HL_5J7L_189 HL_12078.5 | |
HL_8E30_057 | 1/I/2356:2361 | Other HL Not in a motif group | homologous HL_5J7L_190 HL_87030.3 | |
HL_8E30_058 | 1/I/2374:2379 | GNRA Not in a motif group | homologous HL_5J7L_191 HL_85603.1 | |
HL_8E30_059 | 1/I/2404:2413 | No text annotation Not in a motif group | homologous HL_5J7L_192 HL_40210.3 | |
HL_8E30_060 | 1/I/2471:2479 | No text annotation Not in a motif group | homologous HL_4WF9_056 HL_06192.3 | |
HL_8E30_061 | 1/I/2528:2535 | No text annotation Not in a motif group | homologous HL_5J7L_194 HL_91104.2 | |
HL_8E30_062 | 1/I/2551:2557 | No text annotation Not in a motif group | homologous HL_5J7L_195 NA | |
HL_8E30_063 | 1/I/2594:2599 | GNRA Not in a motif group | homologous HL_5J7L_196 HL_85603.1 | |
HL_8E30_064 | 1/I/2658:2663 | GNRA Not in a motif group | homologous HL_5J7L_197 HL_85603.1 | |
HL_8E30_065 | 1/I/2701:2706 | Ribsomal LSU H95 Not in a motif group | homologous HL_5J7L_198 HL_46680.2 | |
HL_8E30_066 | 1/I/2745:2759 | No text annotation Not in a motif group | homologous HL_5J7L_199 HL_56677.8 | |
HL_8E30_067 | 1/I/2795:2801 | Other HL Not in a motif group | homologous HL_5J7L_200 HL_34168.3 | |
HL_8E30_068 | 1/I/2819:2827 | No text annotation Not in a motif group | homologous HL_5J7L_201 HL_64690.2 | |
HL_8E30_069 | 1/I/2856:2861 | Other HL Not in a motif group | homologous HL_5J7L_202 HL_85603.1 | |
HL_8E30_070 | 1/J/38:44 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_83767.1 | |
HL_8E30_071 | 1/J/86:90 | No text annotation Not in a motif group | homologous HL_5J7L_204 HL_38927.6 |
Problematic loops
No problematic loops
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
IL_8E30_001 | 1/I/24:30, 1/I/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5J7L_245 IL_66414.7 | |
IL_8E30_002 | 1/I/36:37, 1/I/442:444 | Single bulged A Not in a motif group | homologous IL_7RQB_002 NA | |
IL_8E30_003 | 1/I/43:44, 1/I/434:436 | Minor groove platform Not in a motif group | homologous IL_7RQB_003 NA | |
IL_8E30_004 | 1/I/81:85, 1/I/97:105 | No text annotation Not in a motif group | homologous IL_5J7L_248 IL_93699.1 | |
IL_8E30_005 | 1/I/183:184, 1/I/212:214 | Single stack bend Not in a motif group | homologous IL_5J7L_249 IL_76488.5 | |
IL_8E30_006 | 1/I/188:194, 1/I/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5J7L_250 IL_04346.8 | |
IL_8E30_007 | 1/I/239:245, 1/I/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_251 IL_76042.3 | |
IL_8E30_008 | 1/I/269:271, 1/I/366:370 | No text annotation Not in a motif group | homologous IL_5J7L_252 IL_47972.1 | |
IL_8E30_009 | 1/I/274:281, 1/I/359:363 | No text annotation Not in a motif group | homologous IL_5J7L_253 IL_77870.1 | |
IL_8E30_010 | 1/I/293:295, 1/I/343:347 | No text annotation Not in a motif group | homologous IL_5J7L_254 IL_69440.2 | |
IL_8E30_011 | 1/I/481:484, 1/I/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.7 | |
IL_8E30_012 | 1/I/536:539, 1/I/554:557 | Double sheared Not in a motif group | homologous IL_5J7L_256 IL_09705.11 | |
IL_8E30_013 | 1/I/564:566, 1/I/575:577 | No text annotation Not in a motif group | geometric IL_5J7L_257 IL_86319.3 | |
