7NSP | Motifs

110 Hairpin loops
180 Internal loops
25 Junction loops

Valid loops

#	loop id	location	annotation (mapped to, source)	motif group (similar to)
1	HL_7NSP_001	1/8/12:24	NA	NA
2	HL_7NSP_002	1/8/32:40	NA	NA
3	HL_7NSP_003	1/8/49:54	NA	NA
4	HL_7NSP_004	1/8/64:72	NA	NA
5	HL_7NSP_005	1/A/59:68	NA	NA
6	HL_7NSP_006	1/A/87:95	NA	NA
7	HL_7NSP_007	1/A/123:128	NA	NA
8	HL_7NSP_008	1/A/137:142	NA	NA
9	HL_7NSP_009	1/A/158:168	NA	NA
10	HL_7NSP_010	1/A/194:201	NA	NA
11	HL_7NSP_011	1/A/225:230	NA	NA
12	HL_7NSP_012	1/A/246:252	NA	NA
13	HL_7NSP_013	1/A/305:312	NA	NA
14	HL_7NSP_014	1/A/319:323	NA	NA
15	HL_7NSP_015	1/A/327:335	NA	NA
16	HL_7NSP_016	1/A/382:392	NA	NA
17	HL_7NSP_017	1/A/410:417	NA	NA
18	HL_7NSP_018	1/A/462:467	NA	NA
19	HL_7NSP_019	1/A/487:493	NA	NA
20	HL_7NSP_021	1/A/566:575	NA	NA
21	HL_7NSP_022	1/A/611:617	NA	NA
22	HL_7NSP_023	1/A/629:634	NA	NA
23	HL_7NSP_024	1/A/641:647	NA	NA
24	HL_7NSP_025	1/A/712:719	NA	NA
25	HL_7NSP_026	1/A/744:753	NA	NA
26	HL_7NSP_027	1/A/779:785	NA	NA
27	HL_7NSP_028	1/A/826:831	NA	NA
28	HL_7NSP_030	1/A/955:962	NA	NA
29	HL_7NSP_031	1/A/978:985	NA	NA
30	HL_7NSP_032	1/A/1065:1073	NA	NA
31	HL_7NSP_033	1/A/1092:1099	NA	NA
32	HL_7NSP_035	1/A/1222:1227	NA	NA
33	HL_7NSP_036	1/A/1281:1289	NA	NA
34	HL_7NSP_037	1/A/1324:1330	NA	NA
35	HL_7NSP_038	1/A/1363:1368	NA	NA
36	HL_7NSP_039	1/A/1389:1398	NA	NA
37	HL_7NSP_040	1/A/1451:1459	NA	NA
38	HL_7NSP_041	1/A/1492:1498	NA	NA
39	HL_7NSP_042	1/A/1533:1538	NA	NA
40	HL_7NSP_043	1/A/1565:1568	NA	NA
41	HL_7NSP_044	1/A/1612:1619	NA	NA
42	HL_7NSP_045	1/A/1630:1636	NA	NA
43	HL_7NSP_046	1/A/1691:1696	NA	NA
44	HL_7NSP_047	1/A/1728:1731	NA	NA
45	HL_7NSP_048	1/A/1752:1756	NA	NA
46	HL_7NSP_049	1/A/1777:1787	NA	NA
47	HL_7NSP_050	1/A/1806:1811	NA	NA
48	HL_7NSP_051	1/A/1868:1873	NA	NA
49	HL_7NSP_053	1/A/1949:1957	NA	NA
50	HL_7NSP_054	1/A/2027:2036	NA	NA
51	HL_7NSP_055	1/A/2142:2149	NA	NA
52	HL_7NSP_056	1/A/2209:2215	NA	NA
53	HL_7NSP_057	1/A/2248:2256	NA	NA
54	HL_7NSP_058	1/A/2264:2276	NA	NA
55	HL_7NSP_059	1/A/2303:2313	NA	NA
56	HL_7NSP_060	1/A/2324:2331	NA	NA
57	HL_7NSP_061	1/A/2356:2361	NA	NA
58	HL_7NSP_062	1/A/2374:2379	NA	NA
