Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8E30_0011/I/59:68No text annotation
Not in a motif group
homologous
HL_5J7L_134
HL_18177.1
HL_8E30_0021/I/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_84193.1
HL_8E30_0031/I/123:128No text annotation
Not in a motif group
homologous
HL_5J7L_136
HL_75407.1
HL_8E30_0041/I/137:142UNCG
Not in a motif group
geometric
HL_4PMI_004
HL_03562.2
HL_8E30_0051/I/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_8E30_0061/I/194:201No text annotation
Not in a motif group
homologous
HL_5J7L_139
HL_06192.2
HL_8E30_0071/I/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_27930.1
HL_8E30_0081/I/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_8E30_0091/I/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_89380.2
HL_8E30_0101/I/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_8E30_0111/I/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.8
HL_8E30_0121/I/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_8E30_0131/I/410:417No text annotation
Not in a motif group
homologous
HL_5J7L_146
HL_96598.1
HL_8E30_0141/I/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.1
HL_8E30_0151/I/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.1
HL_8E30_0161/I/543:550No text annotation
Not in a motif group
HL_8E30_0171/I/566:575T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_150
HL_89380.2
HL_8E30_0181/I/611:617No text annotation
Not in a motif group
homologous
HL_5J7L_151
HL_90617.2
HL_8E30_0191/I/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.1
HL_8E30_0201/I/641:647No text annotation
Not in a motif group
homologous
HL_5J7L_153
HL_77805.2
HL_8E30_0211/I/712:719No text annotation
Not in a motif group
geometric
HL_5J7L_151
HL_90617.2
HL_8E30_0221/I/744:753No text annotation
Not in a motif group
homologous
HL_5J7L_155
NA
HL_8E30_0231/I/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_8E30_0241/I/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_8E30_0251/I/879:898No text annotation
Not in a motif group
HL_8E30_0261/I/954:963No text annotation
Not in a motif group
homologous
HL_5J7L_159
NA
HL_8E30_0271/I/978:985No text annotation
Not in a motif group
homologous
HL_5J7L_160
HL_64430.2
HL_8E30_0281/I/1063:1075No text annotation
Not in a motif group
HL_8E30_0291/I/1091:1100No text annotation
Not in a motif group
HL_8E30_0301/I/1168:1181No text annotation
Not in a motif group
HL_8E30_0311/I/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_8E30_0321/I/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_89380.2
HL_8E30_0331/I/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_8E30_0341/I/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_8E30_0351/I/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_8E30_0361/I/1451:1459No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_8E30_0371/I/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_8E30_0381/I/1533:1538UNCG
Not in a motif group
homologous
HL_5J7L_171
HL_03562.2
HL_8E30_0391/I/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_8E30_0401/I/1612:1619No text annotation
Not in a motif group
HL_8E30_0411/I/1630:1636GNRA with one bulged base
Not in a motif group
homologous
HL_5J7L_174
HL_42097.1
HL_8E30_0421/I/1691:1696No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_8E30_0431/I/1728:1731No text annotation
Not in a motif group
HL_8E30_0441/I/1752:1756No text annotation
Not in a motif group
homologous
HL_5J7L_177
HL_76539.2
HL_8E30_0451/I/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.5
HL_8E30_0461/I/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_42097.1
HL_8E30_0471/I/1868:1873GNRA
Not in a motif group
geometric
HL_6CZR_078
HL_42097.1
HL_8E30_0481/I/1909:1921No text annotation
Not in a motif group
HL_8E30_0491/I/1949:1957No text annotation
Not in a motif group
homologous
HL_5J7L_182
HL_51824.1
HL_8E30_0501/I/2027:2036No text annotation
Not in a motif group
homologous
HL_4WF9_047
HL_90642.6
HL_8E30_0511/I/2103:2186No text annotation
Not in a motif group
HL_8E30_0521/I/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_8E30_0531/I/2248:2256No text annotation
Not in a motif group
homologous
HL_5J7L_186
NA
HL_8E30_0541/I/2264:2276No text annotation
Not in a motif group
homologous
HL_5J7L_187
HL_19870.6
HL_8E30_0551/I/2303:2313No text annotation
Not in a motif group
homologous
HL_7RQB_055
HL_11805.3
HL_8E30_0561/I/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.2
HL_8E30_0571/I/2356:2361Other HL
Not in a motif group
homologous
HL_5J7L_190
HL_87030.2
HL_8E30_0581/I/2374:2379GNRA
Not in a motif group
homologous
HL_5J7L_191
HL_42097.1
HL_8E30_0591/I/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_30784.2
HL_8E30_0601/I/2471:2479No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_8E30_0611/I/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_88526.2
HL_8E30_0621/I/2551:2557No text annotation
Not in a motif group
homologous
HL_5J7L_195
NA
HL_8E30_0631/I/2594:2599GNRA
Not in a motif group
homologous
HL_5J7L_196
HL_42097.1
HL_8E30_0641/I/2658:2663GNRA
Not in a motif group
homologous
HL_5J7L_197
HL_42097.1
HL_8E30_0651/I/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_8E30_0661/I/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_8E30_0671/I/2795:2801Other HL
Not in a motif group
homologous
HL_5J7L_200
HL_34168.2
HL_8E30_0681/I/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_8E30_0691/I/2856:2861Other HL
Not in a motif group
homologous
HL_5J7L_202
HL_42097.1
HL_8E30_0701/J/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.1
HL_8E30_0711/J/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.2

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8E30_0011/I/24:30,
1/I/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_5J7L_245
IL_66414.6
IL_8E30_0021/I/36:37,
1/I/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_8E30_0031/I/43:44,
1/I/434:436
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.2
IL_8E30_0041/I/81:85,
1/I/97:105
No text annotation
Not in a motif group
homologous
IL_5J7L_248
IL_93699.1
IL_8E30_0051/I/183:184,
1/I/212:214
Single stack bend
Not in a motif group
homologous
IL_5J7L_249
IL_76488.2
IL_8E30_0061/I/188:194,
1/I/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_5J7L_250
IL_04346.7
IL_8E30_0071/I/239:245,
1/I/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_251
IL_76042.2
IL_8E30_0081/I/269:271,
1/I/366:370
No text annotation
Not in a motif group
homologous
IL_5J7L_252
IL_47972.1
IL_8E30_0091/I/274:281,
1/I/359:363
No text annotation
Not in a motif group
homologous
IL_5J7L_253
IL_77870.1
IL_8E30_0101/I/293:295,
1/I/343:347
No text annotation
Not in a motif group
homologous
IL_5J7L_254
IL_69440.1
IL_8E30_0111/I/481:484,
1/I/496:509
No text annotation
Not in a motif group
homologous
IL_5J7L_255
IL_60992.6
IL_8E30_0121/I/536:539,
1/I/554:557
Double sheared
Not in a motif group
homologous
IL_5J7L_256
IL_09705.9
IL_8E30_0131/I/564:566,
1/I/575:577
No text annotation
Not in a motif group
geometric
IL_5J7L_257
IL_95997.1
IL_8E30_0141/I/606:610,
1/I/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_5J7L_258
IL_17136.1
IL_8E30_0151/I/672:674,
1/I/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_95997.1
IL_8E30_0161/I/674:678,
1/I/799:806
tHW-tHW cross-strand stack
Not in a motif group
geometric
IL_5J7L_260
IL_17470.6
IL_8E30_0171/I/697:698,
1/I/763:765
Single bulged A
Not in a motif group
geometric
IL_5J7L_261
IL_37497.2
IL_8E30_0181/I/702:703,
1/I/728:730
Single bulged G
Not in a motif group
homologous
IL_5J7L_262
IL_00225.2
IL_8E30_0191/I/703:707,
1/I/724:728
Triple sheared
Not in a motif group
geometric
IL_4V9F_027
IL_56467.8
IL_8E30_0201/I/710:712,
1/I/719:721
No text annotation
Not in a motif group
homologous
IL_4WF9_025
NA
IL_8E30_0211/I/738:740,
1/I/757:758
Major groove platform
Not in a motif group
homologous
IL_5J7L_264
IL_27635.1
IL_8E30_0221/I/775:777,
1/I/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_265
IL_90991.6
IL_8E30_0231/I/837:838,
1/I/940:942
Single stack bend
Not in a motif group
homologous
IL_5J7L_266
IL_92001.1
IL_8E30_0241/I/844:847,
1/I/933:934
Other IL
Not in a motif group
geometric
IL_5J7L_267
IL_92001.1
IL_8E30_0251/I/847:848,
1/I/930:933
Stack outside cWW
Not in a motif group
homologous
IL_5J7L_268
IL_37629.1
IL_8E30_0261/I/850:851,
1/I/926:928
Single stack bend
Not in a motif group
homologous
IL_5J7L_269
IL_76488.2
IL_8E30_0271/I/856:862,
1/I/915:921
7x7 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_5J7L_270
IL_93830.3
IL_8E30_0281/I/862:863,
1/I/913:915
Single bulged G
Not in a motif group
homologous
IL_5J7L_271
IL_00225.2
IL_8E30_0291/I/864:868,
1/I/909:912
C-loop
Not in a motif group
homologous
IL_5J7L_272
IL_63596.6
IL_8E30_0301/I/870:872,
1/I/905:907
No text annotation
Not in a motif group
homologous
IL_5J7L_273
IL_95997.1
IL_8E30_0311/I/875:879,
1/I/898:902
Triple sheared
Not in a motif group
homologous
IL_5J7L_274
IL_56467.8
IL_8E30_0321/I/994:996,
1/I/1159:1160
Single bulged C
Not in a motif group
homologous
IL_5J7L_276
IL_61258.12
IL_8E30_0331/I/998:1002,
1/I/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_4WF9_036
IL_89002.2
IL_8E30_0341/I/1004:1011,
1/I/1150:1151
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5J7L_278
IL_15861.7
IL_8E30_0351/I/1011:1013,
1/I/1149:1150
Single bulged U
Not in a motif group
geometric
IL_5J7L_279
IL_83039.13
IL_8E30_0361/I/1018:1024,
1/I/1140:1144
No text annotation
Not in a motif group
homologous
IL_5J7L_280
IL_57188.3
IL_8E30_0371/I/1024:1030,
1/I/1124:1140
No text annotation
Not in a motif group
geometric
IL_5J7L_281
IL_50715.1
IL_8E30_0381/I/1031:1034,
1/I/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_282
IL_82068.2
IL_8E30_0391/I/1038:1041,
1/I/1114:1117
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_283
IL_30621.2
IL_8E30_0401/I/1043:1051,
1/I/1108:1112
Kink-turn
Not in a motif group
homologous
IL_5J7L_284
IL_90538.4
IL_8E30_0411/I/1054:1056,
1/I/1104:1105
Single stack bend
Not in a motif group
geometric
IL_7A0S_054
IL_76488.2
IL_8E30_0421/I/1196:1198,
1/I/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_5J7L_286
IL_52767.2
IL_8E30_0431/I/1202:1206,
1/I/1240:1243
No text annotation
Not in a motif group
homologous
IL_5J7L_287
IL_91920.1
IL_8E30_0441/I/1208:1215,
1/I/1234:1238
Kink-turn
Not in a motif group
homologous
IL_5J7L_288
IL_70923.2
IL_8E30_0451/I/1262:1269,
1/I/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_289
IL_04346.7
IL_8E30_0461/I/1310:1313,
1/I/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_8E30_0471/I/1319:1323,
1/I/1331:1333
C-loop
Not in a motif group
homologous
IL_5J7L_291
IL_63596.6
IL_8E30_0481/I/1351:1355,
1/I/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_5J7L_292
IL_89002.2
IL_8E30_0491/I/1357:1361,
1/I/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_293
IL_17136.1
IL_8E30_0501/I/1415:1416,
1/I/1582:1587
No text annotation
Not in a motif group
homologous
IL_5J7L_294
IL_90348.1
IL_8E30_0511/I/1417:1421,
1/I/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_5J7L_295
IL_89002.2
IL_8E30_0521/I/1432:1435,
1/I/1557:1561
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_296
IL_55178.1
IL_8E30_0531/I/1437:1440,
1/I/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_5J7L_297
IL_04059.1
IL_8E30_0541/I/1450:1451,
1/I/1459:1461
Single bulged U
Not in a motif group
homologous
IL_5J7L_298
IL_83039.13
IL_8E30_0551/I/1468:1471,
1/I/1520:1524
No text annotation
Not in a motif group
homologous
IL_5J7L_299
IL_68574.2
IL_8E30_0561/I/1474:1479,
1/I/1512:1517
No text annotation
Not in a motif group
IL_8E30_0571/I/1481:1482,
1/I/1507:1510
No text annotation
Not in a motif group
homologous
IL_5J7L_301
IL_67474.4
IL_8E30_0581/I/1489:1491,
1/I/1499:1500
Single bulged A
Not in a motif group
homologous
IL_5J7L_302
IL_37497.2
IL_8E30_0591/I/1526:1529,
1/I/1542:1546
UAA/GAN variation
Not in a motif group
homologous
IL_5J7L_303
IL_07235.1
IL_8E30_0611/I/1651:1656,
1/I/2004:2006
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_8E30_0621/I/1663:1665,
1/I/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_5J7L_305
IL_54997.7
IL_8E30_0631/I/1666:1669,
1/I/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_306
IL_50694.2
IL_8E30_0641/I/1669:1674,
1/I/1990:1993
Intercalated tWH
Not in a motif group
geometric
IL_5J7L_307
IL_82842.2
IL_8E30_0651/I/1686:1691,
1/I/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_5J7L_308
IL_65969.2
IL_8E30_0661/I/1712:1718,
1/I/1742:1746
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_309
IL_88269.3
IL_8E30_0671/I/1720:1724,
1/I/1736:1740
Triple sheared
Not in a motif group
homologous
IL_5J7L_310
IL_56467.8
IL_8E30_0681/I/1727:1728,
1/I/1731:1733
Single bulged C
Not in a motif group
homologous
IL_5J7L_311
IL_61258.12
IL_8E30_0691/I/1770:1771,
1/I/1980:1982
Single bulged A
Not in a motif group
homologous
IL_5J7L_312
IL_37497.2
IL_8E30_0701/I/1798:1804,
1/I/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_5J7L_313
IL_17069.3
IL_8E30_0711/I/1837:1840,
1/I/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_314
IL_88739.1
IL_8E30_0721/I/1841:1842,
1/I/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_315
IL_16396.2
IL_8E30_0731/I/1846:1849,
1/I/1893:1894
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_316
IL_09061.6
IL_8E30_0741/I/1864:1867,
1/I/1874:1878
UAA/GAN related
Not in a motif group
homologous
IL_5J7L_317
IL_77691.1
IL_8E30_0751/I/1933:1934,
1/I/1964:1967
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_318
IL_59677.2
IL_8E30_0761/I/1934:1945,
1/I/1961:1964
No text annotation
Not in a motif group
homologous
IL_7A0S_072
IL_81589.2
IL_8E30_0771/I/2050:2052,
1/I/2617:2618
Major groove platform
Not in a motif group
homologous
IL_5J7L_320
IL_27635.1
IL_8E30_0781/I/2054:2056,
1/I/2612:2615
No text annotation
Not in a motif group
homologous
IL_5J7L_321
IL_54678.5
IL_8E30_0791/I/2064:2066,
1/I/2444:2446
No text annotation
Not in a motif group
homologous
IL_5J7L_322
NA
IL_8E30_0801/I/2067:2070,
1/I/2441:2443
No text annotation
Not in a motif group
geometric
IL_5C5W_002
IL_95997.1
IL_8E30_0811/I/2070:2071,
1/I/2438:2441
Minor groove platform
Not in a motif group
homologous
IL_7RQB_081
IL_42622.2
IL_8E30_0821/I/2081:2083,
1/I/2236:2239
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5J7L_325
IL_38958.7
IL_8E30_0831/I/2085:2087,
1/I/2232:2234
No text annotation
Not in a motif group
homologous
IL_5J7L_326
IL_95997.1
IL_8E30_0841/I/2101:2103,
1/I/2186:2188
No text annotation
Not in a motif group
geometric
IL_3ICQ_003
IL_51629.2
IL_8E30_0851/I/2202:2204,
1/I/2220:2221
Single bulged U
Not in a motif group
homologous
IL_5J7L_331
IL_83039.13
IL_8E30_0861/I/2350:2353,
1/I/2364:2367
Double sheared
Not in a motif group
homologous
IL_5J7L_333
IL_09705.9
IL_8E30_0871/I/2401:2403,
1/I/2414:2415
No text annotation
Not in a motif group
IL_8E30_0881/I/2453:2455,
1/I/2496:2500
No text annotation
Not in a motif group
homologous
IL_5J7L_335
NA
IL_8E30_0891/I/2456:2459,
1/I/2493:2495
No text annotation
Not in a motif group
homologous
IL_5J7L_336
NA
IL_8E30_0901/I/2459:2461,
1/I/2489:2493
Major groove minor groove platform with extra cWW
Not in a motif group
geometric
IL_7A0S_086
IL_92788.2
IL_8E30_0911/I/2466:2470,
1/I/2480:2484
Triple sheared
Not in a motif group
homologous
IL_5J7L_338
IL_56467.8
IL_8E30_0921/I/2507:2509,
1/I/2579:2582
No text annotation
Not in a motif group
homologous
IL_5J7L_339
NA
IL_8E30_0931/I/2510:2512,
1/I/2574:2578
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5J7L_340
IL_90933.2
IL_8E30_0941/I/2512:2513,
1/I/2571:2574
No text annotation
Not in a motif group
homologous
IL_5J7L_341
IL_71530.2
IL_8E30_0951/I/2522:2523,
1/I/2540:2543
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5J7L_342
IL_95601.3
IL_8E30_0961/I/2588:2590,
1/I/2604:2606
No text annotation
Not in a motif group
homologous
IL_7RQB_100
NA
IL_8E30_0971/I/2591:2592,
1/I/2601:2603
Single bulged A
Not in a motif group
homologous
IL_5J7L_344
IL_37497.2
IL_8E30_0981/I/2636:2640,
1/I/2774:2782
No text annotation
Not in a motif group
homologous
IL_5J7L_345
IL_04638.1
IL_8E30_0991/I/2652:2658,
1/I/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
Not in a motif group
geometric
IL_5J7L_346
IL_16458.1
IL_8E30_1001/I/2680:2684,
1/I/2725:2727
C-loop
Not in a motif group
homologous
IL_5J7L_347
IL_63596.6
IL_8E30_1011/I/2687:2691,
1/I/2718:2722
No text annotation
Not in a motif group
homologous
IL_5J7L_348
IL_08296.3
IL_8E30_1021/I/2695:2696,
1/I/2711:2714
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_349
IL_71530.2
IL_8E30_1031/I/2737:2742,
1/I/2762:2767
UAA/GAN with extra cWW
Not in a motif group
homologous
IL_5J7L_350
IL_49767.5
IL_8E30_1041/I/2806:2811,
1/I/2889:2892
No text annotation
Not in a motif group
homologous
IL_5J7L_351
IL_49460.2
IL_8E30_1051/I/2838:2839,
1/I/2878:2880
Major groove intercalation
Not in a motif group
homologous
IL_5J7L_352
IL_16396.2
IL_8E30_1061/I/2843:2846,
1/I/2870:2874
Multiple bulged bases with non-canonical cWW
Not in a motif group
homologous
IL_5J7L_353
IL_58764.3
IL_8E30_1071/I/2847:2852,
1/I/2865:2869
No text annotation
Not in a motif group
homologous
IL_5J7L_354
IL_83162.5
IL_8E30_1081/J/17:19,
1/J/64:67
Major groove platform with extra pair
Not in a motif group
geometric
IL_5TBW_091
IL_63450.2
IL_8E30_1091/J/23:28,
1/J/56:60
No text annotation
Not in a motif group
homologous
IL_5J7L_356
IL_18472.2
IL_8E30_1101/J/30:31,
1/J/51:54
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_5J7L_357
IL_09061.6
IL_8E30_1111/J/34:38,
1/J/44:48
Symmetric double minor groove platform
Not in a motif group
geometric
IL_5J7L_358
IL_58103.6
IL_8E30_1121/J/71:79,
1/J/97:105
Bacterial 5S Loop E
Not in a motif group
homologous
IL_5J7L_359
IL_56455.3

Problematic loops

#loop idProblemSequence
IL_8E30_060No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8E30_0011/I/683:689,
1/I/773:775,
1/I/791:794
No text annotation
Not in a motif group
homologous
J3_7RQB_004
NA
J3_8E30_0021/I/698:700,
1/I/732:736,
1/I/760:763
No text annotation
Not in a motif group
homologous
J3_5J7L_039
NA
J3_8E30_0031/I/1056:1063,
1/I/1075:1091,
1/I/1100:1104
No text annotation
Not in a motif group
J3_8E30_0041/I/1298:1303,
1/I/1625:1627,
1/I/1639:1642
No text annotation
Not in a motif group
homologous
J3_5J7L_041
NA
J3_8E30_0051/I/1306:1309,
1/I/1605:1611,
1/I/1620:1622
No text annotation
Not in a motif group
homologous
J3_7A0S_007
NA
J3_8E30_0061/I/2091:2093,
1/I/2196:2200,
1/I/2223:2228
No text annotation
Not in a motif group
homologous
J3_5J7L_044
NA
J3_8E30_0071/I/2295:2299,
1/I/2317:2323,
1/I/2332:2337
No text annotation
Not in a motif group
J3_8E30_0081/I/2517:2520,
1/I/2545:2547,
1/I/2561:2567
No text annotation
Not in a motif group
homologous
J3_5J7L_046
NA
J3_8E30_0091/I/2812:2815,
1/I/2831:2836,
1/I/2882:2888
No text annotation
Not in a motif group
homologous
J3_5J7L_048
NA
J3_8E30_0101/J/10:16,
1/J/68:70,
1/J/106:110
No text annotation
Not in a motif group
homologous
J3_5J7L_049
NA

Problematic loops

No problematic loops


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