RNA 3D Hub //

6S12 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6S12_0011/A/59:68Pseudoknot with intercalation
homologous
HL_7A0S_001
HL_93438.2
HL_6S12_0021/A/85:97No text annotation
HL_6S12_0031/A/122:127No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_6S12_0041/A/136:143GNRA wlth tandem sheared
homologous
HL_4WF9_004
HL_81538.2
HL_6S12_0051/A/157:171No text annotation
HL_6S12_0061/A/197:204No text annotation
homologous
HL_7A0S_006
HL_30068.2
HL_6S12_0071/A/249:255No text annotation
homologous
HL_5J7L_141
HL_37369.2
HL_6S12_0081/A/283:288No text annotation
geometric
HL_2ZZM_002
HL_13963.3
HL_6S12_0091/A/348:355T-loop with 2 stacked bulged bases
homologous
HL_4WF9_010
HL_01609.3
HL_6S12_0101/A/362:366No text annotation
homologous
HL_7A0S_011
HL_75660.5
HL_6S12_0111/A/370:378T-loop with unstacked turn
homologous
HL_4WF9_012
HL_27670.2
HL_6S12_0121/A/426:440No text annotation
HL_6S12_0131/A/456:463Pseudoknot geometry
homologous
HL_7A0S_014
HL_30680.3
HL_6S12_0141/A/508:513GNRA
homologous
HL_7A0S_015
HL_37824.7
HL_6S12_0151/A/533:538GNRA
homologous
HL_7RQB_016
NA
HL_6S12_0161/A/587:594No text annotation
homologous
HL_4WF9_017
HL_50318.1
HL_6S12_0171/A/609:618T-loop with 2 stacked bulged bases
homologous
HL_4WF9_018
HL_28252.6
HL_6S12_0181/A/655:661No text annotation
geometric
HL_3IGI_004
HL_04783.2
HL_6S12_0191/A/674:679GNRA
homologous
HL_7RQB_020
NA
HL_6S12_0201/A/686:692No text annotation
homologous
HL_7RQB_021
NA
HL_6S12_0681/A/757:764No text annotation
HL_6S12_0211/A/758:762No text annotation
HL_6S12_0221/A/789:798No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_6S12_0231/A/824:830No text annotation
homologous
HL_7RQB_024
NA
HL_6S12_0241/A/871:876No text annotation
homologous
HL_7A0S_024
HL_55195.3
HL_6S12_0251/A/925:942No text annotation
geometric
HL_361D_002
HL_13963.3
HL_6S12_0261/A/999:1006GNRA
homologous
HL_4WF9_027
HL_37824.7
HL_6S12_0271/A/1022:1029No text annotation
homologous
HL_5J7L_160
HL_42998.2
HL_6S12_0281/A/1103:1123No text annotation
HL_6S12_0741/A/1213:1219No text annotation
HL_6S12_0301/A/1260:1265GNRA
homologous
HL_7A0S_031
HL_37824.7
HL_6S12_0311/A/1318:1326T-loop with 2 stacked bulged bases
homologous
HL_4WF9_032
HL_28252.6
HL_6S12_0321/A/1361:1367Pseudoknot geometry with 3' bulge
homologous
HL_7A0S_033
HL_57176.2
HL_6S12_0331/A/1400:1405GNRA
homologous
HL_4WF9_034
HL_37824.7
HL_6S12_0341/A/1426:1435No text annotation
homologous
HL_4WF9_035
HL_81545.2
HL_6S12_0351/A/1535:1541No text annotation
homologous
HL_7RQB_038
NA
HL_6S12_0361/A/1612:1615Mini UNCG
homologous
HL_7A0S_039
HL_48778.2
HL_6S12_0371/A/1656:1663No text annotation
homologous
HL_7RQB_040
NA
HL_6S12_0381/A/1673:1681GNRA with extra cWW
homologous
HL_4WF9_039
HL_20167.2
HL_6S12_0391/A/1735:1740UNCG
geometric
HL_6QN3_001
HL_34617.5
HL_6S12_0401/A/1760:1769No text annotation
HL_6S12_0411/A/1779:1783No text annotation
homologous
HL_7A0S_044
HL_80709.3
HL_6S12_0421/A/1803:1815No text annotation
homologous
HL_7A0S_045
HL_60266.1
HL_6S12_0431/A/1833:1838GNRA
homologous
HL_7RQB_046
NA
HL_6S12_0751/A/1891:1905No text annotation
HL_6S12_0451/A/1937:1947No text annotation
geometric
HL_4V88_198
NA
HL_6S12_0461/A/1976:1984No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_6S12_0471/A/2054:2063No text annotation
homologous
HL_4WF9_047
HL_61996.2
HL_6S12_0711/A/2156:2186No text annotation
HL_6S12_0481/A/2169:2176No text annotation
geometric
HL_8C3A_039
NA
HL_6S12_0491/A/2236:2242No text annotation
homologous
HL_5J7L_185
HL_49922.4
HL_6S12_0501/A/2275:2283No text annotation
homologous
HL_5J7L_186
HL_85367.2
HL_6S12_0511/A/2291:2303No text annotation
homologous
HL_4WF9_050
HL_91939.2
HL_6S12_0761/A/2331:2339No text annotation
HL_6S12_0531/A/2351:2358Pseudoknot geometry
homologous
HL_7RQB_056
NA
HL_6S12_0541/A/2382:2389GNRA with extra cWW
homologous
HL_4WF9_053
HL_04259.3
HL_6S12_0551/A/2401:2406GNRA
homologous
HL_5J7L_191
HL_37824.7
HL_6S12_0561/A/2431:2440No text annotation
homologous
HL_4WF9_055
HL_53454.2
HL_6S12_0571/A/2498:2506No text annotation
homologous
HL_9DFE_058
HL_32735.2
HL_6S12_0581/A/2555:2562No text annotation
homologous
HL_7RQB_061
NA
HL_6S12_0591/A/2578:2584No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_6S12_0601/A/2621:2626GNRA
homologous
HL_5J7L_196
HL_37824.7
HL_6S12_0611/A/2685:2690GNRA
homologous
HL_5J7L_197
HL_37824.7
HL_6S12_0621/A/2728:2733Ribsomal LSU H95
homologous
HL_7A0S_064
HL_65794.5
HL_6S12_0631/A/2772:2786No text annotation
HL_6S12_0721/A/2818:2826No text annotation
HL_6S12_0641/A/2839:2847No text annotation
homologous
HL_4WF9_064
HL_64690.6
HL_6S12_0651/A/2876:2881GNRA
homologous
HL_4WF9_065
HL_37824.7
HL_6S12_0731/B/32:46No text annotation
homologous
HL_9DFE_067
HL_97756.2
HL_6S12_0661/B/36:42No text annotation
geometric
HL_5TBW_006
NA
HL_6S12_0671/B/83:88No text annotation
geometric
HL_7RQB_011
NA

Problematic loops

#loop idProblemSequence
HL_6S12_029No text annotation
HL_6S12_069No text annotation
HL_6S12_044No text annotation
HL_6S12_070No text annotation
HL_6S12_052No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6S12_0011/A/24:30,
1/A/555:561		Triple sheared with non-canonical cWW
geometric
IL_4WF9_001
IL_04021.2
IL_6S12_0021/A/36:37,
1/A/488:490		Single bulged A
homologous
IL_7A0S_002
IL_31462.5
IL_6S12_0031/A/42:44,
1/A/480:483		Minor groove platform with extra cWW
homologous
IL_4WF9_003
IL_90351.1
IL_6S12_1101/A/81:85,
1/A/97:104		Kink-turn
homologous
IL_7A0S_004
IL_94910.1
IL_6S12_0051/A/152:153,
1/A/175:177		Major groove platform
geometric
IL_4LFB_024
IL_48076.6
IL_6S12_0061/A/186:187,
1/A/215:217		Single stack bend
homologous
IL_5J7L_249
IL_90729.1
IL_6S12_0071/A/190:197,
1/A/204:212		9x8 Sarcin-Ricin; G-bulge
geometric
IL_4WF9_008
IL_84694.2
IL_6S12_0081/A/241:248,
1/A/256:262		8x7 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_009
IL_04346.10
IL_6S12_0091/A/305:307,
1/A/408:412		No text annotation
IL_6S12_1111/A/307:335,
1/A/391:408		No text annotation
IL_6S12_1121/A/335:338,
1/A/386:391		No text annotation
IL_6S12_0101/A/336:338,
1/A/386:390		No text annotation
IL_6S12_0111/A/527:530,
1/A/541:554		No text annotation
geometric
IL_4WF9_015
IL_81516.2
IL_6S12_0121/A/581:584,
1/A/597:600		Double sheared
homologous
IL_5J7L_256
IL_09705.15
IL_6S12_0131/A/607:609,
1/A/618:620		Isolated non-canonical cWW pair
geometric
IL_4WF9_017
IL_07785.1
IL_6S12_0141/A/638:640,
1/A/705:707		Isolated non-canonical cWW pair
homologous
IL_4WF9_018
IL_07785.1
IL_6S12_0151/A/649:653,
1/A/663:667		AAA cross-strand stack
homologous
IL_4WF9_019
IL_66798.2
IL_6S12_0161/A/717:719,
1/A/851:853		No text annotation
geometric
IL_7RQB_017
NA
IL_6S12_0171/A/719:723,
1/A/844:851		tHW-tHW cross-strand stack
homologous
IL_7A0S_015
IL_54041.2
IL_6S12_0181/A/742:743,
1/A/808:810		Single bulged A
geometric
IL_4V9F_025
IL_31462.5
IL_6S12_0191/A/747:748,
1/A/773:775		Single bulged G
geometric
IL_7A0S_017
IL_00225.13
IL_6S12_1311/A/748:752,
1/A/769:773		No text annotation
homologous
IL_9DFE_019
IL_50730.2
IL_6S12_0211/A/757:758,
1/A/762:764		No text annotation
IL_6S12_0221/A/783:785,
1/A/802:803		Major groove platform
homologous
IL_4WF9_026
IL_48076.6
IL_6S12_0231/A/820:822,
1/A/832:836		Multiple bulged bases
homologous
IL_7RQB_023
NA
IL_6S12_0241/A/881:883,
1/A/984:987		Other IL
geometric
IL_5TBW_064
NA
IL_6S12_0251/A/889:893,
1/A/975:978		No text annotation
homologous
IL_4WF9_029
IL_06300.1
IL_6S12_0261/A/897:898,
1/A/969:971		No text annotation
IL_6S12_0271/A/901:907,
1/A/960:966		7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_4WF9_031
IL_29198.2
IL_6S12_0281/A/907:908,
1/A/958:960		Minor groove platform
homologous
IL_7RQB_028
NA
IL_6S12_0291/A/909:913,
1/A/954:957		C-loop
homologous
IL_4WF9_033
IL_26222.2
IL_6S12_0301/A/920:924,
1/A/943:947		No text annotation
geometric
IL_5TBW_121
NA
IL_6S12_0311/A/1038:1040,
1/A/1203:1204		Single bulged C
homologous
IL_5J7L_276
IL_61258.15
IL_6S12_0321/A/1042:1046,
1/A/1197:1201		UAA/GAN
homologous
IL_7A0S_033
IL_38507.2
IL_6S12_0331/A/1048:1055,
1/A/1194:1195		SSU/LSU pseudoknot
homologous
IL_5J7L_278
IL_41203.4
IL_6S12_0341/A/1055:1057,
1/A/1193:1194		Single bulged U
geometric
IL_7RQB_038
NA
IL_6S12_0351/A/1062:1068,
1/A/1184:1188		Kink-turn related
geometric
IL_4WF9_039
IL_57188.5
IL_6S12_0361/A/1068:1074,
1/A/1168:1184		No text annotation
geometric
IL_4WF9_040
IL_50715.3
IL_6S12_0371/A/1074:1078,
1/A/1165:1168		No text annotation
IL_6S12_1321/A/1079:1083,
1/A/1160:1164		No text annotation
IL_6S12_0391/A/1087:1095,
1/A/1152:1156		Kink-turn
homologous
IL_5J7L_284
IL_99692.2
IL_6S12_0401/A/1095:1098,
1/A/1149:1152		No text annotation
IL_6S12_0411/A/1098:1100,
1/A/1148:1149		No text annotation
IL_6S12_1151/A/1098:1103,
1/A/1123:1149		No text annotation
IL_6S12_0421/A/1100:1103,
1/A/1123:1148		No text annotation
IL_6S12_0431/A/1235:1237,
1/A/1285:1288		Isolated cWS basepair
homologous
IL_4WF9_044
IL_42997.3
IL_6S12_0441/A/1243:1245,
1/A/1277:1279		Isolated cWH basepair
homologous
IL_4WF9_045
IL_10167.5
IL_6S12_0451/A/1246:1253,
1/A/1272:1276		Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_6S12_0461/A/1257:1259,
1/A/1266:1268		Intercalated cWW
homologous
IL_4WF9_047
IL_31737.3
IL_6S12_0471/A/1300:1307,
1/A/2038:2044		8x7 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_048
IL_04346.10
IL_6S12_0481/A/1356:1360,
1/A/1368:1370		C-loop
homologous
IL_5J7L_291
IL_63596.11
IL_6S12_1331/A/1388:1390,
1/A/1416:1417		Single stack bend
geometric
IL_7A0S_005
IL_90729.1
IL_6S12_0491/A/1388:1392,
1/A/1413:1417		UAA/GAN
homologous
IL_7A0S_048
IL_89021.2
IL_6S12_1341/A/1390:1392,
1/A/1413:1416		No text annotation
IL_6S12_0501/A/1394:1398,
1/A/1407:1411		tSH-tHW-tHS
homologous
IL_4WF9_052
IL_17136.7
IL_6S12_1161/A/1447:1465,
1/A/1624:1636		No text annotation
IL_6S12_0511/A/1477:1480,
1/A/1604:1607		No text annotation
IL_6S12_1171/A/1477:1511,
1/A/1570:1607		No text annotation
IL_6S12_0521/A/1481:1511,
1/A/1570:1603		No text annotation
IL_6S12_0531/A/1511:1517,
1/A/1563:1570		No text annotation
IL_6S12_0541/A/1518:1523,
1/A/1557:1562		No text annotation
IL_6S12_0551/A/1524:1526,
1/A/1549:1556		No text annotation
IL_6S12_0561/A/1532:1534,
1/A/1542:1543		No text annotation
IL_6S12_0571/A/1695:1700,
1/A/2031:2033		No text annotation
homologous
IL_5J7L_304
IL_12566.4
IL_6S12_1351/A/1707:1709,
1/A/2022:2024		Isolated tWW turn
homologous
IL_4WF9_063
IL_67095.2
IL_6S12_0591/A/1710:1713,
1/A/2020:2021		Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_6S12_1201/A/1710:1718,
1/A/2017:2021		No text annotation
homologous
IL_5J7L_386
IL_22854.4
IL_6S12_0601/A/1713:1718,
1/A/2017:2020		Intercalated tWH
homologous
IL_5J7L_307
IL_76758.2
IL_6S12_0611/A/1730:1735,
1/A/1740:1746		tSH-tSH-tHH-tHS
homologous
IL_5J7L_308
IL_47346.2
IL_6S12_0621/A/1755:1759,
1/A/1770:1774		No text annotation
IL_6S12_0631/A/1797:1798,
1/A/2007:2009		Single bulged A
homologous
IL_7A0S_064
IL_31462.5
IL_6S12_0641/A/1825:1831,
1/A/1840:1848		Kink-turn related
homologous
IL_7RQB_070
NA
IL_6S12_0651/A/1864:1867,
1/A/1929:1930		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_6S12_1211/A/1868:1869,
1/A/1925:1928		Major groove intercalation
homologous
IL_4WF9_071
IL_82107.4
IL_6S12_0671/A/1873:1876,
1/A/1920:1921		Single stack bend
geometric
IL_4V9F_005
IL_90729.1
IL_6S12_1361/A/1878:1882,
1/A/1914:1918		UAA/GAN with extra pair
homologous
IL_7A0S_069
IL_89021.2
IL_6S12_0691/A/1883:1887,
1/A/1909:1913		Triple sheared
homologous
IL_4WF9_074
IL_66798.2
IL_6S12_1371/A/1883:1889,
1/A/1907:1913		No text annotation
IL_6S12_0701/A/1961:1972,
1/A/1988:1991		No text annotation
homologous
IL_4WF9_077
IL_42218.2
IL_6S12_0711/A/2077:2079,
1/A/2644:2645		Major groove platform
homologous
IL_4WF9_078
IL_48076.6
IL_6S12_0721/A/2081:2083,
1/A/2639:2642		No text annotation
homologous
IL_4WF9_079
IL_83389.2
IL_6S12_0731/A/2094:2096,
1/A/2469:2470		Single bulged U
homologous
IL_7RQB_080
NA
IL_6S12_0741/A/2097:2098,
1/A/2465:2468		Minor groove platform
homologous
IL_7RQB_081
NA
IL_6S12_0751/A/2108:2110,
1/A/2263:2266		Isolated tHS basepair with bulges
homologous
IL_5J7L_325
IL_85599.2
IL_6S12_1231/A/2123:2125,
1/A/2218:2220		Isolated non-canonical cWW pair
geometric
IL_8C3A_124
NA
IL_6S12_0781/A/2151:2154,
1/A/2188:2201		No text annotation
IL_6S12_0791/A/2156:2169,
1/A/2176:2186		No text annotation
IL_6S12_0801/A/2229:2231,
1/A/2247:2248		Single bulged G
geometric
IL_3NDB_004
IL_00225.13
IL_6S12_0811/A/2324:2326,
1/A/2344:2348		Isolated tHS basepair with bulges
geometric
IL_5TBW_095
NA
IL_6S12_0821/A/2377:2380,
1/A/2391:2394		Double sheared
homologous
IL_5J7L_333
IL_09705.15
IL_6S12_0831/A/2428:2430,
1/A/2441:2442		Single bulged U
homologous
IL_5J7L_334
IL_89505.4
IL_6S12_0841/A/2480:2481,
1/A/2525:2527		Single stack bend
geometric
IL_7RQB_091
NA
IL_6S12_0851/A/2481:2482,
1/A/2523:2525		Major groove platform
homologous
IL_4WF9_090
IL_48076.6
IL_6S12_0861/A/2484:2486,
1/A/2520:2521		Major groove platform
geometric
IL_4WF9_091
IL_48076.6
IL_6S12_1261/A/2484:2488,
1/A/2516:2521		No text annotation
IL_6S12_0871/A/2486:2488,
1/A/2516:2520		Major groove minor groove platform with extra cWW
homologous
IL_7RQB_094
NA
IL_6S12_0881/A/2493:2497,
1/A/2507:2511		Triple sheared
homologous
IL_4WF9_093
IL_17948.2
IL_6S12_1271/A/2534:2535,
1/A/2607:2609		No text annotation
homologous
IL_9DFE_096
IL_07039.3
IL_6S12_0901/A/2537:2539,
1/A/2601:2605		Isolated non-canonical cWW with bulges
homologous
IL_4WF9_095
IL_07785.1
IL_6S12_0911/A/2539:2540,
1/A/2598:2601		No text annotation
geometric
IL_5J7L_341
IL_42626.2
IL_6S12_0921/A/2549:2550,
1/A/2567:2570		Major groove platform with intercalation
homologous
IL_7RQB_099
NA
IL_6S12_0931/A/2618:2619,
1/A/2628:2630		Major groove platform
geometric
IL_1G1X_002
IL_48076.6
IL_6S12_0941/A/2663:2667,
1/A/2801:2809		tSH-tHS-tHW
homologous
IL_4WF9_099
IL_04638.3
IL_6S12_0951/A/2670:2672,
1/A/2797:2798		Single stack bend
geometric
IL_7A0S_054
IL_26793.1
IL_6S12_1281/A/2679:2685,
1/A/2690:2695		No text annotation
homologous
IL_9DFE_102
IL_16458.4
IL_6S12_0971/A/2707:2711,
1/A/2752:2754		C-loop
homologous
IL_4WF9_101
IL_63596.11
IL_6S12_0981/A/2714:2718,
1/A/2745:2749		No text annotation
homologous
IL_5J7L_348
IL_23774.1
IL_6S12_0991/A/2722:2723,
1/A/2738:2741		Multiple bulged bases
homologous
IL_5J7L_349
IL_42626.2
IL_6S12_1001/A/2764:2769,
1/A/2789:2794		UAA/GAN with extra cWW
homologous
IL_7A0S_098
IL_49767.8
IL_6S12_1011/A/2816:2831,
1/A/2909:2913		No text annotation
IL_6S12_1021/A/2858:2859,