59	HL_7NSP_063	1/A/2404:2413	NA	NA
60	HL_7NSP_064	1/A/2471:2479	NA	NA
61	HL_7NSP_065	1/A/2528:2535	NA	NA
62	HL_7NSP_066	1/A/2551:2557	NA	NA
63	HL_7NSP_067	1/A/2594:2599	NA	NA
64	HL_7NSP_068	1/A/2658:2663	NA	NA
65	HL_7NSP_069	1/A/2701:2706	NA	NA
66	HL_7NSP_070	1/A/2745:2759	NA	NA
67	HL_7NSP_071	1/A/2796:2799	NA	NA
68	HL_7NSP_072	1/A/2819:2827	NA	NA
69	HL_7NSP_073	1/A/2856:2861	NA	NA
70	HL_7NSP_074	1/B/38:44	homologous HL_5TBW_185	NA HL_02733.5*
71	HL_7NSP_075	1/B/86:90	geometric HL_5U30_001	NA HL_69353.7*
72	HL_7NSP_076	1/a/12:22	NA	NA
73	HL_7NSP_077	1/a/82:87	NA	NA
74	HL_7NSP_078	1/a/158:163	NA	NA
75	HL_7NSP_079	1/a/186:191	NA	NA
76	HL_7NSP_080	1/a/207:212	NA	NA
77	HL_7NSP_081	1/a/259:267	NA	NA
78	HL_7NSP_082	1/a/296:301	NA	NA
79	HL_7NSP_083	1/a/320:333	NA	NA
80	HL_7NSP_084	1/a/342:347	NA	NA
81	HL_7NSP_085	1/a/379:384	NA	NA
82	HL_7NSP_086	1/a/419:424	NA	NA
83	HL_7NSP_087	1/a/462:470	NA	NA
84	HL_7NSP_088	1/a/522:527	NA	NA
85	HL_7NSP_089	1/a/617:623	NA	NA
86	HL_7NSP_090	1/a/689:698	NA	NA
87	HL_7NSP_091	1/a/726:731	NA	NA
88	HL_7NSP_092	1/a/786:796	NA	NA
89	HL_7NSP_093	1/a/840:846	NA	NA
90	HL_7NSP_094	1/a/862:867	NA	NA
91	HL_7NSP_095	1/a/897:902	NA	NA
92	HL_7NSP_096	1/a/963:972	NA	NA
93	HL_7NSP_097	1/a/1012:1017	NA	NA
94	HL_7NSP_098	1/a/1028:1033	NA	NA
95	HL_7NSP_099	1/a/1076:1081	NA	NA
96	HL_7NSP_100	1/a/1089:1096	NA	NA
97	HL_7NSP_101	1/a/1134:1140	NA	NA
98	HL_7NSP_102	1/a/1165:1171	NA	NA
99	HL_7NSP_103	1/a/1265:1270	NA	NA
100	HL_7NSP_104	1/a/1314:1323	NA	NA
101	HL_7NSP_105	1/a/1356:1366	NA	NA
102	HL_7NSP_106	1/a/1449:1454	NA	NA
103	HL_7NSP_107	1/a/1515:1520	NA	NA
104	HL_7NSP_108	1/v/13:23	NA	NA
105	HL_7NSP_109	1/v/32:40	NA	NA
106	HL_7NSP_110	1/v/54:62	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_7NSP_020	missing nts	NA
2	HL_7NSP_029	missing nts	NA
3	HL_7NSP_034	missing nts	NA
4	HL_7NSP_052	missing nts	NA

Valid loops

#	loop id	location	annotation (mapped to, source)	motif group (similar to)
1	IL_7NSP_001	1/A/24:30, 1/A/510:516	NA	NA
2	IL_7NSP_002	1/A/36:37, 1/A/442:444	NA	NA
3	IL_7NSP_003	1/A/42:44, 1/A/434:437	NA	NA
4	IL_7NSP_004	1/A/81:85, 1/A/97:105	NA	NA
5	IL_7NSP_005	1/A/183:184, 1/A/212:214	NA	NA
6	IL_7NSP_006	1/A/188:194, 1/A/201:208	NA	NA
7	IL_7NSP_007	1/A/239:245, 1/A/253:258	NA	NA
8	IL_7NSP_008	1/A/269:271, 1/A/366:370	NA	NA
9	IL_7NSP_009	1/A/274:281, 1/A/359:363	NA	NA
10	IL_7NSP_010	1/A/293:295, 1/A/343:347	NA	NA
11	IL_7NSP_011	1/A/481:484, 1/A/496:509	NA	NA
12	IL_7NSP_012	1/A/536:539, 1/A/554:557	NA	NA
13	IL_7NSP_013	1/A/564:566, 1/A/575:577	NA	NA
14	IL_7NSP_014	1/A/606:610, 1/A/618:622	NA	NA
15	IL_7NSP_015	1/A/672:674, 1/A/806:808	NA	NA
16	IL_7NSP_016	1/A/674:678, 1/A/799:806	NA	NA
17	IL_7NSP_017	1/A/697:698, 1/A/763:765	NA	NA
18	IL_7NSP_018	1/A/702:703, 1/A/728:730	NA	NA
19	IL_7NSP_019	1/A/703:707, 1/A/724:728	NA	NA
20	IL_7NSP_020	1/A/738:740, 1/A/757:758	NA	NA
21	IL_7NSP_021	1/A/775:777, 1/A/787:791	NA	NA
22	IL_7NSP_022	1/A/837:838, 1/A/940:942	NA	NA
23	IL_7NSP_023	1/A/844:847, 1/A/933:934	NA	NA
24	IL_7NSP_024	1/A/847:848, 1/A/930:933	NA	NA
25	IL_7NSP_025	1/A/850:851, 1/A/926:928	NA	NA
26	IL_7NSP_026	1/A/856:862, 1/A/915:921	NA	NA
27	IL_7NSP_027	1/A/862:863, 1/A/913:915	NA	NA
28	IL_7NSP_028	1/A/864:868, 1/A/909:912	NA	NA
29	IL_7NSP_029	1/A/870:872, 1/A/905:907	NA	NA
30	IL_7NSP_032	1/A/994:996, 1/A/1159:1160	NA	NA
31	IL_7NSP_033	1/A/998:1002, 1/A/1153:1157	NA	NA
32	IL_7NSP_034	1/A/1004:1011, 1/A/1150:1151	NA	NA
33	IL_7NSP_035	1/A/1011:1013, 1/A/1149:1150	NA	NA
34	IL_7NSP_036	1/A/1018:1024, 1/A/1140:1144	NA	NA
35	IL_7NSP_037	1/A/1024:1030, 1/A/1124:1140	NA	NA
36	IL_7NSP_038	1/A/1031:1034, 1/A/1121:1123	NA	NA
37	IL_7NSP_039	1/A/1038:1041, 1/A/1114:1117	NA	NA
38	IL_7NSP_041	1/A/1059:1062, 1/A/1076:1079	NA	NA
39	IL_7NSP_042	1/A/1196:1198, 1/A/1247:1250	NA	NA
40	IL_7NSP_043	1/A/1202:1206, 1/A/1240:1243	NA	NA
41	IL_7NSP_044	1/A/1208:1215, 1/A/1234:1238	NA	NA
42	IL_7NSP_045	1/A/1262:1269, 1/A/2011:2017	NA	NA
43	IL_7NSP_046	1/A/1310:1313, 1/A/1603:1604	NA	NA
44	IL_7NSP_047	1/A/1319:1323, 1/A/1331:1333	NA	NA
45	IL_7NSP_048	1/A/1351:1355, 1/A/1376:1380	NA	NA
46	IL_7NSP_049	1/A/1357:1361, 1/A/1370:1374	NA	NA
47	IL_7NSP_050	1/A/1415:1416, 1/A/1582:1587	NA	NA
48	IL_7NSP_051	1/A/1417:1421, 1/A/1577:1581	NA	NA
49	IL_7NSP_052	1/A/1432:1435, 1/A/1557:1561	NA	NA
50	IL_7NSP_053	1/A/1437:1440, 1/A/1551:1555	NA	NA
51	IL_7NSP_054	1/A/1450:1451, 1/A/1459:1461	NA	NA
52	IL_7NSP_055	1/A/1468:1471, 1/A/1520:1524	NA	NA
53	IL_7NSP_056	1/A/1473:1478, 1/A/1513:1518	NA	NA
54	IL_7NSP_057	1/A/1481:1482, 1/A/1507:1510	NA	NA
55	IL_7NSP_058	1/A/1489:1491, 1/A/1499:1500	NA	NA
56	IL_7NSP_059	1/A/1526:1529, 1/A/1542:1546	NA	NA
57	IL_7NSP_060	1/A/1651:1656, 1/A/2004:2006	NA	NA
58	IL_7NSP_061	1/A/1663:1665, 1/A/1995:1997	NA	NA
59	IL_7NSP_062	1/A/1666:1669, 1/A/1993:1994	NA	NA
60	IL_7NSP_063	1/A/1669:1674, 1/A/1990:1993	NA	NA
61	IL_7NSP_064	1/A/1686:1691, 1/A/1696:1702	NA	NA
62	IL_7NSP_065	1/A/1712:1718, 1/A/1742:1746	NA	NA
63	IL_7NSP_066	1/A/1720:1724, 1/A/1736:1740	NA	NA
64	IL_7NSP_067	1/A/1727:1728, 1/A/1731:1733	NA	NA
65	IL_7NSP_068	1/A/1770:1771, 1/A/1980:1982	NA	NA
66	IL_7NSP_069	1/A/1798:1804, 1/A/1813:1821	NA	NA
67	IL_7NSP_070	1/A/1837:1840, 1/A/1902:1903	NA	NA
68	IL_7NSP_071	1/A/1841:1842, 1/A/1898:1901	NA	NA
69	IL_7NSP_073	1/A/1864:1867, 1/A/1874:1878	NA	NA
70	IL_7NSP_074	1/A/1933:1934, 1/A/1964:1967	NA	NA
71	IL_7NSP_075	1/A/1934:1945, 1/A/1961:1964	NA	NA
72	IL_7NSP_076	1/A/2050:2052, 1/A/2617:2618	NA	NA
73	IL_7NSP_077	1/A/2054:2056, 1/A/2612:2615	NA	NA
74	IL_7NSP_078	1/A/2067:2069, 1/A/2442:2443	NA	NA
75	IL_7NSP_079	1/A/2070:2071, 1/A/2438:2441	NA	NA
76	IL_7NSP_080	1/A/2081:2083, 1/A/2236:2239	NA	NA
77	IL_7NSP_081	1/A/2085:2087, 1/A/2232:2234	NA	NA
78	IL_7NSP_082	1/A/2098:2103, 1/A/2186:2191	NA	NA
79	IL_7NSP_083	1/A/2103:2105, 1/A/2184:2186	NA	NA
80	IL_7NSP_084	1/A/2108:2110, 1/A/2179:2181	NA	NA
81	IL_7NSP_086	1/A/2138:2141, 1/A/2150:2153	NA	NA
82	IL_7NSP_087	1/A/2202:2204, 1/A/2220:2221	NA	NA
83	IL_7NSP_088	1/A/2297:2299, 1/A/2317:2321	NA	NA
84	IL_7NSP_089	1/A/2350:2353, 1/A/2364:2367	NA	NA
85	IL_7NSP_090	1/A/2401:2403, 1/A/2414:2415	NA	NA
86	IL_7NSP_091	1/A/2453:2454, 1/A/2498:2500	NA	NA
87	IL_7NSP_092	1/A/2454:2455, 1/A/2496:2498	NA	NA
88	IL_7NSP_093	1/A/2457:2459, 1/A/2493:2494	NA	NA
89	IL_7NSP_094	1/A/2459:2461, 1/A/2489:2493	NA	NA
90	IL_7NSP_095	1/A/2466:2470, 1/A/2480:2484	NA	NA
91	IL_7NSP_096	1/A/2507:2508, 1/A/2580:2582	NA	NA
92	IL_7NSP_097	1/A/2510:2512, 1/A/2574:2578	NA	NA
93	IL_7NSP_098	1/A/2512:2513, 1/A/2571:2574	NA	NA
94	IL_7NSP_099	1/A/2522:2523, 1/A/2540:2543	NA	NA
95	IL_7NSP_100	1/A/2591:2592, 1/A/2601:2603	NA	NA
96	IL_7NSP_101	1/A/2636:2640, 1/A/2774:2782	NA	NA
97	IL_7NSP_102	1/A/2652:2658, 1/A/2663:2668	NA	NA
98	IL_7NSP_103	1/A/2680:2684, 1/A/2725:2727	NA	NA
99	IL_7NSP_104	1/A/2687:2691, 1/A/2718:2722	NA	NA
100	IL_7NSP_105	1/A/2695:2696, 1/A/2711:2714	NA	NA
101	IL_7NSP_106	1/A/2737:2742, 1/A/2762:2767	NA	NA
102	IL_7NSP_107	1/A/2795:2796, 1/A/2799:2801	NA	NA
103	IL_7NSP_108	1/A/2806:2811, 1/A/2889:2892	NA	NA
104	IL_7NSP_109	1/A/2838:2839, 1/A/2878:2880	NA	NA
105	IL_7NSP_110	1/A/2843:2846, 1/A/2870:2874	NA	NA
106	IL_7NSP_111	1/A/2847:2852, 1/A/2865:2869	NA	NA
107	IL_7NSP_112	1/B/17:18, 1/B/65:67	Major groove intercalation geometric IL_5J7L_355	NA IL_40508.4*
108	IL_7NSP_113	1/B/23:28, 1/B/56:60	geometric IL_5J7L_356	NA IL_18472.1*
109	IL_7NSP_114	1/B/30:31, 1/B/51:54	Major groove minor groove platform; mini C-loop geometric IL_5J7L_357	NA IL_09061.4*
110	IL_7NSP_115	1/B/34:38, 1/B/44:48	Symmetric double minor groove platform geometric IL_5NS3_002	NA IL_58103.5*
111	IL_7NSP_116	1/B/71:79, 1/B/97:105	Bacterial 5S Loop E geometric IL_5J7L_359	NA IL_56455.3*
112	IL_7NSP_117	1/a/30:32, 1/a/552:553	NA	NA
113	IL_7NSP_118	1/a/44:45, 1/a/396:398	NA	NA
114	IL_7NSP_119	1/a/47:52, 1/a/359:361	NA	NA
115	IL_7NSP_120	1/a/54:56, 1/a/356:357	NA	NA
116	IL_7NSP_121	1/a/63:66, 1/a/103:104	NA	NA
117	IL_7NSP_122	1/a/67:69, 1/a/99:102	NA	NA
118	IL_7NSP_123	1/a/70:73, 1/a/97:98	NA	NA
119	IL_7NSP_124	1/a/75:76, 1/a/93:95	NA	NA
120	IL_7NSP_125	1/a/128:131, 1/a/231:233	NA	NA
121	IL_7NSP_126	1/a/132:136, 1/a/227:230	NA	NA
122	IL_7NSP_127	1/a/144:146, 1/a/176:178	NA	NA
123	IL_7NSP_128	1/a/147:153, 1/a/168:175	NA	NA
124	IL_7NSP_129	1/a/203:207, 1/a/212:214	NA	NA
125	IL_7NSP_130	1/a/242:247, 1/a/277:284	NA	NA
126	IL_7NSP_131	1/a/249:252, 1/a/274:275	NA	NA
127	IL_7NSP_132	1/a/292:293, 1/a/304:308	NA	NA
128	IL_7NSP_133	1/a/367:369, 1/a/392:393	NA	NA
129	IL_7NSP_134	1/a/371:375, 1/a/389:390	NA	NA
130	IL_7NSP_135	1/a/375:376, 1/a/387:389	NA	NA
131	IL_7NSP_136	1/a/409:416, 1/a/427:433	NA	NA
132	IL_7NSP_137	1/a/440:442, 1/a/492:497	NA	NA
133	IL_7NSP_138	1/a/446:450, 1/a/483:488	NA	NA
134	IL_7NSP_139	1/a/450:455, 1/a/477:483	NA	NA
135	IL_7NSP_140	1/a/504:511, 1/a/540:541	NA	NA
136	IL_7NSP_141	1/a/515:521, 1/a/528:536	NA	NA
137	IL_7NSP_142	1/a/569:575, 1/a/880:881	NA	NA
138	IL_7NSP_143	1/a/580:584, 1/a/757:761	NA	NA
139	IL_7NSP_144	1/a/594:596, 1/a/644:645	NA	NA
140	IL_7NSP_145	1/a/597:598, 1/a/640:643	NA	NA
141	IL_7NSP_146	1/a/605:612, 1/a/628:633	NA	NA
142	IL_7NSP_147	1/a/654:655, 1/a/751:754	NA	NA
143	IL_7NSP_148	1/a/659:660, 1/a/745:747	NA	NA
144	IL_7NSP_149	1/a/662:666, 1/a/740:743	NA	NA
145	IL_7NSP_150	1/a/684:688, 1/a/699:706	NA	NA
146	IL_7NSP_151	1/a/774:778, 1/a/804:805	NA	NA
147	IL_7NSP_152	1/a/779:783, 1/a/799:803	NA	NA
148	IL_7NSP_153	1/a/887:894, 1/a/905:910	NA	NA
149	IL_7NSP_154	1/a/922:923, 1/a/1393:1395	NA	NA
150	IL_7NSP_155	1/a/925:927, 1/a/1390:1391	NA	NA
151	IL_7NSP_156	1/a/933:935, 1/a/1380:1384	NA	NA
152	IL_7NSP_157	1/a/953:954, 1/a/1226:1228	NA	NA
153	IL_7NSP_158	1/a/993:997, 1/a/1044:1045	NA	NA
154	IL_7NSP_159	1/a/998:999, 1/a/1041:1043	NA	NA
155	IL_7NSP_160	1/a/1048:1050, 1/a/1208:1209	NA	NA
156	IL_7NSP_161	1/a/1052:1056, 1/a/1204:1206	NA	NA
157	IL_7NSP_162	1/a/1057:1058, 1/a/1199:1203	NA	NA
158	IL_7NSP_163	1/a/1060:1061, 1/a/1195:1197	NA	NA
159	IL_7NSP_164	1/a/1061:1063, 1/a/1193:1195	NA	NA
160	IL_7NSP_165	1/a/1124:1128, 1/a/1144:1149	NA	NA
161	IL_7NSP_166	1/a/1129:1132, 1/a/1142:1143	NA	NA
162	IL_7NSP_167	1/a/1158:1161, 1/a/1175:1181	NA	NA
163	IL_7NSP_168	1/a/1247:1253, 1/a/1284:1290	NA	NA
164	IL_7NSP_169	1/a/1255:1258, 1/a/1277:1282	NA	NA
165	IL_7NSP_170	1/a/1259:1263, 1/a/1272:1276	NA	NA
166	IL_7NSP_171	1/a/1303:1308, 1/a/1329:1334	NA	NA
167	IL_7NSP_172	1/a/1399:1401, 1/a/1501:1504	NA	NA
168	IL_7NSP_173	1/a/1401:1404, 1/a/1497:1501	NA	NA
169	IL_7NSP_174	1/a/1405:1407, 1/a/1494:1496	NA	NA
170	IL_7NSP_175	1/a/1407:1409, 1/a/1491:1494	NA	NA
171	IL_7NSP_176	1/a/1412:1414, 1/a/1486:1488	NA	NA
172	IL_7NSP_177	1/a/1416:1419, 1/a/1481:1484	NA	NA
173	IL_7NSP_178	1/a/1430:1435, 1/a/1466:1470	NA	NA
174	IL_7NSP_179	1/a/1440:1442, 1/a/1460:1461	NA	NA
175	IL_7NSP_180	1/a/1445:1448, 1/a/1455:1457	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_7NSP_030	missing nts	NA
2	IL_7NSP_031	missing nts	NA
3	IL_7NSP_040	missing nts	NA
4	IL_7NSP_072	missing nts	NA
5	IL_7NSP_085	missing nts	NA

Valid loops

#	loop id	location	annotation (mapped to, source)	motif group (similar to)
1	J3_7NSP_001	1/A/30:31, 1/A/474:481, 1/A/509:510	NA	NA
2	J3_7NSP_002	1/A/56:57, 1/A/70:76, 1/A/110:114	NA	NA
3	J3_7NSP_003	1/A/683:689, 1/A/773:775, 1/A/791:794	NA	NA
4	J3_7NSP_004	1/A/698:700, 1/A/732:736, 1/A/760:763	NA	NA
5	J3_7NSP_005	1/A/1055:1057, 1/A/1081:1090, 1/A/1101:1104	NA	NA
6	J3_7NSP_006	1/A/1298:1303, 1/A/1625:1627, 1/A/1639:1642	NA	NA
7	J3_7NSP_007	1/A/1306:1309, 1/A/1605:1611, 1/A/1620:1622	NA	NA
8	J3_7NSP_008	1/A/1344:1349, 1/A/1382:1385, 1/A/1402:1403	NA	NA
9	J3_7NSP_009	1/A/2091:2093, 1/A/2196:2200, 1/A/2223:2228	NA	NA
10	J3_7NSP_010	1/A/2295:2297, 1/A/2321:2323, 1/A/2332:2337	NA	NA
11	J3_7NSP_011	1/A/2517:2520, 1/A/2545:2547, 1/A/2561:2567	NA	NA
12	J3_7NSP_012	1/A/2789:2791, 1/A/2805:2806, 1/A/2892:2894	NA	NA
13	J3_7NSP_013	1/A/2812:2815, 1/A/2831:2836, 1/A/2882:2888	NA	NA
14	J3_7NSP_014	1/B/10:16, 1/B/68:70, 1/B/106:110	NA	NA
15	J3_7NSP_015	1/a/46:47, 1/a/361:367, 1/a/393:395	NA	NA
16	J3_7NSP_016	1/a/586:588, 1/a/651:654, 1/a/754:755	NA	NA
17	J3_7NSP_017	1/a/826:829, 1/a/857:861, 1/a/868:874	NA	NA
18	J3_7NSP_018	1/a/943:946, 1/a/1235:1237, 1/a/1337:1340	NA	NA
19	J3_7NSP_019	1/a/955:962, 1/a/973:984, 1/a/1221:1225	NA	NA
20	J3_7NSP_020	1/a/990:993, 1/a/1045:1047, 1/a/1210:1215	NA	NA
21	J3_7NSP_021	1/a/1003:1007, 1/a/1022:1027, 1/a/1034:1037	NA	NA
22	J3_7NSP_022	1/a/1063:1068, 1/a/1107:1113, 1/a/1187:1193	NA	NA
23	J3_7NSP_023	1/a/1073:1074, 1/a/1083:1087, 1/a/1098:1102	NA	NA
24	J3_7NSP_024	1/a/1116:1118, 1/a/1155:1158, 1/a/1181:1184	NA	NA
25	J3_7NSP_025	1/a/1237:1241, 1/a/1296:1303, 1/a/1334:1337	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

7NSP Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops