Internal Loop Motif Atlas Release 3.66

#	Motif	Num Nts	Instances
1	IL_01312.13 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (15) UU cWW (8) Isolated cWH basepair (7) Intercalated tWH (4) CC cWW (4) CA cWW (3) Isolated near basepair (2) AA cWW (2) Self complementary (2) Single bulged G, near cWW (2) Intercalated cWW (1) Multiple bulged bases, near cWW (1) Isolated cWS basepair (1) CA cWW with bulged A (1) Decoding loop related (1) UU cWW water inserted (1) UG cWW (1) UC cWW (1)	6	266
2	IL_80007.16 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged A (83) Major groove intercalation (1)	4	84
3	IL_83039.11 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged U (75)	4	75
4	IL_85877.9 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (61) Non canonical cWW and near pair (2)	8	63
5	IL_13730.12 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (34) Major groove outside cWW, minor groove, intercalation pocket (9) Stack outside cWW (4) Basepair outside cWW (3) Major groove platform outside cWW (2) Major groove platform (1)	4	53
6	IL_80663.10 View exemplar Basepair signature: cWW-tHS-cSH-cWW History status: Exact match Major groove platform (34) Major groove platform; stack outside cWW (11) Major groove intercalation (1)	5	46
7	IL_06437.11 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: Exact match Minor groove platform (41) Single stack bend (2) Single bulged A (1) Major groove outside cWW, minor groove, intercalation pocket (1)	5	45
8	IL_04038.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single stack bend (28) Decoding loop related (12) Stack and bulge (2) Intercalated cWW (2) Not an internal loop (1)	5	45
9	IL_42589.6 View exemplar Basepair signature: cWW-cHW-cWW History status: Exact match Isolated cWH basepair (34) Isolated near basepair (4) Self complementary (2) Isolated non-canonical cWW with bulges (2) CC cWW (1)	6	43
10	IL_56467.6 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: Exact match Triple sheared (28) AAA cross-strand stack (5) Other IL (1)	10	34
11	IL_61258.10 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged C (33)	4	33
12	IL_29549.9 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW History status: Exact match Kink-turn (27) Kink-turn with non-sequential stacking (5)	12	32
13	IL_59137.10 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (30)	4	30
14	IL_09705.7 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (24) Other IL (2) tWS-tSW (1)	8	27
15	IL_63596.4 View exemplar Basepair signature: cWW-tWH-cSH-L-cWS-cWW History status: Exact match C-loop (21)	7	21
16	IL_53523.5 View exemplar Basepair signature: cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN (17) UAA/GAN related (1)	9	18
17	IL_09061.4 View exemplar Basepair signature: cWW-cSW-cWW History status: Exact match Major groove minor groove platform; mini C-loop (15) Major groove outside cWW, minor groove, intercalation pocket (3)	6	18
18	IL_70995.6 View exemplar Basepair signature: cWW-tSH-L-cWW History status: Exact match Major groove platform; stack outside cWW (16)	6	16
19	IL_39521.5 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Exact match tSH-tHW-tHS (16)	10	16
20	IL_04346.5 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (14)	15	14
21	IL_95485.6 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Major groove platform with extra cWW (10) Isolated basepair with bulged bases (3)	7	13
22	IL_08757.3 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (11) Other IL (2)	8	13
23	IL_38958.6 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated tHS basepair with bulges (13)	6	13
24	IL_35110.5 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (8) Sarcin-Ricin target in LSU H95; G-bulge (5)	13	13
25	IL_67621.5 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match Isolated cWS basepair (11) Other IL (1)	6	12
26	IL_15861.6 View exemplar Basepair signature: cWW-L-L-L-cSH-L-cWW History status: Exact match SSU/LSU pseudoknot (10)	10	10
27	IL_72766.2 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Basepair outside cWW, intercalation pocket (5) Single stack bend (2) Major groove outside cWW, intercalation pocket (1) Major groove outside cWW, minor groove, intercalation pocket (1) Intercalation pocket (1)	5	10
28	IL_97601.6 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (8) 8-nt loop receptor (2)	8	10
29	IL_87332.1 View exemplar Basepair signature: cWW-cWW-R-cWW History status: Exact match Minor groove platform with extra cWW (5)	7	10
30	IL_87630.5 View exemplar Basepair signature: cWW-tSH-cSH-cWW History status: Exact match Major groove platform with extra pair (9) Other IL (1)	7	10
31	IL_94431.4 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: Exact match Minor groove platform (10)	6	10
32	IL_58764.1 View exemplar Basepair signature: cWW-L-R-R-cWW-cWW History status: Exact match Minor groove platform related (3) Multiple bulged bases with non-canonical cWW (1) UAA/GAN variation (1) Decoding loop related (1)	9	9
33	IL_95601.1 View exemplar Basepair signature: cWW-tSH-cWW History status: Exact match Minor groove platform with intercalation (6) Intercalated tWH (1) Major groove platform (1) Minor groove platform (1)	5	9
34	IL_69632.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (6)	4	9
35	IL_19389.4 View exemplar Basepair signature: cWW-L-cSH-cWW History status: Exact match Major groove platform with intercalated tWH (5) Left turn (3) Other IL (1)	6	9
36	IL_34907.2 View exemplar Basepair signature: cWW-R-tWH-L-tHS-cWW History status: Exact match tSH-tHS-tHW (3) UAA/GAN with extra pair (3) UAA/GAN (3)	10	9
37	IL_81389.2 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: Exact match UAA/GAN related (5) UAA/GAN variation (4)	9	9
38	IL_76308.3 View exemplar Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS-cWW (5) Tandem non-canonical cWW pairs with near WC pairs (2) Other IL (1)	12	8
39	IL_54997.5 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (7) Decoding loop with one bulged A (1)	6	8
40	IL_31836.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Major groove outside cWW, minor groove, intercalation pocket (3) Not an internal loop (2) Single stack bend (1) Other IL (1) Single stack bend with bulge (1)	5	8
41	IL_50676.5 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (5) Pseudoknot (3)	8	8
42	IL_21340.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged U (7)	4	7
43	IL_19222.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (3)	4	7
44	IL_96042.4 View exemplar Basepair signature: cWW-cWW-cSH-R-cWW History status: Exact match Major groove minor groove platform with extra cWW (7)	8	7
45	IL_58103.5 View exemplar Basepair signature: cWW-L-L-cWS-tSW-cWW History status: Exact match Symmetric double minor groove platform (6) Minor groove platform (1)	8	7
46	IL_66584.5 View exemplar Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW History status: Exact match tSH-tSH-tHH-tHS (5) Quadruple sheared (2)	12	7
47	IL_51087.2 View exemplar Basepair signature: cWW-L-R-R-R-L-cWW History status: Exact match Major groove platform with intercalation (1) Multiple bulged bases with near cWW (1)	9	6
48	IL_40508.4 View exemplar Basepair signature: cWW-cWW History status: Exact match Major groove intercalation (3) Single bulged A (3)	4	6
49	IL_51265.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW History status: Exact match Kink-turn from U4 (5) Kink-turn from T-box riboswitch (1)	10	6
50	IL_56455.3 View exemplar Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW History status: Exact match Bacterial 5S Loop E (6)	18	6
51	IL_66414.5 View exemplar Basepair signature: cWW-cWW-tSH-tHS-tHS-L-R-cWW History status: Exact match Triple sheared with non-canonical cWW (6)	14	6
52	IL_02060.4 View exemplar Basepair signature: cWW-cHH-cWW History status: Exact match Major groove platform (4) Multiple bulged bases (1) Major groove intercalation (1)	5	6
53	IL_17470.5 View exemplar Basepair signature: cWW-R-tHW-tHW-tWW-cWW History status: Exact match tHW-tHW cross-strand stack (3)	11	6
54	IL_49767.4 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN with extra cWW (5) Other IL (1)	11	6
55	IL_55456.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (6)	6	6
56	IL_90991.5 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (6)	4	6
57	IL_60695.6 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	5
58	IL_23544.2 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	5
59	IL_60992.5 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW History status: Exact match	16	5
60	IL_55953.2 View exemplar Basepair signature: cWW-tSH-R-tHS-L-bif-cWW History status: Exact match	12	5
61	IL_34626.4 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	5
62	IL_90538.3 View exemplar Basepair signature: cWW-cSS-tSS-L-tSH-tSS-tHS-L-bif-cWW History status: Exact match Kink-turn (5)	13	5
63	IL_17069.3 View exemplar Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW History status: Exact match Kink-turn related (5)	13	5
64	IL_08376.2 View exemplar Basepair signature: cWW-tWH-tSW-L-cWW History status: Exact match C-loop (5)	7	5
65	IL_12566.2 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW History status: Exact match	9	5
66	IL_57188.3 View exemplar Basepair signature: cWW-tWW-cSH-L-tWW-cSH-cWW History status: Exact match	11	5
67	IL_02284.3 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	5
68	IL_98882.3 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Decoding loop related (2) Intercalated tWH (1)	5	5
69	IL_05922.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match	7	5
70	IL_94518.4 View exemplar Basepair signature: cWW-bif-cWW-cWW-cWW-cWW History status: Exact match	12	5
71	IL_67474.3 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	4
72	IL_47154.5 View exemplar Basepair signature: cWW-cSW-tHS-cWW History status: Exact match	8	4
73	IL_75461.2 View exemplar Basepair signature: cWW-cSS-L-R-R-cWW History status: Exact match	7	4
74	IL_72938.1 View exemplar Basepair signature: cWW-cWW-cSH-cSH-tHS-cWW History status: Exact match 8-nt loop receptor (3) Other IL (1)	8	4
75	IL_68506.1 View exemplar Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-R-cWW-cWW History status: Exact match	19	4
76	IL_54678.3 View exemplar Basepair signature: cWW-cWW History status: Exact match Other IL (1)	4	4
77	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-L-L-L-bif-cWW History status: Exact match Reverse turn (4)	12	4
78	IL_83162.3 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: Exact match	11	4
79	IL_08296.3 View exemplar Basepair signature: cWW-tSH-R-R-cWW History status: Exact match	8	4
80	IL_45944.2 View exemplar Basepair signature: cWW-L-L-tWH-L-L-L-cWW History status: Exact match	11	4
81	IL_34915.2 View exemplar Basepair signature: cWW-R-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (4)	9	4
82	IL_66450.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (2) Single bulged A (2)	4	4
83	IL_05867.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW-cWW History status: Exact match	10	4
84	IL_19954.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW History status: Exact match	12	4
85	IL_68780.2 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW History status: Exact match Kink-turn (3)	12	4
86	IL_00512.1 View exemplar Basepair signature: cWW-L-R-tWW-cWW History status: Exact match tWW and near cWH (1) tWW and non-canonical cWW (1) Tandem non-canonical cWW pairs (1)	8	3
87	IL_09129.1 View exemplar Basepair signature: cWW-tWH-tWH-L-R-L-tWW-cWW History status: Exact match	13	3
88	IL_35904.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW History status: Exact match Kink-turn (3)	12	3
89	IL_33812.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-cWW History status: Exact match	10	3
90	IL_69440.1 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: Exact match	8	3
91	IL_39512.1 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	3
92	IL_75283.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW History status: Exact match	18	3
93	IL_64900.1 View exemplar Basepair signature: cWW-cWW-tSS-L-tSH-tHS-tHS-cWW History status: Exact match Kink-turn (3)	14	3
94	IL_71960.4 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Minor groove platform (2) Single bulged A (1)	5	3
95	IL_69507.1 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Minor groove platform (3)	5	3
96	IL_68057.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW History status: Exact match Kink-turn (3)	12	3
97	IL_09768.1 View exemplar Basepair signature: cWW-R-tHS-tSH-cWW History status: Exact match Minor groove platform with extra cWW (1)	8	3
98	IL_83121.7 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single base bend (1)	5	3
99	IL_07931.5 View exemplar Basepair signature: cWW-cWW-R-cWW History status: Exact match	7	3
100	IL_58960.1 View exemplar Basepair signature: cWW-L-L-tWW-L-L-L-cWW History status: Exact match	11	3
101	IL_76195.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	3
102	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (3)	12	3
103	IL_09907.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Decoding loop related (1)	7	3
104	IL_65851.1 View exemplar Basepair signature: cWW-L-R-R-L-tHW-L-cWW-cWW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	14	3
105	IL_93830.2 View exemplar Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)	14	3
106	IL_68574.2 View exemplar Basepair signature: cWW-tSH-tHH-cWW History status: Exact match	8	3
107	IL_24606.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)	14	3
108	IL_74051.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-L-cWW History status: Exact match Kink-turn (1)	11	3
109	IL_05265.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (1)	6	3
110	IL_19569.2 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: Exact match	8	3
111	IL_26785.1 View exemplar Basepair signature: cWW-cWW-L-R-R-tSH-tHW-cSH-tHH-tHS-cWW History status: Exact match 10x8 Sarcin-Ricin; G-bulge (3)	18	3
112	IL_87880.2 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	3
113	IL_27393.6 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	3
114	IL_88269.2 View exemplar Basepair signature: cWW-tSH-tHW-L-cSH-R-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (3)	11	3
115	IL_02349.4 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (2)	13	3
116	IL_96596.1 View exemplar Basepair signature: cWW-tSH-tHW-L-R-cWW-cWW History status: Exact match	12	2
117	IL_02413.1 View exemplar Basepair signature: cWW-L-R-L-L-cWW History status: Exact match	8	2
118	IL_81522.1 View exemplar Basepair signature: cWW-cSH-L-cWS-cWW History status: Exact match Major groove minor groove platform with intercalation; mini C-loop (2)	7	2
119	IL_18472.1 View exemplar Basepair signature: cWW-R-tSW-R-tSW-L-L-cWW History status: Exact match	11	2
120	IL_28060.3 View exemplar Basepair signature: cWW-tHH-L-cWS-R-cWW History status: Exact match Major groove minor groove platform with tHH (2)	8	2
121	IL_58346.1 View exemplar Basepair signature: cWW-cSH-R-R-R-L-cWW-cWW History status: Exact match	11	2
122	IL_44093.1 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	2
123	IL_53528.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	13	2
124	IL_77870.1 View exemplar Basepair signature: cWW-bif-L-L-L-tHS-cWW-cWW History status: Exact match	13	2
125	IL_23663.4 View exemplar Basepair signature: cWW-cWW-cSH-cWW History status: Exact match	7	2
126	IL_36143.2 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	5	2
127	IL_47002.1 View exemplar Basepair signature: cWW-tSH-L-L-tHH-cWW History status: Exact match	10	2
128	IL_64879.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Triple sheared related (2)	11	2
129	IL_82426.3 View exemplar Basepair signature: cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW History status: Exact match	14	2
130	IL_92440.5 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (2)	14	2
131	IL_18894.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Quadruple sheared (2)	12	2
132	IL_01206.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	2
133	IL_34470.1 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)	17	2
134	IL_79393.8 View exemplar Basepair signature: cWW-cWW-tSH-R-R-R-cWW History status: Exact match	11	2
135	IL_86428.1 View exemplar Basepair signature: cWW-tHW-cWW-L-cSH-R-tHS-cWW-cWW History status: Exact match	12	2
136	IL_34535.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match Isolated near basepair (1)	6	2
137	IL_53581.1 View exemplar Basepair signature: cWW-tWW-L-tWH-tWH-tWH-tSS-L-L-L-bif-cWW-tSS-cSS-R-R-cWW History status: Exact match Kink-turn related (2)	22	2
138	IL_23836.1 View exemplar Basepair signature: cWW-tHW-tHS-cWW-cWW History status: Exact match	10	2
139	IL_45289.1 View exemplar Basepair signature: cWW-bif-cSH-cSW-cWW-cWW History status: Exact match	8	2
140	IL_16456.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-tSS-R-cWW History status: Exact match Kink-turn (2)	11	2
141	IL_36973.5 View exemplar Basepair signature: cWW-tSH-L-R-R-R-L-L-cWW-cWW History status: Exact match	14	2
142	IL_51590.1 View exemplar Basepair signature: cWW-cSH-tWH-cSH-cWW-cWW History status: Exact match Other IL (1) C-loop with extra cWW pair (1)	9	2
143	IL_95688.1 View exemplar Basepair signature: cWW-L-cSS-cSS-L-R-cWW History status: Exact match	11	2
144	IL_73705.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (2)	8	2
145	IL_30542.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	2
146	IL_01759.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match Tandem non-canonical cWW pairs (1)	6	2
147	IL_37722.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-tHS-tSS-R-cWW History status: Exact match Kink-turn (1)	14	2
148	IL_48280.2 View exemplar Basepair signature: cWW-L-tHS-cWW History status: Exact match	7	2
149	IL_83354.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (2)	10	2
150	IL_19557.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	2
151	IL_42032.1 View exemplar Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW History status: Exact match	11	2
152	IL_52451.10 View exemplar Basepair signature: cWW-cWW-cWH-cWW History status: Exact match	8	2
153	IL_76386.1 View exemplar Basepair signature: cWW-L-R-L-cWW-cWW-cWW History status: Exact match	11	2
154	IL_12418.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	2
155	IL_22615.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW History status: Exact match	22	2
156	IL_24905.8 View exemplar Basepair signature: cWW-cSW-R-cWW History status: Exact match	7	2
157	IL_59423.1 View exemplar Basepair signature: cWW-L-R-R-tHS-cWW History status: Exact match	9	2
158	IL_70285.1 View exemplar Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW History status: Exact match	13	2
159	IL_05523.1 View exemplar Basepair signature: cWW-L-R-cWW-cSW-cSH-cWW History status: Exact match	10	2
160	IL_38634.5 View exemplar Basepair signature: cWW-cWH-tWS-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	2
161	IL_19724.1 View exemplar Basepair signature: cWW-cSH-R-R-cWW History status: Exact match	7	2
162	IL_68722.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Intercalated cWS (1)	5	2
163	IL_22863.1 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match tSH-tHW-tHH-tHS (2)	16	2
164	IL_80884.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-cWW History status: Exact match	10	2
165	IL_53318.1 View exemplar Basepair signature: cWW-cWW-tWH-tSH-tHS-cWW History status: Exact match	10	2
166	IL_55658.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	2
167	IL_70627.1 View exemplar Basepair signature: cWW-R-R-tWH-L-R-cWW History status: Exact match	10	2
168	IL_27900.1 View exemplar Basepair signature: cWW-tSH-cWW History status: Exact match Minor groove platform (1) Multiple bulged bases (1)	5	2
169	IL_20245.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-L-L-L-L-L-L-L-L-L-L-cWW-L-R-cWW History status: Exact match	25	1
170	IL_33557.1 View exemplar Basepair signature: cWW-cWW-tHH-L-R-R-R-L-L-L-cWW History status: Exact match	14	1
171	IL_43754.1 View exemplar Basepair signature: cWW-L-R-cSW-cSH-cWW History status: Exact match	8	1
172	IL_69091.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW History status: Exact match	16	1
173	IL_77771.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	1
174	IL_89055.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-L-L-L-L-cWW-cWW History status: Exact match	16	1
175	IL_46732.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	1
176	IL_55786.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW History status: Exact match	20	1
177	IL_64842.1 View exemplar Basepair signature: cWW-L-L-L-tWH-cSH-cWW History status: Exact match	10	1
178	IL_70801.1 View exemplar Basepair signature: cWW-L-R-R-tWW-cWW-cWW-cWW History status: Exact match	13	1
179	IL_92343.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cWW History status: Exact match	10	1
180	IL_99645.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (1)	4	1
181	IL_06300.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: Exact match	9	1
182	IL_39287.1 View exemplar Basepair signature: cWW-tSH-tHS-tSS-L-R-R-R-R-R-cWW History status: Exact match	15	1
183	IL_74736.1 View exemplar Basepair signature: cWW-tSH-L-R-R-L-cWW History status: Exact match	9	1
184	IL_94667.1 View exemplar Basepair signature: cWW-bif-L-cWW History status: Exact match	7	1
185	IL_00559.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-cWW-cWW History status: Exact match	19	1
186	IL_09374.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	1
187	IL_20463.1 View exemplar Basepair signature: cWW-L-R-R-R-cWH-R-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
188	IL_89193.1 View exemplar Basepair signature: cWW-L-R-R-cSH-tWH-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)	12	1
189	IL_96860.1 View exemplar Basepair signature: cWW-cWW-cWH-L-cWW-cWW History status: Exact match	10	1
190	IL_03420.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW History status: Exact match	13	1
191	IL_14397.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	1
192	IL_55896.1 View exemplar Basepair signature: cWW-tSH-tHS-tWS-cWW History status: Exact match tSH-tHS-tWS (1)	10	1
193	IL_28564.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: Exact match	8	1
194	IL_51101.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	5	1
195	IL_58390.1 View exemplar Basepair signature: cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW History status: Exact match	14	1
196	IL_85931.1 View exemplar Basepair signature: cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW History status: Exact match	13	1
197	IL_94878.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	26	1
198	IL_09572.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	13	1
199	IL_20549.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (1)	8	1
200	IL_44325.1 View exemplar Basepair signature: cWW-cWH-R-cWW History status: Exact match	6	1
201	IL_53529.1 View exemplar Basepair signature: cWW-L-cWH-R-R-cWW History status: Exact match	8	1
202	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW-cWW History status: Exact match	10	1
203	IL_69457.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	13	1
204	IL_89836.1 View exemplar Basepair signature: cWW-tSH-R-tHH-tHS-cWW History status: Exact match	11	1
205	IL_96942.1 View exemplar Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW History status: Exact match	14	1
206	IL_03470.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
207	IL_23735.1 View exemplar Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW History status: Exact match	26	1
208	IL_36582.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted A; G-bulge (1)	14	1
209	IL_47108.1 View exemplar Basepair signature: cWW-tHH-L-R-R-R-cWW History status: Exact match	10	1
210	IL_82988.1 View exemplar Basepair signature: cWW-cWW-L-L-tHS-cWW History status: Exact match	10	1
211	IL_93094.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-cWW History status: Exact match Reverse kink-turn (1)	11	1
212	IL_07097.1 View exemplar Basepair signature: cWW-L-R-R-cWW-L-L-L-L-L-cWW History status: Exact match	14	1
213	IL_19023.1 View exemplar Basepair signature: cWW-cHW-L-L-L-L-L-L-L-L-cWW History status: Exact match	14	1
214	IL_29509.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match	15	1
215	IL_51191.1 View exemplar Basepair signature: cWW-L-R-R-R-R-cWW History status: Exact match	9	1
216	IL_67834.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW History status: Exact match	24	1
217	IL_75330.1 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	1
218	IL_21121.1 View exemplar Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW History status: Exact match	11	1
219	IL_45257.1 View exemplar Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW History status: Exact match	14	1
220	IL_79670.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW-cWW History status: Exact match	10	1
221	IL_90157.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWS-cWW History status: Exact match	12	1
222	IL_97253.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-R-R-L-L-cWW History status: Exact match	14	1
223	IL_15978.1 View exemplar Basepair signature: cWW-R-cSW-R-R-tHS-cWW History status: Exact match	11	1
224	IL_36740.1 View exemplar Basepair signature: cWW-cWW-R-cWW History status: Exact match	7	1
225	IL_56105.1 View exemplar Basepair signature: cWW-tHS-cSH-tHS-cWW History status: Exact match	8	1
226	IL_65055.1 View exemplar Basepair signature: cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	23	1
227	IL_93270.1 View exemplar Basepair signature: cWW-L-L-cWS-cWW History status: Exact match Minor groove platform (1)	7	1
228	IL_07262.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	1
229	IL_19048.1 View exemplar Basepair signature: cWW-bif-bif-L-L-cSW-cWW-cSH-R-cWW History status: Exact match	14	1
230	IL_58819.1 View exemplar Basepair signature: cWW-L-R-R-tWH-L-tSS-tHW-R-tHH-cWW-cWW History status: Exact match	17	1
231	IL_86964.1 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Minor groove platform with intercalation (1)	5	1
232	IL_01502.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW History status: Exact match	13	1
233	IL_34590.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
234	IL_54670.1 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Exact match	12	1
235	IL_61275.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match	8	1
236	IL_69573.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-R-R-R-L-L-tWW-cWW History status: Exact match	17	1
237	IL_90346.1 View exemplar Basepair signature: cWW-L-R-R-R-R-cWW History status: Exact match	9	1
238	IL_23934.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: Exact match tSH-tHW (1)	9	1
239	IL_47743.1 View exemplar Basepair signature: cWW-cSW-tWH-cSH-L-cWS-cWW History status: Exact match	9	1
240	IL_65320.1 View exemplar Basepair signature: cWW-L-R-R-R-L-tHW-L-R-R-L-cWW History status: Exact match	15	1
241	IL_93585.1 View exemplar Basepair signature: cWW-L-L-L-tWH-cSH-L-cWW-cWW History status: Exact match	11	1
242	IL_29821.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: Exact match	10	1
243	IL_41414.1 View exemplar Basepair signature: cWW-cWW-R-R-cSH-R-bif-tWH-R-R-R-R-cWS-cWW History status: Exact match	21	1
244	IL_01560.1 View exemplar Basepair signature: cWW-L-L-L-cSH-L-L-cWW History status: Exact match	11	1
245	IL_21570.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: Exact match	8	1
246	IL_45481.1 View exemplar Basepair signature: cWW-L-R-cHW-L-L-tSW-L-cWW History status: Exact match	13	1
247	IL_61300.1 View exemplar Basepair signature: cWW-cSS-L-tHW-tSS-L-L-L-L-L-L-cWW History status: Exact match	14	1
248	IL_80355.1 View exemplar Basepair signature: cWW-tWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	23	1
249	IL_90348.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
250	IL_04667.1 View exemplar Basepair signature: cWW-tWH-cSW-L-R-R-L-tHS-cWW History status: Exact match	13	1
251	IL_16702.1 View exemplar Basepair signature: cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW History status: Exact match	15	1
252	IL_24106.1 View exemplar Basepair signature: cWW-tSH-tWH-tWH-R-R-R-R-R-R-R-cWW History status: Exact match	17	1
253	IL_37629.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Stack outside cWW (1)	5	1
254	IL_47972.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	1
255	IL_41593.1 View exemplar Basepair signature: cWW-cHW-tHW-tHW-tHW-bif-cWW History status: Exact match	14	1
256	IL_51877.1 View exemplar Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW History status: Exact match	13	1
257	IL_95811.1 View exemplar Basepair signature: cWW-L-L-L-cWW-L-bif-cWW History status: Exact match Vitamin B12 Aptamer (1)	11	1
258	IL_11882.1 View exemplar Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW History status: Exact match	13	1
259	IL_22436.1 View exemplar Basepair signature: cWW-L-cSS-tWH-tHW-cWW-cWW History status: Exact match Kink-turn related (1)	11	1
260	IL_34780.1 View exemplar Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW History status: Exact match Kink-turn (1)	17	1
261	IL_54896.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-tSS-cWW History status: Exact match	12	1
262	IL_61812.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW History status: Exact match 9x8 Sarcin-Ricin; G-bulge (1)	17	1
263	IL_69979.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-L-cWW History status: Exact match	12	1
264	IL_80412.1 View exemplar Basepair signature: cWW-R-R-R-R-R-tWS-cWW History status: Exact match	11	1
265	IL_98353.1 View exemplar Basepair signature: cWW-cWS-L-L-cWW History status: Exact match	8	1
266	IL_04736.1 View exemplar Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW History status: Exact match	12	1
267	IL_56501.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
268	IL_65876.1 View exemplar Basepair signature: cWW-tSH-L-R-R-R-cWW History status: Exact match Kink-turn (1)	10	1
269	IL_94165.1 View exemplar Basepair signature: cWW-L-R-L-tHS-cWW History status: Exact match	9	1
270	IL_31504.1 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW History status: Exact match	18	1
271	IL_59281.1 View exemplar Basepair signature: cWW-cWW-cSW-cSH-cWW History status: Exact match	9	1
272	IL_68633.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW-cWW History status: Exact match 9x7 Sarcin-Ricin with inserted C; G-bulge (1)	16	1
273	IL_95961.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	1
274	IL_01963.1 View exemplar Basepair signature: cWW-L-R-R-R-cSH-cWW History status: Exact match	9	1
275	IL_46112.1 View exemplar Basepair signature: cWW-L-L-L-L-L-cWW History status: Exact match	9	1
276	IL_62654.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	1
277	IL_70096.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match	7	1
278	IL_80617.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
279	IL_90720.1 View exemplar Basepair signature: cWW-L-L-tHS-R-cWW History status: Exact match	9	1
280	IL_98711.1 View exemplar Basepair signature: cWW-tSH-tHW-tWW-cWW History status: Exact match tSH-tHW-tWW (1)	10	1
281	IL_17094.1 View exemplar Basepair signature: cWW-L-L-tWH-L-R-R-L-cWW History status: Exact match	12	1
282	IL_38044.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW History status: Exact match	20	1
283	IL_49655.1 View exemplar Basepair signature: cWW-tWW-L-R-L-L-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	19	1
284	IL_56867.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW History status: Exact match	13	1
285	IL_74184.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHS-cWW History status: Exact match	11	1
286	IL_84315.1 View exemplar Basepair signature: cWW-tHS-cWS-R-tSW-R-R-cWW History status: Exact match	10	1
287	IL_94351.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHS-cWW History status: Exact match	11	1
288	IL_42092.1 View exemplar Basepair signature: cWW-tSH-L-L-L-cWW History status: Exact match Isolated basepair with bulged bases (1)	9	1
289	IL_52729.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWH-cWW History status: Exact match	12	1
290	IL_68674.1 View exemplar Basepair signature: cWW-bif-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)	14	1
291	IL_76900.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW History status: Exact match Kink-turn (1)	12	1
292	IL_87677.1 View exemplar Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	12	1
293	IL_95993.1 View exemplar Basepair signature: cWW-R-tSS-tWW-tWW-cWW History status: Exact match Kink-turn related (1)	11	1
294	IL_22821.1 View exemplar Basepair signature: cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW History status: Exact match Pseudoknot (1)	17	1
295	IL_46401.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWW History status: Exact match	10	1
296	IL_55304.1 View exemplar Basepair signature: cWW-cWW-R-R-cWW History status: Exact match	8	1
297	IL_62827.1 View exemplar Basepair signature: cWW-R-cWH-R-R-R-cWW History status: Exact match cWH basepair with bulged bases (1)	10	1
298	IL_90922.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-tSS-tSS-R-cWW History status: Exact match Kink-turn (1)	12	1
299	IL_98876.1 View exemplar Basepair signature: cWW-cWW-L-R-R-tHW-bif-cWW History status: Exact match	13	1
300	IL_74271.1 View exemplar Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW History status: Exact match	12	1
301	IL_84409.1 View exemplar Basepair signature: cWW-tSS-tHH-tWW-cSS-tWH-tSW-cWS-cHW-cSS-cSH-cWH-cHW-cSH-tWH-R-cWW History status: Exact match	23	1
302	IL_08815.1 View exemplar Basepair signature: cWW-cSS-cSS-R-cWW History status: Exact match 180 degree turn (1)	5	1
303	IL_31890.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cWW History status: Exact match	9	1
304	IL_42521.1 View exemplar Basepair signature: cWW-L-L-cWW-cWW History status: Exact match	8	1
305	IL_53174.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
306	IL_59724.1 View exemplar Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
307	IL_76940.1 View exemplar Basepair signature: cWW-L-R-L-L-cWW History status: Exact match	8	1
308	IL_12750.1 View exemplar Basepair signature: cWW-L-R-cWW-L-R-R-R-R-L-L-cWW History status: Exact match	15	1
309	IL_35058.1 View exemplar Basepair signature: cWW-tSW-L-cWS-tSW-R-R-cWW History status: Exact match Symmetric double minor groove platform (1)	9	1
310	IL_46461.1 View exemplar Basepair signature: cWW-L-bif-L-cWW-cWW-cWW-L-cWW-tSW-L-L-L-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	31	1
311	IL_70480.1 View exemplar Basepair signature: cWW-L-R-L-tHW-L-L-cWW History status: Exact match	11	1
312	IL_17765.1 View exemplar Basepair signature: cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW History status: Exact match	14	1
313	IL_57631.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R-cWW History status: Exact match Stack outside cWW (1)	10	1
314	IL_66497.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-bif-cWW History status: Exact match	12	1
315	IL_74353.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW-cWW History status: Exact match Triple sheared with non-canonical cWW (1)	12	1
316	IL_85053.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (1)	4	1
317	IL_94501.1 View exemplar Basepair signature: cWW-cWW-cWW-tHW-cWH-cSH-cWH-cSH-tHS-cWW History status: Exact match	15	1
318	IL_32181.1 View exemplar Basepair signature: cWW-cWW-cWW-L-cSW-L-R-R-R-cWW History status: Exact match	15	1
319	IL_60171.1 View exemplar Basepair signature: cWW-L-tWH-R-R-R-cWW History status: Exact match Major groove platform; stack outside cWW (1)	9	1
320	IL_77034.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match Multiple bulged bases (1)	7	1
321	IL_96451.1 View exemplar Basepair signature: cWW-R-cWH-L-L-L-cWW History status: Exact match	9	1
322	IL_13394.1 View exemplar Basepair signature: cWW-L-R-R-R-R-tSS-R-R-R-R-R-R-R-R-L-L-L-cWW History status: Exact match	22	1
323	IL_22914.1 View exemplar Basepair signature: cWW-L-R-cSW-cWW History status: Exact match Self complementary (1)	8	1
324	IL_46464.1 View exemplar Basepair signature: cWW-R-R-R-R-cWW History status: Exact match	8	1
325	IL_63750.1 View exemplar Basepair signature: cWW-tSS-cSS-tWW-L-tSH-R-R-cWW History status: Exact match	11	1
326	IL_91920.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: Exact match	8	1
327	IL_99403.1 View exemplar Basepair signature: cWW-cWW-L-L-cWW History status: Exact match Isolated non-canonical cWW with bulges (1)	8	1
328	IL_17971.1 View exemplar Basepair signature: cWW-tWW-L-tWW-L-cWW History status: Exact match	10	1
329	IL_38969.1 View exemplar Basepair signature: cWW-L-R-L-L-L-L-L-cWW History status: Exact match	11	1
330	IL_50789.1 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	1
331	IL_74719.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (1)	8	1
332	IL_85630.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW History status: Exact match	15	1

Coloring options:
Nucleotide numbers

Exact match 332;

Internal Loop Motif Atlas Release 3.66 Download Csv Json

Internal Loop Motif Atlas Release 3.66

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