IL_8E30_014 | 1/I/606:610, 1/I/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_5J7L_258 IL_17136.2 | |
IL_8E30_015 | 1/I/672:674, 1/I/806:808 | No text annotation Not in a motif group | homologous IL_7RQB_017 NA | |
IL_8E30_016 | 1/I/674:678, 1/I/799:806 | tHW-tHW cross-strand stack Not in a motif group | geometric IL_5J7L_260 IL_17470.7 | |
IL_8E30_017 | 1/I/697:698, 1/I/763:765 | Single bulged A Not in a motif group | geometric IL_5J7L_261 IL_37497.7 | |
IL_8E30_018 | 1/I/702:703, 1/I/728:730 | Single bulged G Not in a motif group | homologous IL_5J7L_262 IL_00225.4 | |
IL_8E30_019 | 1/I/703:707, 1/I/724:728 | Triple sheared Not in a motif group | geometric IL_4V9F_027 IL_56467.9 | |
IL_8E30_020 | 1/I/710:712, 1/I/719:721 | No text annotation Not in a motif group | homologous IL_4WF9_025 NA | |
IL_8E30_021 | 1/I/738:740, 1/I/757:758 | Major groove platform Not in a motif group | homologous IL_5J7L_264 IL_27635.4 | |
IL_8E30_022 | 1/I/775:777, 1/I/787:791 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_265 IL_90991.7 | |
IL_8E30_023 | 1/I/837:838, 1/I/940:942 | Single stack bend Not in a motif group | homologous IL_5J7L_266 IL_92001.2 | |
IL_8E30_024 | 1/I/844:847, 1/I/933:934 | Other IL Not in a motif group | geometric IL_5J7L_267 IL_92001.2 | |
IL_8E30_025 | 1/I/847:848, 1/I/930:933 | Stack outside cWW Not in a motif group | homologous IL_5J7L_268 IL_37629.1 | |
IL_8E30_026 | 1/I/850:851, 1/I/926:928 | Single stack bend Not in a motif group | homologous IL_5J7L_269 IL_76488.5 | |
IL_8E30_027 | 1/I/856:862, 1/I/915:921 | 7x7 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_5J7L_270 IL_93830.3 | |
IL_8E30_028 | 1/I/862:863, 1/I/913:915 | Single bulged G Not in a motif group | homologous IL_5J7L_271 IL_00225.4 | |
IL_8E30_029 | 1/I/864:868, 1/I/909:912 | C-loop Not in a motif group | homologous IL_5J7L_272 IL_63596.7 | |
IL_8E30_030 | 1/I/870:872, 1/I/905:907 | No text annotation Not in a motif group | homologous IL_5J7L_273 IL_86319.3 | |
IL_8E30_031 | 1/I/875:879, 1/I/898:902 | Triple sheared Not in a motif group | homologous IL_5J7L_274 IL_56467.9 | |
IL_8E30_032 | 1/I/994:996, 1/I/1159:1160 | Single bulged C Not in a motif group | homologous IL_5J7L_276 IL_61258.13 | |
IL_8E30_033 | 1/I/998:1002, 1/I/1153:1157 | UAA/GAN Not in a motif group | homologous IL_4WF9_036 IL_89002.3 | |
IL_8E30_034 | 1/I/1004:1011, 1/I/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5J7L_278 IL_15861.8 | |
IL_8E30_035 | 1/I/1011:1013, 1/I/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.17 | |
IL_8E30_036 | 1/I/1018:1024, 1/I/1140:1144 | No text annotation Not in a motif group | homologous IL_5J7L_280 IL_57188.4 | |
IL_8E30_037 | 1/I/1024:1030, 1/I/1124:1140 | No text annotation Not in a motif group | geometric IL_5J7L_281 IL_50715.2 | |
IL_8E30_038 | 1/I/1031:1034, 1/I/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_43275.2 | |
IL_8E30_039 | 1/I/1038:1041, 1/I/1114:1117 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_283 IL_30621.4 | |
IL_8E30_040 | 1/I/1043:1051, 1/I/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.5 | |
IL_8E30_041 | 1/I/1054:1056, 1/I/1104:1105 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_76488.5 | |
IL_8E30_042 | 1/I/1196:1198, 1/I/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_5J7L_286 IL_52767.5 | |
IL_8E30_043 | 1/I/1202:1206, 1/I/1240:1243 | No text annotation Not in a motif group | homologous IL_5J7L_287 IL_91920.1 | |
IL_8E30_044 | 1/I/1208:1215, 1/I/1234:1238 | Kink-turn Not in a motif group | homologous IL_5J7L_288 IL_70923.3 | |
IL_8E30_045 | 1/I/1262:1269, 1/I/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_289 IL_04346.8 | |
IL_8E30_046 | 1/I/1310:1313, 1/I/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 NA | |
IL_8E30_047 | 1/I/1319:1323, 1/I/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.7 | |
IL_8E30_048 | 1/I/1351:1355, 1/I/1376:1380 | UAA/GAN Not in a motif group | homologous IL_5J7L_292 IL_89002.3 | |
IL_8E30_049 | 1/I/1357:1361, 1/I/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_293 IL_17136.2 | |
IL_8E30_050 | 1/I/1415:1416, 1/I/1582:1587 | No text annotation Not in a motif group | homologous IL_5J7L_294 IL_90348.1 | |
IL_8E30_051 | 1/I/1417:1421, 1/I/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.3 | |
IL_8E30_052 | 1/I/1432:1435, 1/I/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
IL_8E30_053 | 1/I/1437:1440, 1/I/1551:1555 | tSH-tHW Not in a motif group | homologous IL_5J7L_297 IL_04059.2 | |
IL_8E30_054 | 1/I/1450:1451, 1/I/1459:1461 | Single bulged U Not in a motif group | homologous IL_5J7L_298 IL_83039.17 | |
IL_8E30_055 | 1/I/1468:1471, 1/I/1520:1524 | No text annotation Not in a motif group | homologous IL_5J7L_299 IL_68574.3 | |
IL_8E30_056 | 1/I/1474:1479, 1/I/1512:1517 | No text annotation Not in a motif group | ||
IL_8E30_057 | 1/I/1481:1482, 1/I/1507:1510 | No text annotation Not in a motif group | homologous IL_5J7L_301 IL_67474.5 | |
IL_8E30_058 | 1/I/1489:1491, 1/I/1499:1500 | Single bulged A Not in a motif group | homologous IL_5J7L_302 IL_37497.7 | |
IL_8E30_059 | 1/I/1526:1529, 1/I/1542:1546 | UAA/GAN variation Not in a motif group | homologous IL_5J7L_303 IL_07235.2 | |
IL_8E30_061 | 1/I/1651:1656, 1/I/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.3 | |
IL_8E30_062 | 1/I/1663:1665, 1/I/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_5J7L_305 IL_54997.8 | |
IL_8E30_063 | 1/I/1666:1669, 1/I/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5J7L_306 IL_50694.3 | |
IL_8E30_064 | 1/I/1669:1674, 1/I/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_5J7L_307 IL_76273.2 | |
IL_8E30_065 | 1/I/1686:1691, 1/I/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5J7L_308 IL_65969.3 | |
IL_8E30_066 | 1/I/1712:1718, 1/I/1742:1746 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5J7L_309 IL_88269.3 | |
IL_8E30_067 | 1/I/1720:1724, 1/I/1736:1740 | Triple sheared Not in a motif group | homologous IL_5J7L_310 IL_96141.2 | |
IL_8E30_068 | 1/I/1727:1728, 1/I/1731:1733 | Single bulged C Not in a motif group | homologous IL_5J7L_311 IL_61258.13 | |
IL_8E30_069 | 1/I/1770:1771, 1/I/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.7 | |
IL_8E30_070 | 1/I/1798:1804, 1/I/1813:1821 | Kink-turn related Not in a motif group | homologous IL_5J7L_313 IL_17069.4 | |
