JAR3D
Query RF03064-CCF-3.48 completed
Run on Motif Atlas Version
using the Rfam secondary structure. Run with the CaCoFold secondary structure.
Rfam family RF03064 maps to one chain: 8IAZ|1|E See more about it at RNA 3D Hub by filtering on the chain or the Rfam family.
Loop 6 Internal loop
Column numbers: 66-69, 115-119 - View nucleotides in PDB file(s)
Scored sequences and counts
G-UA*U---C 43
A-UC*G---U 28
A-UA*U---U 25
U--A*U---A 23
A-UU*A---U 19
U-UA*U---A 15
A-UU*AA--U 13
U-UA*UU--U 12
U-UU*AA--A 12
G-UA*AU--C 11
U--A*U---U 11
A-UU*G---U 9
U-UG*C---A 9
G--A*U---G 9
C-UU*AA--G 8
G-UC*G---C 8
A-UA*AU--U 7
A-CA*U---U 7
A-UC*UU--U 6
C-UA*U---G 6
C-UC*G---G 6
G--A*GU--G 6
C-UG*C---G 5
U--U*A---A 5
GAUA*UA--C 4
A-GU*GC--U 4
A-UU*AG--U 4
C-UU*GA--G 4
G-UG*AC--C 4
U-UU*AG--A 4
A-UA*A---U 4
C-UA*A---G 4
U-UG*U---G 4
U-UU*UAAAA 3
G--A*UAGAC 3
GUUG*AA--C 3
A-UA*UA--U 3
A-UA*UU--U 3
U-UG*AC--A 3
U-UU*UU--A 3
A-UG*C---U 3
A-UU*U---U 3
G-UG*U---C 3
G-UU*U---C 3
U-GU*A---A 3
U-UA*U---G 3
U-UG*G---G 3
C--A*U---U 3
GAUU*AU--C 2
A-UA*GU--U 2
U-GU*AU--A 2
U-UG*CU--G 2
U-UG*GU--G 2
U-UG*UU--U 2
U-UU*AG--G 2
U-UU*AU--U 2
A-GU*A---U 2
A-UC*G---G 2
C--A*AU--G 2
C-GG*C---G 2
G-AU*A---C 2
G-UA*U---U 2
G-UC*G---U 2
U-UA*A---A 2
U-UG*U---A 2
U-UU*A---G 2
A--A*A---U 2
A--A*U---A 2
C--A*A---G 2
C--A*C---G 2
U-U-*U---U 2
AGUA*UCGCU 1
GUUG*GGAAC 1
UAGA*UAUCA 1
UCGA*UAAGG 1
A-UC*UUGAU 1
A-UU*UCAAU 1
C-UG*UAACG 1
C-UU*UCUAG 1
C-UU*UGAAG 1
U-GA*AAAAU 1
U-GU*UCAUA 1
U-GU*UCAUG 1
UUUA*U-UUA 1
ACGC*AC--U 1
C-AA*-CACG 1
CAGU*GC--G 1
CAUG*UA--A 1
CUCA*UG--G 1
GAGA*UU--A 1
GGUU*--GAC 1
GUUG*AA--U 1
UGUA*AU--A 1
UGUU*AC--A 1
A-AU*AU--U 1
A-CG*AC--U 1
A-GA*UC--U 1
A-UC*GA--U 1
A-UU*--AAU 1
A-UU*AU--U 1
ACUA*GA--- 1
C-AA*AU--G 1
C-UA*UU--G 1
C-UG*AC--G 1
C-UU*AA--U 1
C-UU*AG--G 1
G-UG*UU--C 1
G-UU*GA--U 1
U-CU*UU--A 1
U-GA*UU--A 1
U-UA*AC--A 1
U-UA*GC--A 1
U-UA*GU--A 1
U-UA*UA--U 1
U-UA*UC--U 1
U-UG*AA--A 1
U-UG*CU--A 1
U-UU*AA--G 1
U-UU*AA--U 1
UAGA*U---A 1
A--A*AU--U 1
A--A*UU--U 1
A--C*AU--A 1
A-AA*U---U 1
A-GC*U---U 1
A-UC*GG--- 1
A-UG*U---U 1
A-UU*A---C 1
C--U*AG--G 1
C-AA*-U--G 1
C-UA*U---A 1
C-UA*U---U 1
C-UA*UU--- 1
G--U*AC--C 1
G-AA*U---C 1
G-CA*U---C 1
G-CC*G---U 1
G-GU*A---C 1
G-UA*---UC 1
G-UA*C---C 1
G-UA*C---G 1
G-UA*U---A 1
G-UC*G---G 1
G-UG*C---U 1
G-UG*U---G 1
G-UU*A---C 1
G-UU*A---U 1
U--A*AA--A 1
U--A*GU--A 1
U--U*AG--G 1
U-AC*U---A 1
U-AG*G---G 1
U-AG*U---G 1
U-CG*-G--A 1
U-CG*-U--A 1
U-CG*U---A 1
U-GA*U---A 1
U-U-*CG--G 1
U-UA*-U--A 1
U-UA*G---A 1
U-UA*U---U 1
U-UC*G---G 1
U-UG*C---G 1
--UA*UU--- 1
A--A*U---U 1
A--U*G---U 1
C--C*A---G 1
C--G*A---G 1
C-U-*A---G 1
G--A*A---U 1
G--U*A---U 1
U--A*-U--A 1
U--A*A---A 1
U--A*U---G 1
U--G*U---A 1
Omitted sequenced and counts
U--A*----A 115
U---*----G 91
U-UA*----G 55
A---*----U 37
----*----- 34
U--A*----G 33
U-UC*----G 32
--AA*----- 30
U-U-*----A 28
G--A*----G 22
C--A*----G 19
U-U-*----G 19
C-UU*----G 18
U---*----A 18
G--A*----C 17
U-UU*----G 13
C-U-*----G 13
U--G*----A 13
C---*----G 13
U-AA*----G 10
A--A*----U 9
G---*----G 8
AAUU*----U 7
U-UU*----A 7
U--U*----A 7
U---*----U 7
A-UA*----U 6
A--C*----U 6
G--U*----C 6
C-AA*----G 5
C-CA*----G 5
U-UA*----A 5
A-G-*----U 5
G--A*----U 5
G--A*-G--- 5
G---*----C 5
A-UU*----U 4
C-UA*----G 4
C-UG*----G 4
G---*AC--C 4
G-UA*----U 4
U-UA*----U 4
A-U-*----U 4
G-U-*----C 4
U-U-*----U 4
UUUA*----A 3
A-UC*----U 3
C---*AG--G 3
C-UC*----G 3
U---*AG--G 3
--AA*A---- 3
C--A*----C 3
CGCA*----G 2
UAUA*----G 2
UCUA*----A 2
UUUU*----A 2
A-UG*----U 2
C---*AA--G 2
C-GA*----G 2
C-UU*----A 2
CAU-*----G 2
G-UC*----G 2
U---*AG--A 2
U---*AU--A 2
U---*GG--A 2
--UA*G---- 2
A--U*----U 2
A-U-*----G 2
G--A*----A 2
U-A-*----G 2
A---*----C 2
G---*----U 2
AAUG*----U 1
AGUA*----U 1
CGGC*----G 1
CUUA*----G 1
GAUA*----C 1
GGUU*----C 1
U---*GUU-A 1
UACA*----A 1
UAUU*----A 1
UUUA*----G 1
UUUA*----U 1
A---*--AAU 1
A---*AU--U 1
A---*GC--U 1
A-AA*----U 1
A-GA*----U 1
A-UU*----A 1
A-UU*----G 1
C---*UU--G 1
C-AU*----G 1
C-GC*----G 1
C-GG*----G 1
C-UA*A---- 1
CGG-*----G 1
G---*GC--C 1
G-UA*----G 1
GGU-*----C 1
U-CA*----G 1
U-GA*----A 1
U-GG*----A 1
U-UC*----U 1
U-UG*----A 1
U-UU*----C 1
---A*AA--- 1
---A*UA--- 1
--GA*A---- 1
A---*A---U 1
A---*U---U 1
A--A*----A 1
A--A*----C 1
A--A*----G 1
A--G*----U 1
A-UA*----- 1
C---*A---A 1
C---*A---G 1
C--C*----U 1
C--U*----G 1
C-A-*----G 1
C-C-*----G 1
C-U-*----A 1
G---*G---G 1
G--U*----U 1
G-U-*----G 1
U---*A---A 1
U---*U---U 1
U--A*----U 1
U--C*----A 1
U--U*----G 1
U-U-*----C 1
---A*A---- 1
U-U-*----- 1
Click on headings to reorder table
| # | Matching motif group | Acceptance Rate | Mean Cutoff Score | Full Edit Distance | Interior Edit Distance | Basepair Diagram and most common annotation |
|---|---|---|---|---|---|---|
| 1 |
Motif group IL_94592.1
Basepair signature:
|
90.45 | 37.04 | 3 | 1 |
Single bulged U |
| 2 |
Motif group IL_83039.9
Basepair signature:
|
81.65 | 23.73 | 1 | 1 |
Single bulged U |
| 3 |
Motif group IL_54678.2
Basepair signature:
|
80.90 | 38.01 | 4 | 1 |
|
| 4 |
Motif group IL_39371.2
Basepair signature:
|
74.53 | 24.61 | 3 | 1 |
|
| 5 |
Motif group IL_04038.3
Basepair signature:
|
74.53 | 17.95 | 2 | 0 |
Single stack bend |
| 6 |
Motif group IL_59521.1
Basepair signature:
|
73.78 | 39.79 | 3 | 1 |
|
| 7 |
Motif group IL_98882.2
Basepair signature:
|
69.29 | 34.70 | 3 | 1 |
Decoding loop related |
| 8 |
Motif group IL_13730.9
Basepair signature:
|
62.36 | 0.76 | 3 | 1 |
Multiple bulged bases |
| 9 |
Motif group IL_75560.1
Basepair signature:
|
59.74 | -7.05 | 4 | 1 |
Single bulged A |
| 10 |
Motif group IL_59137.8
Basepair signature:
|
59.74 | -16.13 | 2 | 1 |
Single bulged G |
| 11 |
Motif group IL_85053.1
Basepair signature:
|
57.87 | -21.51 | 5 | 1 |
Single bulged G |
| 12 |
Motif group IL_99645.1
Basepair signature:
|
57.12 | -21.70 | 4 | 1 |
Single bulged G |
| 13 |
Motif group IL_94181.3
Basepair signature:
|
56.18 | 15.43 | 3 | 1 |
Intercalated cWS |
| 14 |
Motif group IL_96600.1
Basepair signature:
|
54.87 | 7.09 | 4 | 1 |
Single bulged U |
| 15 |
Motif group IL_19557.1
Basepair signature:
|
54.49 | -10.85 | 5 | 1 |
|
| 16 |
Motif group IL_81328.5
Basepair signature:
|
54.49 | -25.27 | 3 | 1 |
Major groove intercalation |
| 17 |
Motif group IL_40508.3
Basepair signature:
|
54.12 | -33.48 | 4 | 1 |
Major groove intercalation |
| 18 |
Motif group IL_14266.1
Basepair signature:
|
53.93 | -23.40 | 4 | 1 |
|
| 19 |
Motif group IL_60676.4
Basepair signature:
|
53.75 | -21.90 | 4 | 1 |
|
| 20 |
Motif group IL_80663.8
Basepair signature:
|
50.00 | -38.52 | 2 | 1 |
Major groove platform |
| 21 |
Motif group IL_61258.7
Basepair signature:
|
49.06 | -28.09 | 3 | 1 |
Single bulged C |
| 22 |
Motif group IL_06437.8
Basepair signature:
|
48.31 | -56.00 | 2 | 1 |
Minor groove platform |
| 23 |
Motif group IL_71960.4
Basepair signature:
|
47.94 | -33.66 | 5 | 1 |
Minor groove platform |
| 24 |
Motif group IL_80007.14
Basepair signature:
|
47.75 | -34.28 | 2 | 1 |
Single bulged A |
| 25 |
Motif group IL_03932.2
Basepair signature:
|
46.63 | -46.37 | 4 | 1 |
Major groove platform with intercalation |
| 26 |
Motif group IL_91036.1
Basepair signature:
|
33.90 | -59.08 | 4 | 2 |
|
| 27 |
Motif group IL_19389.4
Basepair signature:
|
29.40 | -94.22 | 3 | 2 |
Major groove platform with intercalated tWH |
| 28 |
Motif group IL_01312.10
Basepair signature:
|
28.09 | -36.42 | 1 | 1 |
Isolated non-canonical cWW pair |
| 29 |
Motif group IL_37181.1
Basepair signature:
|
24.91 | -54.28 | 4 | 2 |
Isolated non-canonical cWW pair |
| 30 |
Motif group IL_04106.2
Basepair signature:
|
24.72 | -51.05 | 4 | 2 |
Isolated non-canonical cWW pair |
| 31 |
Motif group IL_42589.5
Basepair signature:
|
23.78 | -79.82 | 2 | 1 |
Isolated cWH basepair |
| 32 |
Motif group IL_10543.1
Basepair signature:
|
18.35 | -32.28 | 4 | 2 |
Isolated non-canonical cWW contact |
| 33 |
Motif group IL_67621.4
Basepair signature:
|
16.29 | -59.25 | 3 | 1 |
Isolated cWS basepair |
| 34 |
Motif group IL_16160.1
Basepair signature:
|
15.92 | -38.14 | 4 | 2 |
Isolated non-canonical cWW pair |
| 35 |
Motif group IL_51971.1
Basepair signature:
|
13.86 | -37.05 | 4 | 2 |
Isolated non-canonical cWW contact |
| 36 |
Motif group IL_80617.1
Basepair signature:
|
13.86 | -37.05 | 4 | 2 |
Isolated non-canonical cWW contact |
| 37 |
Motif group IL_54997.4
Basepair signature:
|
13.86 | -77.85 | 4 | 2 |
Isolated tWW turn |
| 38 |
Motif group IL_77341.1
Basepair signature:
|
13.67 | -38.02 | 6 | 2 |
|
| 39 |
Motif group IL_24590.1
Basepair signature:
|
12.55 | -66.94 | 5 | 2 |
|
| 40 |
Motif group IL_02284.2
Basepair signature:
|
10.67 | -43.22 | 5 | 2 |
|
| 41 |
Motif group IL_38958.5
Basepair signature:
|
10.67 | -70.68 | 4 | 2 |
Isolated tHS basepair with bulges |
| 42 |
Motif group IL_23544.2
Basepair signature:
|
9.18 | -65.76 | 4 | 3 |
|
| 43 |
Motif group IL_02060.2
Basepair signature:
|
9.18 | -86.24 | 3 | 1 |
Major groove platform |
| 44 |
Motif group IL_83121.6
Basepair signature:
|
3.18 | -859.13 | 4 | 2 |
|
| 45 |
Motif group IL_55658.1
Basepair signature:
|
2.81 | -74.69 | 5 | 2 |
|
| 46 |
Motif group IL_81326.2
Basepair signature:
|
2.81 | -83.42 | 4 | 2 |
|
| 47 |
Motif group IL_07342.2
Basepair signature:
|
2.43 | -170.88 | 4 | 2 |
Bulged stacked bases |
| 48 |
Motif group IL_65075.1
Basepair signature:
|
2.25 | -57.86 | 5 | 2 |
|
| 49 |
Motif group IL_14148.3
Basepair signature:
|
2.06 | -145.33 | 4 | 2 |
Minor groove platform with extra cWW |
| 50 |
Motif group IL_34626.3
Basepair signature:
|
1.69 | -83.37 | 5 | 2 |
|
| 51 |
Motif group IL_27900.1
Basepair signature:
|
1.69 | -123.42 | 4 | 2 |
Minor groove platform |
| 52 |
Motif group IL_78030.1
Basepair signature:
|
1.50 | -88.99 | 5 | 3 |
|
| 53 |
Motif group IL_87630.3
Basepair signature:
|
1.50 | -141.80 | 4 | 2 |
Major groove platform with extra pair |
| 54 |
Motif group IL_42521.1
Basepair signature:
|
1.31 | -79.74 | 5 | 3 |
|
| 55 |
Motif group IL_99373.2
Basepair signature:
|
1.31 | -113.10 | 4 | 2 |
|
| 56 |
Motif group IL_67474.2
Basepair signature:
|
0.94 | -76.10 | 4 | 2 |
|
| 57 |
Motif group IL_76195.1
Basepair signature:
|
0.94 | -82.06 | 5 | 2 |
|
| 58 |
Motif group IL_07931.4
Basepair signature:
|
0.94 | -130.67 | 5 | 3 |
|
| 59 |
Motif group IL_95485.5
Basepair signature:
|
0.94 | -136.89 | 4 | 2 |
Major groove platform with extra cWW |
| 60 |
Motif group IL_23663.4
Basepair signature:
|
0.75 | -154.76 | 5 | 3 |
|
| 61 |
Motif group IL_08376.2
Basepair signature:
|
0.75 | -452.13 | 5 | 4 |
C-loop |
| 62 |
Motif group IL_81522.1
Basepair signature:
|
0.56 | -172.28 | 6 | 4 |
Major groove minor groove platform with intercalation; mini C-loop |
| 63 |
Motif group IL_93270.1
Basepair signature:
|
0.56 | -462.73 | 6 | 4 |
Minor groove platform |
| 64 |
Motif group IL_63596.2
Basepair signature:
|
0.56 | -7834.22 | 5 | 3 |
C-loop |
| 65 |
Motif group IL_92604.1
Basepair signature:
|
0.37 | -107.24 | 5 | 3 |
|
| 66 |
Motif group IL_61017.1
Basepair signature:
|
0.37 | -109.36 | 5 | 3 |
|
| 67 |
Motif group IL_94431.4
Basepair signature:
|
0.37 | -170.56 | 3 | 2 |
Minor groove platform |
| 68 |
Motif group IL_85877.9
Basepair signature:
|
0.37 | -195.23 | 3 | 3 |
Tandem non-canonical cWW pairs |
| 69 |
Motif group IL_98736.1
Basepair signature:
|
0.19 | -78.75 | 7 | 3 |
Self complementary |
| 70 |
Motif group IL_31890.1
Basepair signature:
|
0.19 | -93.58 | 6 | 4 |
|
| 71 |
Motif group IL_18459.1
Basepair signature:
|
0.19 | -96.18 | 5 | 2 |
|
| 72 |
Motif group IL_61242.1
Basepair signature:
|
0.19 | -121.37 | 7 | 5 |
|
| 73 |
Motif group IL_78994.1
Basepair signature:
|
0.19 | -123.99 | 5 | 3 |
|
| 74 |
Motif group IL_36143.2
Basepair signature:
|
0.19 | -124.32 | 6 | 3 |
|
| 75 |
Motif group IL_01963.1
Basepair signature:
|
0.19 | -124.82 | 7 | 5 |
|
| 76 |
Motif group IL_74980.1
Basepair signature:
|
0.19 | -132.69 | 7 | 5 |
|
| 77 |
Motif group IL_97601.6
Basepair signature:
|
0.19 | -142.74 | 5 | 3 |
Receptor of 11-nt loop-receptor motif |
| 78 |
Motif group IL_84158.1
Basepair signature:
|
0.19 | -146.72 | 5 | 3 |
Tandem non-canonical cWW pairs |
| 79 |
Motif group IL_74736.1
Basepair signature:
|
0.19 | -157.45 | 8 | 6 |
|
| 80 |
Motif group IL_38634.3
Basepair signature:
|
0.19 | -208.98 | 6 | 5 |
cWH basepair and non-canonical AC |
| 81 |
Motif group IL_15795.1
Basepair signature:
|
0.19 | -225.52 | 5 | 3 |
Minor groove platform |
| 82 |
Motif group IL_70995.5
Basepair signature:
|
0.19 | -254.05 | 3 | 2 |
Major groove platform; stack outside cWW |
| 83 |
Motif group IL_96042.3
Basepair signature:
|
0.19 | -260.09 | 5 | 3 |
Major groove minor groove platform with extra cWW |
| 84 |
Motif group IL_09061.3
Basepair signature:
|
0.19 | -270.58 | 3 | 2 |
Major groove minor groove platform; mini C-loop |
| 85 |
Motif group IL_53529.1
Basepair signature:
|
0.19 | -318.60 | 6 | 4 |
|
| 86 |
Motif group IL_45289.1
Basepair signature:
|
0.19 | -457.64 | 7 | 4 |
|
| 87 |
Motif group IL_28060.3
Basepair signature:
|
0.19 | -9272.03 | 6 | 4 |
Major groove minor groove platform with tHH |
| 88 |
Motif group IL_50789.1
Basepair signature:
|
0.00 | -100.64 | 6 | 4 |
|
| 89 |
Motif group IL_28564.1
Basepair signature:
|
0.00 | -102.49 | 5 | 4 |
|
| 90 |
Motif group IL_35310.1
Basepair signature:
|
0.00 | -106.96 | 5 | 3 |
Bulged stacked bases |
| 91 |
Motif group IL_92343.1
Basepair signature:
|
0.00 | -113.95 | 7 | 5 |
|
| 92 |
Motif group IL_46732.1
Basepair signature:
|
0.00 | -114.80 | 7 | 4 |
|
| 93 |
Motif group IL_77771.1
Basepair signature:
|
0.00 | -116.64 | 5 | 2 |
|
| 94 |
Motif group IL_60695.5
Basepair signature:
|
0.00 | -121.88 | 7 | 5 |
|
| 95 |
Motif group IL_06300.1
Basepair signature:
|
0.00 | -127.07 | 6 | 4 |
|
| 96 |
Motif group IL_34915.2
Basepair signature:
|
0.00 | -130.17 | 6 | 4 |
Receptor of 11-nt loop-receptor motif |
| 97 |
Motif group IL_39507.1
Basepair signature:
|
0.00 | -131.09 | 8 | 5 |
|
| 98 |
Motif group IL_61084.1
Basepair signature:
|
0.00 | -131.17 | 8 | 5 |
|
| 99 |
Motif group IL_09732.5
Basepair signature:
|
0.00 | -131.81 | 6 | 4 |
|
| 100 |
Motif group IL_68741.1
Basepair signature:
|
0.00 | -133.14 | 5 | 3 |
|
| 101 |
Motif group IL_90348.1
Basepair signature:
|
0.00 | -133.64 | 5 | 4 |
|
| 102 |
Motif group IL_70096.1
Basepair signature:
|
0.00 | -135.58 | 7 | 5 |
Kink-turn related |
| 103 |
Motif group IL_20549.1
Basepair signature:
|
0.00 | -138.92 | 6 | 4 |
Receptor of 11-nt loop-receptor motif |
| 104 |
Motif group IL_03470.1
Basepair signature:
|
0.00 | -139.86 | 6 | 4 |
|
| 105 |
Motif group IL_23934.1
Basepair signature:
|
0.00 | -142.72 | 6 | 5 |
tSH-tHW |
| 106 |
Motif group IL_46401.1
Basepair signature:
|
0.00 | -143.08 | 9 | 6 |
|
| 107 |
Motif group IL_70480.1
Basepair signature:
|
0.00 | -146.54 | 8 | 6 |
|
| 108 |
Motif group IL_62827.1
Basepair signature:
|
0.00 | -147.91 | 8 | 6 |
cWH basepair with bulged bases |
| 109 |
Motif group IL_53034.1
Basepair signature:
|
0.00 | -149.37 | 5 | 4 |
|
| 110 |
Motif group IL_81215.2
Basepair signature:
|
0.00 | -149.43 | 6 | 4 |
|
| 111 |
Motif group IL_38810.1
Basepair signature:
|
0.00 | -149.46 | 6 | 4 |
|
| 112 |
Motif group IL_66745.4
Basepair signature:
|
0.00 | -149.69 | 6 | 5 |
|
| 113 |
Motif group IL_80884.1
Basepair signature:
|
0.00 | -149.95 | 8 | 6 |
|
| 114 |
Motif group IL_47108.1
Basepair signature:
|
0.00 | -153.04 | 7 | 6 |
|
| 115 |
Motif group IL_50676.4
Basepair signature:
|
0.00 | -153.12 | 5 | 3 |
Tandem non-canonical cWW pairs |
| 116 |
Motif group IL_61275.1
Basepair signature:
|
0.00 | -153.82 | 7 | 6 |
|
| 117 |
Motif group IL_82988.1
Basepair signature:
|
0.00 | -154.02 | 7 | 5 |
|
| 118 |
Motif group IL_08296.2
Basepair signature:
|
0.00 | -154.49 | 6 | 5 |
UAA/GAN related, with intercalation |
| 119 |
Motif group IL_96860.1
Basepair signature:
|
0.00 | -154.80 | 7 | 5 |
|
| 120 |
Motif group IL_69421.1
Basepair signature:
|
0.00 | -156.65 | 6 | 4 |
|
| 121 |
Motif group IL_79393.7
Basepair signature:
|
0.00 | -157.60 | 7 | 6 |
|
| 122 |
Motif group IL_48280.1
Basepair signature:
|
0.00 | -161.07 | 6 | 4 |
|
| 123 |
Motif group IL_19724.1
Basepair signature:
|
0.00 | -165.45 | 5 | 3.5 |
|
| 124 |
Motif group IL_94351.1
Basepair signature:
|
0.00 | -165.97 | 8 | 6 |
|
| 125 |
Motif group IL_73399.1
Basepair signature:
|
0.00 | -167.12 | 7 | 6 |
|
| 126 |
Motif group IL_47002.1
Basepair signature:
|
0.00 | -167.41 | 7 | 6 |
|
| 127 |
Motif group IL_24905.8
Basepair signature:
|
0.00 | -169.29 | 7 | 5 |
|
| 128 |
Motif group IL_58346.1
Basepair signature:
|
0.00 | -169.95 | 7 | 6 |
|
| 129 |
Motif group IL_72416.1
Basepair signature:
|
0.00 | -170.57 | 7 | 6 |
|
| 130 |
Motif group IL_44325.1
Basepair signature:
|
0.00 | -170.76 | 6 | 3 |
|
| 131 |
Motif group IL_70627.1
Basepair signature:
|
0.00 | -172.79 | 7 | 6 |
UAA/GAN related |
| 132 |
Motif group IL_42092.1
Basepair signature:
|
0.00 | -174.17 | 7 | 5 |
Isolated basepair with bulged bases |
| 133 |
Motif group IL_19569.2
Basepair signature:
|
0.00 | -174.99 | 7 | 5 |
|
| 134 |
Motif group IL_90720.1
Basepair signature:
|
0.00 | -175.45 | 7 | 5 |
|
| 135 |
Motif group IL_64842.1
Basepair signature:
|
0.00 | -176.26 | 8 | 6 |
|
| 136 |
Motif group IL_95811.1
Basepair signature:
|
0.00 | -178.67 | 8 | 6 |
Vitamin B12 Aptamer |
| 137 |
Motif group IL_89587.1
Basepair signature:
|
0.00 | -178.91 | 7 | 6 |
|
| 138 |
Motif group IL_88269.2
Basepair signature:
|
0.00 | -180.99 | 7.5 | 6 |
6x5 Sarcin-Ricin; G-bulge |
| 139 |
Motif group IL_69979.1
Basepair signature:
|
0.00 | -181.27 | 9 | 7 |
|
| 140 |
Motif group IL_80412.1
Basepair signature:
|
0.00 | -183.56 | 8 | 7 |
|
| 141 |
Motif group IL_08939.1
Basepair signature:
|
0.00 | -183.65 | 7 | 5 |
|
| 142 |
Motif group IL_83162.2
Basepair signature:
|
0.00 | -186.08 | 7 | 6 |
tHS double platform |
| 143 |
Motif group IL_51087.2
Basepair signature:
|
0.00 | -186.71 | 5 | 4 |
|
| 144 |
Motif group IL_56105.1
Basepair signature:
|
0.00 | -188.41 | 6 | 3 |
|
| 145 |
Motif group IL_98876.1
Basepair signature:
|
0.00 | -189.78 | 9 | 8 |
|
| 146 |
Motif group IL_98711.1
Basepair signature:
|
0.00 | -191.78 | 8 | 6 |
tSH-tHW-tWW |
| 147 |
Motif group IL_79734.1
Basepair signature:
|
0.00 | -192.36 | 7 | 5 |
|
| 148 |
Motif group IL_17971.1
Basepair signature:
|
0.00 | -192.87 | 10 | 9 |
|
| 149 |
Motif group IL_38969.1
Basepair signature:
|
0.00 | -192.96 | 10 | 7 |
Reverse kink-turn related |
| 150 |
Motif group IL_90157.1
Basepair signature:
|
0.00 | -193.68 | 10 | 8 |
|
| 151 |
Motif group IL_97697.1
Basepair signature:
|
0.00 | -195.64 | 9 | 8 |
Reverse turn |
| 152 |
Motif group IL_74184.1
Basepair signature:
|
0.00 | -195.86 | 9 | 7 |
|
| 153 |
Motif group IL_05523.1
Basepair signature:
|
0.00 | -200.44 | 8 | 6 |
|
| 154 |
Motif group IL_14397.1
Basepair signature:
|
0.00 | -201.98 | 8 | 7 |
|
| 155 |
Motif group IL_27393.6
Basepair signature:
|
0.00 | -204.18 | 8 | 6 |
|
| 156 |
Motif group IL_90600.1
Basepair signature:
|
0.00 | -205.72 | 6 | 4 |
|
| 157 |
Motif group IL_34907.1
Basepair signature:
|
0.00 | -207.23 | 6 | 5 |
UAA/GAN |
| 158 |
Motif group IL_74719.1
Basepair signature:
|
0.00 | -208.40 | 7 | 5 |
Double sheared |
| 159 |
Motif group IL_89193.1
Basepair signature:
|
0.00 | -208.59 | 9 | 7 |
5x5 Sarcin-Ricin with intercalated A; G-bulge |
| 160 |
Motif group IL_90106.3
Basepair signature:
|
0.00 | -210.26 | 5 | 4 |
|
| 161 |
Motif group IL_29978.3
Basepair signature:
|
0.00 | -210.71 | 7 | 5 |
|
| 162 |
Motif group IL_47154.3
Basepair signature:
|
0.00 | -210.97 | 7 | 5 |
|
| 163 |
Motif group IL_77870.1
Basepair signature:
|
0.00 | -211.05 | 9 | 8 |
|
| 164 |
Motif group IL_08757.2
Basepair signature:
|
0.00 | -213.59 | 5 | 4 |
tSH-tHW |
| 165 |
Motif group IL_29821.1
Basepair signature:
|
0.00 | -214.46 | 8 | 7 |
UAA/GAN with extra stack |
| 166 |
Motif group IL_66497.1
Basepair signature:
|
0.00 | -214.49 | 10 | 9 |
|
| 167 |
Motif group IL_87677.1
Basepair signature:
|
0.00 | -217.85 | 10 | 8 |
tWH-tWH-tHW-tHW |
| 168 |
Motif group IL_70801.1
Basepair signature:
|
0.00 | -218.99 | 9 | 8 |
|
| 169 |
Motif group IL_96878.1
Basepair signature:
|
0.00 | -219.16 | 9 | 8 |
|
| 170 |
Motif group IL_11882.1
Basepair signature:
|
0.00 | -219.25 | 10 | 8 |
|
| 171 |
Motif group IL_09705.6
Basepair signature:
|
0.00 | -219.59 | 4 | 3 |
Double sheared |
| 172 |
Motif group IL_58103.4
Basepair signature:
|
0.00 | -219.80 | 6 | 4 |
Symmetric double minor groove platform |
| 173 |
Motif group IL_95688.1
Basepair signature:
|
0.00 | -220.40 | 9 | 7 |
|
| 174 |
Motif group IL_53523.4
Basepair signature:
|
0.00 | -221.09 | 5 | 5 |
UAA/GAN |
| 175 |
Motif group IL_17470.4
Basepair signature:
|
0.00 | -222.64 | 9 | 8 |
tHW-tHW cross-strand stack |
| 176 |
Motif group IL_57188.2
Basepair signature:
|
0.00 | -224.42 | 9 | 7 |
Kink-turn related |
| 177 |
Motif group IL_76308.3
Basepair signature:
|
0.00 | -224.69 | 8 | 7 |
tSH-tWH-tHS-cWW |
| 178 |
Motif group IL_01502.1
Basepair signature:
|
0.00 | -226.05 | 10 | 9 |
|
| 179 |
Motif group IL_14526.1
Basepair signature:
|
0.00 | -227.25 | 6 | 4 |
tWW and non-canonical cWW |
| 180 |
Motif group IL_95993.1
Basepair signature:
|
0.00 | -229.36 | 10 | 9 |
Kink-turn related |
| 181 |
Motif group IL_93094.1
Basepair signature:
|
0.00 | -229.75 | 9 | 7 |
Reverse kink-turn |
| 182 |
Motif group IL_64879.1
Basepair signature:
|
0.00 | -229.79 | 8 | 7 |
Triple sheared related |
| 183 |
Motif group IL_84315.1
Basepair signature:
|
0.00 | -231.98 | 8 | 6 |
|
| 184 |
Motif group IL_56501.1
Basepair signature:
|
0.00 | -233.09 | 9 | 8 |
7x6 Sarcin-Ricin with UU cWW pair; G-bulge |
| 185 |
Motif group IL_04736.1
Basepair signature:
|
0.00 | -233.77 | 10 | 9 |
|
| 186 |
Motif group IL_65876.1
Basepair signature:
|
0.00 | -234.13 | 9 | 8 |
Kink-turn |
| 187 |
Motif group IL_86040.1
Basepair signature:
|
0.00 | -234.16 | 6 | 4 |
|
| 188 |
Motif group IL_32181.1
Basepair signature:
|
0.00 | -235.18 | 13 | 11 |
|
| 189 |
Motif group IL_68057.1
Basepair signature:
|
0.00 | -237.06 | 9 | 8 |
Kink-turn |
| 190 |
Motif group IL_52451.9
Basepair signature:
|
0.00 | -238.52 | 6 | 4 |
|
| 191 |
Motif group IL_55666.1
Basepair signature:
|
0.00 | -239.13 | 6 | 4 |
|
| 192 |
Motif group IL_39443.1
Basepair signature:
|
0.00 | -239.55 | 9 | 8 |
|
| 193 |
Motif group IL_97253.1
Basepair signature:
|
0.00 | -239.72 | 10 | 9 |
|
| 194 |
Motif group IL_35058.1
Basepair signature:
|
0.00 | -240.23 | 8 | 6 |
Symmetric double minor groove platform |
| 195 |
Motif group IL_55953.2
Basepair signature:
|
0.00 | -242.82 | 9 | 7 |
|
| 196 |
Motif group IL_53318.1
Basepair signature:
|
0.00 | -243.51 | 8 | 7 |
|
| 197 |
Motif group IL_03420.1
Basepair signature:
|
0.00 | -244.05 | 10 | 9 |
tSH-tHS-tHW |
| 198 |
Motif group IL_74051.1
Basepair signature:
|
0.00 | -244.60 | 9 | 7 |
Kink-turn |
| 199 |
Motif group IL_89197.1
Basepair signature:
|
0.00 | -245.21 | 9 | 8 |
|
| 200 |
Motif group IL_46112.1
Basepair signature:
|
0.00 | -245.61 | 9 | 7 |
|
| 201 |
Motif group IL_62654.1
Basepair signature:
|
0.00 | -246.06 | 8 | 6 |
tSH-tHH-tHS |
| 202 |
Motif group IL_55662.1
Basepair signature:
|
0.00 | -247.31 | 10 | 8 |
|
| 203 |
Motif group IL_93585.1
Basepair signature:
|
0.00 | -249.22 | 8.5 | 6 |
Kink-turn related |
| 204 |
Motif group IL_54896.1
Basepair signature:
|
0.00 | -250.40 | 11 | 9 |
|
| 205 |
Motif group IL_36582.1
Basepair signature:
|
0.00 | -250.68 | 10 | 9 |
8x6 Sarcin-Ricin with inserted A; G-bulge |
| 206 |
Motif group IL_45034.1
Basepair signature:
|
0.00 | -251.03 | 9 | 6 |
|
| 207 |
Motif group IL_22436.1
Basepair signature:
|
0.00 | -253.59 | 10 | 9 |
Kink-turn related |
| 208 |
Motif group IL_96942.1
Basepair signature:
|
0.00 | -254.18 | 12 | 10 |
|
| 209 |
Motif group IL_01560.1
Basepair signature:
|
0.00 | -255.23 | 9 | 7 |
|
| 210 |
Motif group IL_51877.1
Basepair signature:
|
0.00 | -255.74 | 10 | 8 |
|
| 211 |
Motif group IL_85630.1
Basepair signature:
|
0.00 | -257.04 | 11 | 10 |
|
| 212 |
Motif group IL_42032.1
Basepair signature:
|
0.00 | -257.16 | 9 | 6 |
|
| 213 |
Motif group IL_66414.4
Basepair signature:
|
0.00 | -257.68 | 9 | 9 |
Triple sheared with non-canonical cWW |
| 214 |
Motif group IL_69457.1
Basepair signature:
|
0.00 | -258.41 | 10 | 8 |
|
| 215 |
Motif group IL_65320.1
Basepair signature:
|
0.00 | -259.27 | 12 | 10 |
|
| 216 |
Motif group IL_35110.4
Basepair signature:
|
0.00 | -259.33 | 8 | 8 |
7x6 Sarcin-Ricin; G-bulge |
| 217 |
Motif group IL_52729.1
Basepair signature:
|
0.00 | -259.69 | 10 | 8 |
|
| 218 |
Motif group IL_60171.1
Basepair signature:
|
0.00 | -264.79 | 6 | 4 |
Major groove platform; stack outside cWW |
| 219 |
Motif group IL_93830.2
Basepair signature:
|
0.00 | -266.08 | 10 | 9 |
7x7 Sarcin-Ricin with intercalated A; G-bulge |
| 220 |
Motif group IL_19954.1
Basepair signature:
|
0.00 | -266.48 | 8 | 7 |
|
| 221 |
Motif group IL_33557.1
Basepair signature:
|
0.00 | -267.27 | 12 | 10 |
Kink-turn related |
| 222 |
Motif group IL_59423.1
Basepair signature:
|
0.00 | -267.73 | 7 | 6 |
|
| 223 |
Motif group IL_24606.1
Basepair signature:
|
0.00 | -268.44 | 10 | 9 |
8x6 Sarcin-Ricin with inserted Y; G-bulge |
| 224 |
Motif group IL_02349.4
Basepair signature:
|
0.00 | -270.22 | 11 | 9 |
8x6 Sarcin-Ricin with bulged A; G-bulge |
| 225 |
Motif group IL_54670.1
Basepair signature:
|
0.00 | -272.50 | 10 | 8 |
tSH-tSH-tHH-tHS |
| 226 |
Motif group IL_16109.3
Basepair signature:
|
0.00 | -272.78 | 7 | 6 |
5x5 Sarcin-Ricin with intercalated A; G-bulge |
| 227 |
Motif group IL_63750.1
Basepair signature:
|
0.00 | -276.09 | 10 | 8 |
|
| 228 |
Motif group IL_74353.1
Basepair signature:
|
0.00 | -277.14 | 9 | 8 |
Triple sheared with non-canonical cWW |
| 229 |
Motif group IL_09129.1
Basepair signature:
|
0.00 | -277.42 | 10 | 9 |
|
| 230 |
Motif group IL_74271.1
Basepair signature:
|
0.00 | -278.14 | 10 | 8 |
|
| 231 |
Motif group IL_94518.4
Basepair signature:
|
0.00 | -278.19 | 8 | 7 |
|
| 232 |
Motif group IL_98353.1
Basepair signature:
|
0.00 | -278.36 | 8 | 7 |
|
| 233 |
Motif group IL_81389.2
Basepair signature:
|
0.00 | -279.44 | 6 | 5 |
UAA/GAN related |
| 234 |
Motif group IL_29509.1
Basepair signature:
|
0.00 | -279.78 | 11 | 10 |
8x7 Sarcin-Ricin; G-bulge |
| 235 |
Motif group IL_96596.1
Basepair signature:
|
0.00 | -284.15 | 10 | 9 |
|
| 236 |
Motif group IL_18894.1
Basepair signature:
|
0.00 | -284.75 | 8 | 7 |
Quadruple sheared |
| 237 |
Motif group IL_19023.1
Basepair signature:
|
0.00 | -284.84 | 11 | 9 |
|
| 238 |
Motif group IL_49767.3
Basepair signature:
|
0.00 | -285.06 | 8 | 7 |
UAA/GAN with extra cWW |
| 239 |
Motif group IL_92440.4
Basepair signature:
|
0.00 | -287.53 | 10 | 10 |
tWH-tWH-tHW-tHW |
| 240 |
Motif group IL_51590.1
Basepair signature:
|
0.00 | -289.59 | 6 | 4 |
C-loop with extra cWW pair |
| 241 |
Motif group IL_76900.1
Basepair signature:
|
0.00 | -291.71 | 10 | 9 |
Kink-turn |
| 242 |
Motif group IL_64900.1
Basepair signature:
|
0.00 | -294.61 | 11 | 10 |
Kink-turn |
| 243 |
Motif group IL_58960.1
Basepair signature:
|
0.00 | -297.74 | 8.5 | 6 |
|
| 244 |
Motif group IL_12750.1
Basepair signature:
|
0.00 | -298.34 | 13 | 11 |
|
| 245 |
Motif group IL_04346.4
Basepair signature:
|
0.00 | -301.04 | 10 | 10 |
8x7 Sarcin-Ricin; G-bulge |
| 246 |
Motif group IL_45481.1
Basepair signature:
|
0.00 | -302.22 | 13 | 12 |
|
| 247 |
Motif group IL_04667.1
Basepair signature:
|
0.00 | -302.60 | 12 | 11 |
Kink-turn related |
| 248 |
Motif group IL_82426.3
Basepair signature:
|
0.00 | -303.35 | 13 | 12 |
Part of G-quadruplex |
| 249 |
Motif group IL_18369.2
Basepair signature:
|
0.00 | -303.52 | 6 | 4 |
|
| 250 |
Motif group IL_10517.1
Basepair signature:
|
0.00 | -306.85 | 11 | 10 |
|
| 251 |
Motif group IL_90538.2
Basepair signature:
|
0.00 | -307.37 | 10 | 9 |
Kink-turn |
| 252 |
Motif group IL_68633.1
Basepair signature:
|
0.00 | -307.76 | 12 | 11 |
9x7 Sarcin-Ricin with inserted C; G-bulge |
| 253 |
Motif group IL_53738.1
Basepair signature:
|
0.00 | -308.14 | 12 | 10 |
Pseudoknot |
| 254 |
Motif group IL_45944.2
Basepair signature:
|
0.00 | -310.02 | 10 | 8 |
|
| 255 |
Motif group IL_29549.7
Basepair signature:
|
0.00 | -310.58 | 9 | 8 |
Kink-turn |
| 256 |
Motif group IL_87284.1
Basepair signature:
|
0.00 | -310.73 | 9 | 8 |
tSH-tHW-tWH-tHS |
| 257 |
Motif group IL_16456.1
Basepair signature:
|
0.00 | -312.99 | 10 | 8 |
Kink-turn |
| 258 |
Motif group IL_36973.4
Basepair signature:
|
0.00 | -313.05 | 10 | 10 |
|
| 259 |
Motif group IL_90922.1
Basepair signature:
|
0.00 | -314.70 | 9 | 8 |
Kink-turn |
| 260 |
Motif group IL_51265.1
Basepair signature:
|
0.00 | -314.79 | 8 | 7 |
Kink-turn from U4 |
| 261 |
Motif group IL_59724.1
Basepair signature:
|
0.00 | -315.05 | 11 | 10 |
8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge |
| 262 |
Motif group IL_86428.1
Basepair signature:
|
0.00 | -316.77 | 8 | 8 |
|
| 263 |
Motif group IL_37722.1
Basepair signature:
|
0.00 | -318.83 | 11 | 10 |
|
| 264 |
Motif group IL_56867.1
Basepair signature:
|
0.00 | -321.11 | 13 | 12 |
|
| 265 |
Motif group IL_90991.4
Basepair signature:
|
0.00 | -323.04 | 6 | 3 |
Multiple bulged bases |
| 266 |
Motif group IL_15978.1
Basepair signature:
|
0.00 | -324.94 | 11 | 9 |
|
| 267 |
Motif group IL_19048.1
Basepair signature:
|
0.00 | -328.30 | 11 | 10 |
|
| 268 |
Motif group IL_55896.1
Basepair signature:
|
0.00 | -329.83 | 8 | 6 |
Triple sheared |
| 269 |
Motif group IL_89055.1
Basepair signature:
|
0.00 | -331.55 | 14 | 13 |
|
| 270 |
Motif group IL_66584.4
Basepair signature:
|
0.00 | -332.52 | 9 | 8 |
tSH-tSH-tHH-tHS |
| 271 |
Motif group IL_68780.2
Basepair signature:
|
0.00 | -333.27 | 10 | 9 |
Kink-turn |
| 272 |
Motif group IL_15861.5
Basepair signature:
|
0.00 | -334.08 | 7 | 6 |
SSU/LSU pseudoknot |
| 273 |
Motif group IL_69573.1
Basepair signature:
|
0.00 | -334.89 | 13 | 12 |
|
| 274 |
Motif group IL_85931.1
Basepair signature:
|
0.00 | -336.06 | 10 | 9 |
Kink-turn |
| 275 |
Motif group IL_41593.1
Basepair signature:
|
0.00 | -338.04 | 12 | 11 |
|
| 276 |
Motif group IL_69091.1
Basepair signature:
|
0.00 | -340.39 | 13 | 12 |
|
| 277 |
Motif group IL_22863.1
Basepair signature:
|
0.00 | -341.10 | 13 | 12 |
tSH-tHW-tHH-tHS |
| 278 |
Motif group IL_58819.1
Basepair signature:
|
0.00 | -343.68 | 14 | 12 |
|
| 279 |
Motif group IL_61812.1
Basepair signature:
|
0.00 | -349.61 | 13 | 12 |
9x8 Sarcin-Ricin; G-bulge |
| 280 |
Motif group IL_00559.1
Basepair signature:
|
0.00 | -355.59 | 17 | 15 |
|
| 281 |
Motif group IL_94501.1
Basepair signature:
|
0.00 | -359.76 | 12 | 12 |
|
| 282 |
Motif group IL_18472.1
Basepair signature:
|
0.00 | -362.57 | 8 | 7 |
|
| 283 |
Motif group IL_34470.1
Basepair signature:
|
0.00 | -362.66 | 13 | 12 |
9x8 Sarcin-Ricin with GA cWW pair; G-bulge |
| 284 |
Motif group IL_39287.1
Basepair signature:
|
0.00 | -368.93 | 12 | 12 |
Kink-turn related |
| 285 |
Motif group IL_21121.1
Basepair signature:
|
0.00 | -369.40 | 10 | 8 |
|
| 286 |
Motif group IL_16702.1
Basepair signature:
|
0.00 | -372.17 | 12 | 11 |
|
| 287 |
Motif group IL_17069.2
Basepair signature:
|
0.00 | -372.64 | 12 | 11 |
Kink-turn related |
| 288 |
Motif group IL_89731.1
Basepair signature:
|
0.00 | -372.89 | 8 | 7 |
|
| 289 |
Motif group IL_45257.1
Basepair signature:
|
0.00 | -374.54 | 12 | 11 |
|
| 290 |
Motif group IL_39521.4
Basepair signature:
|
0.00 | -374.65 | 6 | 5 |
tSH-tWH-tHS |
| 291 |
Motif group IL_58390.1
Basepair signature:
|
0.00 | -376.67 | 10 | 9 |
Minor groove platform related |
| 292 |
Motif group IL_20463.1
Basepair signature:
|
0.00 | -381.42 | 14 | 14 |
7x11 Sarcin-Ricin with pseudoknotted region; G-bulge |
| 293 |
Motif group IL_56467.5
Basepair signature:
|
0.00 | -382.27 | 6 | 5 |
Triple sheared |
| 294 |
Motif group IL_22821.1
Basepair signature:
|
0.00 | -386.80 | 16 | 15 |
Pseudoknot |
| 295 |
Motif group IL_34780.1
Basepair signature:
|
0.00 | -390.79 | 14 | 13 |
Kink-turn |
| 296 |
Motif group IL_41414.1
Basepair signature:
|
0.00 | -402.93 | 17 | 16 |
|
| 297 |
Motif group IL_34590.1
Basepair signature:
|
0.00 | -404.14 | 14 | 13 |
9x9 Sarcin-Ricin with pseudoknotted region; G-bulge |
| 298 |
Motif group IL_56455.2
Basepair signature:
|
0.00 | -407.09 | 13 | 13 |
Bacterial 5S Loop E |
| 299 |
Motif group IL_26785.1
Basepair signature:
|
0.00 | -416.87 | 14 | 13 |
10x8 Sarcin-Ricin; G-bulge |
| 300 |
Motif group IL_61300.1
Basepair signature:
|
0.00 | -417.52 | 13 | 12 |
|
| 301 |
Motif group IL_72938.1
Basepair signature:
|
0.00 | -432.04 | 5 | 3 |
8-nt loop receptor |
| 302 |
Motif group IL_31504.1
Basepair signature:
|
0.00 | -432.89 | 16 | 15 |
|
| 303 |
Motif group IL_38044.1
Basepair signature:
|
0.00 | -442.48 | 18 | 18 |
|
| 304 |
Motif group IL_13394.1
Basepair signature:
|
0.00 | -450.57 | 18 | 18 |
|
| 305 |
Motif group IL_51366.1
Basepair signature:
|
0.00 | -455.09 | 19 | 18 |
|
| 306 |
Motif group IL_24106.1
Basepair signature:
|
0.00 | -462.64 | 15 | 14 |
|
| 307 |
Motif group IL_17765.1
Basepair signature:
|
0.00 | -465.54 | 12 | 10 |
|
| 308 |
Motif group IL_47743.1
Basepair signature:
|
0.00 | -467.00 | 8 | 6 |
|
| 309 |
Motif group IL_68506.1
Basepair signature:
|
0.00 | -480.31 | 16 | 15 |
|
| 310 |
Motif group IL_53581.1
Basepair signature:
|
0.00 | -497.36 | 19 | 18 |
Kink-turn related |
| 311 |
Motif group IL_22615.1
Basepair signature:
|
0.00 | -498.07 | 20 | 20 |
|
| 312 |
Motif group IL_20245.1
Basepair signature:
|
0.00 | -512.91 | 21 | 20 |
|
| 313 |
Motif group IL_65055.1
Basepair signature:
|
0.00 | -519.07 | 22 | 21 |
|
| 314 |
Motif group IL_80355.1
Basepair signature:
|
0.00 | -527.42 | 22 | 21 |
|
| 315 |
Motif group IL_49655.1
Basepair signature:
|
0.00 | -534.78 | 22 | 21 |
|
| 316 |
Motif group IL_67834.1
Basepair signature:
|
0.00 | -551.70 | 21 | 19 |
|
| 317 |
Motif group IL_35904.1
Basepair signature:
|
0.00 | -551.97 | 10 | 8 |
Kink-turn |
| 318 |
Motif group IL_94878.1
Basepair signature:
|
0.00 | -587.16 | 24 | 23 |
|
| 319 |
Motif group IL_60992.4
Basepair signature:
|
0.00 | -607.10 | 14 | 13 |
|
| 320 |
Motif group IL_75283.1
Basepair signature:
|
0.00 | -620.77 | 15 | 14 |
|
| 321 |
Motif group IL_84409.1
Basepair signature:
|
0.00 | -662.26 | 20 | 20 |
|
| 322 |
Motif group IL_75461.2
Basepair signature:
|
0.00 | -5061.96 | 7 | 5 |
180 degree turn |