RNA 3D Hub

JAR3D Query RF03064-CCF-3.48 completed
Run on Motif Atlas Version using the Rfam secondary structure. Run with the CaCoFold secondary structure.

Rfam family RF03064 maps to one chain: 8IAZ|1|E See more about it at RNA 3D Hub by filtering on the chain or the Rfam family.

Loop 4 Internal loop

Column numbers: 57-58, 125-127 - View nucleotides in PDB file(s) 
    Scored sequences and counts

    
    UG*AAG  329

    
    AA*AAU  282

    
    AG*AAU  156

    
    GU*GGC   98

    
    UG*AAA   89

    
    CG*AAG   60

    
    CA*AAG   51

    
    GG*AAC   43

    
    AU*GGU   42

    
    GA*AAC   32

    
    GU*GAC   29

    
    UA*AAG   26

    
    UU*GAA   20

    
    UU*GGA   20

    
    CU*GAG   13

    
    UU*AAG   13

    
    GU*AAC    9

    
    UA*AAA    9

    
    CU*AAG    7

    
    CA*ACG    6

    
    GC*AAC    6

    
    AU*GAU    5

    
    GU*AGC    5

    
    UU*AAA    5

    
    CA*AAA    4

    
    GU*ACC    4

    
    UC*AGA    4

    
    CC*AAA    3

    
    CC*GAG    3

    
    CU*ACG    3

    
    AA*ACU    2

    
    AU*AAU    2

    
    AU*AGU    2

    
    CC*AAG    2

    
    CG*AAA    2

    
    GA*AAA    2

    
    GG*AAU    2

    
    UA*ACA    2

    
    UC*GGA    2

    
    UG*AAU    2

    
    UU*ACG    2

    
    UU*AGA    2

    
    UU*GGG    2

    
    AA*AAC    1

    
    AA*AUA    1

    
    AA*GAU    1

    
    AG*AAC    1

    
    AU*ACU    1

    
    AU*AGC    1

    
    AU*GAG    1

    
    CA*AGU    1

    
    CG*AGG    1

    
    CU*GGG    1

    
    GA*GAC    1

    
    GU*AAA    1

    
    GU*AGU    1

    
    GU*GGA    1

    
    GU*GGG    1

    
    UC*GAA    1

    
    UU*ACA    1

    
    Omitted sequenced and counts

    
    --*AGA    1
Click on headings to reorder table
# Matching motif group Acceptance Rate Mean Cutoff Score Full Edit Distance Interior Edit Distance Basepair Diagram and most common annotation
1

Motif group IL_04038.3

Basepair signature:
cWW-L-cWW

100.00 55.11 2 0

Single stack bend

2

Motif group IL_80663.8

Basepair signature:
cWW-tHS-cSH-cWW

100.00 34.47 2 0

Major groove platform

3

Motif group IL_14266.1

Basepair signature:
cWW-R-cWW

99.93 64.82 3 0

4

Motif group IL_81328.5

Basepair signature:
cWW-R-cWW

99.93 58.72 3 0

Major groove intercalation

5

Motif group IL_98882.2

Basepair signature:
cWW-R-cWW

99.93 30.07 4 1

Decoding loop related

6

Motif group IL_02060.2

Basepair signature:
cWW-cHH-cWW

99.93 16.78 3 0

Major groove platform

7

Motif group IL_75560.1

Basepair signature:
cWW-cWW

99.79 57.88 4 0

Single bulged A

8

Motif group IL_71960.4

Basepair signature:
cWW-cSH-cWW

99.79 55.85 3 0

Minor groove platform

9

Motif group IL_60676.4

Basepair signature:
cWW-R-cWW

99.79 52.32 4 0

10

Motif group IL_94181.3

Basepair signature:
cWW-L-cWW

99.79 29.52 2 1

Intercalated cWS

11

Motif group IL_40508.3

Basepair signature:
cWW-cWW

99.72 58.39 3 0

Major groove intercalation

12

Motif group IL_59521.1

Basepair signature:
cWW-cWW

99.15 22.71 4 1

13

Motif group IL_94592.1

Basepair signature:
cWW-cWW

99.15 19.93 4 1

Single bulged U

14

Motif group IL_54678.2

Basepair signature:
cWW-cWW

99.08 19.85 3 1

15

Motif group IL_19557.1

Basepair signature:
cWW-L-cWW

98.66 22.64 4 1

16

Motif group IL_99645.1

Basepair signature:
cWW-cWW

97.25 27.93 5 1

Single bulged G

17

Motif group IL_13730.9

Basepair signature:
cWW-cWW

96.97 23.20 2 1

Multiple bulged bases

18

Motif group IL_85053.1

Basepair signature:
cWW-cWW

96.83 21.97 4 1

Single bulged G

19

Motif group IL_06437.8

Basepair signature:
cWW-tSH-cWW

87.03 33.04 2 0

Minor groove platform

20

Motif group IL_80007.14

Basepair signature:
cWW-cWW

86.89 39.13 1 0

Single bulged A

21

Motif group IL_96600.1

Basepair signature:
cWW-cWW

73.36 4.01 5 1

Single bulged U

22

Motif group IL_39371.2

Basepair signature:
cWW-cWW

72.37 0.01 5 2

23

Motif group IL_03932.2

Basepair signature:
cWW-tHS-cWW

44.26 -7.04 3 1

Major groove platform with intercalation

24

Motif group IL_27900.1

Basepair signature:
cWW-tSH-cWW

33.40 -14.91 3 1

Minor groove platform

25

Motif group IL_59137.8

Basepair signature:
cWW-cWW

20.37 -0.38 2 1

Single bulged G

26

Motif group IL_55658.1

Basepair signature:
cWW-L-L-cWW

19.10 -10.38 3 1

27

Motif group IL_10543.1

Basepair signature:
cWW-L-R-cWW

12.97 -47.59 4 2

Isolated non-canonical cWW contact

28

Motif group IL_61258.7

Basepair signature:
cWW-cWW

4.16 -16.10 2 1

Single bulged C

29

Motif group IL_83039.9

Basepair signature:
cWW-cWW

3.38 -27.22 2 1

Single bulged U

30

Motif group IL_67474.2

Basepair signature:
cWW-R-R-cWW

2.82 -19.93 3 1

31

Motif group IL_02284.2

Basepair signature:
cWW-L-R-cWW

2.82 -20.23 4 1

32

Motif group IL_07342.2

Basepair signature:
cWW-cWW

2.54 -24.25 3 1

Bulged stacked bases

33

Motif group IL_76195.1

Basepair signature:
cWW-L-L-cWW

1.90 -18.95 3 1

34

Motif group IL_91036.1

Basepair signature:
cWW-R-R-cWW

1.90 -22.54 3 1

35

Motif group IL_83121.6

Basepair signature:
cWW-cSS-R-cWW

1.69 -16.54 3 1

36

Motif group IL_19389.4

Basepair signature:
cWW-L-cSH-cWW

1.06 -41.58 3 1

Major groove platform with intercalated tWH

37

Motif group IL_77771.1

Basepair signature:
cWW-L-L-cWW

0.99 -48.01 4 1

38

Motif group IL_65075.1

Basepair signature:
cWW-L-L-cWW

0.78 -48.14 5 2

39

Motif group IL_51971.1

Basepair signature:
cWW-L-R-cWW

0.78 -52.05 5 2

Isolated non-canonical cWW contact

40

Motif group IL_80617.1

Basepair signature:
cWW-L-R-cWW

0.78 -52.05 5 2

Isolated non-canonical cWW contact

41

Motif group IL_77341.1

Basepair signature:
cWW-L-R-cWW

0.78 -53.54 5 2

42

Motif group IL_16160.1

Basepair signature:
cWW-L-R-cWW

0.78 -57.01 5 2

Isolated non-canonical cWW pair

43

Motif group IL_04106.2

Basepair signature:
cWW-cWW-cWW

0.00 -67.32 4 2

Isolated non-canonical cWW pair

44

Motif group IL_01312.10

Basepair signature:
cWW-cWW-cWW

0.00 -73.21 2 1

Isolated non-canonical cWW pair

45

Motif group IL_37181.1

Basepair signature:
cWW-cWW-cWW

0.00 -73.92 3 2

Isolated non-canonical cWW pair

46

Motif group IL_78030.1

Basepair signature:
cWW-L-R-R-cWW

0.00 -75.42 5 2

47

Motif group IL_42521.1

Basepair signature:
cWW-L-L-cWW-cWW

0.00 -78.92 5 3

48

Motif group IL_23663.4

Basepair signature:
cWW-cWW-cSH-cWW

0.00 -80.81 4 2

49

Motif group IL_38958.5

Basepair signature:
cWW-tHS-cWW

0.00 -81.01 4 2

Isolated tHS basepair with bulges

50

Motif group IL_67621.4

Basepair signature:
cWW-cWS-cWW

0.00 -81.13 3 1

Isolated cWS basepair

51

Motif group IL_99373.2

Basepair signature:
cWW-bif-L-cWW

0.00 -82.02 4 2

52

Motif group IL_81326.2

Basepair signature:
cWW-L-cWW-cWW

0.00 -85.03 4 2

53

Motif group IL_50789.1

Basepair signature:
cWW-L-L-L-cWW

0.00 -89.22 5 3

54

Motif group IL_23544.2

Basepair signature:
cWW-L-R-R-cWW

0.00 -91.67 5 3

55

Motif group IL_36143.2

Basepair signature:
cWW-R-cWW

0.00 -93.20 4 2

56

Motif group IL_92604.1

Basepair signature:
cWW-L-R-L-cWW

0.00 -93.99 4 2

57

Motif group IL_18459.1

Basepair signature:
cWW-cWW-R-cWW

0.00 -94.65 4 2

58

Motif group IL_68741.1

Basepair signature:
cWW-R-R-R-cWW

0.00 -96.21 4 2

59

Motif group IL_35310.1

Basepair signature:
cWW-R-R-cWW

0.00 -96.32 5 3

Bulged stacked bases

60

Motif group IL_24590.1

Basepair signature:
cWW-tHH-cWW

0.00 -100.21 5 2

61

Motif group IL_90348.1

Basepair signature:
cWW-R-R-R-cWW

0.00 -101.27 5 3

62

Motif group IL_28564.1

Basepair signature:
cWW-L-R-cWW-cWW

0.00 -103.43 5 3

63

Motif group IL_31890.1

Basepair signature:
cWW-L-R-R-L-L-cWW

0.00 -105.40 6 4

64

Motif group IL_03470.1

Basepair signature:
cWW-R-R-R-cWW

0.00 -107.67 6 3

65

Motif group IL_94431.4

Basepair signature:
cWW-cSH-cWS-cWW

0.00 -111.61 3 1

Minor groove platform

66

Motif group IL_48280.1

Basepair signature:
cWW-tSH-R-cWW

0.00 -113.52 5 3

67

Motif group IL_14148.3

Basepair signature:
cWW-cWW-tSH-cWW

0.00 -114.43 4 2

Minor groove platform with extra cWW

68

Motif group IL_98736.1

Basepair signature:
cWW-L-R-cSW-cWW

0.00 -115.08 6 4

Self complementary

69

Motif group IL_07931.4

Basepair signature:
cWW-tSH-cWW-cWW

0.00 -115.15 5 3

70

Motif group IL_87630.3

Basepair signature:
cWW-tSH-cSH-cWW

0.00 -116.24 4 2

Major groove platform with extra pair

71

Motif group IL_38810.1

Basepair signature:
cWW-L-cWW

0.00 -118.33 7 4

72

Motif group IL_46732.1

Basepair signature:
cWW-R-R-tHS-cWW

0.00 -119.36 7 4

73

Motif group IL_54997.4

Basepair signature:
cWW-tWW-cWW

0.00 -119.52 3 2

Isolated tWW turn

74

Motif group IL_95485.5

Basepair signature:
cWW-cSH-cWW-cWW

0.00 -119.61 4 2

Major groove platform with extra cWW

75

Motif group IL_34915.2

Basepair signature:
cWW-R-tWH-cSH-cWW

0.00 -119.74 5 4

Receptor of 11-nt loop-receptor motif

76

Motif group IL_60695.5

Basepair signature:
cWW-L-R-R-R-R-cWW

0.00 -119.83 6 5

77

Motif group IL_44325.1

Basepair signature:
cWW-cWH-R-cWW

0.00 -121.75 6 3

78

Motif group IL_70096.1

Basepair signature:
cWW-L-cWW-cWW

0.00 -122.01 7 5

Kink-turn related

79

Motif group IL_42589.5

Basepair signature:
cWW-cHW-cWW

0.00 -125.92 3 1

Isolated cWH basepair

80

Motif group IL_61017.1

Basepair signature:
cWW-L-R-R-R-cWW

0.00 -126.05 5 3

81

Motif group IL_46401.1

Basepair signature:
cWW-L-L-L-L-tHH-cWW

0.00 -126.91 7 5

82

Motif group IL_34626.3

Basepair signature:
cWW-L-R-L-cWW

0.00 -130.27 5 3

83

Motif group IL_92343.1

Basepair signature:
cWW-L-R-R-R-L-L-cWW

0.00 -131.36 7 5

84

Motif group IL_19724.1

Basepair signature:
cWW-cSH-R-R-cWW

0.00 -131.85 4 3

85

Motif group IL_23934.1

Basepair signature:
cWW-R-tWH-tHS-cWW

0.00 -132.57 5 4

tSH-tHW

86

Motif group IL_39507.1

Basepair signature:
cWW-L-R-L-L-L-cWW

0.00 -134.84 7 5

87

Motif group IL_61084.1

Basepair signature:
cWW-L-R-R-L-L-L-cWW

0.00 -135.35 7 5

88

Motif group IL_06300.1

Basepair signature:
cWW-tSH-L-R-L-cWW

0.00 -136.62 6 4

89

Motif group IL_01963.1

Basepair signature:
cWW-L-R-R-R-cSH-cWW

0.00 -138.47 8 5

90

Motif group IL_09732.5

Basepair signature:
cWW-cWW-L-R-L-cWW

0.00 -140.25 6 4

91

Motif group IL_20549.1

Basepair signature:
cWW-tWH-cSH-cWW

0.00 -141.74 5 4

Receptor of 11-nt loop-receptor motif

92

Motif group IL_47108.1

Basepair signature:
cWW-tHH-L-R-R-R-cWW

0.00 -142.94 6 5

93

Motif group IL_53034.1

Basepair signature:
cWW-cWW-cWW

0.00 -145.12 6 3

94

Motif group IL_79734.1

Basepair signature:
cWW-R-R-R-R-cWW

0.00 -145.43 6 4

95

Motif group IL_62827.1

Basepair signature:
cWW-R-cWH-R-R-R-cWW

0.00 -146.36 7 6

cWH basepair with bulged bases

96

Motif group IL_19569.2

Basepair signature:
cWW-L-L-L-L-cWW

0.00 -148.18 6 4

97

Motif group IL_70480.1

Basepair signature:
cWW-L-R-L-tHW-L-L-cWW

0.00 -149.18 8 6

98

Motif group IL_74736.1

Basepair signature:
cWW-tSH-L-R-R-L-cWW

0.00 -150.87 8 6

99

Motif group IL_61242.1

Basepair signature:
cWW-cWW-L-R-cWW-cWW

0.00 -152.33 8 6

100

Motif group IL_42092.1

Basepair signature:
cWW-tSH-L-L-L-cWW

0.00 -153.04 6 4

Isolated basepair with bulged bases

101

Motif group IL_80884.1

Basepair signature:
cWW-cWW-R-R-R-R-cWW

0.00 -153.28 8 6

102

Motif group IL_82988.1

Basepair signature:
cWW-cWW-L-L-tHS-cWW

0.00 -155.02 6 5

103

Motif group IL_73399.1

Basepair signature:
cWW-L-R-R-R-cWW

0.00 -155.40 6 5

104

Motif group IL_90720.1

Basepair signature:
cWW-L-L-tHS-R-cWW

0.00 -156.14 6 4

105

Motif group IL_08939.1

Basepair signature:
cWW-L-L-L-L-cWW

0.00 -157.59 7 4

106

Motif group IL_90991.4

Basepair signature:
cWW-cWW

0.00 -159.97 5 3

Multiple bulged bases

107

Motif group IL_61275.1

Basepair signature:
cWW-L-R-tHW-cWW

0.00 -162.90 8 6

108

Motif group IL_81215.2

Basepair signature:
cWW-cWW-L-R-R-cWW

0.00 -163.02 6 4

109

Motif group IL_64842.1

Basepair signature:
cWW-L-L-L-tWH-cSH-cWW

0.00 -164.01 8 6

110

Motif group IL_69421.1

Basepair signature:
cWW-cWW-tHH-cWW

0.00 -164.63 6 4

111

Motif group IL_95811.1

Basepair signature:
cWW-L-L-L-cWW-L-bif-cWW

0.00 -165.08 8 6

Vitamin B12 Aptamer

112

Motif group IL_74980.1

Basepair signature:
cWW-L-R-cWW-cWW-cWW

0.00 -167.54 8 6

113

Motif group IL_47002.1

Basepair signature:
cWW-tSH-L-L-tHH-cWW

0.00 -168.99 7 6

114

Motif group IL_97601.6

Basepair signature:
cWW-tWH-cSH-cWW

0.00 -169.68 5 4

Receptor of 11-nt loop-receptor motif

115

Motif group IL_79393.7

Basepair signature:
cWW-L-R-R-L-L-L-L-cWW

0.00 -170.33 7 6

116

Motif group IL_78994.1

Basepair signature:
cWW-cSW-cWW-cWW

0.00 -170.47 6 4

117

Motif group IL_70995.5

Basepair signature:
cWW-tSH-L-cWW

0.00 -170.52 3 1

Major groove platform; stack outside cWW

118

Motif group IL_29978.3

Basepair signature:
cWW-L-L-L-tHS-cWW

0.00 -170.94 6 4

119

Motif group IL_66745.4

Basepair signature:
cWW-cWW-L-R-cWW-cWW

0.00 -172.64 7 5

120

Motif group IL_94351.1

Basepair signature:
cWW-tSH-L-R-L-tHS-cWW

0.00 -174.23 9 6

121

Motif group IL_56105.1

Basepair signature:
cWW-tHS-cSH-tHS-cWW

0.00 -175.01 5 3

122

Motif group IL_90157.1

Basepair signature:
cWW-L-L-L-L-tHH-cWS-cWW

0.00 -176.75 8 7

123

Motif group IL_90600.1

Basepair signature:
cWW-R-R-tHS-cWW

0.00 -177.82 5 3

124

Motif group IL_88269.2

Basepair signature:
cWW-tSH-tHW-L-cSH-R-cWW

0.00 -180.59 8 6

6x5 Sarcin-Ricin; G-bulge

125

Motif group IL_74719.1

Basepair signature:
cWW-tSH-tHS-cWW

0.00 -180.82 5 4

Double sheared

126

Motif group IL_27393.6

Basepair signature:
cWW-L-L-L-L-L-L-cWW

0.00 -180.99 7 5

127

Motif group IL_84315.1

Basepair signature:
cWW-tHS-cWS-R-tSW-R-R-cWW

0.00 -182.24 7 5

128

Motif group IL_08296.2

Basepair signature:
cWW-tSH-R-R-cWW

0.00 -182.83 7 5

UAA/GAN related, with intercalation

129

Motif group IL_70627.1

Basepair signature:
cWW-R-R-tWH-L-R-cWW

0.00 -184.10 7 6

UAA/GAN related

130

Motif group IL_46112.1

Basepair signature:
cWW-L-L-L-L-L-cWW

0.00 -184.37 8 6

131

Motif group IL_96860.1

Basepair signature:
cWW-cWW-cWH-L-cWW-cWW

0.00 -186.73 7 5

132

Motif group IL_72416.1

Basepair signature:
cWW-tHW-tHS-cWW-cWW

0.00 -189.52 6 5

133

Motif group IL_83162.2

Basepair signature:
cWW-tSH-L-R-L-tHH-cWW

0.00 -189.79 7 6

tHS double platform

134

Motif group IL_69979.1

Basepair signature:
cWW-L-R-R-R-R-L-L-L-cWW

0.00 -189.82 9 7

135

Motif group IL_51087.2

Basepair signature:
cWW-L-R-R-R-L-cWW

0.00 -191.67 5 4

136

Motif group IL_58346.1

Basepair signature:
cWW-cSH-R-R-R-L-cWW-cWW

0.00 -191.79 7 6

137

Motif group IL_24905.8

Basepair signature:
cWW-cSW-R-cWW

0.00 -192.94 6 5

138

Motif group IL_89587.1

Basepair signature:
cWW-L-R-L-cWW-cWW-cWW

0.00 -194.82 8 6

139

Motif group IL_80412.1

Basepair signature:
cWW-R-R-R-R-R-tWS-cWW

0.00 -196.32 9 7

140

Motif group IL_74184.1

Basepair signature:
cWW-L-L-L-L-L-tHS-cWW

0.00 -197.22 9 7

141

Motif group IL_81522.1

Basepair signature:
cWW-cSH-L-cWS-cWW

0.00 -199.72 7 5

Major groove minor groove platform with intercalation; mini C-loop

142

Motif group IL_45034.1

Basepair signature:
cWW-L-L-L-L-L-L-cWW

0.00 -202.54 8 5

143

Motif group IL_47154.3

Basepair signature:
cWW-cSW-L-R-cWW

0.00 -203.12 6 4

144

Motif group IL_38634.3

Basepair signature:
cWW-cWH-L-R-cWW

0.00 -203.26 6 4

cWH basepair and non-canonical AC

145

Motif group IL_05523.1

Basepair signature:
cWW-L-R-cWW-cSW-cSH-cWW

0.00 -203.28 8 6

146

Motif group IL_64879.1

Basepair signature:
cWW-tSH-tSH-tHS-tHS-cWW

0.00 -205.52 7 6

Triple sheared related

147

Motif group IL_97697.1

Basepair signature:
cWW-L-R-L-L-L-L-bif-cWW

0.00 -206.00 9 8

Reverse turn

148

Motif group IL_98711.1

Basepair signature:
cWW-tSH-tHW-tWW-cWW

0.00 -207.55 9 6

tSH-tHW-tWW

149

Motif group IL_42032.1

Basepair signature:
cWW-tWH-R-R-R-cSH-cWW-cWW

0.00 -207.57 9 7

150

Motif group IL_14397.1

Basepair signature:
cWW-tWH-tHH-tHS-cWW

0.00 -207.91 7 6

151

Motif group IL_98876.1

Basepair signature:
cWW-cWW-L-R-R-tHW-bif-cWW

0.00 -208.03 10 8

152

Motif group IL_93094.1

Basepair signature:
cWW-tSH-tHH-R-R-R-cWW

0.00 -209.50 8 6

Reverse kink-turn

153

Motif group IL_96878.1

Basepair signature:
cWW-tSH-L-R-R-L-L-L-cWW

0.00 -211.16 8 7

154

Motif group IL_17971.1

Basepair signature:
cWW-tWW-L-tWW-L-cWW

0.00 -211.55 10 9

155

Motif group IL_29821.1

Basepair signature:
cWW-tWH-L-R-tHS-cWW

0.00 -212.28 7 6

UAA/GAN with extra stack

156

Motif group IL_84158.1

Basepair signature:
cWW-cWW-cWW-cWW

0.00 -213.83 6 4

Tandem non-canonical cWW pairs

157

Motif group IL_89197.1

Basepair signature:
cWW-tSH-R-tHH-tHS-cWW

0.00 -215.08 9 7

158

Motif group IL_57188.2

Basepair signature:
cWW-tWW-cSH-L-tWW-cSH-cWW

0.00 -215.39 8 7

Kink-turn related

159

Motif group IL_95688.1

Basepair signature:
cWW-L-cSS-cSS-L-R-cWW

0.00 -215.68 8 6

160

Motif group IL_35058.1

Basepair signature:
cWW-tSW-L-cWS-tSW-R-R-cWW

0.00 -215.74 8 6

Symmetric double minor groove platform

161

Motif group IL_77870.1

Basepair signature:
cWW-bif-L-L-L-tHS-cWW-cWW

0.00 -216.77 9 8

162

Motif group IL_66497.1

Basepair signature:
cWW-tWH-L-R-tHS-bif-cWW

0.00 -216.80 10 8

163

Motif group IL_17470.4

Basepair signature:
cWW-R-tHW-tHW-tWW-cWW

0.00 -216.99 9 8

tHW-tHW cross-strand stack

164

Motif group IL_09061.3

Basepair signature:
cWW-cSW-cWW

0.00 -217.21 2 1

Major groove minor groove platform; mini C-loop

165

Motif group IL_50676.4

Basepair signature:
cWW-cWW-cWW-cWW

0.00 -218.12 6 4

Tandem non-canonical cWW pairs

166

Motif group IL_34907.1

Basepair signature:
cWW-R-tWH-L-tHS-cWW

0.00 -218.30 6 5

UAA/GAN

167

Motif group IL_89193.1

Basepair signature:
cWW-L-R-R-cSH-tWH-tHS-cWW

0.00 -218.83 8 7

5x5 Sarcin-Ricin with intercalated A; G-bulge

168

Motif group IL_54896.1

Basepair signature:
cWW-L-L-L-L-L-L-tSS-cWW

0.00 -219.41 9 8

169

Motif group IL_38969.1

Basepair signature:
cWW-L-R-L-L-L-L-L-cWW

0.00 -219.57 10 8

Reverse kink-turn related

170

Motif group IL_53523.4

Basepair signature:
cWW-tWH-L-tHS-cWW

0.00 -223.57 5 4

UAA/GAN

171

Motif group IL_70801.1

Basepair signature:
cWW-L-R-R-tWW-cWW-cWW-cWW

0.00 -223.70 9 8

172

Motif group IL_08757.2

Basepair signature:
cWW-tSH-tHW-cWW

0.00 -224.24 4 3

tSH-tHW

173

Motif group IL_22436.1

Basepair signature:
cWW-L-cSS-tWH-tHW-cWW-cWW

0.00 -225.71 9 8

Kink-turn related

174

Motif group IL_39443.1

Basepair signature:
cWW-L-L-tWH-L-R-R-L-cWW

0.00 -225.97 9 7

175

Motif group IL_86040.1

Basepair signature:
cWW-L-R-cSW-cSH-cWW

0.00 -228.40 5 3

176

Motif group IL_11882.1

Basepair signature:
cWW-L-R-R-tHW-tHW-L-R-cWW

0.00 -228.98 9 8

177

Motif group IL_55662.1

Basepair signature:
cWW-L-L-L-L-L-L-L-L-L-cWW

0.00 -230.47 10 8

178

Motif group IL_74051.1

Basepair signature:
cWW-tSS-L-tSH-tHS-L-cWW

0.00 -231.76 8 7

Kink-turn

179

Motif group IL_87677.1

Basepair signature:
cWW-tWH-tWH-tHW-tHW-cWW

0.00 -232.77 10 8

tWH-tWH-tHW-tHW

180

Motif group IL_15795.1

Basepair signature:
cWW-cSH-R-cWW

0.00 -233.08 5 3

Minor groove platform

181

Motif group IL_01502.1

Basepair signature:
cWW-L-R-R-L-L-L-L-cWW-cWW

0.00 -235.63 9 9

182

Motif group IL_81389.2

Basepair signature:
cWW-tSH-tHS-tHS-cWW

0.00 -235.82 5 4

UAA/GAN related

183

Motif group IL_65876.1

Basepair signature:
cWW-tSH-L-R-R-R-cWW

0.00 -236.37 9 8

Kink-turn

184

Motif group IL_95993.1

Basepair signature:
cWW-R-tSS-tWW-tWW-cWW

0.00 -237.71 10 9

Kink-turn related

185

Motif group IL_93585.1

Basepair signature:
cWW-L-L-L-tWH-cSH-L-cWW-cWW

0.00 -238.59 8 6

Kink-turn related

186

Motif group IL_01560.1

Basepair signature:
cWW-L-L-L-cSH-L-L-cWW

0.00 -239.50 9 6

187

Motif group IL_51877.1

Basepair signature:
cWW-L-L-tWW-L-L-L-cWS-cWW

0.00 -242.05 10 8

188

Motif group IL_15978.1

Basepair signature:
cWW-R-cSW-R-R-tHS-cWW

0.00 -242.88 9 8

189

Motif group IL_56501.1

Basepair signature:
cWW-cWW-tHH-cSH-tWH-tHS-cWW

0.00 -243.06 10 8

7x6 Sarcin-Ricin with UU cWW pair; G-bulge

190

Motif group IL_55953.2

Basepair signature:
cWW-tSH-R-tHS-L-bif-cWW

0.00 -243.42 9 7

191

Motif group IL_85877.9

Basepair signature:
cWW-cWW-cWW-cWW

0.00 -243.55 4 3

Tandem non-canonical cWW pairs

192

Motif group IL_90106.3

Basepair signature:
cWW-tHH-tHS-cWW

0.00 -244.06 5 4

193

Motif group IL_04736.1

Basepair signature:
cWW-tSW-L-R-R-L-tWS-cWW

0.00 -244.67 10 9

194

Motif group IL_59423.1

Basepair signature:
cWW-L-R-R-tHS-cWW

0.00 -245.02 6 5

195

Motif group IL_32181.1

Basepair signature:
cWW-cWW-cWW-L-cSW-L-R-R-R-cWW

0.00 -246.07 13 11

196

Motif group IL_53318.1

Basepair signature:
cWW-cWW-tWH-tSH-tHS-cWW

0.00 -246.34 8 6

197

Motif group IL_58103.4

Basepair signature:
cWW-L-L-cWS-tSW-cWW

0.00 -246.46 6 5

Symmetric double minor groove platform

198

Motif group IL_03420.1

Basepair signature:
cWW-R-cSH-tWH-tSH-tHS-cWW

0.00 -246.59 9 9

tSH-tHS-tHW

199

Motif group IL_52451.9

Basepair signature:
cWW-cWW-cWH-cWW

0.00 -247.29 5 4

200

Motif group IL_97253.1

Basepair signature:
cWW-L-R-R-R-R-R-R-R-L-L-cWW

0.00 -248.78 11 9

201

Motif group IL_74271.1

Basepair signature:
cWW-L-L-L-tWH-L-L-L-cWW

0.00 -251.56 9 7

202

Motif group IL_96942.1

Basepair signature:
cWW-L-R-R-R-tHW-tHW-bif-cWW

0.00 -251.62 11 10

203

Motif group IL_09705.6

Basepair signature:
cWW-tSH-tHS-cWW

0.00 -252.34 4 3

Double sheared

204

Motif group IL_69457.1

Basepair signature:
cWW-L-L-L-L-L-tHH-tHS-cWW

0.00 -255.71 9 8

205

Motif group IL_36582.1

Basepair signature:
cWW-L-R-L-tHH-L-tWH-tHS-cWW

0.00 -257.03 10 9

8x6 Sarcin-Ricin with inserted A; G-bulge

206

Motif group IL_62654.1

Basepair signature:
cWW-tSH-tHH-tHS-cWW

0.00 -257.33 7 6

tSH-tHH-tHS

207

Motif group IL_55666.1

Basepair signature:
cWW-R-cWH-L-L-L-cWW

0.00 -258.27 7 5

208

Motif group IL_76308.3

Basepair signature:
cWW-tSH-tWH-tHW-tHS-cWW-cWW

0.00 -258.27 8 7

tSH-tWH-tHS-cWW

209

Motif group IL_14526.1

Basepair signature:
cWW-cWW-tWW-cWW

0.00 -260.81 6 4

tWW and non-canonical cWW

210

Motif group IL_16109.3

Basepair signature:
cWW-R-cSH-tWH-tHS-cWW

0.00 -260.88 6 5

5x5 Sarcin-Ricin with intercalated A; G-bulge

211

Motif group IL_85630.1

Basepair signature:
cWW-cWW-L-R-R-R-R-R-L-tHS-cWW

0.00 -264.82 11 10

212

Motif group IL_35110.4

Basepair signature:
cWW-tSH-tHH-cSH-tWH-tHS-cWW

0.00 -265.05 8 8

7x6 Sarcin-Ricin; G-bulge

213

Motif group IL_24606.1

Basepair signature:
cWW-tSH-tHH-cSH-tWH-tHS-L-cWW

0.00 -265.12 10 9

8x6 Sarcin-Ricin with inserted Y; G-bulge

214

Motif group IL_98353.1

Basepair signature:
cWW-cWS-L-L-cWW

0.00 -267.07 8 7

215

Motif group IL_68057.1

Basepair signature:
cWW-tSS-L-tSH-tHS-cWW-cWW

0.00 -267.14 9 8

Kink-turn

216

Motif group IL_93830.2

Basepair signature:
cWW-cWW-bif-R-cSH-tWH-tHS-cWW

0.00 -267.68 9 9

7x7 Sarcin-Ricin with intercalated A; G-bulge

217

Motif group IL_02349.4

Basepair signature:
cWW-tSH-tWH-cSH-tWH-tHS-cWW

0.00 -268.19 10 9

8x6 Sarcin-Ricin with bulged A; G-bulge

218

Motif group IL_66414.4

Basepair signature:
cWW-cWW-tSH-tHS-tHS-L-R-cWW

0.00 -268.39 9 9

Triple sheared with non-canonical cWW

219

Motif group IL_65320.1

Basepair signature:
cWW-L-R-R-R-L-tHW-L-R-R-L-cWW

0.00 -268.96 11 10

220

Motif group IL_58960.1

Basepair signature:
cWW-L-L-tWW-L-L-L-cWW

0.00 -270.73 8 6

221

Motif group IL_96042.3

Basepair signature:
cWW-cWW-cSH-R-cWW

0.00 -270.94 5 3

Major groove minor groove platform with extra cWW

222

Motif group IL_33557.1

Basepair signature:
cWW-cWW-tHH-L-R-R-R-L-L-L-cWW

0.00 -274.36 11 10

Kink-turn related

223

Motif group IL_52729.1

Basepair signature:
cWW-cWW-cWW-cWW-cWH-cWW

0.00 -275.82 8 7

224

Motif group IL_54670.1

Basepair signature:
cWW-tSH-L-R-tHH-tHS-cWW

0.00 -276.79 9 8

tSH-tSH-tHH-tHS

225

Motif group IL_09129.1

Basepair signature:
cWW-tWH-tWH-L-R-L-tWW-cWW

0.00 -278.87 10 9

226

Motif group IL_49767.3

Basepair signature:
cWW-cWW-tWH-L-tHS-cWW

0.00 -279.35 8 7

UAA/GAN with extra cWW

227

Motif group IL_45944.2

Basepair signature:
cWW-L-L-tWH-L-L-L-cWW

0.00 -280.16 9 7

228

Motif group IL_90538.2

Basepair signature:
cWW-tSS-L-tSH-tSS-tHS-L-R-L-cWW

0.00 -283.16 10 9

Kink-turn

229

Motif group IL_96596.1

Basepair signature:
cWW-tSH-tHW-L-R-cWW-cWW

0.00 -284.19 10 9

230

Motif group IL_19023.1

Basepair signature:
cWW-cHW-L-L-L-L-L-L-L-L-cWW

0.00 -285.24 10 9

231

Motif group IL_63750.1

Basepair signature:
cWW-tSS-cSS-tWW-L-tSH-R-R-cWW

0.00 -287.78 11 9

232

Motif group IL_74353.1

Basepair signature:
cWW-tSH-tHS-tHS-cWW-cWW

0.00 -288.01 9 7

Triple sheared with non-canonical cWW

233

Motif group IL_29509.1

Basepair signature:
cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW

0.00 -288.06 11 10

8x7 Sarcin-Ricin; G-bulge

234

Motif group IL_18369.2

Basepair signature:
cWW-cSH-tHS-cWW

0.00 -289.32 5 3

235

Motif group IL_60171.1

Basepair signature:
cWW-L-tWH-R-R-R-cWW

0.00 -289.79 7 5

Major groove platform; stack outside cWW

236

Motif group IL_53738.1

Basepair signature:
cWW-R-R-R-R-R-R-R-R-R-R-cWW

0.00 -289.98 12 10

Pseudoknot

237

Motif group IL_51590.1

Basepair signature:
cWW-cSH-tWH-cSH-cWW-cWW

0.00 -292.25 6 4

C-loop with extra cWW pair

238

Motif group IL_53529.1

Basepair signature:
cWW-L-cWH-R-R-cWW

0.00 -292.99 5 3

239

Motif group IL_94518.4

Basepair signature:
cWW-bif-cWW-cWW-cWW-cWW

0.00 -295.22 7 7

240

Motif group IL_45481.1

Basepair signature:
cWW-L-R-cHW-L-L-tSW-L-cWW

0.00 -297.18 13 12

241

Motif group IL_86428.1

Basepair signature:
cWW-tHW-cWW-L-cSH-R-tHS-cWW-cWW

0.00 -297.89 9 7

242

Motif group IL_16456.1

Basepair signature:
cWW-tSH-tSH-tHS-tSS-tSS-R-cWW

0.00 -298.55 9 8

Kink-turn

243

Motif group IL_82426.3

Basepair signature:
cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW

0.00 -299.94 13 12

Part of G-quadruplex

244

Motif group IL_04667.1

Basepair signature:
cWW-tWH-cSW-L-R-R-L-tHS-cWW

0.00 -300.74 12 11

Kink-turn related

245

Motif group IL_36973.4

Basepair signature:
cWW-tSH-L-R-R-R-L-L-cWW-cWW

0.00 -303.45 10 9

246

Motif group IL_15861.5

Basepair signature:
cWW-L-L-L-cSH-L-cWW

0.00 -305.96 6 5

SSU/LSU pseudoknot

247

Motif group IL_19954.1

Basepair signature:
cWW-tSH-tSH-tHS-cWW-cWW

0.00 -306.04 8 7

248

Motif group IL_68633.1

Basepair signature:
cWW-tSH-tHH-cSH-tWH-tHS-L-cWW-cWW

0.00 -308.28 12 11

9x7 Sarcin-Ricin with inserted C; G-bulge

249

Motif group IL_92440.4

Basepair signature:
cWW-cWW-tWH-tWH-tHW-tHW-cWW

0.00 -309.74 11 10

tWH-tWH-tHW-tHW

250

Motif group IL_12750.1

Basepair signature:
cWW-L-R-cWW-L-R-R-R-R-L-L-cWW

0.00 -309.81 12 11

251

Motif group IL_04346.4

Basepair signature:
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

0.00 -314.43 10 10

8x7 Sarcin-Ricin; G-bulge

252

Motif group IL_90922.1

Basepair signature:
cWW-tSH-tWH-tHS-tSS-tSS-R-cWW

0.00 -314.47 9 8

Kink-turn

253

Motif group IL_76900.1

Basepair signature:
cWW-tSH-tSH-tHS-tSS-L-R-cWW

0.00 -315.91 10 9

Kink-turn

254

Motif group IL_18894.1

Basepair signature:
cWW-tSH-tSH-tHS-tHS-cWW

0.00 -317.85 8 7

Quadruple sheared

255

Motif group IL_64900.1

Basepair signature:
cWW-cWW-tSS-L-tSH-tHS-tHS-cWW

0.00 -319.89 11 10

Kink-turn

256

Motif group IL_10517.1

Basepair signature:
cWW-cWW-tSH-tWH-tHW-tHS-cWW-cWW

0.00 -320.06 11 9

257

Motif group IL_59724.1

Basepair signature:
cWW-bif-tSH-tHW-cSH-tHH-bif-cWW

0.00 -321.06 11 10

8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge

258

Motif group IL_85931.1

Basepair signature:
cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW

0.00 -321.46 10 9

Kink-turn

259

Motif group IL_89731.1

Basepair signature:
cWW-R-tWH-R-R-R-cWW

0.00 -322.61 7 5

260

Motif group IL_51265.1

Basepair signature:
cWW-tSS-L-tSH-tHS-cWW

0.00 -327.72 6 6

Kink-turn from U4

261

Motif group IL_87284.1

Basepair signature:
cWW-tSH-tHW-tWH-tHS-cWW

0.00 -331.39 8 7

tSH-tHW-tWH-tHS

262

Motif group IL_89055.1

Basepair signature:
cWW-cWW-L-R-R-L-L-L-L-L-cWW-cWW

0.00 -335.07 14 13

263

Motif group IL_66584.4

Basepair signature:
cWW-tSH-tSH-tHH-tHS-cWW

0.00 -337.89 9 7

tSH-tSH-tHH-tHS

264

Motif group IL_56867.1

Basepair signature:
cWW-L-R-R-L-L-cSS-L-cWW-cWW

0.00 -337.94 14 12

265

Motif group IL_69573.1

Basepair signature:
cWW-L-R-tWH-L-R-R-R-R-L-L-tWW-cWW

0.00 -343.56 13 12

266

Motif group IL_55896.1

Basepair signature:
cWW-tSH-tHS-tWS-cWW

0.00 -343.72 6 5

Triple sheared

267

Motif group IL_41593.1

Basepair signature:
cWW-cHW-tHW-tHW-tHW-bif-cWW

0.00 -343.86 12 11

268

Motif group IL_18472.1

Basepair signature:
cWW-R-tSW-R-tSW-L-L-cWW

0.00 -344.08 8 6

269

Motif group IL_29549.7

Basepair signature:
cWW-tSH-tSH-tHS-tSS-R-cWW

0.00 -345.44 8 8

Kink-turn

270

Motif group IL_37722.1

Basepair signature:
cWW-cWW-tSH-tWH-tHS-tSS-R-cWW

0.00 -347.46 11 10

271

Motif group IL_68780.2

Basepair signature:
cWW-tSH-tSH-tHS-tSS-R-cWW

0.00 -347.60 9 8

Kink-turn

272

Motif group IL_58819.1

Basepair signature:
cWW-L-R-R-tWH-L-tSS-tHW-R-tHH-cWW-cWW

0.00 -347.93 13 12

273

Motif group IL_21121.1

Basepair signature:
cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW

0.00 -349.40 9 7

274

Motif group IL_69091.1

Basepair signature:
cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW

0.00 -350.82 13 12

275

Motif group IL_22863.1

Basepair signature:
cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW

0.00 -351.44 12 12

tSH-tHW-tHH-tHS

276

Motif group IL_00559.1

Basepair signature:
cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-cWW-cWW

0.00 -354.49 16 15

277

Motif group IL_19048.1

Basepair signature:
cWW-bif-bif-L-L-cSW-cWW-cSH-R-cWW

0.00 -354.62 11 10

278

Motif group IL_17069.2

Basepair signature:
cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW

0.00 -358.17 11 11

Kink-turn related

279

Motif group IL_61812.1

Basepair signature:
cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW

0.00 -363.54 13 12

9x8 Sarcin-Ricin; G-bulge

280

Motif group IL_39287.1

Basepair signature:
cWW-tSH-tHS-tSS-L-R-R-R-R-R-cWW

0.00 -366.24 12 12

Kink-turn related

281

Motif group IL_34470.1

Basepair signature:
cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW

0.00 -368.50 12 12

9x8 Sarcin-Ricin with GA cWW pair; G-bulge

282

Motif group IL_20463.1

Basepair signature:
cWW-L-R-R-R-cWH-R-tHH-cSH-tWH-tHS-cWW

0.00 -374.43 13 13

7x11 Sarcin-Ricin with pseudoknotted region; G-bulge

283

Motif group IL_16702.1

Basepair signature:
cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW

0.00 -378.10 11 10

284

Motif group IL_22821.1

Basepair signature:
cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW

0.00 -380.14 15 14

Pseudoknot

285

Motif group IL_58390.1

Basepair signature:
cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW

0.00 -380.36 10 9

Minor groove platform related

286

Motif group IL_94501.1

Basepair signature:
cWW-cWW-cWW-tHW-cWH-cSH-cWH-cSH-tHS-cWW

0.00 -382.08 12 12

287

Motif group IL_45257.1

Basepair signature:
cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW

0.00 -384.65 12 10

288

Motif group IL_34780.1

Basepair signature:
cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW

0.00 -402.40 14 13

Kink-turn

289

Motif group IL_41414.1

Basepair signature:
cWW-cWW-R-R-cSH-R-bif-tWH-R-R-R-R-cWS-cWW

0.00 -404.26 17 16

290

Motif group IL_61300.1

Basepair signature:
cWW-cSS-L-tHW-tSS-L-L-L-L-L-L-cWW

0.00 -407.20 13 12

291

Motif group IL_34590.1

Basepair signature:
cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW

0.00 -409.16 14 13

9x9 Sarcin-Ricin with pseudoknotted region; G-bulge

292

Motif group IL_93270.1

Basepair signature:
cWW-L-L-cWS-cWW

0.00 -411.13 5 2

Minor groove platform

293

Motif group IL_26785.1

Basepair signature:
cWW-cWW-L-R-R-tSH-tHW-cSH-tHH-tHS-cWW

0.00 -415.91 14 13

10x8 Sarcin-Ricin; G-bulge

294

Motif group IL_72938.1

Basepair signature:
cWW-cWW-cSH-cSH-tHS-cWW

0.00 -430.99 5 3

8-nt loop receptor

295

Motif group IL_39521.4

Basepair signature:
cWW-tSH-tHW-tHS-cWW

0.00 -431.32 5 5

tSH-tWH-tHS

296

Motif group IL_31504.1

Basepair signature:
cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW

0.00 -433.61 17 15

297

Motif group IL_56455.2

Basepair signature:
cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW

0.00 -434.38 13 13

Bacterial 5S Loop E

298

Motif group IL_56467.5

Basepair signature:
cWW-tSH-tHS-tHS-cWW

0.00 -437.55 5 5

Triple sheared

299

Motif group IL_38044.1

Basepair signature:
cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW

0.00 -448.53 19 18

300

Motif group IL_24106.1

Basepair signature:
cWW-tSH-tWH-tWH-R-R-R-R-R-R-R-cWW

0.00 -449.69 14 13

301

Motif group IL_13394.1

Basepair signature:
cWW-L-R-R-R-R-tSS-R-R-R-R-R-R-R-R-L-L-L-cWW

0.00 -450.13 18 18

302

Motif group IL_08376.2

Basepair signature:
cWW-tWH-tSW-L-cWW

0.00 -452.10 5 4

C-loop

303

Motif group IL_47743.1

Basepair signature:
cWW-cSW-tWH-cSH-L-cWS-cWW

0.00 -452.58 7 5

304

Motif group IL_51366.1

Basepair signature:
cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW

0.00 -453.57 18 18

305

Motif group IL_45289.1

Basepair signature:
cWW-bif-cSH-cSW-cWW-cWW

0.00 -460.69 6 4

306

Motif group IL_17765.1

Basepair signature:
cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW

0.00 -466.82 12 11

307

Motif group IL_22615.1

Basepair signature:
cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW

0.00 -487.16 19 19

308

Motif group IL_68506.1

Basepair signature:
cWW-cWW-tSH-R-tHW-tHW-tWH-L-R-cWW-cWW

0.00 -488.91 16 15

309

Motif group IL_53581.1

Basepair signature:
cWW-tWW-L-tWH-tWH-tWH-tSS-L-L-L-bif-cWW-tSS-cSS-R-R-cWW

0.00 -500.58 19 18

Kink-turn related

310

Motif group IL_49655.1

Basepair signature:
cWW-tWW-L-R-L-L-L-L-L-L-L-L-L-L-L-cWW

0.00 -504.25 22 21

311

Motif group IL_20245.1

Basepair signature:
cWW-L-R-R-R-R-L-L-L-L-L-L-L-L-L-L-L-L-cWW-L-R-cWW

0.00 -520.18 21 20

312

Motif group IL_35904.1

Basepair signature:
cWW-tSH-tSS-tSS-R-R-R-R-cWW

0.00 -521.80 9 7

Kink-turn

313

Motif group IL_65055.1

Basepair signature:
cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW

0.00 -526.75 22 21

314

Motif group IL_80355.1

Basepair signature:
cWW-tWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW

0.00 -533.55 22 21

315

Motif group IL_67834.1

Basepair signature:
cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW

0.00 -534.30 21 19

316

Motif group IL_94878.1

Basepair signature:
cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW

0.00 -591.21 24 23

317

Motif group IL_60992.4

Basepair signature:
cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW

0.00 -597.25 14 13

318

Motif group IL_75283.1

Basepair signature:
cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW

0.00 -600.73 14 13

319

Motif group IL_84409.1

Basepair signature:
cWW-tSS-tHH-tWW-cSS-tWH-tSW-cWS-cHW-cSS-cSH-cWH-cHW-cSH-tWH-R-cWW

0.00 -656.38 20 20

320

Motif group IL_75461.2

Basepair signature:
cWW-cSS-L-R-R-cWW

0.00 -6079.51 6 5

180 degree turn

321

Motif group IL_63596.2

Basepair signature:
cWW-tWH-cSH-L-cWS-cWW

0.00 -9331.50 5 3

C-loop

322

Motif group IL_28060.3

Basepair signature:
cWW-tHH-L-cWS-R-cWW

0.00 -9999.00 6 4

Major groove minor groove platform with tHH

Coloring options: