8EIU | Motifs

Valid loops

#	loop id	location	annotation	motif
1	HL_8EIU_001 ➜	1/A/12:22	NA	NA
2	HL_8EIU_003 ➜	1/A/158:163	NA	NA
3	HL_8EIU_004 ➜	1/A/186:191	NA	NA
4	HL_8EIU_006 ➜	1/A/259:267	NA	NA
5	HL_8EIU_007 ➜	1/A/296:301	NA	NA
6	HL_8EIU_008 ➜	1/A/320:333	NA	NA
7	HL_8EIU_009 ➜	1/A/342:347	NA	NA
8	HL_8EIU_010 ➜	1/A/379:384	NA	NA
9	HL_8EIU_011 ➜	1/A/419:424	NA	NA
10	HL_8EIU_013 ➜	1/A/521:528	NA	NA
11	HL_8EIU_014 ➜	1/A/617:623	NA	NA
12	HL_8EIU_016 ➜	1/A/726:731	NA	NA
13	HL_8EIU_018 ➜	1/A/862:867	NA	NA
14	HL_8EIU_019 ➜	1/A/897:902	NA	NA
15	HL_8EIU_033 ➜	1/Y/31:39	NA	NA
16	HL_8EIU_034 ➜	1/Y/53:61	NA	NA
17	HL_8EIU_036 ➜	1/Z/31:39	NA	NA
18	HL_8EIU_037 ➜	1/Z/53:61	NA	NA
19	HL_8EIU_038 ➜	1/a/59:68	NA	NA
20	HL_8EIU_039 ➜	1/a/87:95	NA	NA
21	HL_8EIU_040 ➜	1/a/123:128	NA	NA
22	HL_8EIU_041 ➜	1/a/137:142	NA	NA
23	HL_8EIU_042 ➜	1/a/158:168	NA	NA
24	HL_8EIU_043 ➜	1/a/194:201	NA	NA
25	HL_8EIU_044 ➜	1/a/225:230	NA	NA
26	HL_8EIU_045 ➜	1/a/246:252	NA	NA
27	HL_8EIU_046 ➜	1/a/305:312	NA	NA
28	HL_8EIU_047 ➜	1/a/319:323	NA	NA
29	HL_8EIU_048 ➜	1/a/327:335	NA	NA
30	HL_8EIU_049 ➜	1/a/382:392	NA	NA
31	HL_8EIU_050 ➜	1/a/410:417	NA	NA
32	HL_8EIU_051 ➜	1/a/462:467	NA	NA
33	HL_8EIU_052 ➜	1/a/487:493	NA	NA
34	HL_8EIU_053 ➜	1/a/544:549	NA	NA
35	HL_8EIU_054 ➜	1/a/566:575	NA	NA
36	HL_8EIU_055 ➜	1/a/611:617	NA	NA
37	HL_8EIU_056 ➜	1/a/629:634	NA	NA
38	HL_8EIU_057 ➜	1/a/641:647	NA	NA
39	HL_8EIU_058 ➜	1/a/712:719	NA	NA
40	HL_8EIU_059 ➜	1/a/744:753	NA	NA
41	HL_8EIU_060 ➜	1/a/779:785	NA	NA
42	HL_8EIU_061 ➜	1/a/826:831	NA	NA
43	HL_8EIU_062 ➜	1/a/885:891	NA	NA
44	HL_8EIU_063 ➜	1/a/954:963	NA	NA
45	HL_8EIU_064 ➜	1/a/978:985	NA	NA
46	HL_8EIU_065 ➜	1/a/1222:1227	NA	NA
47	HL_8EIU_066 ➜	1/a/1281:1289	NA	NA
48	HL_8EIU_067 ➜	1/a/1324:1330	NA	NA
49	HL_8EIU_068 ➜	1/a/1363:1368	NA	NA
50	HL_8EIU_069 ➜	1/a/1389:1398	NA	NA
51	HL_8EIU_070 ➜	1/a/1451:1459	NA	NA
52	HL_8EIU_071 ➜	1/a/1492:1498	NA	NA
53	HL_8EIU_072 ➜	1/a/1533:1538	NA	NA
54	HL_8EIU_073 ➜	1/a/1565:1568	NA	NA
55	HL_8EIU_074 ➜	1/a/1612:1619	NA	NA
56	HL_8EIU_075 ➜	1/a/1630:1636	NA	NA
57	HL_8EIU_076 ➜	1/a/1691:1696	NA	NA
58	HL_8EIU_077 ➜	1/a/1728:1731	NA	NA
59	HL_8EIU_078 ➜	1/a/1752:1756	NA	NA
60	HL_8EIU_079 ➜	1/a/1777:1787	NA	NA
61	HL_8EIU_080 ➜	1/a/1806:1811	NA	NA
