Internal Loop Motif Atlas Release 3.2

#	Motif	Num Nts	Instances
1	IL_48459.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents Isolated cWH basepair (11) Isolated non-canonical cWW with bulges (11) UU cWW (10) CA cWW (6) CC cWW (4) Intercalated tWH (3) Self complementary (2) AA cWW (2) Isolated near basepair (2) Single bulged G, near cWW (1) Multiple bulged bases, near cWW (1) CA cWW with bulged A (1) UU cWW water inserted (1) Decoding loop related (1) UG cWW (1) GU cWW (1) GA cWW (1) UC cWW (1)	6	281
2	IL_29366.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Single bulged A (69) Single bulged U (51) Single bulged G (28) Single bulged C (26) Multiple bulged bases (19) Major groove outside cWW, minor groove, intercalation pocket (5) Basepair outside cWW (3) Major groove platform outside cWW (2) Stack outside cWW (2) Intercalation pocket (1) Major groove platform (1)	4	266
3	IL_60247.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, no parents Tandem non-canonical cWW pairs (60) Non canonical cWW and near pair (1) Minor groove platform related (1)	8	62
4	IL_80663.1 View exemplar Basepair signature: cWW-tHS-cSH-cWW History status: New id, no parents Major groove platform (22) Major groove platform; stack outside cWW (8) Major groove intercalation (1)	5	50
5	IL_06437.1 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: New id, no parents Minor groove platform (44) Major groove outside cWW, minor groove, intercalation pocket (1) Single bulged A (1)	5	46
6	IL_11156.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents Single stack bend (14) Decoding loop related (9) Stack and bulge (2) Intercalated cWW (1)	5	43
7	IL_12786.1 View exemplar Basepair signature: cWW-cWH-cWW History status: New id, no parents Isolated cWH basepair (30) Self complementary (2) Isolated near basepair (2) Isolated non-canonical cWW with bulges (1) Other IL (1) cWH basepair with bulged bases (1)	6	40
8	IL_56467.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: New id, no parents Triple sheared (30) AAA cross-strand stack (5)	10	35
9	IL_29549.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW History status: New id, no parents Kink-turn (32)	12	32
10	IL_09705.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: New id, no parents Double sheared (28) Other IL (2)	8	30
11	IL_00168.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: New id, no parents Major groove minor groove platform; mini C-loop (11) C-loop (5) Major groove outside cWW, minor groove, intercalation pocket (1)	6	22
12	IL_53523.1 View exemplar Basepair signature: cWW-tWH-L-tHS-cWW History status: New id, no parents UAA/GAN (18)	9	18
13	IL_16929.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Multiple bulged bases (6) Major groove intercalation (3) Single bulged A (2) Single bulged U (1) Single bulged G (1)	4	18
14	IL_70995.1 View exemplar Basepair signature: cWW-tSH-L-cWW History status: New id, no parents Major groove platform; stack outside cWW (11)	6	17
15	IL_39521.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-cWW History status: New id, no parents tSH-tHW-tHS (15) 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)	10	16
16	IL_95485.1 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: New id, no parents Major groove platform with extra cWW (6) Isolated basepair with bulged bases (1)	7	15
17	IL_93147.1 View exemplar Basepair signature: cWW-tWH-cSH-L-cWS-cWW History status: New id, no parents C-loop (15)	7	15
18	IL_04346.1 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 8x7 Sarcin-Ricin; G-bulge (15)	15	15
19	IL_64063.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Single bulged U (4) Multiple bulged bases (2) Single bulged G (1)	4	14
20	IL_81326.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: New id, no parents Decoding loop related (2)	7	14
21	IL_35110.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 7x6 Sarcin-Ricin; G-bulge (9) Sarcin-Ricin target in LSU H95; G-bulge (5)	13	14
22	IL_10277.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents Not an internal loop (2) Major groove outside cWW, minor groove, intercalation pocket (1) Minor groove platform (1)	5	12
23	IL_37811.1 View exemplar Basepair signature: cWW-R-tSH-tHS-cWW History status: New id, no parents UAA/GAN variation (7) UAA/GAN related (5)	9	12
24	IL_67621.1 View exemplar Basepair signature: cWW-cWS-cWW History status: New id, no parents Isolated cWS basepair (7) Isolated near basepair (2)	6	12
25	IL_38958.1 View exemplar Basepair signature: cWW-tHS-cWW History status: New id, no parents Isolated tHS basepair with bulges (11)	6	11
26	IL_09818.1 View exemplar Basepair signature: cWW-tHS-cWW History status: New id, no parents Minor groove platform with intercalation (3) Minor groove platform (2) Single stack bend (1) Other IL (1)	5	11
27	IL_06251.1 View exemplar Basepair signature: cWW-tSH-cSH-cWW History status: New id, no parents Major groove platform with extra pair (7)	7	10
28	IL_15861.1 View exemplar Basepair signature: cWW-L-L-L-cSH-L-cWW History status: New id, no parents SSU/LSU pseudoknot (6)	10	10
29	IL_94431.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: New id, no parents Minor groove platform (9)	6	10
30	IL_35167.1 View exemplar Basepair signature: cWW-R-tWH-L-tHS-cWW History status: New id, no parents UAA/GAN (2) tSH-tHS-tHW (1) UAA/GAN with extra pair (1) Other IL (1)	10	10
31	IL_31933.1 View exemplar Basepair signature: cWW-tWW-cWW History status: New id, no parents Isolated tWW turn (3) Decoding loop with one bulged A (1)	6	9
32	IL_49607.1 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: New id, no parents tSH-tHW (5)	8	8
33	IL_52583.1 View exemplar Basepair signature: cWW-cWW-cSH-R-cWW History status: New id, no parents Major groove minor groove platform with extra cWW (4)	8	8
34	IL_43065.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cWW History status: New id, no parents Pseudoknot (3)	9	8
35	IL_40979.1 View exemplar Basepair signature: cWW-cWW-tWW-cWW History status: New id, no parents tWW and non-canonical cWW (6) Tandem non-canonical cWW pairs (2)	8	8
36	IL_97601.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: New id, no parents Receptor of 11-nt loop-receptor motif (5) 8-nt loop receptor (2) Other IL (1)	8	8
37	IL_50587.1 View exemplar Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: New id, no parents tSH-tHW-tHS-cWW (3) Tandem non-canonical cWW pairs with near WC pairs (1)	12	7
38	IL_66414.1 View exemplar Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW History status: New id, no parents Triple sheared with non-canonical cWW (3)	14	7
39	IL_66584.1 View exemplar Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW History status: New id, no parents tSH-tSH-tHH-tHS (2) Quadruple sheared (2)	12	7
40	IL_05466.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tSS-tHS-tHW-cWW-cWW-cWW History status: New id, no parents Kink-turn with non-sequential stacking (4) Kink-turn (3)	12	7
41	IL_17470.1 View exemplar Basepair signature: cWW-R-tHW-tHW-tWW-cWW History status: New id, no parents tHW-tHW cross-strand stack (6)	11	6
42	IL_29978.1 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW History status: New id, no parents	9	6
43	IL_15944.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents Isolated non-canonical cWW with bulges (1)	6	6
44	IL_49767.1 View exemplar Basepair signature: cWW-cWW-R-tWH-L-tHS-cWW History status: New id, no parents UAA/GAN with extra cWW (3)	12	6
45	IL_81442.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents Intercalated cWS (2) Other IL (1) Single base bend (1)	5	6
46	IL_16188.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents Single bulged A (1)	5	6
47	IL_51265.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW History status: New id, no parents Kink-turn from U4 (5) Kink-turn from T-box riboswitch (1)	10	6
48	IL_14148.1 View exemplar Basepair signature: cWW-cWW-tSH-cWW History status: New id, no parents Minor groove platform with extra cWW (5)	7	6
49	IL_34915.1 View exemplar Basepair signature: cWW-R-tWH-cSH-cWW History status: New id, no parents Receptor of 11-nt loop-receptor motif (6)	9	6
50	IL_90991.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Multiple bulged bases (3)	4	6
51	IL_47154.1 View exemplar Basepair signature: cWW-cSW-L-R-cWW History status: New id, no parents	8	6
52	IL_92103.1 View exemplar Basepair signature: cWW-cHH-cWW History status: New id, no parents Major groove platform (3) Major groove intercalation (1)	5	6
53	IL_76745.1 View exemplar Basepair signature: cWW-L-tSH-cSH-cWW History status: New id, no parents Major groove platform with intercalated tWH (3) Left turn (2) Other IL (1)	6	6
54	IL_56455.1 View exemplar Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW History status: New id, no parents Bacterial 5S Loop E (6)	18	6
55	IL_35853.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW History status: New id, no parents	12	5
56	IL_57188.1 View exemplar Basepair signature: cWW-tWW-cSH-L-tWW-cSH-cWW History status: New id, no parents	11	5
57	IL_18776.1 View exemplar Basepair signature: cWW-cWW-cSW-cWW-cWW History status: New id, no parents Minor groove platform related (1)	9	5
58	IL_23544.1 View exemplar Basepair signature: cWW-L-R-R-cWW History status: New id, no parents	7	5
59	IL_43115.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	5
60	IL_58103.1 View exemplar Basepair signature: cWW-cSH-L-cWS-tSW-R-R-cWW History status: New id, no parents Symmetric double minor groove platform (3)	10	5
61	IL_60992.1 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW History status: New id, no parents	16	5
62	IL_86605.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, no parents Tandem non-canonical cWW pairs (4)	8	5
63	IL_55953.1 View exemplar Basepair signature: cWW-tSH-R-tHS-L-bif-cWW History status: New id, no parents	12	5
64	IL_94518.1 View exemplar Basepair signature: cWW-L-R-cWW-L-R-cWW-cWW History status: New id, no parents Other IL (1)	12	5
65	IL_17069.1 View exemplar Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW History status: New id, no parents Kink-turn related (3)	13	5
66	IL_83162.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: New id, no parents	11	5
67	IL_38680.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-L-R-cWW History status: New id, no parents	12	4
68	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-L-L-L-bif-cWW History status: New id, no parents Reverse turn (4)	12	4
69	IL_01772.1 View exemplar Basepair signature: cWW-cSH-cSH-cWW History status: New id, no parents Major groove outside cWW, minor groove, intercalation pocket (2) Major groove minor groove platform; mini C-loop (1)	6	4
70	IL_09699.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: New id, no parents Isolated basepair with bulged bases (1) Major groove minor groove platform with extra cWW (1)	8	4
71	IL_81168.1 View exemplar Basepair signature: cWW-cSH-R-cWW-cWW History status: New id, no parents Other IL (1)	8	4
72	IL_85611.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: New id, no parents	10	4
73	IL_68506.1 View exemplar Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-R-cWW-cWW History status: New id, no parents	19	4
74	IL_09732.1 View exemplar Basepair signature: cWW-cWW-R-cWW History status: New id, no parents	7	4
75	IL_31196.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents Basepair outside cWW, intercalation pocket (3) Stack outside cWW (1)	5	4
76	IL_18782.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Single bulged C (1)	4	4
77	IL_60695.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: New id, no parents	8	4
78	IL_34626.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, no parents	7	4
79	IL_86802.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Single bulged A (2) Single bulged U (1)	4	4
80	IL_08296.1 View exemplar Basepair signature: cWW-tSH-R-R-cWW History status: New id, no parents	8	4
81	IL_08376.1 View exemplar Basepair signature: cWW-tWH-tSW-L-cWS-cWW History status: New id, no parents C-loop (4)	7	4
82	IL_83736.1 View exemplar Basepair signature: cWW-L-R-R-cSH-cWW History status: New id, no parents	8	3
83	IL_22310.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-L-R-L-cWW History status: New id, no parents	13	3
84	IL_52451.1 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: New id, no parents	8	3
85	IL_35419.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents	6	3
86	IL_45944.1 View exemplar Basepair signature: cWW-L-L-tWH-L-L-L-cWW History status: New id, no parents	11	3
87	IL_90106.1 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: New id, no parents	8	3
88	IL_18369.1 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: New id, no parents	8	3
89	IL_27393.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: New id, no parents	10	3
90	IL_35904.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW History status: New id, no parents Kink-turn (3)	12	3
91	IL_36143.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents	5	3
92	IL_74969.1 View exemplar Basepair signature: cWW-R-cWW History status: New id, no parents	5	3
93	IL_90538.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tSS-tHS-L-bif-cWW History status: New id, no parents Kink-turn (3)	13	3
94	IL_54678.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents	4	3
95	IL_78399.1 View exemplar Basepair signature: cWW-cWW-L-cWW-cWW-cWW History status: New id, no parents	11	3
96	IL_75283.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW History status: New id, no parents	18	3
97	IL_36973.1 View exemplar Basepair signature: cWW-tSH-R-tHS-L-bif-cWW-cWW History status: New id, no parents	14	3
98	IL_23825.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: New id, no parents	7	3
99	IL_79393.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-L-cWW History status: New id, no parents	11	3
100	IL_58535.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents Isolated non-canonical cWW with bulges (1)	6	3
101	IL_75461.1 View exemplar Basepair signature: cWW-tSS-cSS-L-R-cWW History status: New id, no parents	6	3
102	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: New id, no parents tSH-tHW-tWH-tHS (3)	12	3
103	IL_37794.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-cWW-cWW History status: New id, no parents	12	3
104	IL_58960.1 View exemplar Basepair signature: cWW-L-L-tWW-L-L-L-cWW History status: New id, no parents	11	3
105	IL_05062.1 View exemplar Basepair signature: cWW-tSH-tSH-L-R-L-cWW History status: New id, no parents Triple sheared related (3)	11	3
106	IL_24606.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW History status: New id, no parents 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)	14	3
107	IL_08966.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents CC cWW (1)	6	3
108	IL_24905.1 View exemplar Basepair signature: cWW-cSW-R-cWW History status: New id, no parents	7	3
109	IL_67474.1 View exemplar Basepair signature: cWW-R-R-cWW History status: New id, no parents	6	3
110	IL_38634.1 View exemplar Basepair signature: cWW-L-R-R-L-cWW History status: New id, no parents cWH basepair and non-canonical AC (2)	8	3
111	IL_48280.1 View exemplar Basepair signature: cWW-tSH-R-cWW History status: New id, no parents	7	3
112	IL_67703.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW History status: New id, no parents	22	2
113	IL_80884.1 View exemplar Basepair signature: cWW-cWW-R-R-R-R-cWW History status: New id, no parents	10	2
114	IL_95511.1 View exemplar Basepair signature: cWW-R-R-R-tSW-L-L-cWW History status: New id, no parents	11	2
115	IL_42712.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: New id, no parents	13	2
116	IL_64125.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: New id, no parents	8	2
117	IL_26351.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: New id, no parents tSH-tHW-tHS with extra cWW pairs (1)	14	2
118	IL_49735.1 View exemplar Basepair signature: cWW-L-R-R-cWW-cWW History status: New id, no parents	9	2
119	IL_99373.1 View exemplar Basepair signature: cWW-bif-L-cWW History status: New id, no parents	7	2
120	IL_34470.1 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)	17	2
121	IL_42898.1 View exemplar Basepair signature: cWW-tWH-tWH-tWH-cSH-tHW-tHW-cWW History status: New id, no parents tWH-tWH-tHW-tHW (1)	12	2
122	IL_64611.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: New id, no parents tSH-tHH-tHS (1)	10	2
123	IL_39448.1 View exemplar Basepair signature: cWW-cWW-L-R-tHS-cWW History status: New id, no parents	10	2
124	IL_02349.1 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: New id, no parents 8x6 Sarcin-Ricin with bulged A; G-bulge (2)	13	2
125	IL_77870.1 View exemplar Basepair signature: cWW-bif-L-L-L-tHS-cWW-cWW History status: New id, no parents	13	2
126	IL_93830.1 View exemplar Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW History status: New id, no parents 7x7 Sarcin-Ricin with intercalated A; G-bulge (2)	14	2
127	IL_16109.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tHS-cWW History status: New id, no parents 5x5 Sarcin-Ricin with intercalated A; G-bulge (2)	10	2
128	IL_57249.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: New id, no parents Isolated non-canonical cWW with bulges (1) Tandem non-canonical cWW pairs (1)	7	2
129	IL_50992.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW History status: New id, no parents 9x8 Sarcin-Ricin; G-bulge (2)	17	2
130	IL_90612.1 View exemplar Basepair signature: cWW-tWH-tWH-tWH-L-R-R-L-tWW-cWW History status: New id, no parents	14	2
131	IL_23663.1 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: New id, no parents Isolated non-canonical cWW with bulges (1)	7	2
132	IL_78994.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: New id, no parents	8	2
133	IL_28060.1 View exemplar Basepair signature: cWW-tHH-L-cWS-R-cWW History status: New id, no parents Major groove minor groove platform with tHH (1)	8	2
134	IL_81522.1 View exemplar Basepair signature: cWW-cSH-L-cWS-cWW History status: New id, no parents Major groove minor groove platform with intercalation; mini C-loop (2)	7	2
135	IL_96380.1 View exemplar Basepair signature: cWW-L-R-L-L-cWW History status: New id, no parents	8	2
136	IL_66123.1 View exemplar Basepair signature: cWW-R-R-cWW History status: New id, no parents	6	2
137	IL_37650.1 View exemplar Basepair signature: cWW-cWW-cSW-cWW History status: New id, no parents Multiple bulged bases with non-canonical cWW (1) Self complementary (1)	8	2
138	IL_01126.1 View exemplar Basepair signature: cWW-tSH-cWW History status: New id, no parents Minor groove platform (1) Multiple bulged bases (1)	5	2
139	IL_44060.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW History status: New id, no parents Kink-turn (1) Kink-turn from 23S H58 (1)	12	2
140	IL_79669.1 View exemplar Basepair signature: cWW-tSH-R-tHS-cWW History status: New id, no parents UAA/GAN variation (1)	9	2
141	IL_82426.1 View exemplar Basepair signature: cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW History status: New id, no parents	14	2
142	IL_10786.1 View exemplar Basepair signature: cWW-L-L-cWW History status: New id, no parents	6	2
143	IL_32705.1 View exemplar Basepair signature: cWW-R-tWH-cSW-L-R-R-L-tHS-cWW History status: New id, no parents	14	2
144	IL_61596.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-cWW History status: New id, no parents	10	2
145	IL_88269.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tWW-cWW History status: New id, no parents 6x5 Sarcin-Ricin; G-bulge (2)	11	2
146	IL_47265.1 View exemplar Basepair signature: cWW-tSS-cSS-tWW-L-tSH-R-R-cWW History status: New id, no parents	11	2
147	IL_01375.1 View exemplar Basepair signature: cWW-R-R-tWH-L-R-cWW History status: New id, no parents	10	2
148	IL_33409.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	2
149	IL_41882.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-cWW History status: New id, no parents	10	2
150	IL_51590.1 View exemplar Basepair signature: cWW-cSH-tWH-cSH-cWW-cWW History status: New id, no parents Other IL (1) C-loop with extra cWW pair (1)	9	2
151	IL_92440.1 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: New id, no parents tWH-tWH-tHW-tHW (2)	14	2
152	IL_45034.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: New id, no parents	10	2
153	IL_33662.1 View exemplar Basepair signature: cWW-L-tSS-cHW-L-L-L-L-L-cWW History status: New id, no parents	13	2
154	IL_42032.1 View exemplar Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW History status: New id, no parents	11	2
155	IL_05690.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-bif-cWW History status: New id, no parents	12	2
156	IL_25167.1 View exemplar Basepair signature: cWW-L-tWH-R-R-R-cWW History status: New id, no parents Major groove platform; stack outside cWW (1)	9	2
157	IL_09696.1 View exemplar Basepair signature: cWW-tSH-cWW History status: New id, no parents	5	1
158	IL_59724.1 View exemplar Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW History status: New id, no parents 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
159	IL_73523.1 View exemplar Basepair signature: cWW-cWW-L-cSW-L-tHS-cWW History status: New id, no parents	12	1
160	IL_89731.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R-cWW History status: New id, no parents	10	1
161	IL_11882.1 View exemplar Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW History status: New id, no parents	13	1
162	IL_34013.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
163	IL_42092.1 View exemplar Basepair signature: cWW-tSH-L-L-L-cWW History status: New id, no parents Isolated basepair with bulged bases (1)	9	1
164	IL_76919.1 View exemplar Basepair signature: cWW-R-R-R-tHS-cWW History status: New id, no parents	9	1
165	IL_93094.1 View exemplar Basepair signature: cWW-tSH-tHH-R-R-R-cWW History status: New id, no parents Reverse kink-turn (1)	11	1
166	IL_25738.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: New id, no parents	10	1
167	IL_17765.1 View exemplar Basepair signature: cWW-cSS-cWH-tSS-cWH-R-tWH-R-cWW History status: New id, no parents	14	1
168	IL_30113.1 View exemplar Basepair signature: cWW-tSS-L-cSS-R-L-L-L-L-cWW History status: New id, no parents	11	1
169	IL_60240.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents	6	1
170	IL_74184.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHS-cWW History status: New id, no parents	11	1
171	IL_84409.1 View exemplar Basepair signature: cWW-tSS-tHH-tWW-cSS-tWH-tSW-cWS-cHW-cSS-cSH-cWH-cHW-cSH-tWH-R-cWW History status: New id, no parents	23	1
172	IL_98711.1 View exemplar Basepair signature: cWW-tSH-tHW-tWW-cWW History status: New id, no parents tSH-tHW-tWW (1)	10	1
173	IL_02086.1 View exemplar Basepair signature: cWW-R-tHS-cWW History status: New id, no parents	7	1
174	IL_11914.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: New id, no parents	8	1
175	IL_22436.1 View exemplar Basepair signature: cWW-L-cSS-tWH-tHW-cWW-cWW History status: New id, no parents Kink-turn related (1)	11	1
176	IL_34223.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: New id, no parents Receptor of 11-nt loop-receptor motif (1)	8	1
177	IL_77253.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
178	IL_06267.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-L-L-cWW-cWW History status: New id, no parents	14	1
179	IL_45978.1 View exemplar Basepair signature: cWW-R-R-cWW-cWW-cWW History status: New id, no parents	10	1
180	IL_56501.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
181	IL_67834.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW History status: New id, no parents	24	1
182	IL_95553.1 View exemplar Basepair signature: cWW-tHS-tHS-cWW History status: New id, no parents	8	1
183	IL_30294.1 View exemplar Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW History status: New id, no parents Kink-turn (1)	15	1
184	IL_39409.1 View exemplar Basepair signature: cWW-R-R-tWH-tSH-tHS-cWW History status: New id, no parents	12	1
185	IL_74271.1 View exemplar Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW History status: New id, no parents	12	1
186	IL_90157.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWS-cWW History status: New id, no parents	12	1
187	IL_02130.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents Isolated near basepair (1)	6	1
188	IL_22745.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, no parents	5	1
189	IL_77332.1 View exemplar Basepair signature: cWW-L-L-cWW History status: New id, no parents	6	1
190	IL_93585.1 View exemplar Basepair signature: cWW-L-L-L-tWH-cSH-L-cWW-cWW History status: New id, no parents	11	1
191	IL_06276.1 View exemplar Basepair signature: cWW-cSH-L-L-L-cWW-cWW History status: New id, no parents	11	1
192	IL_15978.1 View exemplar Basepair signature: cWW-R-cSW-R-R-tHS-cWW History status: New id, no parents	11	1
193	IL_45988.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: New id, no parents	9	1
194	IL_95811.1 View exemplar Basepair signature: cWW-L-L-L-cWW-L-bif-cWW History status: New id, no parents Vitamin B12 Aptamer (1)	11	1
195	IL_60287.1 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: New id, no parents	8	1
196	IL_74719.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: New id, no parents Double sheared (1)	8	1
197	IL_85630.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW History status: New id, no parents	15	1
198	IL_90348.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: New id, no parents	7	1
199	IL_99902.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-cWW History status: New id, no parents	10	1
200	IL_13013.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-cSH-R-R-L-tHH-tHS-cWW History status: New id, no parents	21	1
201	IL_22821.1 View exemplar Basepair signature: cWW-tHW-L-R-R-R-L-L-L-L-L-L-L-cWW History status: New id, no parents Pseudoknot (1)	17	1
202	IL_34590.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
203	IL_54670.1 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: New id, no parents	12	1
204	IL_64944.1 View exemplar Basepair signature: cWW-cWW-cSH-tHW-L-cWW History status: New id, no parents	11	1
205	IL_06300.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: New id, no parents	9	1
206	IL_27833.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
207	IL_46112.1 View exemplar Basepair signature: cWW-L-L-L-L-L-cWW History status: New id, no parents	9	1
208	IL_68913.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-cSH-L-L-cWW History status: New id, no parents	14	1
209	IL_81382.1 View exemplar Basepair signature: cWW-L-cWH-R-R-cWW History status: New id, no parents	8	1
210	IL_95942.1 View exemplar Basepair signature: cWW-L-R-L-L-L-L-L-cWW History status: New id, no parents	11	1
211	IL_31504.1 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW History status: New id, no parents	18	1
212	IL_39507.1 View exemplar Basepair signature: cWW-L-R-L-L-L-cWW History status: New id, no parents	9	1
213	IL_85931.1 View exemplar Basepair signature: cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW History status: New id, no parents	13	1
214	IL_03420.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW History status: New id, no parents	13	1
215	IL_13131.1 View exemplar Basepair signature: cWW-R-R-cWW-cWW History status: New id, no parents	8	1
216	IL_65055.1 View exemplar Basepair signature: cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW History status: New id, no parents	23	1
217	IL_93952.1 View exemplar Basepair signature: cWW-cSS-L-L-tSH-tSS-tHS-L-cWW History status: New id, no parents Kink-turn (1)	11	1
218	IL_16160.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
219	IL_27888.1 View exemplar Basepair signature: cWW-R-bif-tHW-tHS-cWW History status: New id, no parents	10	1
220	IL_36582.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-tWH-tHS-cWW History status: New id, no parents 8x6 Sarcin-Ricin with inserted A; G-bulge (1)	14	1
221	IL_46401.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWW History status: New id, no parents	10	1
222	IL_69091.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW History status: New id, no parents	16	1
223	IL_96335.1 View exemplar Basepair signature: cWW-cSH-L-tSH-cWW-R-R-cWW History status: New id, no parents	11	1
224	IL_09820.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, no parents	6	1
225	IL_19022.1 View exemplar Basepair signature: cWW-tSH-R-tHH-tHS-cWW History status: New id, no parents	11	1
226	IL_31890.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cWW History status: New id, no parents	9	1
227	IL_13394.1 View exemplar Basepair signature: cWW-L-R-R-R-R-tSS-R-R-R-R-R-R-R-R-L-L-L-cWW History status: New id, no parents	22	1
228	IL_34780.1 View exemplar Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW History status: New id, no parents Kink-turn (1)	17	1
229	IL_43454.1 View exemplar Basepair signature: cWW-L-L-cWW History status: New id, no parents	6	1
230	IL_54896.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-tSS-cWW History status: New id, no parents	12	1
231	IL_65524.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: New id, no parents Quadruple sheared (1)	12	1
232	IL_94351.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHS-cWW History status: New id, no parents	11	1
233	IL_08061.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-L-cWW History status: New id, no parents	11	1
234	IL_46732.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: New id, no parents	8	1
235	IL_58390.1 View exemplar Basepair signature: cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW History status: New id, no parents	14	1
236	IL_69457.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW History status: New id, no parents	13	1
237	IL_09986.1 View exemplar Basepair signature: cWW-L-R-L-tHW-L-L-cWW History status: New id, no parents	11	1
238	IL_19048.1 View exemplar Basepair signature: cWW-bif-bif-L-L-cSW-cWW-cSH-R-cWW History status: New id, no parents	14	1
239	IL_39631.1 View exemplar Basepair signature: cWW-tHW-L-tHS-cWW History status: New id, no parents	9	1
240	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW-cWW History status: New id, no parents	10	1
241	IL_75392.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-L-L-tSS-R-R-R-cWW History status: New id, no parents	16	1
242	IL_90922.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-tSS-tSS-R-cWW History status: New id, no parents Kink-turn (1)	12	1
243	IL_04356.1 View exemplar Basepair signature: cWW-tWH-tWH-L-R-L-tWW-cWW History status: New id, no parents	13	1
244	IL_43743.1 View exemplar Basepair signature: cWW-cSS-cSS-R-cWW History status: New id, no parents 180 degree turn (1)	5	1
245	IL_55896.1 View exemplar Basepair signature: cWW-tSH-tHS-tWS-cWW History status: New id, no parents tSH-tHS-tWS (1)	10	1
246	IL_16702.1 View exemplar Basepair signature: cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW History status: New id, no parents	15	1
247	IL_28999.1 View exemplar Basepair signature: cWW-R-R-R-tSW-L-cWW History status: New id, no parents	10	1
248	IL_47072.1 View exemplar Basepair signature: cWW-R-R-cWW History status: New id, no parents	6	1
249	IL_70801.1 View exemplar Basepair signature: cWW-L-R-R-tWW-cWW-cWW-cWW History status: New id, no parents	13	1
250	IL_82194.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: New id, no parents	8	1
251	IL_96942.1 View exemplar Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW History status: New id, no parents	14	1
252	IL_20245.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-L-L-L-L-L-L-L-L-L-L-cWW-L-R-cWW History status: New id, no parents	25	1
253	IL_32181.1 View exemplar Basepair signature: cWW-cWW-cWW-L-cSW-L-R-R-R-cWW History status: New id, no parents	15	1
254	IL_51366.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW History status: New id, no parents	20	1
255	IL_61275.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: New id, no parents	8	1
256	IL_04736.1 View exemplar Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW History status: New id, no parents	12	1
257	IL_14312.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: New id, no parents	7	1
258	IL_23934.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: New id, no parents tSH-tHW (1)	9	1
259	IL_35058.1 View exemplar Basepair signature: cWW-tSW-L-cWS-tSW-R-R-cWW History status: New id, no parents Symmetric double minor groove platform (1)	9	1
260	IL_94466.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: New id, no parents	8	1
261	IL_16834.1 View exemplar Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW History status: New id, no parents	13	1
262	IL_97253.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-R-R-L-L-cWW History status: New id, no parents	14	1
263	IL_01335.1 View exemplar Basepair signature: cWW-cHW-L-L-L-L-L-L-L-L-cWW History status: New id, no parents	14	1
264	IL_20463.1 View exemplar Basepair signature: cWW-L-R-R-R-cWH-R-tHH-cSH-tWH-tHS-cWW History status: New id, no parents 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
265	IL_41414.1 View exemplar Basepair signature: cWW-cWW-R-R-cSH-R-bif-tWH-R-R-R-R-cWS-cWW History status: New id, no parents	21	1
266	IL_51528.1 View exemplar Basepair signature: cWW-L-L-tSS-L-R-R-R-cWW History status: New id, no parents Kink-turn (1)	11	1
267	IL_75840.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
268	IL_14754.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-cWW History status: New id, no parents	16	1
269	IL_44325.1 View exemplar Basepair signature: cWW-cWH-R-cWW History status: New id, no parents	6	1
270	IL_56034.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cWW History status: New id, no parents	10	1
271	IL_79734.1 View exemplar Basepair signature: cWW-R-R-R-R-cWW History status: New id, no parents	8	1
272	IL_59490.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: New id, no parents	8	1
273	IL_71973.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: New id, no parents	7	1
274	IL_82988.1 View exemplar Basepair signature: cWW-cWW-L-L-tHS-cWW History status: New id, no parents	10	1
275	IL_97256.1 View exemplar Basepair signature: cWW-tSH-L-R-R-L-L-L-cWW History status: New id, no parents	12	1
276	IL_20908.1 View exemplar Basepair signature: cWW-tSH-L-tHS-L-R-cWW History status: New id, no parents	10	1
277	IL_61852.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-tHS-tSS-tSS-R-cWW History status: New id, no parents Kink-turn (1)	14	1
278	IL_75899.1 View exemplar Basepair signature: cWW-cSH-cWW History status: New id, no parents	5	1
279	IL_88579.1 View exemplar Basepair signature: cWW-R-tSS-tWW-tWW-cWW History status: New id, no parents	11	1
280	IL_15787.1 View exemplar Basepair signature: cWW-tSH-tHW-L-bif-cWW History status: New id, no parents	11	1
281	IL_56105.1 View exemplar Basepair signature: cWW-tHS-cSH-tHS-cWW History status: New id, no parents	8	1
282	IL_80617.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
283	IL_95421.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-cWW History status: New id, no parents	14	1
284	IL_09155.1 View exemplar Basepair signature: cWW-cWH-L-L-cWW History status: New id, no parents	8	1
285	IL_29821.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: New id, no parents	10	1
286	IL_59645.1 View exemplar Basepair signature: cWW-cSH-L-L-L-cWW History status: New id, no parents	8	1
287	IL_72316.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cSS-tSS-cWW History status: New id, no parents	14	1
288	IL_01502.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW History status: New id, no parents	13	1
289	IL_11577.1 View exemplar Basepair signature: cWW-cWH-tWS-cWW History status: New id, no parents cWH basepair and non-canonical AC (1)	8	1
290	IL_21121.1 View exemplar Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW History status: New id, no parents	11	1
291	IL_51877.1 View exemplar Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW History status: New id, no parents	13	1
292	IL_63059.1 View exemplar Basepair signature: cWW-cSW-L-R-tHH-L-R-R-cSH-cWW History status: New id, no parents	14	1
293	IL_89055.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-L-L-L-L-cWW-cWW History status: New id, no parents	16	1
294	IL_92889.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW History status: New id, no parents	26	1
295	IL_15795.1 View exemplar Basepair signature: cWW-cSH-R-cWW History status: New id, no parents Minor groove platform (1)	6	1
296	IL_35410.1 View exemplar Basepair signature: cWW-cSH-tWH-cSH-cWS-cWW History status: New id, no parents C-loop (1)	7	1
297	IL_45257.1 View exemplar Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW History status: New id, no parents	14	1

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New id, no parents 297;

Internal Loop Motif Atlas Release 3.2 Download Csv Json

Internal Loop Motif Atlas Release 3.2

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