1/A/2898:2900		Single bulged C
homologous
IL_7RQB_108
NA
IL_6S12_1291/A/2863:2865,
1/A/2891:2894		No text annotation
homologous
IL_4WF9_107
IL_31531.3
IL_6S12_1041/A/2867:2872,
1/A/2885:2889		tHS double platform
homologous
IL_4WF9_108
IL_70411.2
IL_6S12_1051/B/3:5,
1/B/111:112		No text annotation
IL_6S12_1061/B/5:8,
1/B/107:111		No text annotation
IL_6S12_1071/B/15:16,
1/B/63:65		Major groove intercalation
homologous
IL_4V9F_101
IL_31462.5
IL_6S12_1081/B/21:29,
1/B/49:58		No text annotation
IL_6S12_1091/B/32:36,
1/B/42:46		Symmetric double minor groove platform
geometric
IL_5NS3_002
IL_58103.11
IL_6S12_1301/B/69:80,
1/B/91:102		No text annotation

Problematic loops

#loop idProblemSequence
IL_6S12_004No text annotation
IL_6S12_020Triple sheared with non-canonical cWW
IL_6S12_113Isolated cWS basepair
IL_6S12_038No text annotation
IL_6S12_114No text annotation
IL_6S12_118No text annotation
IL_6S12_119Isolated cWS basepair
IL_6S12_058No text annotation
IL_6S12_066Isolated non-canonical cWW with bulges
IL_6S12_068No text annotation
IL_6S12_122No text annotation
IL_6S12_076Tandem non-canonical cWW pairs
IL_6S12_124No text annotation
IL_6S12_077No text annotation
IL_6S12_125No text annotation
IL_6S12_089Major groove platform with extra pair
IL_6S12_096No text annotation
IL_6S12_103Multiple bulged bases with non-canonical cWW

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6S12_0011/A/30:31,
1/A/520:527,
1/A/554:555		No text annotation
geometric
J3_4V9F_011
J3_60031.2
J3_6S12_0131/A/30:31,
1/A/520:530,
1/A/541:555		No text annotation
homologous
J3_4WF9_011
J3_92134.2
J3_6S12_0141/A/32:35,
1/A/491:507,
1/A/514:519		No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_6S12_0021/A/56:57,
1/A/70:76,
1/A/109:113		No text annotation
homologous
J3_7A0S_002
J3_35667.2
J3_6S12_0031/A/272:276,
1/A/295:302,
1/A/415:416		No text annotation
homologous
J3_7RQB_003
NA
J3_6S12_0151/A/339:344,
1/A/359:368,
1/A/380:385		No text annotation
geometric
J3_4V9F_015
J3_59706.1
J3_6S12_0221/A/340:344,
1/A/359:368,
1/A/380:384		No text annotation
homologous
J3_4WF9_015
J3_46299.2
J3_6S12_0041/A/728:734,
1/A/818:820,
1/A/836:839		No text annotation
homologous
J3_5J7L_038
J3_64189.2
J3_6S12_0051/A/743:745,
1/A/777:781,
1/A/805:808		No text annotation
homologous
J3_7RQB_005
NA
J3_6S12_0061/A/1335:1340,
1/A/1669:1671,
1/A/1683:1686		No text annotation
homologous
J3_4WF9_004
J3_32852.6
J3_6S12_0071/A/1342:1346,
1/A/1649:1655,
1/A/1664:1667		No text annotation
homologous
J3_4WF9_005
J3_68164.1
J3_6S12_0231/A/1381:1387,
1/A/1418:1422,
1/A/1439:1440		No text annotation
homologous
J3_7A0S_018
J3_31965.2
J3_6S12_0181/A/1468:1473,
1/A/1611:1612,
1/A/1615:1621		No text annotation
homologous
J3_7A0S_019
J3_34864.2
J3_6S12_0081/A/2118:2120,
1/A/2223:2229,
1/A/2248:2255		No text annotation
J3_6S12_0191/A/2309:2312,
1/A/2410:2422,
1/A/2448:2454		No text annotation
homologous
J3_4WF9_019
J3_39320.1
J3_6S12_0091/A/2322:2324,
1/A/2348:2350,
1/A/2359:2364		No text annotation
geometric
J3_4V9F_008
J3_61124.2
J3_6S12_0201/A/2322:2326,
1/A/2344:2350,
1/A/2359:2364		No text annotation
homologous
J3_5J7L_071
J3_44961.1
J3_6S12_0101/A/2544:2547,
1/A/2572:2574,
1/A/2588:2594		No text annotation
homologous
J3_4WF9_009
J3_32601.5
J3_6S12_0211/A/2816:2818,
1/A/2826:2831,
1/A/2909:2913		No text annotation
J3_6S12_0111/A/2834:2835,
1/A/2851:2856,
1/A/2902:2906		No text annotation
homologous
J3_4WF9_021
J3_76911.2
J3_6S12_0121/B/9:14,
1/B/66:68,
1/B/103:106		No text annotation
J4_6S12_0011/A/271:272,
1/A/416:421,
1/A/445:452,
1/A/467:470		No text annotation
homologous
J4_5J7L_018
J4_45801.6
J4_6S12_0101/A/340:344,
1/A/359:362,
1/A/366:368,
1/A/380:384		No text annotation
homologous
J4_9DFE_002
J4_71729.5
J4_6S12_0031/A/644:647,
1/A/669:673,
1/A/680:683,
1/A/695:701		No text annotation
homologous
J4_5J7L_020
J4_60168.1
J4_6S12_0041/A/1308:1313,
1/A/1331:1332,
1/A/1689:1693,
1/A/2035:2037		No text annotation
J4_6S12_0051/A/1347:1351,
1/A/1375:1380,
1/A/1441:1442,
1/A/1641:1648		No text annotation
J4_6S12_0061/A/1799:1803,
1/A/1815:1819,
1/A/1854:1857,
1/A/2002:2006		No text annotation
homologous
J4_4WF9_007
J4_61477.5
J4_6S12_0071/A/1860:1863,
1/A/1931:1933,
1/A/1951:1961,
1/A/1991:1999		No text annotation
J4_6S12_0081/A/2312:2317,
1/A/2369:2374,
1/A/2397:2399,
1/A/2408:2410		No text annotation
J4_6S12_0091/A/2672:2673,
1/A/2701:2703,
1/A/2758:2762,
1/A/2796:2797		No text annotation
J5_6S12_0011/A/45:47,
1/A/180:186,
1/A/217:238,
1/A/265:269,
1/A/472:479		No text annotation
J5_6S12_0021/A/47:54,
1/A/115:120,
1/A/129:130,
1/A/149:151,
1/A/178:180		No text annotation
homologous
J5_9DFE_001
J5_01737.2
J5_6S12_0031/A/627:632,
1/A/713:716,
1/A/854:857,
1/A/1234:1235,
1/A/1288:1294		No text annotation
homologous
J5_4WF9_004
J5_74302.5
J5_6S12_0041/A/1718:1726,
1/A/1750:1751,
1/A/1778:1779,
1/A/1783:1791,
1/A/2015:2017		No text annotation
homologous
J5_4WF9_005
J5_62523.6
J5_6S12_0051/A/2084:2091,
1/A/2473:2480,
1/A/2527:2534,
1/A/2609:2615,
1/A/2633:2638		No text annotation
J5_6S12_0061/A/2101:2104,
1/A/2270:2273,
1/A/2285:2286,
1/A/2308:2309,
1/A/2454:2462		No text annotation
homologous
J5_7A0S_007
J5_39529.1
J6_6S12_0011/A/2101:2104,
1/A/2270:2273,
1/A/2285:2286,
1/A/2308:2312,
1/A/2410:2422,
1/A/2448:2462		No text annotation
J7_6S12_0011/A/862:867,
1/A/880:881,
1/A/987:990,
1/A/1015:1020,
1/A/1031:1035,
1/A/1207:1209,
1/A/1223:1229		No text annotation
J10_6S12_0011/A/8:15,
1/A/570:578,
1/A/603:607,
1/A/620:622,
1/A/1299:1300,
1/A/2044:2050,
1/A/2067:2070,
1/A/2652:2657,
1/A/2815:2816,
1/A/2913:2914		No text annotation

Problematic loops

#loop idProblemSequence
J3_6S12_016No text annotation
J3_6S12_017No text annotation
J4_6S12_002No text annotation

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