62	HL_8EIU_081 ➜	1/a/1868:1873	NA	NA
63	HL_8EIU_082 ➜	1/a/1910:1920	NA	NA
64	HL_8EIU_083 ➜	1/a/1949:1957	NA	NA
65	HL_8EIU_084 ➜	1/a/2027:2036	NA	NA
66	HL_8EIU_085 ➜	1/a/2209:2215	NA	NA
67	HL_8EIU_086 ➜	1/a/2248:2256	NA	NA
68	HL_8EIU_087 ➜	1/a/2264:2276	NA	NA
69	HL_8EIU_088 ➜	1/a/2303:2313	NA	NA
70	HL_8EIU_089 ➜	1/a/2324:2331	NA	NA
71	HL_8EIU_090 ➜	1/a/2356:2361	NA	NA
72	HL_8EIU_091 ➜	1/a/2374:2379	NA	NA
73	HL_8EIU_092 ➜	1/a/2404:2413	NA	NA
74	HL_8EIU_093 ➜	1/a/2471:2479	NA	NA
75	HL_8EIU_094 ➜	1/a/2528:2535	NA	NA
76	HL_8EIU_095 ➜	1/a/2551:2557	NA	NA
77	HL_8EIU_096 ➜	1/a/2594:2599	NA	NA
78	HL_8EIU_097 ➜	1/a/2658:2663	NA	NA
79	HL_8EIU_098 ➜	1/a/2701:2706	NA	NA
80	HL_8EIU_099 ➜	1/a/2745:2759	NA	NA
81	HL_8EIU_100 ➜	1/a/2795:2801	NA	NA
82	HL_8EIU_101 ➜	1/a/2819:2827	NA	NA
83	HL_8EIU_102 ➜	1/a/2856:2861	NA	NA
84	HL_8EIU_103 ➜	1/b/38:44	NA	NA
85	HL_8EIU_104 ➜	1/b/86:90	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_8EIU_002 ➜	missing nts	NA
2	HL_8EIU_005 ➜	missing nts	NA
3	HL_8EIU_012 ➜	missing nts	NA
4	HL_8EIU_015 ➜	missing nts	NA
5	HL_8EIU_017 ➜	missing nts	NA
6	HL_8EIU_020 ➜	missing nts	NA
7	HL_8EIU_021 ➜	missing nts	NA
8	HL_8EIU_022 ➜	missing nts	NA
9	HL_8EIU_023 ➜	missing nts	NA
10	HL_8EIU_024 ➜	missing nts	NA
11	HL_8EIU_025 ➜	missing nts	NA
12	HL_8EIU_026 ➜	missing nts	NA
13	HL_8EIU_027 ➜	missing nts	NA
14	HL_8EIU_028 ➜	missing nts	NA
15	HL_8EIU_029 ➜	missing nts	NA
16	HL_8EIU_030 ➜	missing nts	NA
17	HL_8EIU_031 ➜	missing nts	NA
18	HL_8EIU_032 ➜	missing nts	NA
19	HL_8EIU_035 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_8EIU_001 ➜	1/A/30:32,1/A/552:553	NA	NA
2	IL_8EIU_002 ➜	1/A/44:45,1/A/396:398	NA	NA
3	IL_8EIU_003 ➜	1/A/47:52,1/A/359:361	NA	NA
4	IL_8EIU_004 ➜	1/A/54:56,1/A/356:357	NA	NA
5	IL_8EIU_005 ➜	1/A/63:66,1/A/103:104	NA	NA
6	IL_8EIU_006 ➜	1/A/67:69,1/A/99:102	NA	NA
7	IL_8EIU_008 ➜	1/A/75:76,1/A/93:95	NA	NA
8	IL_8EIU_009 ➜	1/A/128:131,1/A/231:233	NA	NA
9	IL_8EIU_010 ➜	1/A/132:136,1/A/227:230	NA	NA
10	IL_8EIU_011 ➜	1/A/144:146,1/A/176:178	NA	NA
11	IL_8EIU_012 ➜	1/A/147:153,1/A/168:175	NA	NA
12	IL_8EIU_013 ➜	1/A/242:247,1/A/277:284	NA	NA
13	IL_8EIU_014 ➜	1/A/249:252,1/A/274:275	NA	NA
14	IL_8EIU_015 ➜	1/A/292:293,1/A/304:308	NA	NA
15	IL_8EIU_016 ➜	1/A/367:369,1/A/392:393	NA	NA
16	IL_8EIU_017 ➜	1/A/371:375,1/A/389:390	NA	NA
17	IL_8EIU_018 ➜	1/A/375:376,1/A/387:389	NA	NA
18	IL_8EIU_019 ➜	1/A/409:416,1/A/427:433	NA	NA
19	IL_8EIU_021 ➜	1/A/446:450,1/A/483:488	NA	NA
20	IL_8EIU_022 ➜	1/A/450:455,1/A/477:483	NA	NA
21	IL_8EIU_023 ➜	1/A/504:511,1/A/540:541	NA	NA
22	IL_8EIU_024 ➜	1/A/515:521,1/A/528:536	NA	NA
23	IL_8EIU_025 ➜	1/A/569:575,1/A/880:881	NA	NA
24	IL_8EIU_026 ➜	1/A/580:584,1/A/757:761	NA	NA
25	IL_8EIU_027 ➜	1/A/594:596,1/A/644:645	NA	NA
26	IL_8EIU_028 ➜	1/A/597:598,1/A/640:643	NA	NA
27	IL_8EIU_029 ➜	1/A/605:612,1/A/628:633	NA	NA
28	IL_8EIU_030 ➜	1/A/654:655,1/A/751:754	NA	NA
29	IL_8EIU_031 ➜	1/A/658:660,1/A/745:748	NA	NA
30	IL_8EIU_032 ➜	1/A/662:666,1/A/740:743	NA	NA
31	IL_8EIU_033 ➜	1/A/673:678,1/A/712:717	NA	NA
32	IL_8EIU_035 ➜	1/A/774:778,1/A/804:805	NA	NA
33	IL_8EIU_037 ➜	1/A/887:894,1/A/905:910	NA	NA
34	IL_8EIU_038 ➜	1/A/922:923,1/A/1393:1395	NA	NA
35	IL_8EIU_039 ➜	1/A/925:927,1/A/1390:1391	NA	NA
36	IL_8EIU_065 ➜	1/a/24:30,1/a/510:516	NA	NA
37	IL_8EIU_066 ➜	1/a/36:37,1/a/442:444	NA	NA
38	IL_8EIU_067 ➜	1/a/43:44,1/a/434:436	NA	NA
39	IL_8EIU_068 ➜	1/a/81:85,1/a/97:105	NA	NA
40	IL_8EIU_069 ➜	1/a/183:184,1/a/212:214	NA	NA
41	IL_8EIU_070 ➜	1/a/188:194,1/a/201:208	NA	NA
42	IL_8EIU_071 ➜	1/a/239:245,1/a/253:258	NA	NA
43	IL_8EIU_072 ➜	1/a/269:271,1/a/366:370	NA	NA
44	IL_8EIU_073 ➜	1/a/274:281,1/a/359:363	NA	NA
45	IL_8EIU_074 ➜	1/a/293:295,1/a/343:347	NA	NA
46	IL_8EIU_075 ➜	1/a/481:484,1/a/496:509	NA	NA
47	IL_8EIU_076 ➜	1/a/536:539,1/a/554:557	NA	NA
48	IL_8EIU_077 ➜	1/a/564:566,1/a/575:577	NA	NA
49	IL_8EIU_078 ➜	1/a/606:610,1/a/618:622	NA	NA
50	IL_8EIU_079 ➜	1/a/672:674,1/a/806:808	NA	NA
51	IL_8EIU_080 ➜	1/a/674:678,1/a/799:806	NA	NA
52	IL_8EIU_081 ➜	1/a/697:698,1/a/763:765	NA	NA
53	IL_8EIU_082 ➜	1/a/702:703,1/a/728:730	NA	NA
54	IL_8EIU_083 ➜	1/a/703:707,1/a/724:728	NA	NA
55	IL_8EIU_084 ➜	1/a/738:740,1/a/757:758	NA	NA
56	IL_8EIU_085 ➜	1/a/775:777,1/a/787:791	NA	NA
57	IL_8EIU_086 ➜	1/a/844:847,1/a/933:934	NA	NA
58	IL_8EIU_087 ➜	1/a/847:848,1/a/930:933	NA	NA
59	IL_8EIU_088 ➜	1/a/850:851,1/a/926:928	NA	NA
60	IL_8EIU_089 ➜	1/a/856:862,1/a/915:921	NA	NA
61	IL_8EIU_090 ➜	1/a/862:863,1/a/913:915	NA	NA
62	IL_8EIU_091 ➜	1/a/864:868,1/a/909:912	NA	NA
63	IL_8EIU_092 ➜	1/a/870:872,1/a/905:907	NA	NA
64	IL_8EIU_093 ➜	1/a/875:879,1/a/898:902	NA	NA
65	IL_8EIU_094 ➜	1/a/880:881,1/a/895:897	NA	NA
66	IL_8EIU_095 ➜	1/a/994:996,1/a/1159:1160	NA	NA
67	IL_8EIU_096 ➜	1/a/998:1002,1/a/1153:1157	NA	NA
68	IL_8EIU_097 ➜	1/a/1004:1011,1/a/1150:1151	NA	NA
69	IL_8EIU_098 ➜	1/a/1011:1013,1/a/1149:1150	NA	NA
70	IL_8EIU_099 ➜	1/a/1018:1024,1/a/1140:1144	NA	NA
71	IL_8EIU_100 ➜	1/a/1024:1030,1/a/1124:1140	NA	NA
72	IL_8EIU_101 ➜	1/a/1031:1034,1/a/1121:1123	NA	NA
73	IL_8EIU_102 ➜	1/a/1038:1041,1/a/1114:1117	NA	NA
74	IL_8EIU_103 ➜	1/a/1043:1051,1/a/1108:1112	NA	NA
75	IL_8EIU_104 ➜	1/a/1196:1198,1/a/1247:1250	NA	NA
76	IL_8EIU_105 ➜	1/a/1202:1206,1/a/1240:1243	NA	NA
77	IL_8EIU_106 ➜	1/a/1208:1215,1/a/1234:1238	NA	NA
78	IL_8EIU_107 ➜	1/a/1262:1269,1/a/2011:2017	NA	NA
79	IL_8EIU_108 ➜	1/a/1310:1313,1/a/1603:1604	NA	NA
80	IL_8EIU_109 ➜	1/a/1319:1323,1/a/1331:1333	NA	NA
81	IL_8EIU_110 ➜	1/a/1351:1355,1/a/1376:1380	NA	NA
82	IL_8EIU_111 ➜	1/a/1357:1361,1/a/1370:1374	NA	NA
83	IL_8EIU_112 ➜	1/a/1415:1416,1/a/1582:1587	NA	NA
84	IL_8EIU_113 ➜	1/a/1417:1421,1/a/1577:1581	NA	NA
85	IL_8EIU_114 ➜	1/a/1432:1435,1/a/1557:1561	NA	NA
86	IL_8EIU_115 ➜	1/a/1437:1440,1/a/1551:1555	NA	NA
87	IL_8EIU_116 ➜	1/a/1450:1451,1/a/1459:1461	NA	NA
88	IL_8EIU_117 ➜	1/a/1468:1471,1/a/1520:1524	NA	NA
89	IL_8EIU_118 ➜	1/a/1474:1478,1/a/1513:1517	NA	NA
90	IL_8EIU_119 ➜	1/a/1481:1482,1/a/1507:1510	NA	NA
91	IL_8EIU_120 ➜	1/a/1489:1491,1/a/1499:1500	NA	NA
92	IL_8EIU_121 ➜	1/a/1526:1529,1/a/1542:1546	NA	NA
93	IL_8EIU_122 ➜	1/a/1651:1656,1/a/2004:2006	NA	NA
94	IL_8EIU_123 ➜	1/a/1663:1665,1/a/1995:1997	NA	NA
95	IL_8EIU_124 ➜	1/a/1666:1669,1/a/1993:1994	NA	NA
96	IL_8EIU_125 ➜	1/a/1669:1674,1/a/1990:1993	NA	NA
97	IL_8EIU_126 ➜	1/a/1686:1691,1/a/1696:1702	NA	NA
98	IL_8EIU_127 ➜	1/a/1712:1718,1/a/1742:1746	NA	NA
99	IL_8EIU_128 ➜	1/a/1720:1725,1/a/1735:1740	NA	NA
100	IL_8EIU_129 ➜	1/a/1727:1728,1/a/1731:1733	NA	NA
101	IL_8EIU_130 ➜	1/a/1770:1771,1/a/1980:1982	NA	NA
102	IL_8EIU_131 ➜	1/a/1798:1804,1/a/1813:1821	NA	NA
103	IL_8EIU_132 ➜	1/a/1837:1840,1/a/1902:1903	NA	NA
104	IL_8EIU_133 ➜	1/a/1841:1842,1/a/1898:1901	NA	NA
105	IL_8EIU_134 ➜	1/a/1846:1849,1/a/1893:1894	NA	NA
106	IL_8EIU_135 ➜	1/a/1864:1867,1/a/1874:1878	NA	NA
107	IL_8EIU_136 ➜	1/a/1933:1934,1/a/1964:1967	NA	NA
108	IL_8EIU_137 ➜	1/a/1934:1945,1/a/1961:1964	NA	NA
109	IL_8EIU_138 ➜	1/a/2050:2052,1/a/2617:2618	NA	NA
110	IL_8EIU_139 ➜	1/a/2054:2056,1/a/2612:2615	NA	NA
111	IL_8EIU_140 ➜	1/a/2064:2066,1/a/2444:2446	NA	NA
112	IL_8EIU_141 ➜	1/a/2067:2070,1/a/2441:2443	NA	NA
113	IL_8EIU_142 ➜	1/a/2070:2071,1/a/2438:2441	NA	NA
114	IL_8EIU_143 ➜	1/a/2081:2083,1/a/2236:2239	NA	NA
115	IL_8EIU_144 ➜	1/a/2085:2087,1/a/2232:2234	NA	NA
116	IL_8EIU_145 ➜	1/a/2202:2204,1/a/2220:2221	NA	NA
117	IL_8EIU_146 ➜	1/a/2297:2299,1/a/2317:2321	NA	NA
118	IL_8EIU_147 ➜	1/a/2350:2353,1/a/2364:2367	NA	NA
119	IL_8EIU_148 ➜	1/a/2401:2403,1/a/2414:2415	NA	NA
120	IL_8EIU_149 ➜	1/a/2453:2455,1/a/2496:2500	NA	NA
121	IL_8EIU_150 ➜	1/a/2456:2459,1/a/2493:2495	NA	NA
122	IL_8EIU_151 ➜	1/a/2459:2461,1/a/2489:2493	NA	NA
123	IL_8EIU_152 ➜	1/a/2466:2470,1/a/2480:2484	NA	NA
124	IL_8EIU_153 ➜	1/a/2507:2509,1/a/2579:2582	NA	NA
125	IL_8EIU_154 ➜	1/a/2510:2512,1/a/2574:2578	NA	NA
126	IL_8EIU_155 ➜	1/a/2512:2513,1/a/2571:2574	NA	NA
127	IL_8EIU_156 ➜	1/a/2522:2523,1/a/2540:2543	NA	NA
128	IL_8EIU_157 ➜	1/a/2588:2591,1/a/2603:2606	NA	NA
129	IL_8EIU_158 ➜	1/a/2591:2592,1/a/2601:2603	NA	NA
130	IL_8EIU_159 ➜	1/a/2636:2640,1/a/2774:2782	NA	NA
131	IL_8EIU_160 ➜	1/a/2652:2658,1/a/2663:2668	NA	NA
132	IL_8EIU_161 ➜	1/a/2680:2684,1/a/2725:2727	NA	NA
133	IL_8EIU_162 ➜	1/a/2687:2691,1/a/2718:2722	NA	NA
134	IL_8EIU_163 ➜	1/a/2695:2696,1/a/2711:2714	NA	NA
135	IL_8EIU_164 ➜	1/a/2737:2742,1/a/2762:2767	NA	NA
136	IL_8EIU_165 ➜	1/a/2806:2811,1/a/2889:2892	NA	NA
137	IL_8EIU_166 ➜	1/a/2838:2839,1/a/2878:2880	NA	NA
138	IL_8EIU_167 ➜	1/a/2843:2846,1/a/2870:2874	NA	NA
139	IL_8EIU_168 ➜	1/a/2847:2852,1/a/2865:2869	NA	NA
140	IL_8EIU_169 ➜	1/b/17:18,1/b/65:67	NA	NA
141	IL_8EIU_170 ➜	1/b/23:28,1/b/56:60	NA	NA
142	IL_8EIU_171 ➜	1/b/30:31,1/b/51:54	NA	NA
143	IL_8EIU_172 ➜	1/b/34:38,1/b/44:48	NA	NA
144	IL_8EIU_173 ➜	1/b/71:79,1/b/97:105	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_8EIU_007 ➜	missing nts	NA
2	IL_8EIU_020 ➜	missing nts	NA
3	IL_8EIU_034 ➜	missing nts	NA
4	IL_8EIU_036 ➜	missing nts	NA
5	IL_8EIU_040 ➜	missing nts	NA
6	IL_8EIU_041 ➜	missing nts	NA
7	IL_8EIU_042 ➜	missing nts	NA
8	IL_8EIU_043 ➜	missing nts	NA
9	IL_8EIU_044 ➜	missing nts	NA
10	IL_8EIU_045 ➜	missing nts	NA
11	IL_8EIU_046 ➜	missing nts	NA
12	IL_8EIU_047 ➜	missing nts	NA
13	IL_8EIU_048 ➜	missing nts	NA
14	IL_8EIU_049 ➜	missing nts	NA
15	IL_8EIU_050 ➜	missing nts	NA
16	IL_8EIU_051 ➜	missing nts	NA
17	IL_8EIU_052 ➜	missing nts	NA
18	IL_8EIU_053 ➜	missing nts	NA
19	IL_8EIU_054 ➜	missing nts	NA
20	IL_8EIU_055 ➜	missing nts	NA
21	IL_8EIU_056 ➜	missing nts	NA
22	IL_8EIU_057 ➜	missing nts	NA
23	IL_8EIU_058 ➜	missing nts	NA
24	IL_8EIU_059 ➜	missing nts	NA
25	IL_8EIU_060 ➜	missing nts	NA
26	IL_8EIU_061 ➜	missing nts	NA
27	IL_8EIU_062 ➜	missing nts	NA
28	IL_8EIU_063 ➜	missing nts	NA
29	IL_8EIU_064 ➜	missing nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_8EIU_001 ➜	1/A/46:47,1/A/361:367,1/A/393:395	NA	NA
2	J3_8EIU_002 ➜	1/A/586:588,1/A/651:654,1/A/754:755	NA	NA
3	J3_8EIU_003 ➜	1/A/672:673,1/A/717:725,1/A/732:734	NA	NA
4	J3_8EIU_004 ➜	1/A/826:829,1/A/857:861,1/A/868:874	NA	NA
5	J3_8EIU_014 ➜	1/a/30:31,1/a/474:481,1/a/509:510	NA	NA
6	J3_8EIU_015 ➜	1/a/56:57,1/a/70:76,1/a/110:114	NA	NA
7	J3_8EIU_016 ➜	1/a/683:689,1/a/773:775,1/a/791:794	NA	NA
8	J3_8EIU_017 ➜	1/a/698:700,1/a/732:736,1/a/760:763	NA	NA
9	J3_8EIU_018 ➜	1/a/1298:1303,1/a/1625:1627,1/a/1639:1642	NA	NA
10	J3_8EIU_019 ➜	1/a/1306:1309,1/a/1605:1611,1/a/1620:1622	NA	NA
11	J3_8EIU_020 ➜	1/a/1344:1349,1/a/1382:1385,1/a/1402:1403	NA	NA
12	J3_8EIU_021 ➜	1/a/2091:2093,1/a/2196:2200,1/a/2223:2228	NA	NA
13	J3_8EIU_022 ➜	1/a/2295:2297,1/a/2321:2323,1/a/2332:2337	NA	NA
14	J3_8EIU_023 ➜	1/a/2517:2520,1/a/2545:2547,1/a/2561:2567	NA	NA
15	J3_8EIU_024 ➜	1/a/2789:2791,1/a/2805:2806,1/a/2892:2894	NA	NA
16	J3_8EIU_025 ➜	1/a/2812:2815,1/a/2831:2836,1/a/2882:2888	NA	NA
17	J3_8EIU_026 ➜	1/b/10:16,1/b/68:70,1/b/106:110	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	J3_8EIU_005 ➜	missing nts	NA
2	J3_8EIU_006 ➜	missing nts	NA
3	J3_8EIU_007 ➜	missing nts	NA
4	J3_8EIU_008 ➜	missing nts	NA
5	J3_8EIU_009 ➜	missing nts	NA
6	J3_8EIU_010 ➜	missing nts	NA
7	J3_8EIU_011 ➜	missing nts	NA
8	J3_8EIU_012 ➜	missing nts	NA
9	J3_8EIU_013 ➜	missing nts	NA

8EIU Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops