#Varna 2DMotifNum NtsInstances
1
  • IL_01312.13
IL_01312.13
  • Basepair signature: cWW-cWW-cWW
  • History status: Updated, 1 parent
  • 3x3 UU cWW (8)
  • 3x3 CC cWW (4)
  • 3x3 CA cWW (3)
  • 3x3 AA cWW (3)
  • 3x3 UC cWW (1)
  • 3x3 UU cWW with bulged A (1)
  • 3x3 UG cWW (1)
  • 3x3 UU cWW water inserted (1)
  • 3x3 CA cWW with bulged A (1)
  • 6266
    2
    • IL_80007.16
    IL_80007.16
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged A (68)
  • 584
    3
    • IL_83039.11
    IL_83039.11
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged U (63)
  • 575
    4
    • IL_85877.9
    IL_85877.9
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (61)
  • Non canonical cWW and near pair (2)
  • 863
    5
    • IL_13730.12
    IL_13730.12
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Multiple bulged bases (43)
  • Stack outside cWW (4)
  • 553
    6
    • IL_80663.10
    IL_80663.10
    • Basepair signature: cWW-tHS-cSH-cWW
    • History status: Exact match
  • Major groove platform (34)
  • Major groove platform; stack outside cWW (11)
  • Other IL (1)
  • 546
    7
    • IL_06437.11
    IL_06437.11
    • Basepair signature: cWW-cSH-tHS-cWW
    • History status: Exact match
  • Minor groove platform (45)
  • 545
    8
    • IL_04038.4
    IL_04038.4
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    545
    9
    • IL_42589.6
    IL_42589.6
    • Basepair signature: cWW-cHW-cWW
    • History status: Exact match
  • Isolated cWH basepair (34)
  • Other IL (8)
  • 643
    10
    • IL_56467.6
    IL_56467.6
    • Basepair signature: cWW-tSH-tHS-tHS-cWW
    • History status: Exact match
  • Triple sheared (28)
  • AAA cross-strand stack (5)
  • Other IL (1)
  • 1034
    11
    • IL_61258.10
    IL_61258.10
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged C (24)
  • 533
    12
    • IL_29549.9
    IL_29549.9
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (27)
  • Kink-turn with non-sequential stacking (5)
  • 1332
    13
    • IL_59137.10
    IL_59137.10
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged G (27)
  • 530
    14
    • IL_09705.7
    IL_09705.7
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Exact match
  • Double sheared (24)
  • Other IL (2)
  • tWS-tSW (1)
  • 827
    15
    • IL_63596.4
    IL_63596.4
    • Basepair signature: cWW-tWH-cSH-L-cWS-cWW
    • History status: Exact match
  • C-loop (21)
  • 721
    16
    • IL_09061.4
    IL_09061.4
    • Basepair signature: cWW-cSW-cWW
    • History status: Exact match
  • Major groove minor groove platform; mini C-loop (15)
  • Major groove minor groove platform with intercalation; mini C-loop (3)
  • 618
    17
    • IL_53523.5
    IL_53523.5
    • Basepair signature: cWW-tWH-L-tHS-cWW
    • History status: Exact match
  • UAA/GAN (17)
  • UAA/GAN related (1)
  • 918
    18
    • IL_70995.6
    IL_70995.6
    • Basepair signature: cWW-tSH-L-cWW
    • History status: Exact match
  • Major groove platform; stack outside cWW (16)
  • 616
    19
    • IL_39521.5
    IL_39521.5
    • Basepair signature: cWW-tSH-tHW-tHS-cWW
    • History status: Exact match
  • tSH-tHW-tHS (16)
  • 1016
    20
    • IL_04346.5
    IL_04346.5
    • Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 8x7 Sarcin-Ricin; G-bulge (14)
  • 1514
    21
    • IL_08757.3
    IL_08757.3
    • Basepair signature: cWW-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW (12)
  • Other IL (1)
  • 813
    22
    • IL_38958.6
    IL_38958.6
    • Basepair signature: cWW-tHS-cWW
    • History status: Exact match
  • Isolated tHS basepair (13)
  • 613
    23
    • IL_35110.5
    IL_35110.5
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 8x7 Sarcin-Ricin; G-bulge (8)
  • Sarcin-Ricin target in LSU H95; G-bulge (5)
  • 1313
    24
    • IL_95485.6
    IL_95485.6
    • Basepair signature: cWW-cSH-cWW-cWW
    • History status: Exact match
  • Major groove platform with extra cWW (10)
  • Major groove platform with extra cWW related (3)
  • 713
    25
    • IL_67621.5
    IL_67621.5
    • Basepair signature: cWW-cWS-cWW
    • History status: Exact match
  • Isolated cWS basepair (11)
  • Other IL (1)
  • 612
    26
    • IL_97601.6
    IL_97601.6
    • Basepair signature: cWW-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (8)
  • 8-nt loop receptor (2)
  • 810
    27
    • IL_87332.1
    IL_87332.1
    • Basepair signature: cWW-cWW-R-cWW
    • History status: Exact match
  • Minor groove platform with extra cWW (5)
  • 710
    28
    • IL_87630.5
    IL_87630.5
    • Basepair signature: cWW-tSH-cSH-cWW
    • History status: Exact match
  • Major groove platform with extra pair (9)
  • Other IL (1)
  • 710
    29
    • IL_94431.4
    IL_94431.4
    • Basepair signature: cWW-cSH-cWS-cWW
    • History status: Exact match
  • Minor groove platform (10)
  • 610
    30
    • IL_15861.6
    IL_15861.6
    • Basepair signature: cWW-L-L-L-cSH-L-cWW
    • History status: Exact match
  • SSU/LSU pseudoknot (10)
  • 1010
    31
    • IL_72766.2
    IL_72766.2
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
  • Stack outside cWW (6)
  • Other IL (2)
  • Major groove platform with non-sequential stacking (1)
  • Multiple bulged bases (1)
  • 510
    32
    • IL_69632.1
    IL_69632.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Multiple bulged bases (6)
  • 69
    33
    • IL_19389.4
    IL_19389.4
    • Basepair signature: cWW-L-cSH-cWW
    • History status: Exact match
  • Major groove platform with intercalated tWH (5)
  • Left turn (3)
  • Other IL (1)
  • 69
    34
    • IL_34907.2
    IL_34907.2
    • Basepair signature: cWW-R-tWH-L-tHS-cWW
    • History status: Exact match
  • tSH-tHS-tHW (3)
  • UAA/GAN with extra pair (3)
  • UAA/GAN (3)
  • 109
    35
    • IL_81389.2
    IL_81389.2
    • Basepair signature: cWW-tSH-tHS-tHS-cWW
    • History status: Exact match
  • UAA/GAN related (5)
  • UAA/GAN variation (4)
  • 99
    36
    • IL_58764.1
    IL_58764.1
    • Basepair signature: cWW-L-R-R-cWW-cWW
    • History status: Exact match
  • UAA/GAN variation (1)
  • Tandem non-canonical cWW pairs (1)
  • 99
    37
    • IL_95601.1
    IL_95601.1
    • Basepair signature: cWW-tSH-cWW
    • History status: Exact match
  • Minor groove platform with intercalation (6)
  • Minor groove platform (1)
  • 59
    38
    • IL_76308.3
    IL_76308.3
    • Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHS-cWW (5)
  • Tandem non-canonical cWW pairs with near WC pairs (2)
  • Other IL (1)
  • 128
    39
    • IL_54997.5
    IL_54997.5
    • Basepair signature: cWW-tWW-cWW
    • History status: Exact match
  • Isolated tWW turn (7)
  • Decoding loop with one bulged A (1)
  • 68
    40
    • IL_31836.1
    IL_31836.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    58
    41
    • IL_50676.5
    IL_50676.5
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Exact match
  • Tandem non-canonical cWW pairs (1)
  • 88
    42
    • IL_21340.1
    IL_21340.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged U (5)
  • 57
    43
    • IL_19222.1
    IL_19222.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Multiple bulged bases (3)
  • 67
    44
    • IL_96042.4
    IL_96042.4
    • Basepair signature: cWW-cWW-cSH-R-cWW
    • History status: Exact match
  • Major groove minor groove platform with extra cWW (7)
  • 87
    45
    • IL_58103.5
    IL_58103.5
    • Basepair signature: cWW-L-L-cWS-tSW-cWW
    • History status: Exact match
  • Symmetric double minor groove platform (6)
  • Minor groove platform (1)
  • 97
    46
    • IL_66584.5
    IL_66584.5
    • Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW
    • History status: Exact match
  • tSH-tSH-tHH-tHS (5)
  • Quadruple sheared (2)
  • 127
    47
    • IL_56455.3
    IL_56455.3
    • Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW
    • History status: Exact match
  • Bacterial 5S Loop E (6)
  • 186
    48
    • IL_66414.5
    IL_66414.5
    • Basepair signature: cWW-cWW-tSH-tHS-tHS-L-R-cWW
    • History status: Exact match
    146
    49
    • IL_02060.4
    IL_02060.4
    • Basepair signature: cWW-cHH-cWW
    • History status: Exact match
    56
    50
    • IL_17470.5
    IL_17470.5
    • Basepair signature: cWW-R-tHW-tHW-tWW-cWW
    • History status: Exact match
    136
    51
    • IL_49767.4
    IL_49767.4
    • Basepair signature: cWW-cWW-tWH-L-tHS-cWW
    • History status: Exact match
  • UAA/GAN with extra cWW (5)
  • Other IL (1)
  • 126
    52
    • IL_55456.1
    IL_55456.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    76
    53
    • IL_90991.5
    IL_90991.5
    • Basepair signature: cWW-cWW
    • History status: Exact match
    86
    54
    • IL_51087.2
    IL_51087.2
    • Basepair signature: cWW-L-R-R-R-L-cWW
    • History status: Exact match
    96
    55
    • IL_40508.4
    IL_40508.4
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged A (1)
  • 56
    56
    • IL_51265.1
    IL_51265.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-cWW
    • History status: Exact match
  • Kink-turn from U4 (5)
  • Kink-turn from T-box riboswitch (1)
  • 116
    57
    • IL_34626.4
    IL_34626.4
    • Basepair signature: cWW-L-R-L-cWW
    • History status: Exact match
    75
    58
    • IL_90538.3
    IL_90538.3
    • Basepair signature: cWW-cSS-tSS-L-tSH-tSS-tHS-L-bif-cWW
    • History status: Exact match
  • Kink-turn (5)
  • 145
    59
    • IL_17069.3
    IL_17069.3
    • Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW
    • History status: Exact match
    165
    60
    • IL_08376.2
    IL_08376.2
    • Basepair signature: cWW-tWH-tSW-L-cWW
    • History status: Exact match
  • C-loop (5)
  • 75
    61
    • IL_12566.2
    IL_12566.2
    • Basepair signature: cWW-L-L-L-tHS-cWW
    • History status: Exact match
    95
    62
    • IL_57188.3
    IL_57188.3
    • Basepair signature: cWW-tWW-cSH-L-tWW-cSH-cWW
    • History status: Exact match
    125
    63
    • IL_02284.3
    IL_02284.3
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    65
    64
    • IL_98882.3
    IL_98882.3
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    55
    65
    • IL_05922.1
    IL_05922.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    75
    66
    • IL_94518.4
    IL_94518.4
    • Basepair signature: cWW-bif-cWW-cWW-cWW-cWW
    • History status: Exact match
    125
    67
    • IL_60695.6
    IL_60695.6
    • Basepair signature: cWW-L-R-R-R-cWW
    • History status: Exact match
    105
    68
    • IL_23544.2
    IL_23544.2
    • Basepair signature: cWW-L-R-R-cWW
    • History status: Exact match
    85
    69
    • IL_60992.5
    IL_60992.5
    • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
    • History status: Exact match
    185
    70
    • IL_55953.2
    IL_55953.2
    • Basepair signature: cWW-tSH-R-tHS-L-bif-cWW
    • History status: Exact match
    125
    71
    • IL_72938.1
    IL_72938.1
    • Basepair signature: cWW-cWW-cSH-cSH-tHS-cWW
    • History status: Exact match
  • 8-nt loop receptor (3)
  • Other IL (1)
  • 84
    72
    • IL_68506.1
    IL_68506.1
    • Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-R-cWW-cWW
    • History status: Exact match
    204
    73
    • IL_54678.3
    IL_54678.3
    • Basepair signature: cWW-cWW
    • History status: Exact match
    54
    74
    • IL_97697.1
    IL_97697.1
    • Basepair signature: cWW-L-R-L-L-L-L-bif-cWW
    • History status: Exact match
    134
    75
    • IL_83162.3
    IL_83162.3
    • Basepair signature: cWW-tSH-L-R-L-tHH-cWW
    • History status: Exact match
    114
    76
    • IL_08296.3
    IL_08296.3
    • Basepair signature: cWW-tSH-R-R-cWW
    • History status: Exact match
    104
    77
    • IL_45944.2
    IL_45944.2
    • Basepair signature: cWW-L-L-tWH-L-L-L-cWW
    • History status: Exact match
    124
    78
    • IL_34915.2
    IL_34915.2
    • Basepair signature: cWW-R-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (4)
  • 94
    79
    • IL_66450.1
    IL_66450.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    54
    80
    • IL_05867.1
    IL_05867.1
    • Basepair signature: cWW-cWW-L-R-cWW-cWW
    • History status: Exact match
    104
    81
    • IL_19954.1
    IL_19954.1
    • Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW
    • History status: Exact match
    124
    82
    • IL_68780.2
    IL_68780.2
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (3)
  • 134
    83
    • IL_67474.3
    IL_67474.3
    • Basepair signature: cWW-R-R-cWW
    • History status: Exact match
    64
    84
    • IL_47154.5
    IL_47154.5
    • Basepair signature: cWW-cSW-tHS-cWW
    • History status: Exact match
    94
    85
    • IL_75461.2
    IL_75461.2
    • Basepair signature: cWW-cSS-L-R-R-cWW
    • History status: Exact match
    104
    86
    • IL_09768.1
    IL_09768.1
    • Basepair signature: cWW-R-tHS-tSH-cWW
    • History status: Exact match
  • Minor groove platform with extra cWW (1)
  • 93
    87
    • IL_83121.7
    IL_83121.7
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    53
    88
    • IL_07931.5
    IL_07931.5
    • Basepair signature: cWW-cWW-R-cWW
    • History status: Exact match
    73
    89
    • IL_58960.1
    IL_58960.1
    • Basepair signature: cWW-L-L-tWW-L-L-L-cWW
    • History status: Exact match
    113
    90
    • IL_76195.1
    IL_76195.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    63
    91
    • IL_87284.1
    IL_87284.1
    • Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW
    • History status: Exact match
  • tSH-tHW-tWH-tHS (3)
  • 123
    92
    • IL_09907.1
    IL_09907.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    73
    93
    • IL_65851.1
    IL_65851.1
    • Basepair signature: cWW-L-R-R-L-tHW-L-cWW-cWW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (1)
  • 143
    94
    • IL_93830.2
    IL_93830.2
    • Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)
  • 143
    95
    • IL_68574.2
    IL_68574.2
    • Basepair signature: cWW-tSH-tHH-cWW
    • History status: Exact match
    93
    96
    • IL_24606.1
    IL_24606.1
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)
  • 143
    97
    • IL_74051.1
    IL_74051.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-L-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 123
    98
    • IL_05265.1
    IL_05265.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    63
    99
    • IL_19569.2
    IL_19569.2
    • Basepair signature: cWW-L-L-L-L-cWW
    • History status: Exact match
    93
    100
    • IL_26785.1
    IL_26785.1
    • Basepair signature: cWW-cWW-L-R-R-tSH-tHW-cSH-tHH-tHS-cWW
    • History status: Exact match
  • 10x8 Sarcin-Ricin; G-bulge (3)
  • 183
    101
    • IL_87880.2
    IL_87880.2
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    63
    102
    • IL_27393.6
    IL_27393.6
    • Basepair signature: cWW-L-L-L-L-L-L-cWW
    • History status: Exact match
    103
    103
    • IL_88269.2
    IL_88269.2
    • Basepair signature: cWW-tSH-tHW-L-cSH-R-cWW
    • History status: Exact match
  • 6x5 Sarcin-Ricin; G-bulge (3)
  • 113
    104
    • IL_02349.4
    IL_02349.4
    • Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with bulged A; G-bulge (2)
  • 143
    105
    • IL_00512.1
    IL_00512.1
    • Basepair signature: cWW-L-R-tWW-cWW
    • History status: Exact match
    93
    106
    • IL_09129.1
    IL_09129.1
    • Basepair signature: cWW-tWH-tWH-L-R-L-tWW-cWW
    • History status: Exact match
    143
    107
    • IL_35904.1
    IL_35904.1
    • Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW
    • History status: Exact match
  • Kink-turn (3)
  • 123
    108
    • IL_33812.1
    IL_33812.1
    • Basepair signature: cWW-L-R-R-R-R-L-cWW
    • History status: Exact match
    103
    109
    • IL_69440.1
    IL_69440.1
    • Basepair signature: cWW-cSH-tHS-cWW
    • History status: Exact match
    83
    110
    • IL_39512.1
    IL_39512.1
    • Basepair signature: cWW-L-R-R-cWW
    • History status: Exact match
    73
    111
    • IL_75283.1
    IL_75283.1
    • Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW
    • History status: Exact match
    183
    112
    • IL_64900.1
    IL_64900.1
    • Basepair signature: cWW-cWW-tSS-L-tSH-tHS-tHS-cWW
    • History status: Exact match
  • Kink-turn (3)
  • 153
    113
    • IL_71960.4
    IL_71960.4
    • Basepair signature: cWW-cSH-cWW
    • History status: Exact match
  • Minor groove platform (2)
  • Single bulged A (1)
  • 53
    114
    • IL_69507.1
    IL_69507.1
    • Basepair signature: cWW-cSH-cWW
    • History status: Exact match
  • Minor groove platform (3)
  • 73
    115
    • IL_68057.1
    IL_68057.1
    • Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW
    • History status: Exact match
  • Kink-turn (3)
  • 133
    116
    • IL_45289.1
    IL_45289.1
    • Basepair signature: cWW-bif-cSH-cSW-cWW-cWW
    • History status: Exact match
    82
    117
    • IL_16456.1
    IL_16456.1
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (2)
  • 132
    118
    • IL_36973.5
    IL_36973.5
    • Basepair signature: cWW-tSH-L-R-R-R-L-L-cWW-cWW
    • History status: Exact match
    142
    119
    • IL_51590.1
    IL_51590.1
    • Basepair signature: cWW-cSH-tWH-cSH-cWW-cWW
    • History status: Exact match
  • Other IL (1)
  • C-loop with extra cWW pair (1)
  • 92
    120
    • IL_95688.1
    IL_95688.1
    • Basepair signature: cWW-L-cSS-cSS-L-R-cWW
    • History status: Exact match
    112
    121
    • IL_73705.1
    IL_73705.1
    • Basepair signature: cWW-cWW-cWW-cWW
    • History status: Exact match
    82
    122
    • IL_30542.1
    IL_30542.1
    • Basepair signature: cWW-L-R-R-R-cWW
    • History status: Exact match
    82
    123
    • IL_01759.1
    IL_01759.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    62
    124
    • IL_37722.1
    IL_37722.1
    • Basepair signature: cWW-cWW-tSH-tWH-tHS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 152
    125
    • IL_48280.2
    IL_48280.2
    • Basepair signature: cWW-L-tHS-cWW
    • History status: Exact match
    82
    126
    • IL_83354.1
    IL_83354.1
    • Basepair signature: cWW-R-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (2)
  • 102
    127
    • IL_19557.1
    IL_19557.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    52
    128
    • IL_42032.1
    IL_42032.1
    • Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW
    • History status: Exact match
    112
    129
    • IL_52451.10
    IL_52451.10
    • Basepair signature: cWW-cWW-cWH-cWW
    • History status: Exact match
    92
    130
    • IL_76386.1
    IL_76386.1
    • Basepair signature: cWW-L-R-L-cWW-cWW-cWW
    • History status: Exact match
    112
    131
    • IL_12418.1
    IL_12418.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    62
    132
    • IL_22615.1
    IL_22615.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW
    • History status: Exact match
    242
    133
    • IL_24905.8
    IL_24905.8
    • Basepair signature: cWW-cSW-R-cWW
    • History status: Exact match
    92
    134
    • IL_59423.1
    IL_59423.1
    • Basepair signature: cWW-L-R-R-tHS-cWW
    • History status: Exact match
    102
    135
    • IL_70285.1
    IL_70285.1
    • Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW
    • History status: Exact match
    162
    136
    • IL_05523.1
    IL_05523.1
    • Basepair signature: cWW-L-R-cWW-cSW-cSH-cWW
    • History status: Exact match
    102
    137
    • IL_38634.5
    IL_38634.5
    • Basepair signature: cWW-cWH-tWS-cWW
    • History status: Exact match
    102
    138
    • IL_19724.1
    IL_19724.1
    • Basepair signature: cWW-cSH-R-R-cWW
    • History status: Exact match
    82
    139
    • IL_68722.1
    IL_68722.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    62
    140
    • IL_22863.1
    IL_22863.1
    • Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHH-tHS (2)
  • 172
    141
    • IL_80884.1
    IL_80884.1
    • Basepair signature: cWW-cWW-R-R-R-R-cWW
    • History status: Exact match
    112
    142
    • IL_53318.1
    IL_53318.1
    • Basepair signature: cWW-cWW-tWH-tSH-tHS-cWW
    • History status: Exact match
    112
    143
    • IL_55658.1
    IL_55658.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    62
    144
    • IL_70627.1
    IL_70627.1
    • Basepair signature: cWW-R-R-tWH-L-R-cWW
    • History status: Exact match
    112
    145
    • IL_27900.1
    IL_27900.1
    • Basepair signature: cWW-tSH-cWW
    • History status: Exact match
    62
    146
    • IL_96596.1
    IL_96596.1
    • Basepair signature: cWW-tSH-tHW-L-R-cWW-cWW
    • History status: Exact match
    142
    147
    • IL_02413.1
    IL_02413.1
    • Basepair signature: cWW-L-R-L-L-cWW
    • History status: Exact match
    82
    148
    • IL_81522.1
    IL_81522.1
    • Basepair signature: cWW-cSH-L-cWS-cWW
    • History status: Exact match
  • Major groove minor groove platform with intercalation; mini C-loop (2)
  • 92
    149
    • IL_18472.1
    IL_18472.1
    • Basepair signature: cWW-R-tSW-R-tSW-L-L-cWW
    • History status: Exact match
    112
    150
    • IL_28060.3
    IL_28060.3
    • Basepair signature: cWW-tHH-L-cWS-R-cWW
    • History status: Exact match
  • Major groove minor groove platform with tHH (2)
  • 82
    151
    • IL_58346.1
    IL_58346.1
    • Basepair signature: cWW-cSH-R-R-R-L-cWW-cWW
    • History status: Exact match
    112
    152
    • IL_44093.1
    IL_44093.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    62
    153
    • IL_53528.1
    IL_53528.1
    • Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    132
    154
    • IL_77870.1
    IL_77870.1
    • Basepair signature: cWW-bif-L-L-L-tHS-cWW-cWW
    • History status: Exact match
    132
    155
    • IL_23663.4
    IL_23663.4
    • Basepair signature: cWW-cWW-cSH-cWW
    • History status: Exact match
    72
    156
    • IL_36143.2
    IL_36143.2
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    72
    157
    • IL_47002.1
    IL_47002.1
    • Basepair signature: cWW-tSH-L-L-tHH-cWW
    • History status: Exact match
    112
    158
    • IL_64879.1
    IL_64879.1
    • Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW
    • History status: Exact match
  • Triple sheared related (2)
  • 112
    159
    • IL_82426.3
    IL_82426.3
    • Basepair signature: cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW
    • History status: Exact match
    162
    160
    • IL_92440.5
    IL_92440.5
    • Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (2)
  • 152
    161
    • IL_18894.1
    IL_18894.1
    • Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW
    • History status: Exact match
  • Quadruple sheared (2)
  • 122
    162
    • IL_01206.1
    IL_01206.1
    • Basepair signature: cWW-L-cWW
    • History status: Exact match
    92
    163
    • IL_34470.1
    IL_34470.1
    • Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)
  • 172
    164
    • IL_79393.8
    IL_79393.8
    • Basepair signature: cWW-cWW-tSH-R-R-R-cWW
    • History status: Exact match
    112
    165
    • IL_86428.1
    IL_86428.1
    • Basepair signature: cWW-tHW-cWW-L-cSH-R-tHS-cWW-cWW
    • History status: Exact match
    122
    166
    • IL_34535.1
    IL_34535.1
    • Basepair signature: cWW-tHH-cWW
    • History status: Exact match
  • Other IL (1)
  • 62
    167
    • IL_53581.1
    IL_53581.1
    • Basepair signature: cWW-tWW-L-tWH-tWH-tWH-tSS-L-L-L-bif-cWW-tSS-cSS-R-R-cWW
    • History status: Exact match
  • Kink-turn related (2)
  • 232
    168
    • IL_23836.1
    IL_23836.1
    • Basepair signature: cWW-tHW-tHS-cWW-cWW
    • History status: Exact match
    102
    169
    • IL_01502.1
    IL_01502.1
    • Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW
    • History status: Exact match
    141
    170
    • IL_34590.1
    IL_34590.1
    • Basepair signature: cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 181
    171
    • IL_54670.1
    IL_54670.1
    • Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW
    • History status: Exact match
    131
    172
    • IL_61275.1
    IL_61275.1
    • Basepair signature: cWW-L-R-tHW-cWW
    • History status: Exact match
    111
    173
    • IL_69573.1
    IL_69573.1
    • Basepair signature: cWW-L-R-tWH-L-R-R-R-R-L-L-tWW-cWW
    • History status: Exact match
    171
    174
    • IL_90346.1
    IL_90346.1
    • Basepair signature: cWW-L-R-R-R-R-cWW
    • History status: Exact match
    101
    175
    • IL_23934.1
    IL_23934.1
    • Basepair signature: cWW-R-tWH-tHS-cWW
    • History status: Exact match
    91
    176
    • IL_47743.1
    IL_47743.1
    • Basepair signature: cWW-cSW-tWH-cSH-L-cWS-cWW
    • History status: Exact match
    101
    177
    • IL_65320.1
    IL_65320.1
    • Basepair signature: cWW-L-R-R-R-L-tHW-L-R-R-L-cWW
    • History status: Exact match
    151
    178
    • IL_93585.1
    IL_93585.1
    • Basepair signature: cWW-L-L-L-tWH-cSH-L-cWW-cWW
    • History status: Exact match
    111
    179
    • IL_29821.1
    IL_29821.1
    • Basepair signature: cWW-tWH-L-R-tHS-cWW
    • History status: Exact match
    111
    180
    • IL_41414.1
    IL_41414.1
    • Basepair signature: cWW-cWW-R-R-cSH-R-bif-tWH-R-R-R-R-cWS-cWW
    • History status: Exact match
    211
    181
    • IL_01560.1
    IL_01560.1
    • Basepair signature: cWW-L-L-L-cSH-L-L-cWW
    • History status: Exact match
    111
    182
    • IL_21570.1
    IL_21570.1
    • Basepair signature: cWW-cSW-cWW-cWW
    • History status: Exact match
    81
    183
    • IL_45481.1
    IL_45481.1
    • Basepair signature: cWW-L-R-cHW-L-L-tSW-L-cWW
    • History status: Exact match
    161
    184
    • IL_61300.1
    IL_61300.1
    • Basepair signature: cWW-cSS-L-tHW-tSS-L-L-L-L-L-L-cWW
    • History status: Exact match
    171
    185
    • IL_80355.1
    IL_80355.1
    • Basepair signature: cWW-tWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    261
    186
    • IL_90348.1
    IL_90348.1
    • Basepair signature: cWW-R-R-R-cWW
    • History status: Exact match
    81
    187
    • IL_04667.1
    IL_04667.1
    • Basepair signature: cWW-tWH-cSW-L-R-R-L-tHS-cWW
    • History status: Exact match
    161
    188
    • IL_16702.1
    IL_16702.1
    • Basepair signature: cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW
    • History status: Exact match
    151
    189
    • IL_24106.1
    IL_24106.1
    • Basepair signature: cWW-tSH-tWH-tWH-R-R-R-R-R-R-R-cWW
    • History status: Exact match
    181
    190
    • IL_37629.1
    IL_37629.1
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    61
    191
    • IL_47972.1
    IL_47972.1
    • Basepair signature: cWW-L-R-R-R-cWW
    • History status: Exact match
    81
    192
    • IL_41593.1
    IL_41593.1
    • Basepair signature: cWW-cHW-tHW-tHW-tHW-bif-cWW
    • History status: Exact match
    161
    193
    • IL_51877.1
    IL_51877.1
    • Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW
    • History status: Exact match
    131
    194
    • IL_95811.1
    IL_95811.1
    • Basepair signature: cWW-L-L-L-cWW-L-bif-cWW
    • History status: Exact match
  • Vitamin B12 Aptamer (1)
  • 111
    195
    • IL_11882.1
    IL_11882.1
    • Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW
    • History status: Exact match
    131
    196
    • IL_22436.1
    IL_22436.1
    • Basepair signature: cWW-L-cSS-tWH-tHW-cWW-cWW
    • History status: Exact match
  • Kink-turn related (1)
  • 131
    197
    • IL_34780.1
    IL_34780.1
    • Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 181
    198
    • IL_54896.1
    IL_54896.1
    • Basepair signature: cWW-L-L-L-L-L-L-tSS-cWW
    • History status: Exact match
    131
    199
    • IL_61812.1
    IL_61812.1
    • Basepair signature: cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW
    • History status: Exact match
  • 9x8 Sarcin-Ricin; G-bulge (1)
  • 171
    200
    • IL_69979.1
    IL_69979.1
    • Basepair signature: cWW-L-R-R-R-R-L-L-L-cWW
    • History status: Exact match
    121
    201
    • IL_80412.1
    IL_80412.1
    • Basepair signature: cWW-R-R-R-R-R-tWS-cWW
    • History status: Exact match
    121
    202
    • IL_98353.1
    IL_98353.1
    • Basepair signature: cWW-cWS-L-L-cWW
    • History status: Exact match
    111
    203
    • IL_04736.1
    IL_04736.1
    • Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW
    • History status: Exact match
    141
    204
    • IL_56501.1
    IL_56501.1
    • Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)
  • 131
    205
    • IL_65876.1
    IL_65876.1
    • Basepair signature: cWW-tSH-L-R-R-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 131
    206
    • IL_94165.1
    IL_94165.1
    • Basepair signature: cWW-L-R-L-tHS-cWW
    • History status: Exact match
    91
    207
    • IL_31504.1
    IL_31504.1
    • Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW
    • History status: Exact match
    201
    208
    • IL_59281.1
    IL_59281.1
    • Basepair signature: cWW-cWW-cSW-cSH-cWW
    • History status: Exact match
    91
    209
    • IL_68633.1
    IL_68633.1
    • Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW-cWW
    • History status: Exact match
  • 9x7 Sarcin-Ricin with inserted C; G-bulge (1)
  • 161
    210
    • IL_95961.1
    IL_95961.1
    • Basepair signature: cWW-R-R-tHS-cWW
    • History status: Exact match
    91
    211
    • IL_01963.1
    IL_01963.1
    • Basepair signature: cWW-L-R-R-R-cSH-cWW
    • History status: Exact match
    101
    212
    • IL_46112.1
    IL_46112.1
    • Basepair signature: cWW-L-L-L-L-L-cWW
    • History status: Exact match
    111
    213
    • IL_62654.1
    IL_62654.1
    • Basepair signature: cWW-tSH-tHH-tHS-cWW
    • History status: Exact match
  • tSH-tHH-tHS (1)
  • 111
    214
    • IL_70096.1
    IL_70096.1
    • Basepair signature: cWW-L-cWW-cWW
    • History status: Exact match
    101
    215
    • IL_80617.1
    IL_80617.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    216
    • IL_90720.1
    IL_90720.1
    • Basepair signature: cWW-L-L-tHS-R-cWW
    • History status: Exact match
    91
    217
    • IL_98711.1
    IL_98711.1
    • Basepair signature: cWW-tSH-tHW-tWW-cWW
    • History status: Exact match
  • tSH-tHW-tWW (1)
  • 111
    218
    • IL_17094.1
    IL_17094.1
    • Basepair signature: cWW-L-L-tWH-L-R-R-L-cWW
    • History status: Exact match
    121
    219
    • IL_38044.1
    IL_38044.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
    • History status: Exact match
    231
    220
    • IL_49655.1
    IL_49655.1
    • Basepair signature: cWW-tWW-L-R-L-L-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    261
    221
    • IL_56867.1
    IL_56867.1
    • Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW
    • History status: Exact match
    171
    222
    • IL_74184.1
    IL_74184.1
    • Basepair signature: cWW-L-L-L-L-L-tHS-cWW
    • History status: Exact match
    121
    223
    • IL_84315.1
    IL_84315.1
    • Basepair signature: cWW-tHS-cWS-R-tSW-R-R-cWW
    • History status: Exact match
    101
    224
    • IL_94351.1
    IL_94351.1
    • Basepair signature: cWW-tSH-L-R-L-tHS-cWW
    • History status: Exact match
    111
    225
    • IL_42092.1
    IL_42092.1
    • Basepair signature: cWW-tSH-L-L-L-cWW
    • History status: Exact match
    91
    226
    • IL_52729.1
    IL_52729.1
    • Basepair signature: cWW-cWW-cWW-cWW-cWH-cWW
    • History status: Exact match
    121
    227
    • IL_68674.1
    IL_68674.1
    • Basepair signature: cWW-bif-tSH-tWH-tHW-tHS-cWW-cWW
    • History status: Exact match
  • tSH-tHW-tHS with extra cWW pairs (1)
  • 141
    228
    • IL_76900.1
    IL_76900.1
    • Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 141
    229
    • IL_87677.1
    IL_87677.1
    • Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW
    • History status: Exact match
  • tWH-tWH-tHW-tHW (1)
  • 131
    230
    • IL_95993.1
    IL_95993.1
    • Basepair signature: cWW-R-tSS-tWW-tWW-cWW
    • History status: Exact match
  • Kink-turn related (1)
  • 141
    231
    • IL_22821.1
    IL_22821.1
    • Basepair signature: cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW
    • History status: Exact match
  • Pseudoknot (1)
  • 191
    232
    • IL_46401.1
    IL_46401.1
    • Basepair signature: cWW-L-L-L-L-tHH-cWW
    • History status: Exact match
    101
    233
    • IL_55304.1
    IL_55304.1
    • Basepair signature: cWW-cWW-R-R-cWW
    • History status: Exact match
    81
    234
    • IL_62827.1
    IL_62827.1
    • Basepair signature: cWW-R-cWH-R-R-R-cWW
    • History status: Exact match
    111
    235
    • IL_90922.1
    IL_90922.1
    • Basepair signature: cWW-tSH-tWH-tHS-tSS-tSS-R-cWW
    • History status: Exact match
  • Kink-turn (1)
  • 131
    236
    • IL_98876.1
    IL_98876.1
    • Basepair signature: cWW-cWW-L-R-R-tHW-bif-cWW
    • History status: Exact match
    131
    237
    • IL_74271.1
    IL_74271.1
    • Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW
    • History status: Exact match
    121
    238
    • IL_84409.1
    IL_84409.1
    • Basepair signature: cWW-tSS-tHH-tWW-cSS-tWH-tSW-cWS-cHW-cSS-cSH-cWH-cHW-cSH-tWH-R-cWW
    • History status: Exact match
    251
    239
    • IL_08815.1
    IL_08815.1
    • Basepair signature: cWW-cSS-cSS-R-cWW
    • History status: Exact match
  • 180 degree turn (1)
  • 61
    240
    • IL_31890.1
    IL_31890.1
    • Basepair signature: cWW-L-R-R-L-L-cWW
    • History status: Exact match
    91
    241
    • IL_42521.1
    IL_42521.1
    • Basepair signature: cWW-L-L-cWW-cWW
    • History status: Exact match
    81
    242
    • IL_53174.1
    IL_53174.1
    • Basepair signature: cWW-L-R-cWW
    • History status: Exact match
    61
    243
    • IL_59724.1
    IL_59724.1
    • Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW
    • History status: Exact match
  • 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)
  • 151
    244
    • IL_76940.1
    IL_76940.1
    • Basepair signature: cWW-L-R-L-L-cWW
    • History status: Exact match
    91
    245
    • IL_12750.1
    IL_12750.1
    • Basepair signature: cWW-L-R-cWW-L-R-R-R-R-L-L-cWW
    • History status: Exact match
    161
    246
    • IL_35058.1
    IL_35058.1
    • Basepair signature: cWW-tSW-L-cWS-tSW-R-R-cWW
    • History status: Exact match
  • Symmetric double minor groove platform (1)
  • 101
    247
    • IL_46461.1
    IL_46461.1
    • Basepair signature: cWW-L-bif-L-cWW-cWW-cWW-L-cWW-tSW-L-L-L-L-L-L-L-L-tHH-tHS-cWW
    • History status: Exact match
    391
    248
    • IL_70480.1
    IL_70480.1
    • Basepair signature: cWW-L-R-L-tHW-L-L-cWW
    • History status: Exact match
    111
    249
    • IL_17765.1
    IL_17765.1
    • Basepair signature: cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW
    • History status: Exact match
    151
    250
    • IL_57631.1
    IL_57631.1
    • Basepair signature: cWW-R-tWH-R-R-R-cWW
    • History status: Exact match
  • Stack outside cWW (1)
  • 101
    251
    • IL_66497.1
    IL_66497.1
    • Basepair signature: cWW-tWH-L-R-tHS-bif-cWW
    • History status: Exact match
    131
    252
    • IL_74353.1
    IL_74353.1
    • Basepair signature: cWW-tSH-tHS-tHS-cWW-cWW
    • History status: Exact match
  • Triple sheared with extra cWW (1)
  • 121
    253
    • IL_85053.1
    IL_85053.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
  • Single bulged G (1)
  • 51
    254
    • IL_94501.1
    IL_94501.1
    • Basepair signature: cWW-cWW-cWW-tHW-cWH-cSH-cWH-cSH-tHS-cWW
    • History status: Exact match
    171
    255
    • IL_32181.1
    IL_32181.1
    • Basepair signature: cWW-cWW-cWW-L-cSW-L-R-R-R-cWW
    • History status: Exact match
    161
    256
    • IL_60171.1
    IL_60171.1
    • Basepair signature: cWW-L-tWH-R-R-R-cWW
    • History status: Exact match
  • Major groove platform; stack outside cWW (1)
  • 91
    257
    • IL_77034.1
    IL_77034.1
    • Basepair signature: cWW-R-R-R-cWW
    • History status: Exact match
  • Multiple bulged bases (1)
  • 71
    258
    • IL_96451.1
    IL_96451.1
    • Basepair signature: cWW-R-cWH-L-L-L-cWW
    • History status: Exact match
    91
    259
    • IL_13394.1
    IL_13394.1
    • Basepair signature: cWW-L-R-R-R-R-tSS-R-R-R-R-R-R-R-R-L-L-L-cWW
    • History status: Exact match
    231
    260
    • IL_22914.1
    IL_22914.1
    • Basepair signature: cWW-L-R-cSW-cWW
    • History status: Exact match
    81
    261
    • IL_46464.1
    IL_46464.1
    • Basepair signature: cWW-R-R-R-R-cWW
    • History status: Exact match
    91
    262
    • IL_63750.1
    IL_63750.1
    • Basepair signature: cWW-tSS-cSS-tWW-L-tSH-R-R-cWW
    • History status: Exact match
    131
    263
    • IL_91920.1
    IL_91920.1
    • Basepair signature: cWW-cWW-tHH-cWW
    • History status: Exact match
    91
    264
    • IL_99403.1
    IL_99403.1
    • Basepair signature: cWW-cWW-L-L-cWW
    • History status: Exact match
    91
    265
    • IL_17971.1
    IL_17971.1
    • Basepair signature: cWW-tWW-L-tWW-L-cWW
    • History status: Exact match
    141
    266
    • IL_38969.1
    IL_38969.1
    • Basepair signature: cWW-L-R-L-L-L-L-L-cWW
    • History status: Exact match
    121
    267
    • IL_50789.1
    IL_50789.1
    • Basepair signature: cWW-L-L-L-cWW
    • History status: Exact match
    81
    268
    • IL_74719.1
    IL_74719.1
    • Basepair signature: cWW-tSH-tHS-cWW
    • History status: Exact match
  • Double sheared (1)
  • 91
    269
    • IL_85630.1
    IL_85630.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW
    • History status: Exact match
    151
    270
    • IL_20245.1
    IL_20245.1
    • Basepair signature: cWW-L-R-R-R-R-L-L-L-L-L-L-L-L-L-L-L-L-cWW-L-R-cWW
    • History status: Exact match
    251
    271
    • IL_33557.1
    IL_33557.1
    • Basepair signature: cWW-cWW-tHH-L-R-R-R-L-L-L-cWW
    • History status: Exact match
    151
    272
    • IL_43754.1
    IL_43754.1
    • Basepair signature: cWW-L-R-cSW-cSH-cWW
    • History status: Exact match
    91
    273
    • IL_69091.1
    IL_69091.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW
    • History status: Exact match
    171
    274
    • IL_77771.1
    IL_77771.1
    • Basepair signature: cWW-L-L-cWW
    • History status: Exact match
    61
    275
    • IL_89055.1
    IL_89055.1
    • Basepair signature: cWW-cWW-L-R-R-L-L-L-L-L-cWW-cWW
    • History status: Exact match
    181
    276
    • IL_46732.1
    IL_46732.1
    • Basepair signature: cWW-R-R-tHS-cWW
    • History status: Exact match
    91
    277
    • IL_55786.1
    IL_55786.1
    • Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
    • History status: Exact match
    231
    278
    • IL_64842.1
    IL_64842.1
    • Basepair signature: cWW-L-L-L-tWH-cSH-cWW
    • History status: Exact match
    111
    279
    • IL_70801.1
    IL_70801.1
    • Basepair signature: cWW-L-R-R-tWW-cWW-cWW-cWW
    • History status: Exact match
    131
    280
    • IL_92343.1
    IL_92343.1
    • Basepair signature: cWW-L-R-R-R-L-L-cWW
    • History status: Exact match
    101
    281
    • IL_99645.1
    IL_99645.1
    • Basepair signature: cWW-cWW
    • History status: Exact match
    51
    282
    • IL_06300.1
    IL_06300.1
    • Basepair signature: cWW-tSH-L-R-L-cWW
    • History status: Exact match
    91
    283
    • IL_39287.1
    IL_39287.1
    • Basepair signature: cWW-tSH-tHS-tSS-L-R-R-R-R-R-cWW
    • History status: Exact match
    171
    284
    • IL_74736.1
    IL_74736.1
    • Basepair signature: cWW-tSH-L-R-R-L-cWW
    • History status: Exact match
    111
    285
    • IL_94667.1
    IL_94667.1
    • Basepair signature: cWW-bif-L-cWW
    • History status: Exact match
    81
    286
    • IL_00559.1
    IL_00559.1
    • Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-cWW-cWW
    • History status: Exact match
    201
    287
    • IL_09374.1
    IL_09374.1
    • Basepair signature: cWW-L-L-L-L-L-L-cWW
    • History status: Exact match
    101
    288
    • IL_20463.1
    IL_20463.1
    • Basepair signature: cWW-L-R-R-R-cWH-R-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)
  • 181
    289
    • IL_89193.1
    IL_89193.1
    • Basepair signature: cWW-L-R-R-cSH-tWH-tHS-cWW
    • History status: Exact match
  • 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)
  • 121
    290
    • IL_96860.1
    IL_96860.1
    • Basepair signature: cWW-cWW-cWH-L-cWW-cWW
    • History status: Exact match
    101
    291
    • IL_03420.1
    IL_03420.1
    • Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW
    • History status: Exact match
    141
    292
    • IL_14397.1
    IL_14397.1
    • Basepair signature: cWW-tWH-tHH-tHS-cWW
    • History status: Exact match
    111
    293
    • IL_55896.1
    IL_55896.1
    • Basepair signature: cWW-tSH-tHS-tWS-cWW
    • History status: Exact match
  • tSH-tHS-tWS (1)
  • 101
    294
    • IL_28564.1
    IL_28564.1
    • Basepair signature: cWW-L-R-cWW-cWW
    • History status: Exact match
    81
    295
    • IL_51101.1
    IL_51101.1
    • Basepair signature: cWW-R-cWW
    • History status: Exact match
    51
    296
    • IL_58390.1
    IL_58390.1
    • Basepair signature: cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW
    • History status: Exact match
    141
    297
    • IL_85931.1
    IL_85931.1
    • Basepair signature: cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW
    • History status: Exact match
    141
    298
    • IL_94878.1
    IL_94878.1
    • Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
    • History status: Exact match
    281
    299
    • IL_09572.1
    IL_09572.1
    • Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    131
    300
    • IL_20549.1
    IL_20549.1
    • Basepair signature: cWW-tWH-cSH-cWW
    • History status: Exact match
  • Receptor of 11-nt loop-receptor motif (1)
  • 91
    301
    • IL_44325.1
    IL_44325.1
    • Basepair signature: cWW-cWH-R-cWW
    • History status: Exact match
    81
    302
    • IL_53529.1
    IL_53529.1
    • Basepair signature: cWW-L-cWH-R-R-cWW
    • History status: Exact match
    81
    303
    • IL_61242.1
    IL_61242.1
    • Basepair signature: cWW-cWW-L-R-cWW-cWW
    • History status: Exact match
    101
    304
    • IL_69457.1
    IL_69457.1
    • Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW
    • History status: Exact match
    131
    305
    • IL_89836.1
    IL_89836.1
    • Basepair signature: cWW-tSH-R-tHH-tHS-cWW
    • History status: Exact match
    121
    306
    • IL_96942.1
    IL_96942.1
    • Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW
    • History status: Exact match
    151
    307
    • IL_03470.1
    IL_03470.1
    • Basepair signature: cWW-R-R-R-cWW
    • History status: Exact match
    81
    308
    • IL_23735.1
    IL_23735.1
    • Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW
    • History status: Exact match
    261
    309
    • IL_36582.1
    IL_36582.1
    • Basepair signature: cWW-L-R-L-tHH-L-tWH-tHS-cWW
    • History status: Exact match
  • 8x6 Sarcin-Ricin with inserted A; G-bulge (1)
  • 141
    310
    • IL_47108.1
    IL_47108.1
    • Basepair signature: cWW-tHH-L-R-R-R-cWW
    • History status: Exact match
    101
    311
    • IL_82988.1
    IL_82988.1
    • Basepair signature: cWW-cWW-L-L-tHS-cWW
    • History status: Exact match
    101
    312
    • IL_93094.1
    IL_93094.1
    • Basepair signature: cWW-tSH-tHH-R-R-R-cWW
    • History status: Exact match
  • Reverse kink-turn (1)
  • 111
    313
    • IL_07097.1
    IL_07097.1
    • Basepair signature: cWW-L-R-R-cWW-L-L-L-L-L-cWW
    • History status: Exact match
    161
    314
    • IL_19023.1
    IL_19023.1
    • Basepair signature: cWW-cHW-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    141
    315
    • IL_29509.1
    IL_29509.1
    • Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
    • History status: Exact match
    151
    316
    • IL_51191.1
    IL_51191.1
    • Basepair signature: cWW-L-R-R-R-R-cWW
    • History status: Exact match
    101
    317
    • IL_67834.1
    IL_67834.1
    • Basepair signature: cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW
    • History status: Exact match
    241
    318
    • IL_75330.1
    IL_75330.1
    • Basepair signature: cWW-R-R-cWW
    • History status: Exact match
    71
    319
    • IL_21121.1
    IL_21121.1
    • Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW
    • History status: Exact match
    121
    320
    • IL_45257.1
    IL_45257.1
    • Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW
    • History status: Exact match
    151
    321
    • IL_79670.1
    IL_79670.1
    • Basepair signature: cWW-L-R-cWW-cWW-cWW
    • History status: Exact match
    101
    322
    • IL_90157.1
    IL_90157.1
    • Basepair signature: cWW-L-L-L-L-tHH-cWS-cWW
    • History status: Exact match
    121
    323
    • IL_97253.1
    IL_97253.1
    • Basepair signature: cWW-L-R-R-R-R-R-R-R-L-L-cWW
    • History status: Exact match
    141
    324
    • IL_15978.1
    IL_15978.1
    • Basepair signature: cWW-R-cSW-R-R-tHS-cWW
    • History status: Exact match
    131
    325
    • IL_36740.1
    IL_36740.1
    • Basepair signature: cWW-cWW-R-cWW
    • History status: Exact match
    71
    326
    • IL_56105.1
    IL_56105.1
    • Basepair signature: cWW-tHS-cSH-tHS-cWW
    • History status: Exact match
    81
    327
    • IL_65055.1
    IL_65055.1
    • Basepair signature: cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW
    • History status: Exact match
    261
    328
    • IL_93270.1
    IL_93270.1
    • Basepair signature: cWW-L-L-cWS-cWW
    • History status: Exact match
  • Minor groove platform (1)
  • 71
    329
    • IL_07262.1
    IL_07262.1
    • Basepair signature: cWW-cWW-cWW
    • History status: Exact match
    61
    330
    • IL_19048.1
    IL_19048.1
    • Basepair signature: cWW-bif-bif-L-L-cSW-cWW-cSH-R-cWW
    • History status: Exact match
    151
    331
    • IL_58819.1
    IL_58819.1
    • Basepair signature: cWW-L-R-R-tWH-L-tSS-tHW-R-tHH-cWW-cWW
    • History status: Exact match
    171
    332
    • IL_86964.1
    IL_86964.1
    • Basepair signature: cWW-cSH-cWW
    • History status: Exact match
  • Minor groove platform with intercalation (1)
  • 71

    Coloring options:


    Exact match 331; Updated, 1 parent 1;