6S13 | Motifs

101 Hairpin loops
162 Internal loops
22 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_6S13_001 ➜	1/A/59:68	NA	NA
2	HL_6S13_002 ➜	1/A/85:97	NA	NA
3	HL_6S13_003 ➜	1/A/122:127	NA	NA
4	HL_6S13_004 ➜	1/A/136:143	NA	NA
5	HL_6S13_005 ➜	1/A/157:171	NA	NA
6	HL_6S13_006 ➜	1/A/197:204	NA	NA
7	HL_6S13_007 ➜	1/A/249:255	NA	NA
8	HL_6S13_008 ➜	1/A/283:288	NA	NA
9	HL_6S13_009 ➜	1/A/348:355	NA	NA
10	HL_6S13_010 ➜	1/A/362:366	NA	NA
11	HL_6S13_011 ➜	1/A/370:378	NA	NA
12	HL_6S13_012 ➜	1/A/426:440	NA	NA
13	HL_6S13_013 ➜	1/A/456:463	NA	NA
14	HL_6S13_014 ➜	1/A/508:513	NA	NA
15	HL_6S13_015 ➜	1/A/533:538	NA	NA
16	HL_6S13_016 ➜	1/A/587:594	NA	NA
17	HL_6S13_017 ➜	1/A/609:618	NA	NA
18	HL_6S13_018 ➜	1/A/655:661	NA	NA
19	HL_6S13_019 ➜	1/A/674:679	NA	NA
20	HL_6S13_020 ➜	1/A/685:693	NA	NA
21	HL_6S13_021 ➜	1/A/758:762	NA	NA
22	HL_6S13_022 ➜	1/A/789:798	NA	NA
23	HL_6S13_023 ➜	1/A/824:830	NA	NA
24	HL_6S13_024 ➜	1/A/871:876	NA	NA
25	HL_6S13_025 ➜	1/A/925:942	NA	NA
26	HL_6S13_026 ➜	1/A/999:1006	NA	NA
27	HL_6S13_027 ➜	1/A/1022:1029	NA	NA
28	HL_6S13_028 ➜	1/A/1103:1123	NA	NA
29	HL_6S13_029 ➜	1/A/1214:1218	NA	NA
30	HL_6S13_030 ➜	1/A/1260:1265	NA	NA
31	HL_6S13_031 ➜	1/A/1318:1326	NA	NA
32	HL_6S13_032 ➜	1/A/1361:1367	NA	NA
33	HL_6S13_033 ➜	1/A/1400:1405	NA	NA
34	HL_6S13_034 ➜	1/A/1426:1435	NA	NA
35	HL_6S13_035 ➜	1/A/1494:1506	NA	NA
36	HL_6S13_036 ➜	1/A/1535:1541	NA	NA
37	HL_6S13_037 ➜	1/A/1612:1615	NA	NA
38	HL_6S13_038 ➜	1/A/1656:1663	NA	NA
39	HL_6S13_039 ➜	1/A/1673:1681	NA	NA
40	HL_6S13_040 ➜	1/A/1735:1740	NA	NA
41	HL_6S13_041 ➜	1/A/1760:1769	NA	NA
42	HL_6S13_042 ➜	1/A/1779:1783	NA	NA
43	HL_6S13_043 ➜	1/A/1803:1815	NA	NA
44	HL_6S13_044 ➜	1/A/1833:1838	NA	NA
45	HL_6S13_045 ➜	1/A/1888:1908	NA	NA
46	HL_6S13_046 ➜	1/A/1937:1947	NA	NA
47	HL_6S13_047 ➜	1/A/1976:1984	NA	NA
48	HL_6S13_048 ➜	1/A/2054:2063	NA	NA
49	HL_6S13_049 ➜	1/A/2169:2176	NA	NA
50	HL_6S13_050 ➜	1/A/2236:2242	NA	NA
51	HL_6S13_051 ➜	1/A/2275:2283	NA	NA
52	HL_6S13_052 ➜	1/A/2291:2303	NA	NA
53	HL_6S13_054 ➜	1/A/2350:2359	NA	NA
54	HL_6S13_055 ➜	1/A/2382:2389	NA	NA
55	HL_6S13_056 ➜	1/A/2401:2406	NA	NA
56	HL_6S13_057 ➜	1/A/2431:2440	NA	NA
57	HL_6S13_058 ➜	1/A/2498:2506	NA	NA
58	HL_6S13_059 ➜	1/A/2555:2562	NA	NA
59	HL_6S13_060 ➜	1/A/2578:2584	NA	NA
60	HL_6S13_061 ➜	1/A/2621:2626	NA	NA
61	HL_6S13_062 ➜	1/A/2685:2690	NA	NA
62	HL_6S13_063 ➜	1/A/2728:2733	NA	NA
63	HL_6S13_064 ➜	1/A/2770:2788	NA	NA
64	HL_6S13_065 ➜	1/A/2818:2826	NA	NA
65	HL_6S13_066 ➜	1/A/2839:2847	NA	NA
66	HL_6S13_067 ➜	1/A/2876:2881	NA	NA
67	HL_6S13_068 ➜	1/B/36:42	NA	NA
68	HL_6S13_069 ➜	1/B/83:88	NA	NA
69	HL_6S13_070 ➜	1/a/12:24	NA	NA
70	HL_6S13_071 ➜	1/a/77:92	NA	NA
71	HL_6S13_072 ➜	1/a/158:163	NA	NA
72	HL_6S13_073 ➜	1/a/191:200	NA	NA
73	HL_6S13_074 ➜	1/a/213:226	NA	NA
74	HL_6S13_075 ➜	1/a/267:275	NA	NA
75	HL_6S13_076 ➜	1/a/303:310	NA	NA
76	HL_6S13_077 ➜	1/a/328:341	NA	NA
77	HL_6S13_078 ➜	1/a/350:355	NA	NA
78	HL_6S13_079 ➜	1/a/386:393	NA	NA
79	HL_6S13_080 ➜	1/a/416:442	NA	NA
80	HL_6S13_081 ➜	1/a/470:479	NA	NA
81	HL_6S13_082 ➜	1/a/530:535	NA	NA
82	HL_6S13_083 ➜	1/a/625:631	NA	NA
83	HL_6S13_084 ➜	1/a/696:707	NA	NA
84	HL_6S13_085 ➜	1/a/734:739	NA	NA
85	HL_6S13_086 ➜	1/a/794:805	NA	NA
86	HL_6S13_087 ➜	1/a/849:854	NA	NA
87	HL_6S13_088 ➜	1/a/871:876	NA	NA
88	HL_6S13_089 ➜	1/a/906:911	NA	NA
89	HL_6S13_090 ➜	1/a/972:981	NA	NA
90	HL_6S13_091 ➜	1/a/1021:1026	NA	NA
91	HL_6S13_092 ➜	1/a/1038:1043	NA	NA
92	HL_6S13_093 ➜	1/a/1087:1092	NA	NA
93	HL_6S13_094 ➜	1/a/1100:1107	NA	NA
94	HL_6S13_095 ➜	1/a/1144:1151	NA	NA
95	HL_6S13_096 ➜	1/a/1174:1182	NA	NA
96	HL_6S13_097 ➜	1/a/1269:1286	NA	NA
97	HL_6S13_098 ➜	1/a/1319:1338	NA	NA
98	HL_6S13_099 ➜	1/a/1366:1376	NA	NA
99	HL_6S13_100 ➜	1/a/1454:1469	NA	NA
100	HL_6S13_101 ➜	1/a/1526:1531	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_6S13_053 ➜	incomplete nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_6S13_001 ➜	1/A/24:30,1/A/555:561	NA	NA
2	IL_6S13_002 ➜	1/A/36:37,1/A/488:490	NA	NA
3	IL_6S13_003 ➜	1/A/42:44,1/A/480:483	NA	NA
4	IL_6S13_004 ➜	1/A/81:85,1/A/97:104	NA	NA
5	IL_6S13_005 ➜	1/A/152:153,1/A/175:177	NA	NA
6	IL_6S13_006 ➜	1/A/186:187,1/A/215:217	NA	NA
7	IL_6S13_007 ➜	1/A/190:197,1/A/204:212	NA	NA
8	IL_6S13_008 ➜	1/A/241:248,1/A/256:262	NA	NA
9	IL_6S13_009 ➜	1/A/305:307,1/A/408:412	NA	NA
10	IL_6S13_010 ➜	1/A/527:530,1/A/541:554	NA	NA
11	IL_6S13_011 ➜	1/A/581:584,1/A/597:600	NA	NA
12	IL_6S13_012 ➜	1/A/607:609,1/A/618:620	NA	NA
13	IL_6S13_013 ➜	1/A/638:640,1/A/705:707	NA	NA
14	IL_6S13_014 ➜	1/A/649:653,1/A/663:667	NA	NA
15	IL_6S13_015 ➜	1/A/717:719,1/A/851:853	NA	NA
16	IL_6S13_016 ➜	1/A/719:723,1/A/844:851	NA	NA
17	IL_6S13_017 ➜	1/A/742:743,1/A/808:810	NA	NA
18	IL_6S13_018 ➜	1/A/747:748,1/A/773:775	NA	NA
19	IL_6S13_019 ➜	1/A/748:753,1/A/768:773	NA	NA
20	IL_6S13_020 ➜	1/A/757:758,1/A/762:764	NA	NA
21	IL_6S13_021 ➜	1/A/783:785,1/A/802:803	NA	NA
22	IL_6S13_022 ➜	1/A/820:822,1/A/832:836	NA	NA
23	IL_6S13_023 ➜	1/A/881:883,1/A/984:987	NA	NA
24	IL_6S13_024 ➜	1/A/889:893,1/A/975:978	NA	NA
25	IL_6S13_025 ➜	1/A/897:898,1/A/969:971	NA	NA
26	IL_6S13_026 ➜	1/A/901:907,1/A/960:966	NA	NA
27	IL_6S13_027 ➜	1/A/907:908,1/A/958:960	NA	NA
28	IL_6S13_028 ➜	1/A/909:913,1/A/954:957	NA	NA
29	IL_6S13_029 ➜	1/A/920:925,1/A/942:947	NA	NA
30	IL_6S13_030 ➜	1/A/1038:1040,1/A/1203:1204	NA	NA
31	IL_6S13_031 ➜	1/A/1042:1046,1/A/1197:1201	NA	NA
32	IL_6S13_032 ➜	1/A/1048:1055,1/A/1194:1195	NA	NA
33	IL_6S13_033 ➜	1/A/1055:1057,1/A/1193:1194	NA	NA
34	IL_6S13_034 ➜	1/A/1062:1068,1/A/1184:1188	NA	NA
35	IL_6S13_035 ➜	1/A/1068:1074,1/A/1168:1184	NA	NA
36	IL_6S13_036 ➜	1/A/1074:1078,1/A/1165:1168	NA	NA
37	IL_6S13_037 ➜	1/A/1081:1083,1/A/1160:1162	NA	NA
38	IL_6S13_038 ➜	1/A/1084:1095,1/A/1152:1159	NA	NA
39	IL_6S13_039 ➜	1/A/1096:1098,1/A/1149:1151	NA	NA
40	IL_6S13_040 ➜	1/A/1098:1100,1/A/1148:1149	NA	NA
41	IL_6S13_041 ➜	1/A/1100:1101,1/A/1125:1148	NA	NA
42	IL_6S13_042 ➜	1/A/1101:1103,1/A/1123:1125	NA	NA
43	IL_6S13_043 ➜	1/A/1211:1214,1/A/1218:1221	NA	NA
44	IL_6S13_044 ➜	1/A/1235:1237,1/A/1285:1288	NA	NA
45	IL_6S13_045 ➜	1/A/1243:1245,1/A/1277:1279	NA	NA
46	IL_6S13_046 ➜	1/A/1246:1253,1/A/1272:1276	NA	NA
47	IL_6S13_047 ➜	1/A/1257:1259,1/A/1266:1268	NA	NA
48	IL_6S13_048 ➜	1/A/1300:1307,1/A/2038:2044	NA	NA
49	IL_6S13_049 ➜	1/A/1356:1360,1/A/1368:1370	NA	NA
50	IL_6S13_050 ➜	1/A/1388:1392,1/A/1413:1417	NA	NA
51	IL_6S13_051 ➜	1/A/1394:1398,1/A/1407:1411	NA	NA
52	IL_6S13_052 ➜	1/A/1477:1480,1/A/1604:1607	NA	NA
53	IL_6S13_053 ➜	1/A/1511:1518,1/A/1562:1570	NA	NA
54	IL_6S13_054 ➜	1/A/1518:1523,1/A/1557:1562	NA	NA
55	IL_6S13_055 ➜	1/A/1524:1526,1/A/1549:1556	NA	NA
56	IL_6S13_056 ➜	1/A/1532:1534,1/A/1542:1543	NA	NA
57	IL_6S13_057 ➜	1/A/1695:1700,1/A/2031:2033	NA	NA
58	IL_6S13_058 ➜	1/A/1707:1710,1/A/2021:2024	NA	NA
59	IL_6S13_059 ➜	1/A/1710:1713,1/A/2020:2021	NA	NA
60	IL_6S13_060 ➜	1/A/1713:1718,1/A/2017:2020	NA	NA
61	IL_6S13_061 ➜	1/A/1730:1735,1/A/1740:1746	NA	NA
62	IL_6S13_062 ➜	1/A/1755:1759,1/A/1770:1774	NA	NA
63	IL_6S13_063 ➜	1/A/1797:1798,1/A/2007:2009	NA	NA
64	IL_6S13_064 ➜	1/A/1825:1831,1/A/1840:1848	NA	NA
65	IL_6S13_065 ➜	1/A/1864:1867,1/A/1929:1930	NA	NA
66	IL_6S13_066 ➜	1/A/1868:1870,1/A/1924:1928	NA	NA
67	IL_6S13_067 ➜	1/A/1873:1876,1/A/1920:1921	NA	NA
68	IL_6S13_068 ➜	1/A/1877:1882,1/A/1914:1919	NA	NA
69	IL_6S13_069 ➜	1/A/1883:1888,1/A/1908:1913	NA	NA
70	IL_6S13_070 ➜	1/A/1961:1972,1/A/1988:1991	NA	NA
71	IL_6S13_071 ➜	1/A/2077:2079,1/A/2644:2645	NA	NA
72	IL_6S13_072 ➜	1/A/2081:2083,1/A/2639:2642	NA	NA
73	IL_6S13_073 ➜	1/A/2094:2096,1/A/2469:2470	NA	NA
74	IL_6S13_074 ➜	1/A/2097:2098,1/A/2465:2468	NA	NA
75	IL_6S13_075 ➜	1/A/2108:2110,1/A/2263:2266	NA	NA
76	IL_6S13_076 ➜	1/A/2123:2126,1/A/2217:2220	NA	NA
77	IL_6S13_078 ➜	1/A/2151:2154,1/A/2188:2201	NA	NA
78	IL_6S13_079 ➜	1/A/2156:2168,1/A/2177:2186	NA	NA
79	IL_6S13_080 ➜	1/A/2229:2231,1/A/2247:2248	NA	NA
80	IL_6S13_081 ➜	1/A/2324:2326,1/A/2344:2348	NA	NA
81	IL_6S13_082 ➜	1/A/2377:2380,1/A/2391:2394	NA	NA
82	IL_6S13_083 ➜	1/A/2428:2430,1/A/2441:2442	NA	NA
83	IL_6S13_084 ➜	1/A/2481:2482,1/A/2523:2525	NA	NA
84	IL_6S13_085 ➜	1/A/2484:2486,1/A/2520:2521	NA	NA
85	IL_6S13_086 ➜	1/A/2486:2488,1/A/2516:2520	NA	NA
86	IL_6S13_087 ➜	1/A/2493:2497,1/A/2507:2511	NA	NA
87	IL_6S13_088 ➜	1/A/2534:2536,1/A/2606:2609	NA	NA
88	IL_6S13_089 ➜	1/A/2537:2539,1/A/2601:2605	NA	NA
89	IL_6S13_090 ➜	1/A/2539:2540,1/A/2598:2601	NA	NA
90	IL_6S13_091 ➜	1/A/2548:2550,1/A/2567:2571	NA	NA
91	IL_6S13_092 ➜	1/A/2618:2619,1/A/2628:2630	NA	NA
92	IL_6S13_093 ➜	1/A/2663:2667,1/A/2801:2809	NA	NA
93	IL_6S13_094 ➜	1/A/2670:2672,1/A/2797:2798	NA	NA
94	IL_6S13_095 ➜	1/A/2678:2685,1/A/2690:2696	NA	NA
95	IL_6S13_096 ➜	1/A/2703:2704,1/A/2757:2759	NA	NA
96	IL_6S13_097 ➜	1/A/2707:2711,1/A/2752:2754	NA	NA
97	IL_6S13_098 ➜	1/A/2714:2718,1/A/2745:2749	NA	NA
98	IL_6S13_099 ➜	1/A/2722:2723,1/A/2738:2741	NA	NA
99	IL_6S13_100 ➜	1/A/2764:2770,1/A/2788:2794	NA	NA
100	IL_6S13_101 ➜	1/A/2858:2859,1/A/2898:2900	NA	NA
101	IL_6S13_102 ➜	1/A/2863:2865,1/A/2891:2894	NA	NA
102	IL_6S13_103 ➜	1/A/2867:2872,1/A/2885:2889	NA	NA
103	IL_6S13_104 ➜	1/B/3:5,1/B/111:112	NA	NA
104	IL_6S13_105 ➜	1/B/5:8,1/B/107:111	NA	NA
105	IL_6S13_106 ➜	1/B/15:16,1/B/63:65	NA	NA
106	IL_6S13_107 ➜	1/B/21:30,1/B/48:58	NA	NA
107	IL_6S13_108 ➜	1/B/32:36,1/B/42:46	NA	NA
108	IL_6S13_109 ➜	1/B/69:77,1/B/94:102	NA	NA
109	IL_6S13_110 ➜	1/B/77:80,1/B/91:94	NA	NA
110	IL_6S13_111 ➜	1/a/31:33,1/a/560:561	NA	NA
111	IL_6S13_112 ➜	1/a/45:47,1/a/403:406	NA	NA
112	IL_6S13_113 ➜	1/a/48:53,1/a/367:369	NA	NA
113	IL_6S13_114 ➜	1/a/64:67,1/a/102:103	NA	NA
114	IL_6S13_115 ➜	1/a/68:72,1/a/97:101	NA	NA
115	IL_6S13_116 ➜	1/a/72:77,1/a/92:97	NA	NA
116	IL_6S13_117 ➜	1/a/128:131,1/a/239:240	NA	NA
117	IL_6S13_118 ➜	1/a/132:136,1/a/235:238	NA	NA
118	IL_6S13_119 ➜	1/a/250:255,1/a/285:292	NA	NA
119	IL_6S13_120 ➜	1/a/257:261,1/a/282:283	NA	NA
120	IL_6S13_121 ➜	1/a/261:263,1/a/279:282	NA	NA
121	IL_6S13_122 ➜	1/a/300:303,1/a/310:316	NA	NA
122	IL_6S13_123 ➜	1/a/375:377,1/a/400:401	NA	NA
123	IL_6S13_124 ➜	1/a/379:383,1/a/397:398	NA	NA
124	IL_6S13_125 ➜	1/a/383:385,1/a/394:397	NA	NA
125	IL_6S13_126 ➜	1/a/454:458,1/a/491:496	NA	NA
126	IL_6S13_127 ➜	1/a/510:512,1/a/549:552	NA	NA
127	IL_6S13_128 ➜	1/a/512:519,1/a/548:549	NA	NA
128	IL_6S13_129 ➜	1/a/523:529,1/a/536:544	NA	NA
129	IL_6S13_130 ➜	1/a/577:583,1/a/889:890	NA	NA
130	IL_6S13_131 ➜	1/a/588:592,1/a/765:769	NA	NA
131	IL_6S13_132 ➜	1/a/600:604,1/a/652:655	NA	NA
132	IL_6S13_133 ➜	1/a/605:610,1/a/644:651	NA	NA
133	IL_6S13_134 ➜	1/a/611:621,1/a/635:643	NA	NA
134	IL_6S13_135 ➜	1/a/662:663,1/a/759:762	NA	NA
135	IL_6S13_136 ➜	1/a/664:667,1/a/754:758	NA	NA
136	IL_6S13_137 ➜	1/a/669:675,1/a/747:752	NA	NA
137	IL_6S13_138 ➜	1/a/681:686,1/a/720:725	NA	NA
138	IL_6S13_139 ➜	1/a/690:696,1/a/707:716	NA	NA
139	IL_6S13_140 ➜	1/a/781:787,1/a/811:814	NA	NA
140	IL_6S13_141 ➜	1/a/787:791,1/a/807:811	NA	NA
141	IL_6S13_142 ➜	1/a/791:794,1/a/805:807	NA	NA
142	IL_6S13_143 ➜	1/a/931:936,1/a/1400:1405	NA	NA
143	IL_6S13_144 ➜	1/a/958:963,1/a/1236:1242	NA	NA
144	IL_6S13_145 ➜	1/a/994:996,1/a/1228:1231	NA	NA
145	IL_6S13_146 ➜	1/a/1002:1008,1/a/1052:1056	NA	NA
146	IL_6S13_147 ➜	1/a/1059:1061,1/a/1218:1219	NA	NA
147	IL_6S13_148 ➜	1/a/1061:1067,1/a/1214:1218	NA	NA
148	IL_6S13_149 ➜	1/a/1068:1072,1/a/1205:1213	NA	NA
149	IL_6S13_150 ➜	1/a/1125:1126,1/a/1195:1197	NA	NA
150	IL_6S13_151 ➜	1/a/1133:1143,1/a/1152:1162	NA	NA
151	IL_6S13_152 ➜	1/a/1257:1264,1/a/1294:1300	NA	NA
152	IL_6S13_153 ➜	1/a/1265:1268,1/a/1287:1293	NA	NA
153	IL_6S13_154 ➜	1/a/1313:1319,1/a/1338:1344	NA	NA
154	IL_6S13_155 ➜	1/a/1409:1411,1/a/1512:1515	NA	NA
155	IL_6S13_156 ➜	1/a/1411:1417,1/a/1505:1512	NA	NA
156	IL_6S13_157 ➜	1/a/1417:1419,1/a/1502:1505	NA	NA
157	IL_6S13_158 ➜	1/a/1422:1429,1/a/1492:1499	NA	NA
158	IL_6S13_159 ➜	1/a/1434:1437,1/a/1484:1487	NA	NA
159	IL_6S13_160 ➜	1/a/1440:1445,1/a/1477:1481	NA	NA
160	IL_6S13_161 ➜	1/a/1445:1447,1/a/1475:1477	NA	NA
161	IL_6S13_162 ➜	1/a/1450:1454,1/a/1469:1472	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_6S13_077 ➜	incomplete nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_6S13_001 ➜	1/A/30:31,1/A/520:527,1/A/554:555	NA	NA
2	J3_6S13_002 ➜	1/A/56:57,1/A/70:76,1/A/109:113	NA	NA
3	J3_6S13_003 ➜	1/A/272:277,1/A/294:303,1/A/414:416	NA	NA
4	J3_6S13_004 ➜	1/A/728:734,1/A/818:820,1/A/836:839	NA	NA
5	J3_6S13_005 ➜	1/A/743:745,1/A/777:781,1/A/805:808	NA	NA
6	J3_6S13_006 ➜	1/A/1335:1340,1/A/1669:1671,1/A/1683:1686	NA	NA
7	J3_6S13_007 ➜	1/A/1342:1346,1/A/1649:1655,1/A/1664:1667	NA	NA
8	J3_6S13_008 ➜	1/A/2118:2120,1/A/2223:2229,1/A/2248:2255	NA	NA
9	J3_6S13_009 ➜	1/A/2322:2324,1/A/2348:2350,1/A/2359:2364	NA	NA
10	J3_6S13_010 ➜	1/A/2544:2547,1/A/2572:2574,1/A/2588:2594	NA	NA
11	J3_6S13_011 ➜	1/A/2816:2818,1/A/2826:2831,1/A/2909:2913	NA	NA
12	J3_6S13_012 ➜	1/A/2833:2835,1/A/2851:2856,1/A/2902:2907	NA	NA
13	J3_6S13_013 ➜	1/B/9:14,1/B/66:69,1/B/102:106	NA	NA
14	J3_6S13_014 ➜	1/a/47:48,1/a/369:375,1/a/401:403	NA	NA
15	J3_6S13_015 ➜	1/a/594:596,1/a/659:662,1/a/762:763	NA	NA
16	J3_6S13_016 ➜	1/a/680:681,1/a/725:733,1/a/740:742	NA	NA
17	J3_6S13_017 ➜	1/a/834:837,1/a/866:870,1/a/877:883	NA	NA
18	J3_6S13_018 ➜	1/a/952:956,1/a/1244:1247,1/a/1347:1350	NA	NA
19	J3_6S13_019 ➜	1/a/963:971,1/a/982:994,1/a/1231:1236	NA	NA
20	J3_6S13_020 ➜	1/a/998:1002,1/a/1056:1058,1/a/1220:1226	NA	NA
21	J3_6S13_021 ➜	1/a/1083:1086,1/a/1093:1098,1/a/1109:1114	NA	NA
22	J3_6S13_022 ➜	1/a/1247:1251,1/a/1306:1313,1/a/1344:1347	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

6S13 Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops