4GKK Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/12:22 | NA | NA | ||
| 1/A/78:84 | NA | NA | ||
| 1/A/152:157 | NA | NA | ||
| 1/A/186:191 | NA | NA | ||
| 1/A/207:211 | NA | NA | ||
| 1/A/254:262 | NA | NA | ||
| 1/A/291:296 | NA | NA | ||
| 1/A/315:328 | NA | NA | ||
| 1/A/337:342 | NA | NA | ||
| 1/A/374:379 | NA | NA | ||
| 1/A/414:419 | NA | NA | ||
| 1/A/452:458 | NA | NA | ||
| 1/A/505:510 | NA | NA | ||
| 1/A/600:606 | NA | NA | ||
| 1/A/672:681 | NA | NA | ||
| 1/A/709:714 | NA | NA | ||
| 1/A/769:779 | NA | NA | ||
| 1/A/821:825 | NA | NA | ||
| 1/A/839:844 | NA | NA | ||
| 1/A/874:879 | NA | NA | ||
| 1/A/940:949 | NA | NA | ||
| 1/A/990:995 | NA | NA | ||
| 1/A/1008:1013 | NA | NA | ||
| 1/A/1058:1063 | NA | NA | ||
| 1/A/1071:1078 | NA | NA | ||
| 1/A/1116:1122 | NA | NA | ||
| 1/A/1147:1152 | NA | NA | ||
| 1/A/1246:1251 | NA | NA | ||
| 1/A/1295:1304 | NA | NA | ||
| 1/A/1337:1348 | NA | NA | ||
| 1/A/1429:1434 | NA | NA | ||
| 1/A/1492:1497 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/30:32, 1/A/535:536 | NA | NA | ||
| 1/A/44:45, 1/A/391:393 | NA | NA | ||
| 1/A/47:52, 1/A/354:356 | NA | NA | ||
| 1/A/54:56, 1/A/351:352 | NA | NA | ||
| 1/A/63:66, 1/A/96:97 | NA | NA | ||
| 1/A/67:69, 1/A/93:95 | NA | NA | ||
| 1/A/122:125, 1/A/226:227 | NA | NA | ||
| 1/A/126:130, 1/A/222:225 | NA | NA | ||
| 1/A/142:147, 1/A/162:168 | NA | NA | ||
| 1/A/180:182, 1/A/195:197 | NA | NA | ||
| 1/A/237:242, 1/A/272:279 | NA | NA | ||
| 1/A/244:247, 1/A/269:270 | NA | NA | ||
| 1/A/287:288, 1/A/299:303 | NA | NA | ||
| 1/A/362:364, 1/A/387:388 | NA | NA | ||
| 1/A/366:370, 1/A/384:385 | NA | NA | ||
| 1/A/370:371, 1/A/382:384 | NA | NA | ||
| 1/A/403:411, 1/A/422:429 | NA | NA | ||
| 1/A/440:444, 1/A/467:472 | NA | NA | ||
| 1/A/444:449, 1/A/461:467 | NA | NA | ||
| 1/A/487:494, 1/A/523:524 | NA | NA | ||
| 1/A/498:504, 1/A/511:519 | NA | NA | ||
| 1/A/552:558, 1/A/857:858 | NA | NA | ||
| 1/A/563:567, 1/A/740:744 | NA | NA | ||
| 1/A/577:579, 1/A/627:628 | NA | NA | ||
| 1/A/580:581, 1/A/623:626 | NA | NA | ||
| 1/A/588:595, 1/A/611:616 | NA | NA | ||
| 1/A/637:638, 1/A/734:737 | NA | NA | ||
| 1/A/640:641, 1/A/730:732 | NA | NA | ||
| 1/A/645:649, 1/A/723:726 | NA | NA | ||
| 1/A/656:661, 1/A/695:700 | NA | NA | ||
| 1/A/666:671, 1/A/682:690 | NA | NA | ||
| 1/A/757:761, 1/A/787:788 | NA | NA | ||
| 1/A/762:766, 1/A/782:786 | NA | NA | ||
| 1/A/864:871, 1/A/882:887 | NA | NA | ||
| 1/A/899:900, 1/A/1375:1377 | NA | NA | ||
| 1/A/902:904, 1/A/1372:1373 | NA | NA | ||
| 1/A/910:912, 1/A/1362:1366 | NA | NA | ||
| 1/A/930:931, 1/A/1207:1209 | NA | NA | ||
| 1/A/970:974, 1/A/1026:1027 | NA | NA | ||
| 1/A/1030:1032, 1/A/1189:1190 | NA | NA | ||
| 1/A/1034:1038, 1/A/1185:1187 | NA | NA | ||
| 1/A/1039:1040, 1/A/1180:1184 | NA | NA | ||
| 1/A/1042:1043, 1/A/1176:1178 | NA | NA | ||
| 1/A/1043:1045, 1/A/1174:1176 | NA | NA | ||
| 1/A/1106:1115, 1/A/1123:1131 | NA | NA | ||
| 1/A/1140:1143, 1/A/1156:1162 | NA | NA | ||
| 1/A/1228:1234, 1/A/1265:1271 | NA | NA | ||
| 1/A/1236:1239, 1/A/1258:1263 | NA | NA | ||
| 1/A/1240:1241, 1/A/1255:1257 | NA | NA | ||
| 1/A/1241:1243, 1/A/1254:1255 | NA | NA | ||
| 1/A/1284:1289, 1/A/1310:1315 | NA | NA | ||
| 1/A/1381:1383, 1/A/1478:1481 | NA | NA | ||
| 1/A/1383:1386, 1/A/1474:1478 | NA | NA | ||
| 1/A/1387:1389, 1/A/1471:1473 | NA | NA | ||
| 1/A/1389:1391, 1/A/1468:1471 | NA | NA | ||
| 1/A/1394:1396, 1/A/1463:1465 | NA | NA | ||
| 1/A/1398:1401, 1/A/1458:1461 | NA | NA | ||
| 1/A/1406:1408, 1/A/1451:1453 | NA | NA | ||
| 1/A/1413:1417, 1/A/1443:1446 | NA | NA | ||
| 1/A/1417:1419, 1/A/1441:1443 | NA | NA | ||
| 1/A/1422:1427, 1/A/1436:1438 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4GKK_040 | NA | ||
| IL_4GKK_046 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/809:812, 1/A/834:838, 1/A/845:851 | NA | NA | ||
| 1/A/913:916, 1/A/1325:1331, 1/A/1354:1361 | NA | NA | ||
| 1/A/920:923, 1/A/1216:1218, 1/A/1318:1321 | NA | NA | ||
| 1/A/932:939, 1/A/950:961, 1/A/1202:1206 | NA | NA | ||
| 1/A/967:970, 1/A/1027:1029, 1/A/1191:1196 | NA | NA | ||
| 1/A/1045:1050, 1/A/1089:1095, 1/A/1168:1174 | NA | NA | ||
| 1/A/1098:1100, 1/A/1137:1140, 1/A/1162:1165 | NA | NA | ||
| 1/A/1218:1222, 1/A/1277:1284, 1/A/1315:1318 | NA | NA |
Problematic loops
No problematic loops
Coloring options: