Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6QUL_0011/A/59:68No text annotation
Not in a motif group
homologous
HL_7A0S_001
HL_99167.1
HL_6QUL_0021/A/87:95No text annotation
Not in a motif group
homologous
HL_5J7L_135
HL_84193.1
HL_6QUL_0031/A/123:128No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_75407.1
HL_6QUL_0041/A/137:142No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_6QUL_0051/A/158:168No text annotation
Not in a motif group
homologous
HL_5J7L_138
HL_81820.1
HL_6QUL_0061/A/194:201No text annotation
Not in a motif group
geometric
HL_4WF9_006
HL_06192.2
HL_6QUL_0071/A/225:230No text annotation
Not in a motif group
homologous
HL_5J7L_140
HL_27930.1
HL_6QUL_0081/A/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_6QUL_0091/A/305:312T-loop with 1 bulged base
Not in a motif group
homologous
HL_5J7L_142
HL_89380.2
HL_6QUL_0101/A/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_6QUL_0111/A/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.9
HL_6QUL_0121/A/382:392No text annotation
Not in a motif group
homologous
HL_5J7L_145
HL_91503.4
HL_6QUL_0131/A/410:417No text annotation
Not in a motif group
homologous
HL_7A0S_014
HL_96598.1
HL_6QUL_0141/A/462:467GNRA
Not in a motif group
homologous
HL_4WF9_015
HL_42097.2
HL_6QUL_0151/A/487:493No text annotation
Not in a motif group
homologous
HL_5J7L_148
HL_42097.2
HL_6QUL_0161/A/566:575T-loop with 2 stacked bulged bases
Not in a motif group
geometric
HL_5J7L_150
HL_89380.2
HL_6QUL_0171/A/611:617No text annotation
Not in a motif group
geometric
HL_361D_002
HL_90617.2
HL_6QUL_0181/A/629:634GNRA
Not in a motif group
homologous
HL_5J7L_152
HL_42097.2
HL_6QUL_0191/A/641:647No text annotation
Not in a motif group
homologous
HL_5J7L_153
HL_77805.2
HL_6QUL_0201/A/712:719No text annotation
Not in a motif group
homologous
HL_5J7L_154
HL_84085.2
HL_6QUL_0211/A/744:753No text annotation
Not in a motif group
homologous
HL_4WF9_023
HL_39334.6
HL_6QUL_0221/A/779:785No text annotation
Not in a motif group
homologous
HL_7RQB_024
HL_74322.1
HL_6QUL_0231/A/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_6QUL_0241/A/955:962GNRA
Not in a motif group
homologous
HL_4WF9_027
HL_42097.2
HL_6QUL_0251/A/978:985No text annotation
Not in a motif group
homologous
HL_5J7L_160
HL_64430.2
HL_6QUL_0261/A/1064:1074No text annotation
Not in a motif group
homologous
HL_5J7L_161
HL_07145.1
HL_6QUL_0271/A/1092:1099No text annotation
Not in a motif group
homologous
HL_6PRV_002
HL_84085.2
HL_6QUL_0281/A/1172:1177No text annotation
Not in a motif group
HL_6QUL_0291/A/1222:1227Other HL
Not in a motif group
homologous
HL_5J7L_164
HL_87030.2
HL_6QUL_0301/A/1281:1289T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5J7L_165
HL_89380.2
HL_6QUL_0311/A/1324:1330No text annotation
Not in a motif group
homologous
HL_5J7L_166
HL_46680.1
HL_6QUL_0321/A/1363:1368Other HL
Not in a motif group
homologous
HL_5J7L_167
HL_87030.2
HL_6QUL_0331/A/1389:1398No text annotation
Not in a motif group
homologous
HL_5J7L_168
HL_69023.2
HL_6QUL_0341/A/1451:1459No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6QUL_0351/A/1492:1498No text annotation
Not in a motif group
homologous
HL_5J7L_170
HL_46680.1
HL_6QUL_0361/A/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_6QUL_0371/A/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_6QUL_0381/A/1630:1636GNRA with one bulged base
Not in a motif group
homologous
HL_5J7L_174
HL_42097.2
HL_6QUL_0391/A/1691:1696No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_6QUL_0401/A/1728:1731No text annotation
Not in a motif group
homologous
HL_5J7L_176
HL_98426.1
HL_6QUL_0411/A/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_6QUL_0421/A/1777:1787No text annotation
Not in a motif group
homologous
HL_4WF9_043
HL_43613.5
HL_6QUL_0431/A/1806:1811No text annotation
Not in a motif group
homologous
HL_5J7L_179
HL_42097.2
HL_6QUL_0441/A/1868:1873Other HL
Not in a motif group
homologous
HL_5J7L_180
HL_42097.2
HL_6QUL_0451/A/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_6QUL_0461/A/1949:1957No text annotation
Not in a motif group
homologous
HL_5J7L_182
HL_51824.1
HL_6QUL_0471/A/2027:2036No text annotation
Not in a motif group
homologous
HL_4WF9_047
HL_90642.6
HL_6QUL_0481/A/2209:2215No text annotation
Not in a motif group
homologous
HL_5J7L_185
HL_16845.6
HL_6QUL_0491/A/2248:2256No text annotation
Not in a motif group
homologous
HL_4WF9_049
HL_53171.2
HL_6QUL_0501/A/2264:2276No text annotation
Not in a motif group
homologous
HL_5J7L_187
HL_19870.6
HL_6QUL_0511/A/2303:2313No text annotation
Not in a motif group
homologous
HL_5J7L_188
HL_11805.3
HL_6QUL_0521/A/2324:2331No text annotation
Not in a motif group
homologous
HL_5J7L_189
HL_12078.2
HL_6QUL_0531/A/2356:2361Other HL
Not in a motif group
homologous
HL_5J7L_190
HL_87030.2
HL_6QUL_0541/A/2374:2379No text annotation
Not in a motif group
homologous
HL_7A0S_057
HL_42097.2
HL_6QUL_0551/A/2404:2413No text annotation
Not in a motif group
homologous
HL_5J7L_192
HL_30784.2
HL_6QUL_0561/A/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_6QUL_0571/A/2528:2535No text annotation
Not in a motif group
homologous
HL_5J7L_194
HL_91104.1
HL_6QUL_0581/A/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_6QUL_0591/A/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_6QUL_0601/A/2658:2663GNRA
Not in a motif group
geometric
HL_4V9F_066
HL_42097.2
HL_6QUL_0611/A/2701:2706Ribsomal LSU H95
Not in a motif group
homologous
HL_5J7L_198
HL_46680.1
HL_6QUL_0621/A/2745:2759No text annotation
Not in a motif group
homologous
HL_5J7L_199
HL_56677.7
HL_6QUL_0631/A/2796:2799No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6QUL_0641/A/2819:2827No text annotation
Not in a motif group
homologous
HL_5J7L_201
HL_27930.1
HL_6QUL_0651/A/2856:2861No text annotation
Not in a motif group
homologous
HL_7A0S_068
HL_42097.2
HL_6QUL_0661/B/38:44No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_6QUL_0671/B/86:90No text annotation
Not in a motif group
homologous
HL_5J7L_204
HL_38927.2

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6QUL_0011/A/24:30,
1/A/510:516
Triple sheared with non-canonical cWW
Not in a motif group
geometric
IL_4WF9_001
IL_66414.6
IL_6QUL_0021/A/36:37,
1/A/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.3
IL_6QUL_0031/A/43:44,
1/A/434:436
Minor groove platform
Not in a motif group
homologous
IL_5J7L_247
IL_42622.2
IL_6QUL_0041/A/81:85,
1/A/97:105
No text annotation
Not in a motif group
homologous
IL_5J7L_248
IL_93699.1
IL_6QUL_0051/A/183:184,
1/A/212:214
Single stack bend
Not in a motif group
homologous
IL_5J7L_249
IL_76488.2
IL_6QUL_0061/A/188:194,
1/A/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_250
IL_04346.7
IL_6QUL_0071/A/239:245,
1/A/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_251
IL_76042.2
IL_6QUL_0081/A/269:271,
1/A/366:370
No text annotation
Not in a motif group
homologous
IL_5J7L_252
IL_47972.1
IL_6QUL_0091/A/274:281,
1/A/359:363
No text annotation
Not in a motif group
homologous
IL_5J7L_253
IL_77870.1
IL_6QUL_0101/A/293:295,
1/A/343:347
No text annotation
Not in a motif group
homologous
IL_5J7L_254
IL_69440.1
IL_6QUL_0111/A/481:484,
1/A/496:509
No text annotation
Not in a motif group
geometric
IL_5J7L_255
IL_60992.6
IL_6QUL_0121/A/536:539,
1/A/554:557
Double sheared
Not in a motif group
homologous
IL_5J7L_256
IL_09705.9
IL_6QUL_0131/A/564:566,
1/A/575:577
No text annotation
Not in a motif group
homologous
IL_4WF9_017
IL_95997.1
IL_6QUL_0141/A/606:610,
1/A/618:622
AAA cross-strand stack
Not in a motif group
homologous
IL_5J7L_258
IL_17136.1
IL_6QUL_0151/A/672:674,
1/A/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_95997.1
IL_6QUL_0161/A/674:678,
1/A/799:806
No text annotation
Not in a motif group
geometric
IL_7RQB_018
IL_17470.6
IL_6QUL_0171/A/697:698,
1/A/763:765
Single bulged A
Not in a motif group
geometric
IL_4V9F_025
IL_37497.3
IL_6QUL_0181/A/702:703,
1/A/728:730
Single bulged G
Not in a motif group
homologous
IL_5J7L_262
IL_00225.3
IL_6QUL_0191/A/703:707,
1/A/724:728
Triple sheared
Not in a motif group
geometric
IL_5J7L_263
IL_56467.8
IL_6QUL_0201/A/738:740,
1/A/757:758
Major groove platform
Not in a motif group
homologous
IL_5J7L_264
IL_27635.2
IL_6QUL_0211/A/775:777,
1/A/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_265
IL_90991.6
IL_6QUL_0221/A/844:847,
1/A/933:934
Other IL
Not in a motif group
geometric
IL_5J7L_267
IL_92001.1
IL_6QUL_0231/A/847:848,
1/A/930:933
Stack outside cWW
Not in a motif group
homologous
IL_5J7L_268
IL_37629.1
IL_6QUL_0241/A/850:851,
1/A/926:928
Single stack bend
Not in a motif group
homologous
IL_5J7L_269
IL_76488.2
IL_6QUL_0251/A/856:862,
1/A/915:921
7x7 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
homologous
IL_5J7L_270
IL_93830.3
IL_6QUL_0261/A/862:863,
1/A/913:915
Single bulged G
Not in a motif group
geometric
IL_5J7L_271
IL_00225.3
IL_6QUL_0271/A/864:868,
1/A/909:912
C-loop
Not in a motif group
homologous
IL_5J7L_272
IL_63596.6
IL_6QUL_0281/A/870:872,
1/A/905:907
No text annotation
Not in a motif group
homologous
IL_5J7L_273
IL_95997.1
IL_6QUL_0291/A/875:879,
1/A/898:902
Triple sheared
Not in a motif group
homologous
IL_5J7L_274
IL_56467.8
IL_6QUL_0301/A/879:881,
1/A/895:898
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_1L9A_004
IL_38958.7
IL_6QUL_0311/A/994:996,
1/A/1159:1160
Single bulged C
Not in a motif group
homologous
IL_5J7L_276
IL_61258.12
IL_6QUL_0321/A/998:1002,
1/A/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_5J7L_277
IL_89002.2
IL_6QUL_0331/A/1004:1011,
1/A/1150:1151
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_5J7L_278
IL_15861.7
IL_6QUL_0341/A/1011:1013,
1/A/1149:1150
Single bulged U
Not in a motif group
homologous
IL_5J7L_279
IL_83039.14
IL_6QUL_0351/A/1018:1024,
1/A/1140:1144
No text annotation
Not in a motif group
geometric
IL_5J7L_280
IL_57188.3
IL_6QUL_0361/A/1024:1030,
1/A/1124:1140
No text annotation
Not in a motif group
geometric
IL_5J7L_281
IL_50715.1
IL_6QUL_0371/A/1031:1034,
1/A/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_282
IL_82068.2
IL_6QUL_0381/A/1038:1041,
1/A/1114:1117
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_283
IL_30621.3
IL_6QUL_0391/A/1043:1051,
1/A/1108:1112
Kink-turn
Not in a motif group
homologous
IL_5J7L_284
IL_90538.4
IL_6QUL_0401/A/1059:1062,
1/A/1076:1079
No text annotation
Not in a motif group
homologous
IL_5J7L_285
IL_23544.2
IL_6QUL_0411/A/1087:1091,
1/A/1100:1102
Major groove platform with extra cWW
Not in a motif group
geometric
IL_5D8H_003
IL_05564.2
IL_6QUL_0421/A/1196:1198,
1/A/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_5J7L_286
IL_52767.2
IL_6QUL_0431/A/1202:1206,
1/A/1240:1243
No text annotation
Not in a motif group
homologous
IL_5J7L_287
IL_91920.1
IL_6QUL_0441/A/1208:1215,
1/A/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_6QUL_0451/A/1262:1269,
1/A/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_289
IL_04346.7
IL_6QUL_0461/A/1310:1313,
1/A/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_5J7L_290
IL_50694.2
IL_6QUL_0471/A/1319:1323,
1/A/1331:1333
C-loop
Not in a motif group
homologous
IL_5J7L_291
IL_63596.6
IL_6QUL_0481/A/1351:1355,
1/A/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_5J7L_292
IL_89002.2
IL_6QUL_0491/A/1357:1361,
1/A/1370:1374
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_293
IL_17136.1
IL_6QUL_0501/A/1415:1416,
1/A/1582:1587
No text annotation
Not in a motif group
homologous
IL_5J7L_294
IL_90348.1
IL_6QUL_0511/A/1417:1421,
1/A/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_5J7L_295
IL_89002.2
IL_6QUL_0521/A/1432:1435,
1/A/1557:1561
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5J7L_296
IL_55178.1
IL_6QUL_0531/A/1437:1440,
1/A/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_5J7L_297
IL_04059.1
IL_6QUL_0541/A/1450:1451,
1/A/1459:1461
Single bulged U
Not in a motif group
homologous
IL_5J7L_298
IL_83039.14
IL_6QUL_0551/A/1468:1471,
1/A/1520:1524
No text annotation
Not in a motif group
homologous
IL_5J7L_299
IL_68574.2
IL_6QUL_0561/A/1474:1478,
1/A/1513:1517
tSH-tHW-tHS
Not in a motif group
homologous
IL_5J7L_300
IL_38862.1
IL_6QUL_0571/A/1481:1482,
1/A/1507:1510
No text annotation
Not in a motif group
homologous
IL_5J7L_301
IL_67474.4
IL_6QUL_0581/A/1489:1491,
1/A/1499:1500
Major groove platform
Not in a motif group
geometric
IL_4LFB_024
IL_27635.2
IL_6QUL_0591/A/1526:1529,
1/A/1542:1546
UAA/GAN variation
Not in a motif group
homologous
IL_5J7L_303
IL_07235.1
IL_6QUL_0601/A/1651:1656,
1/A/2004:2006
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_6QUL_0611/A/1663:1665,
1/A/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_4WF9_063
IL_54997.7
IL_6QUL_0621/A/1666:1669,
1/A/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_7RQB_066
IL_50694.2
IL_6QUL_0631/A/1669:1674,
1/A/1990:1993
Intercalated tWH
Not in a motif group
homologous
IL_4WF9_065
IL_82842.2
IL_6QUL_0641/A/1686:1691,
1/A/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_5J7L_308
IL_65969.2
IL_6QUL_0651/A/1712:1718,
1/A/1742:1746
6x5 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5J7L_309
IL_88269.3
IL_6QUL_0661/A/1720:1724,
1/A/1736:1740
Triple sheared
Not in a motif group
homologous
IL_5J7L_310
IL_56467.8
IL_6QUL_0671/A/1727:1728,
1/A/1731:1733
Single bulged C
Not in a motif group
geometric
IL_5J7L_311
IL_61258.12
IL_6QUL_0681/A/1770:1771,
1/A/1980:1982
Single bulged A
Not in a motif group
homologous
IL_5J7L_312
IL_37497.3
IL_6QUL_0691/A/1798:1804,
1/A/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_5J7L_313
IL_17069.3
IL_6QUL_0701/A/1837:1840,
1/A/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_314
IL_88739.1
IL_6QUL_0711/A/1841:1842,
1/A/1898:1901
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_5J7L_315
IL_16396.2
IL_6QUL_0721/A/1846:1849,
1/A/1893:1894
Minor groove platform
Not in a motif group
homologous
IL_7RQB_073
IL_88739.1
IL_6QUL_0731/A/1864:1867,
1/A/1874:1878
UAA/GAN related
Not in a motif group
homologous
IL_5J7L_317
IL_77691.1
IL_6QUL_0741/A/1933:1934,
1/A/1964:1967
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_318
IL_59677.2
IL_6QUL_0751/A/1934:1945,
1/A/1961:1964
No text annotation
Not in a motif group
geometric
IL_7A0S_072
IL_81589.2
IL_6QUL_0761/A/2050:2052,
1/A/2617:2618
Major groove platform
Not in a motif group
homologous
IL_7RQB_078
IL_27635.2
IL_6QUL_0771/A/2054:2056,
1/A/2612:2615
No text annotation
Not in a motif group
homologous
IL_5J7L_321
IL_54678.5
IL_6QUL_0781/A/2067:2069,
1/A/2442:2443
Single bulged U
Not in a motif group
homologous
IL_7A0S_075
IL_83039.14
IL_6QUL_0791/A/2070:2071,
1/A/2438:2441
Minor groove platform
Not in a motif group
homologous
IL_7A0S_076
IL_42622.2
IL_6QUL_0801/A/2081:2083,
1/A/2236:2239
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5J7L_325
IL_38958.7
IL_6QUL_0811/A/2085:2087,
1/A/2232:2234
No text annotation
Not in a motif group
homologous
IL_7RQB_083
IL_95997.1
IL_6QUL_0821/A/2202:2204,
1/A/2220:2221
Single bulged U
Not in a motif group
homologous
IL_5J7L_331
IL_83039.14
IL_6QUL_0831/A/2297:2299,
1/A/2317:2321
No text annotation
Not in a motif group
geometric
IL_5J7L_332
IL_56105.1
IL_6QUL_0841/A/2350:2353,
1/A/2364:2367
Double sheared
Not in a motif group
homologous
IL_5J7L_333
IL_09705.9
IL_6QUL_0851/A/2401:2403,
1/A/2414:2415
Single bulged U
Not in a motif group
homologous
IL_4WF9_088
IL_83039.14
IL_6QUL_0861/A/2453:2454,
1/A/2498:2500
Single stack bend
Not in a motif group
geometric
IL_4WF9_089
IL_76488.2
IL_6QUL_0871/A/2454:2455,
1/A/2496:2498
Major groove platform
Not in a motif group
homologous
IL_4WF9_090
IL_27635.2
IL_6QUL_0881/A/2457:2459,
1/A/2493:2494
Major groove platform
Not in a motif group
geometric
IL_3OXE_003
IL_27635.2
IL_6QUL_0891/A/2459:2461,
1/A/2489:2493
Major groove minor groove platform with extra cWW
Not in a motif group
homologous
IL_5J7L_337
IL_92788.2
IL_6QUL_0901/A/2466:2470,
1/A/2480:2484
Triple sheared
Not in a motif group
homologous
IL_5J7L_338
IL_56467.8
IL_6QUL_0911/A/2507:2508,
1/A/2580:2582
Major groove platform
Not in a motif group
homologous
IL_7A0S_088
IL_76223.2
IL_6QUL_0921/A/2510:2512,
1/A/2574:2578
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_5J7L_340
IL_90933.2
IL_6QUL_0931/A/2512:2513,
1/A/2571:2574
No text annotation
Not in a motif group
geometric
IL_5J7L_341
IL_71530.2
IL_6QUL_0941/A/2522:2523,
1/A/2540:2543
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5J7L_342
IL_95601.3
IL_6QUL_0951/A/2591:2592,
1/A/2601:2603
Single bulged A
Not in a motif group
homologous
IL_7RQB_101
IL_37497.3
IL_6QUL_0961/A/2636:2640,
1/A/2774:2782
No text annotation
Not in a motif group
homologous
IL_5J7L_345
IL_04638.1
IL_6QUL_0971/A/2652:2658,
1/A/2663:2668
Sarcin-Ricin target in LSU H95; G-bulge
Not in a motif group
homologous
IL_5J7L_346
IL_16458.1
IL_6QUL_0981/A/2680:2684,
1/A/2725:2727
C-loop
Not in a motif group
homologous
IL_5J7L_347
IL_63596.6
IL_6QUL_0991/A/2687:2691,
1/A/2718:2722
No text annotation
Not in a motif group
homologous
IL_5J7L_348
IL_08296.3
IL_6QUL_1001/A/2695:2696,
1/A/2711:2714
Multiple bulged bases
Not in a motif group
homologous
IL_5J7L_349
IL_71530.2
IL_6QUL_1011/A/2737:2742,
1/A/2762:2767
UAA/GAN with extra cWW
Not in a motif group
homologous
IL_5J7L_350
IL_49767.5
IL_6QUL_1021/A/2795:2796,
1/A/2799:2801
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_37497.3
IL_6QUL_1031/A/2806:2811,
1/A/2889:2892
No text annotation
Not in a motif group
homologous
IL_5J7L_351
IL_49460.2
IL_6QUL_1041/A/2838:2839,
1/A/2878:2880
Major groove intercalation
Not in a motif group
homologous
IL_4WF9_106
IL_16396.2
IL_6QUL_1051/A/2843:2846,
1/A/2870:2874
Multiple bulged bases with non-canonical cWW
Not in a motif group
homologous
IL_5J7L_353
IL_58764.3
IL_6QUL_1061/A/2847:2852,
1/A/2865:2869
No text annotation
Not in a motif group
homologous
IL_5J7L_354
IL_83162.5
IL_6QUL_1071/B/17:18,
1/B/65:67
Major groove intercalation
Not in a motif group
homologous
IL_5J7L_355
IL_37497.3
IL_6QUL_1081/B/23:28,
1/B/56:60
No text annotation
Not in a motif group
homologous
IL_5J7L_356
IL_18472.2
IL_6QUL_1091/B/30:31,
1/B/51:54
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_7RQB_113
IL_09061.6
IL_6QUL_1101/B/34:38,
1/B/44:48
Symmetric double minor groove platform
Not in a motif group
homologous
IL_5J7L_358
IL_58103.6
IL_6QUL_1111/B/71:79,
1/B/97:105
Bacterial 5S Loop E
Not in a motif group
homologous
IL_5J7L_359
IL_56455.3

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6QUL_0011/A/30:31,
1/A/474:481,
1/A/509:510
No text annotation
Not in a motif group
homologous
J3_5J7L_036
NA
J3_6QUL_0021/A/56:57,
1/A/70:76,
1/A/110:114
No text annotation
Not in a motif group
homologous
J3_5J7L_037
NA
J3_6QUL_0031/A/683:689,
1/A/773:775,
1/A/791:794
No text annotation
Not in a motif group
homologous
J3_7RQB_004
NA
J3_6QUL_0041/A/698:700,
1/A/732:736,
1/A/760:763
No text annotation
Not in a motif group
homologous
J3_7RQB_005
NA
J3_6QUL_0051/A/1055:1057,
1/A/1081:1087,
1/A/1102:1104
No text annotation
Not in a motif group
homologous
J3_5J7L_040
NA
J3_6QUL_0061/A/1298:1303,
1/A/1625:1627,
1/A/1639:1642
No text annotation
Not in a motif group
homologous
J3_5J7L_041
NA
J3_6QUL_0071/A/1306:1309,
1/A/1605:1611,
1/A/1620:1622
No text annotation
Not in a motif group
homologous
J3_7A0S_007
NA
J3_6QUL_0081/A/1344:1349,
1/A/1382:1385,
1/A/1402:1403
No text annotation
Not in a motif group
homologous
J3_5J7L_043
NA
J3_6QUL_0091/A/2091:2093,
1/A/2196:2200,
1/A/2223:2228
No text annotation
Not in a motif group
homologous
J3_5J7L_044
NA
J3_6QUL_0101/A/2295:2297,
1/A/2321:2323,
1/A/2332:2337
No text annotation
Not in a motif group
homologous
J3_5J7L_045
NA
J3_6QUL_0111/A/2517:2520,
1/A/2545:2547,
1/A/2561:2567
No text annotation
Not in a motif group
homologous
J3_5J7L_046
NA
J3_6QUL_0121/A/2789:2791,
1/A/2805:2806,
1/A/2892:2894
No text annotation
Not in a motif group
J3_6QUL_0131/A/2812:2815,
1/A/2831:2836,
1/A/2882:2888
No text annotation
Not in a motif group
homologous
J3_5J7L_048
NA
J3_6QUL_0141/B/10:16,
1/B/68:70,
1/B/106:110
No text annotation
Not in a motif group
homologous
J3_5J7L_049
NA

Problematic loops

No problematic loops


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