IL_8E30_071 | 1/I/1837:1840, 1/I/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_314 IL_88739.4 | |
IL_8E30_072 | 1/I/1841:1842, 1/I/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.3 | |
IL_8E30_073 | 1/I/1846:1849, 1/I/1893:1894 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_316 IL_09061.9 | |
IL_8E30_074 | 1/I/1864:1867, 1/I/1874:1878 | UAA/GAN related Not in a motif group | homologous IL_5J7L_317 IL_77691.2 | |
IL_8E30_075 | 1/I/1933:1934, 1/I/1964:1967 | Multiple bulged bases Not in a motif group | geometric IL_5J7L_318 IL_59677.3 | |
IL_8E30_076 | 1/I/1934:1945, 1/I/1961:1964 | No text annotation Not in a motif group | homologous IL_7A0S_072 IL_81589.2 | |
IL_8E30_077 | 1/I/2050:2052, 1/I/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.4 | |
IL_8E30_078 | 1/I/2054:2056, 1/I/2612:2615 | No text annotation Not in a motif group | homologous IL_5J7L_321 IL_54678.5 | |
IL_8E30_079 | 1/I/2064:2066, 1/I/2444:2446 | No text annotation Not in a motif group | homologous IL_5J7L_322 NA | |
IL_8E30_080 | 1/I/2067:2070, 1/I/2441:2443 | No text annotation Not in a motif group | geometric IL_5C5W_002 IL_86319.3 | |
IL_8E30_081 | 1/I/2070:2071, 1/I/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 NA | |
IL_8E30_082 | 1/I/2081:2083, 1/I/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_5J7L_325 IL_38958.8 | |
IL_8E30_083 | 1/I/2085:2087, 1/I/2232:2234 | No text annotation Not in a motif group | homologous IL_5J7L_326 IL_86319.3 | |
IL_8E30_084 | 1/I/2101:2103, 1/I/2186:2188 | No text annotation Not in a motif group | geometric IL_3ICQ_003 IL_70707.3 | |
IL_8E30_085 | 1/I/2202:2204, 1/I/2220:2221 | Single bulged U Not in a motif group | homologous IL_5J7L_331 IL_83039.17 | |
IL_8E30_086 | 1/I/2350:2353, 1/I/2364:2367 | Double sheared Not in a motif group | homologous IL_5J7L_333 IL_09705.11 | |
IL_8E30_087 | 1/I/2401:2403, 1/I/2414:2415 | No text annotation Not in a motif group | ||
IL_8E30_088 | 1/I/2453:2455, 1/I/2496:2500 | No text annotation Not in a motif group | homologous IL_5J7L_335 NA | |
IL_8E30_089 | 1/I/2456:2459, 1/I/2493:2495 | No text annotation Not in a motif group | homologous IL_5J7L_336 NA | |
IL_8E30_090 | 1/I/2459:2461, 1/I/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | geometric IL_7A0S_086 IL_92788.3 | |
IL_8E30_091 | 1/I/2466:2470, 1/I/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.9 | |
IL_8E30_092 | 1/I/2507:2509, 1/I/2579:2582 | No text annotation Not in a motif group | homologous IL_5J7L_339 NA | |
IL_8E30_093 | 1/I/2510:2512, 1/I/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_340 IL_90933.3 | |
IL_8E30_094 | 1/I/2512:2513, 1/I/2571:2574 | No text annotation Not in a motif group | homologous IL_5J7L_341 IL_71530.3 | |
IL_8E30_095 | 1/I/2522:2523, 1/I/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.4 | |
IL_8E30_096 | 1/I/2588:2590, 1/I/2604:2606 | No text annotation Not in a motif group | homologous IL_7RQB_100 NA | |
IL_8E30_097 | 1/I/2591:2592, 1/I/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.7 | |
IL_8E30_098 | 1/I/2636:2640, 1/I/2774:2782 | No text annotation Not in a motif group | homologous IL_5J7L_345 IL_04638.2 | |
IL_8E30_099 | 1/I/2652:2658, 1/I/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.2 | |
IL_8E30_100 | 1/I/2680:2684, 1/I/2725:2727 | C-loop Not in a motif group | homologous IL_5J7L_347 IL_63596.7 | |
IL_8E30_101 | 1/I/2687:2691, 1/I/2718:2722 | No text annotation Not in a motif group | homologous IL_5J7L_348 IL_08296.4 | |
IL_8E30_102 | 1/I/2695:2696, 1/I/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_349 IL_71530.3 | |
IL_8E30_103 | 1/I/2737:2742, 1/I/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_5J7L_350 IL_49767.6 | |
IL_8E30_104 | 1/I/2806:2811, 1/I/2889:2892 | No text annotation Not in a motif group | homologous IL_5J7L_351 IL_49460.2 | |
IL_8E30_105 | 1/I/2838:2839, 1/I/2878:2880 | Major groove intercalation Not in a motif group | homologous IL_5J7L_352 IL_16396.3 | |
IL_8E30_106 | 1/I/2843:2846, 1/I/2870:2874 | Multiple bulged bases with non-canonical cWW Not in a motif group | homologous IL_5J7L_353 IL_58764.4 | |
IL_8E30_107 | 1/I/2847:2852, 1/I/2865:2869 | No text annotation Not in a motif group | homologous IL_5J7L_354 IL_83162.6 | |
IL_8E30_108 | 1/J/17:19, 1/J/64:67 | Major groove platform with extra pair Not in a motif group | geometric IL_5TBW_091 IL_63450.3 | |
IL_8E30_109 | 1/J/23:28, 1/J/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
IL_8E30_110 | 1/J/30:31, 1/J/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_5J7L_357 IL_09061.9 | |
IL_8E30_111 | 1/J/34:38, 1/J/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_5J7L_358 IL_58103.7 | |
IL_8E30_112 | 1/J/71:79, 1/J/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.4 |
Problematic loops
# | loop id | Problem | Sequence |
---|---|---|---|
IL_8E30_060 | No text annotation |
Valid loops
3D | Loop id | Location | Annotation; motif group | Mapped info |
---|---|---|---|---|
J3_8E30_001 | 1/I/683:689, 1/I/773:775, 1/I/791:794 | No text annotation Not in a motif group | homologous J3_7RQB_004 NA | |
J3_8E30_002 | 1/I/698:700, 1/I/732:736, 1/I/760:763 | No text annotation Not in a motif group | homologous J3_5J7L_039 NA | |
J3_8E30_003 | 1/I/1056:1063, 1/I/1075:1091, 1/I/1100:1104 | No text annotation Not in a motif group | ||
J3_8E30_004 | 1/I/1298:1303, 1/I/1625:1627, 1/I/1639:1642 | No text annotation Not in a motif group | homologous J3_5J7L_041 NA | |
J3_8E30_005 | 1/I/1306:1309, 1/I/1605:1611, 1/I/1620:1622 | No text annotation Not in a motif group | homologous J3_7A0S_007 NA | |
J3_8E30_006 | 1/I/2091:2093, 1/I/2196:2200, 1/I/2223:2228 | No text annotation Not in a motif group | homologous J3_5J7L_044 NA | |
J3_8E30_007 | 1/I/2295:2299, 1/I/2317:2323, 1/I/2332:2337 | No text annotation Not in a motif group | ||
J3_8E30_008 | 1/I/2517:2520, 1/I/2545:2547, 1/I/2561:2567 | No text annotation Not in a motif group | homologous J3_5J7L_046 NA | |
J3_8E30_009 | 1/I/2812:2815, 1/I/2831:2836, 1/I/2882:2888 | No text annotation Not in a motif group | homologous J3_5J7L_048 NA | |
J3_8E30_010 | 1/J/10:16, 1/J/68:70, 1/J/106:110 | No text annotation Not in a motif group | homologous J3_5J7L_049 NA |
Problematic loops
No problematic loops
Coloring options: