JAR3D
Query RF00210-3.98 completed
Run on Motif Atlas Version
using the Rfam secondary structure. Run with the CaCoFold secondary structure.
Rfam family RF00210 maps to these 3 chains: 2NBX|1|A, 8HUJ|1|C, 8J7R|1|C See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.
Loop 1 Hairpin loop
Column numbers: 7-11 - This loop does not map to nucleotides in a 3D structure with xyz coordinates.
Scored sequences and counts
GUUUC 54
GAAUC 14
GUUCC 7
GUCUC 5
GUCCC 2
ACUUC 1
AUUAU 1
GCCUC 1
GCUCC 1
GUAGC 1
GUAUC 1
GUCGC 1
GUUGC 1
GUC-C 1
Omitted sequenced and counts
----G 1
Click on headings to reorder table
| # | Matching motif group | Acceptance Rate | Mean Cutoff Score | Full Edit Distance | Interior Edit Distance | Basepair Diagram and most common annotation |
|---|---|---|---|---|---|---|
| 1 |
Motif group HL_32346.4
Basepair signature:
|
100.00 | 82.78 | 2 | 0 |
|
| 2 |
Motif group HL_48778.2
Basepair signature:
|
100.00 | 66.79 | 1 | 0 |
Mini UNCG |
| 3 |
Motif group HL_56131.2
Basepair signature:
|
100.00 | 29.73 | 2 | 2 |
|
| 4 |
Motif group HL_53890.2
Basepair signature:
|
98.90 | 30.94 | 3 | 1 |
|
| 5 |
Motif group HL_56334.1
Basepair signature:
|
97.80 | 61.97 | 2 | 1 |
Mini UNCG |
| 6 |
Motif group HL_75660.5
Basepair signature:
|
96.70 | 53.42 | 2 | 1 |
|
| 7 |
Motif group HL_86870.2
Basepair signature:
|
94.51 | 64.53 | 1 | 1 |
|
| 8 |
Motif group HL_69752.2
Basepair signature:
|
92.31 | 42.40 | 3 | 1 |
|
| 9 |
Motif group HL_38901.2
Basepair signature:
|
90.11 | 38.31 | 2 | 1 |
tRNA D-loop |
| 10 |
Motif group HL_48417.5
Basepair signature:
|
87.91 | 40.95 | 2 | 1 |
|
| 11 |
Motif group HL_38168.1
Basepair signature:
|
85.71 | 23.10 | 3 | 2 |
|
| 12 |
Motif group HL_70782.2
Basepair signature:
|
84.62 | 51.11 | 2 | 1 |
|
| 13 |
Motif group HL_35941.1
Basepair signature:
|
83.52 | 10.95 | 4 | 2 |
|
| 14 |
Motif group HL_46501.1
Basepair signature:
|
82.42 | 40.00 | 3 | 1 |
|
| 15 |
Motif group HL_76094.1
Basepair signature:
|
82.42 | 9.91 | 4 | 2 |
|
| 16 |
Motif group HL_26631.1
Basepair signature:
|
82.42 | -116.08 | 4 | 2 |
|
| 17 |
Motif group HL_32392.1
Basepair signature:
|
81.32 | 28.20 | 3 | 1 |
|
| 18 |
Motif group HL_78677.1
Basepair signature:
|
80.22 | 1.39 | 2 | 2 |
|
| 19 |
Motif group HL_60914.1
Basepair signature:
|
80.22 | -4.68 | 4 | 2 |
|
| 20 |
Motif group HL_07886.3
Basepair signature:
|
76.92 | 25.27 | 2 | 0 |
|
| 21 |
Motif group HL_81100.2
Basepair signature:
|
75.82 | -125.37 | 2 | 2 |
|
| 22 |
Motif group HL_13189.1
Basepair signature:
|
74.73 | 12.22 | 4 | 2 |
|
| 23 |
Motif group HL_43517.1
Basepair signature:
|
72.53 | 22.78 | 2 | 1 |
|
| 24 |
Motif group HL_50006.2
Basepair signature:
|
71.43 | 1.31 | 4 | 2 |
|
| 25 |
Motif group HL_94980.1
Basepair signature:
|
70.33 | -5.29 | 3 | 1 |
|
| 26 |
Motif group HL_80709.3
Basepair signature:
|
65.93 | -111.43 | 3 | 1 |
|
| 27 |
Motif group HL_65313.1
Basepair signature:
|
62.64 | -107.28 | 3 | 1 |
|
| 28 |
Motif group HL_57875.1
Basepair signature:
|
61.54 | 0.66 | 1 | 1 |
|
| 29 |
Motif group HL_86883.1
Basepair signature:
|
60.44 | -117.09 | 1 | 1 |
|
| 30 |
Motif group HL_04783.2
Basepair signature:
|
28.57 | -17.39 | 4 | 2 |
|
| 31 |
Motif group HL_82710.2
Basepair signature:
|
16.48 | -33.20 | 3 | 3 |
|
| 32 |
Motif group HL_29966.1
Basepair signature:
|
16.48 | -128.13 | 4 | 2 |
|
| 33 |
Motif group HL_55195.3
Basepair signature:
|
3.30 | -36.41 | 2 | 2 |
|
| 34 |
Motif group HL_71391.1
Basepair signature:
|
2.20 | -36.54 | 2 | 2 |
|
| 35 |
Motif group HL_22135.1
Basepair signature:
|
2.20 | -41.11 | 5 | 3 |
|
| 36 |
Motif group HL_27483.1
Basepair signature:
|
1.10 | -26.83 | 3 | 2 |
|
| 37 |
Motif group HL_89199.2
Basepair signature:
|
1.10 | -147.77 | 4 | 2 |
Mini UNCG |
| 38 |
Motif group HL_66103.1
Basepair signature:
|
0.00 | -34.85 | 4 | 2 |
|
| 39 |
Motif group HL_34617.5
Basepair signature:
|
0.00 | -62.95 | 2 | 1 |
UNCG |
| 40 |
Motif group HL_13963.3
Basepair signature:
|
0.00 | -64.68 | 3 | 3 |
|
| 41 |
Motif group HL_08100.1
Basepair signature:
|
0.00 | -70.31 | 4 | 2 |
|
| 42 |
Motif group HL_26934.1
Basepair signature:
|
0.00 | -75.07 | 3 | 3 |
|
| 43 |
Motif group HL_42046.2
Basepair signature:
|
0.00 | -83.95 | 4 | 3 |
|
| 44 |
Motif group HL_37344.1
Basepair signature:
|
0.00 | -87.71 | 5 | 3 |
|
| 45 |
Motif group HL_80922.2
Basepair signature:
|
0.00 | -88.70 | 3 | 3 |
|
| 46 |
Motif group HL_20811.4
Basepair signature:
|
0.00 | -91.14 | 5 | 3 |
tRNA D-loop |
| 47 |
Motif group HL_62934.1
Basepair signature:
|
0.00 | -93.69 | 5 | 4 |
|
| 48 |
Motif group HL_78347.4
Basepair signature:
|
0.00 | -93.98 | 2 | 1 |
|
| 49 |
Motif group HL_86012.1
Basepair signature:
|
0.00 | -98.18 | 4 | 4 |
T-loop with unstacked turn |
| 50 |
Motif group HL_49922.4
Basepair signature:
|
0.00 | -99.37 | 3 | 2 |
|
| 51 |
Motif group HL_28075.1
Basepair signature:
|
0.00 | -100.27 | 3 | 3 |
|
| 52 |
Motif group HL_22584.6
Basepair signature:
|
0.00 | -102.90 | 5 | 3 |
Fab BL3-6 binding hairpin with tSW |
| 53 |
Motif group HL_47787.2
Basepair signature:
|
0.00 | -104.08 | 3 | 2 |
|
| 54 |
Motif group HL_87954.2
Basepair signature:
|
0.00 | -105.93 | 3 | 3 |
|
| 55 |
Motif group HL_13529.1
Basepair signature:
|
0.00 | -112.10 | 5 | 3 |
|
| 56 |
Motif group HL_83808.4
Basepair signature:
|
0.00 | -115.61 | 6 | 5 |
Pseudoknot |
| 57 |
Motif group HL_50537.6
Basepair signature:
|
0.00 | -118.93 | 4 | 4 |
tRNA anticodon loop with synthetase |
| 58 |
Motif group HL_66853.7
Basepair signature:
|
0.00 | -122.31 | 6 | 5 |
|
| 59 |
Motif group HL_93535.1
Basepair signature:
|
0.00 | -125.85 | 4 | 3 |
|
| 60 |
Motif group HL_20167.2
Basepair signature:
|
0.00 | -126.90 | 4 | 4 |
|
| 61 |
Motif group HL_02887.3
Basepair signature:
|
0.00 | -128.01 | 7 | 6 |
T-loop with 3 stacked bulged bases |
| 62 |
Motif group HL_89893.1
Basepair signature:
|
0.00 | -128.76 | 6 | 5 |
|
| 63 |
Motif group HL_99748.1
Basepair signature:
|
0.00 | -130.90 | 5 | 4 |
Other HL |
| 64 |
Motif group HL_98864.1
Basepair signature:
|
0.00 | -131.17 | 5 | 5 |
T-loop with unstacked turn |
| 65 |
Motif group HL_87553.1
Basepair signature:
|
0.00 | -133.70 | 5 | 4 |
|
| 66 |
Motif group HL_97917.2
Basepair signature:
|
0.00 | -137.46 | 5 | 4 |
|
| 67 |
Motif group HL_86769.4
Basepair signature:
|
0.00 | -139.93 | 5 | 5 |
|
| 68 |
Motif group HL_57863.1
Basepair signature:
|
0.00 | -139.94 | 6 | 6 |
G-quadruplex fragment |
| 69 |
Motif group HL_50318.1
Basepair signature:
|
0.00 | -140.53 | 4 | 3 |
|
| 70 |
Motif group HL_30068.2
Basepair signature:
|
0.00 | -142.61 | 3 | 2 |
|
| 71 |
Motif group HL_56676.1
Basepair signature:
|
0.00 | -143.35 | 4 | 2 |
|
| 72 |
Motif group HL_61996.2
Basepair signature:
|
0.00 | -144.01 | 4 | 4 |
|
| 73 |
Motif group HL_50860.2
Basepair signature:
|
0.00 | -145.12 | 6 | 5 |
|
| 74 |
Motif group HL_81545.2
Basepair signature:
|
0.00 | -145.83 | 5 | 5 |
|
| 75 |
Motif group HL_10540.1
Basepair signature:
|
0.00 | -147.10 | 6 | 5 |
|
| 76 |
Motif group HL_20743.5
Basepair signature:
|
0.00 | -147.25 | 5 | 5 |
|
| 77 |
Motif group HL_18565.1
Basepair signature:
|
0.00 | -148.40 | 7 | 6 |
|
| 78 |
Motif group HL_77436.5
Basepair signature:
|
0.00 | -148.92 | 3 | 3 |
T-loop related |
| 79 |
Motif group HL_93438.2
Basepair signature:
|
0.00 | -150.27 | 6 | 5 |
|
| 80 |
Motif group HL_25967.2
Basepair signature:
|
0.00 | -153.43 | 2 | 2 |
|
| 81 |
Motif group HL_04642.1
Basepair signature:
|
0.00 | -156.95 | 7 | 6 |
tRNA D-loop |
| 82 |
Motif group HL_73266.9
Basepair signature:
|
0.00 | -158.72 | 5 | 4 |
|
| 83 |
Motif group HL_20535.2
Basepair signature:
|
0.00 | -160.89 | 4 | 4 |
|
| 84 |
Motif group HL_41543.1
Basepair signature:
|
0.00 | -163.70 | 6 | 6 |
|
| 85 |
Motif group HL_28252.8
Basepair signature:
|
0.00 | -164.86 | 4 | 4 |
T-loop with 2 stacked bulged bases |
| 86 |
Motif group HL_25847.2
Basepair signature:
|
0.00 | -170.16 | 6 | 6 |
|
| 87 |
Motif group HL_51447.1
Basepair signature:
|
0.00 | -171.72 | 4 | 4 |
|
| 88 |
Motif group HL_89567.2
Basepair signature:
|
0.00 | -173.09 | 6 | 5 |
|
| 89 |
Motif group HL_49941.1
Basepair signature:
|
0.00 | -175.11 | 7 | 6 |
tRNA D-loop |
| 90 |
Motif group HL_37824.7
Basepair signature:
|
0.00 | -176.48 | 2 | 2 |
GNRA |
| 91 |
Motif group HL_59330.1
Basepair signature:
|
0.00 | -177.31 | 5 | 4 |
|
| 92 |
Motif group HL_57176.2
Basepair signature:
|
0.00 | -177.47 | 2 | 2 |
Pseudoknot geometry with 3' bulge |
| 93 |
Motif group HL_41464.2
Basepair signature:
|
0.00 | -177.58 | 5 | 5 |
|
| 94 |
Motif group HL_80599.2
Basepair signature:
|
0.00 | -179.91 | 6 | 4 |
|
| 95 |
Motif group HL_01609.3
Basepair signature:
|
0.00 | -180.15 | 4 | 4 |
T-loop with 2 bulged bases not stacked |
| 96 |
Motif group HL_21372.1
Basepair signature:
|
0.00 | -181.39 | 6 | 4 |
|
| 97 |
Motif group HL_67079.1
Basepair signature:
|
0.00 | -181.42 | 6 | 6 |
|
| 98 |
Motif group HL_15802.1
Basepair signature:
|
0.00 | -182.24 | 7 | 5 |
|
| 99 |
Motif group HL_68257.1
Basepair signature:
|
0.00 | -183.67 | 8 | 7 |
|
| 100 |
Motif group HL_18978.1
Basepair signature:
|
0.00 | -189.00 | 6 | 5 |
|
| 101 |
Motif group HL_23509.1
Basepair signature:
|
0.00 | -189.55 | 7 | 7 |
|
| 102 |
Motif group HL_59843.1
Basepair signature:
|
0.00 | -190.52 | 5 | 4 |
|
| 103 |
Motif group HL_74379.3
Basepair signature:
|
0.00 | -193.22 | 8 | 8 |
|
| 104 |
Motif group HL_98252.1
Basepair signature:
|
0.00 | -194.02 | 8 | 6 |
|
| 105 |
Motif group HL_01962.2
Basepair signature:
|
0.00 | -195.06 | 7 | 6 |
|
| 106 |
Motif group HL_18423.1
Basepair signature:
|
0.00 | -198.83 | 8 | 7 |
|
| 107 |
Motif group HL_04171.7
Basepair signature:
|
0.00 | -203.65 | 7 | 6 |
|
| 108 |
Motif group HL_37369.2
Basepair signature:
|
0.00 | -204.14 | 4 | 3 |
|
| 109 |
Motif group HL_77082.1
Basepair signature:
|
0.00 | -204.42 | 3 | 3 |
Pseudoknot geometry |
| 110 |
Motif group HL_87463.1
Basepair signature:
|
0.00 | -208.29 | 5 | 5 |
|
| 111 |
Motif group HL_73255.1
Basepair signature:
|
0.00 | -208.76 | 6 | 5 |
|
| 112 |
Motif group HL_64690.6
Basepair signature:
|
0.00 | -208.97 | 5 | 4 |
|
| 113 |
Motif group HL_75293.5
Basepair signature:
|
0.00 | -210.19 | 6 | 5 |
|
| 114 |
Motif group HL_89881.5
Basepair signature:
|
0.00 | -210.59 | 6 | 6 |
|
| 115 |
Motif group HL_33983.1
Basepair signature:
|
0.00 | -212.54 | 7 | 5 |
|
| 116 |
Motif group HL_93383.1
Basepair signature:
|
0.00 | -212.82 | 6 | 6 |
|
| 117 |
Motif group HL_90620.1
Basepair signature:
|
0.00 | -213.91 | 9 | 8 |
|
| 118 |
Motif group HL_47854.1
Basepair signature:
|
0.00 | -214.93 | 6 | 6 |
|
| 119 |
Motif group HL_08602.1
Basepair signature:
|
0.00 | -217.85 | 10 | 8 |
|
| 120 |
Motif group HL_36335.1
Basepair signature:
|
0.00 | -224.00 | 9 | 8 |
|
| 121 |
Motif group HL_45175.1
Basepair signature:
|
0.00 | -224.95 | 6 | 5 |
tRNA D-loop |
| 122 |
Motif group HL_70658.1
Basepair signature:
|
0.00 | -224.96 | 8 | 8 |
|
| 123 |
Motif group HL_41902.1
Basepair signature:
|
0.00 | -225.25 | 10 | 10 |
|
| 124 |
Motif group HL_32735.2
Basepair signature:
|
0.00 | -226.93 | 5 | 4 |
|
| 125 |
Motif group HL_58224.1
Basepair signature:
|
0.00 | -227.22 | 7 | 6 |
|
| 126 |
Motif group HL_45785.1
Basepair signature:
|
0.00 | -232.19 | 6 | 6 |
|
| 127 |
Motif group HL_04259.3
Basepair signature:
|
0.00 | -234.23 | 5 | 5 |
GNRA with extra cWW |
| 128 |
Motif group HL_10453.3
Basepair signature:
|
0.00 | -235.09 | 3 | 3 |
tRNA anticodon loop |
| 129 |
Motif group HL_60266.1
Basepair signature:
|
0.00 | -239.03 | 8 | 8 |
|
| 130 |
Motif group HL_16991.1
Basepair signature:
|
0.00 | -241.59 | 9 | 8 |
G-quadruplex fragment |
| 131 |
Motif group HL_27670.2
Basepair signature:
|
0.00 | -243.34 | 3 | 3 |
T-loop with unstacked turn |
| 132 |
Motif group HL_86109.1
Basepair signature:
|
0.00 | -246.64 | 9 | 9 |
|
| 133 |
Motif group HL_07480.2
Basepair signature:
|
0.00 | -246.69 | 8 | 7 |
|
| 134 |
Motif group HL_84299.4
Basepair signature:
|
0.00 | -248.00 | 4 | 4 |
|
| 135 |
Motif group HL_02817.2
Basepair signature:
|
0.00 | -251.24 | 4 | 4 |
|
| 136 |
Motif group HL_07583.1
Basepair signature:
|
0.00 | -252.22 | 9 | 8 |
|
| 137 |
Motif group HL_85993.1
Basepair signature:
|
0.00 | -254.02 | 6 | 5 |
|
| 138 |
Motif group HL_81538.2
Basepair signature:
|
0.00 | -255.53 | 4 | 3 |
GNRA with tandem sheared |
| 139 |
Motif group HL_00914.1
Basepair signature:
|
0.00 | -256.53 | 5 | 5 |
|
| 140 |
Motif group HL_84847.1
Basepair signature:
|
0.00 | -257.53 | 9 | 9 |
|
| 141 |
Motif group HL_40252.4
Basepair signature:
|
0.00 | -258.04 | 9 | 8 |
|
| 142 |
Motif group HL_25061.1
Basepair signature:
|
0.00 | -258.86 | 6 | 6 |
|
| 143 |
Motif group HL_04641.1
Basepair signature:
|
0.00 | -260.23 | 8 | 8 |
|
| 144 |
Motif group HL_06226.4
Basepair signature:
|
0.00 | -260.75 | 7 | 7 |
|
| 145 |
Motif group HL_74055.2
Basepair signature:
|
0.00 | -267.01 | 12 | 10 |
|
| 146 |
Motif group HL_02483.1
Basepair signature:
|
0.00 | -268.00 | 9 | 9 |
|
| 147 |
Motif group HL_59735.5
Basepair signature:
|
0.00 | -268.34 | 5 | 4 |
|
| 148 |
Motif group HL_53504.3
Basepair signature:
|
0.00 | -268.66 | 7 | 7 |
|
| 149 |
Motif group HL_31585.4
Basepair signature:
|
0.00 | -271.26 | 2 | 2 |
Purine riboswitch |
| 150 |
Motif group HL_34964.1
Basepair signature:
|
0.00 | -272.10 | 6 | 6 |
|
| 151 |
Motif group HL_81205.3
Basepair signature:
|
0.00 | -272.87 | 12 | 11 |
|
| 152 |
Motif group HL_23010.1
Basepair signature:
|
0.00 | -281.21 | 9 | 8 |
|
| 153 |
Motif group HL_91939.2
Basepair signature:
|
0.00 | -282.88 | 9 | 8 |
|
| 154 |
Motif group HL_53454.2
Basepair signature:
|
0.00 | -284.97 | 7 | 6 |
|
| 155 |
Motif group HL_30680.3
Basepair signature:
|
0.00 | -291.89 | 4 | 3 |
Pseudoknot geometry |
| 156 |
Motif group HL_73247.1
Basepair signature:
|
0.00 | -302.32 | 11 | 10 |
Pseudoknot geometry |
| 157 |
Motif group HL_05304.3
Basepair signature:
|
0.00 | -310.41 | 8 | 8 |
|
| 158 |
Motif group HL_06059.6
Basepair signature:
|
0.00 | -319.77 | 4 | 4 |
tRNA anticodon loop |
| 159 |
Motif group HL_14757.1
Basepair signature:
|
0.00 | -320.93 | 13 | 13 |
|
| 160 |
Motif group HL_15574.1
Basepair signature:
|
0.00 | -321.55 | 5 | 5 |
|
| 161 |
Motif group HL_13971.1
Basepair signature:
|
0.00 | -326.16 | 9 | 9 |
|
| 162 |
Motif group HL_88205.2
Basepair signature:
|
0.00 | -327.82 | 7 | 6 |
|
| 163 |
Motif group HL_98870.1
Basepair signature:
|
0.00 | -337.50 | 11 | 11 |
|
| 164 |
Motif group HL_91641.1
Basepair signature:
|
0.00 | -338.57 | 13 | 12 |
|
| 165 |
Motif group HL_68767.1
Basepair signature:
|
0.00 | -339.48 | 9 | 9 |
tRNA D-loop |
| 166 |
Motif group HL_77600.2
Basepair signature:
|
0.00 | -340.98 | 4 | 4 |
|
| 167 |
Motif group HL_02581.1
Basepair signature:
|
0.00 | -350.82 | 11 | 11 |
tRNA D-loop |
| 168 |
Motif group HL_51921.1
Basepair signature:
|
0.00 | -416.26 | 16 | 16 |
|
| 169 |
Motif group HL_12870.1
Basepair signature:
|
0.00 | -430.01 | 8 | 8 |
|
| 170 |
Motif group HL_92488.1
Basepair signature:
|
0.00 | -528.83 | 12 | 12 |
|
| 171 |
Motif group HL_97756.2
Basepair signature:
|
0.00 | -536.98 | 11 | 10 |
|
| 172 |
Motif group HL_33074.4
Basepair signature:
|
0.00 | -4014.26 | 8 | 7 |
U1 small nuclear ribonucleoprotein A binding hairpin |
| 173 |
Motif group HL_99324.1
Basepair signature:
|
0.00 | -4016.33 | 12 | 12 |
|
| 174 |
Motif group HL_85461.1
Basepair signature:
|
0.00 | -4032.19 | 15 | 15 |
|
| 175 |
Motif group HL_21400.1
Basepair signature:
|
0.00 | -4065.55 | 19 | 18 |
G-quadruplex |
| 176 |
Motif group HL_60293.1
Basepair signature:
|
0.00 | -4068.01 | 18 | 17 |
G-quadruplex |
| 177 |
Motif group HL_35354.1
Basepair signature:
|
0.00 | -4078.63 | 20 | 19 |
|
| 178 |
Motif group HL_00317.1
Basepair signature:
|
0.00 | -4082.14 | 15 | 15 |
|
| 179 |
Motif group HL_89346.1
Basepair signature:
|
0.00 | -4118.90 | 15 | 14 |
|
| 180 |
Motif group HL_59564.1
Basepair signature:
|
0.00 | -4123.03 | 15 | 15 |
|
| 181 |
Motif group HL_12758.3
Basepair signature:
|
0.00 | -4136.47 | 22 | 22 |
G-quadruplex |
| 182 |
Motif group HL_10456.1
Basepair signature:
|
0.00 | -4205.34 | 15 | 14 |
|
| 183 |
Motif group HL_66482.1
Basepair signature:
|
0.00 | -4207.98 | 14 | 13 |
|
| 184 |
Motif group HL_50851.1
Basepair signature:
|
0.00 | -4447.22 | 9 | 8 |
G-quadruplex fragment |
| 185 |
Motif group HL_73916.1
Basepair signature:
|
0.00 | -4693.84 | 35 | 35 |
|
| 186 |
Motif group HL_04725.1
Basepair signature:
|
0.00 | -4770.13 | 7 | 7 |
|
| 187 |
Motif group HL_07903.1
Basepair signature:
|
0.00 | -4960.84 | 10 | 10 |
|
| 188 |
Motif group HL_31581.6
Basepair signature:
|
0.00 | -4979.70 | 8 | 7 |
|
| 189 |
Motif group HL_88364.2
Basepair signature:
|
0.00 | -5033.24 | 10 | 10 |
|
| 190 |
Motif group HL_63355.1
Basepair signature:
|
0.00 | -5042.92 | 10 | 10 |
|
| 191 |
Motif group HL_93616.2
Basepair signature:
|
0.00 | -5046.88 | 8 | 7 |
tRNA D-loop |
| 192 |
Motif group HL_20751.2
Basepair signature:
|
0.00 | -5069.16 | 10 | 9 |
|
| 193 |
Motif group HL_73183.1
Basepair signature:
|
0.00 | -5143.33 | 13 | 12 |
Pseudoknot geometry with G-bulge |
| 194 |
Motif group HL_67407.5
Basepair signature:
|
0.00 | -5156.37 | 8 | 7 |
|
| 195 |
Motif group HL_85434.1
Basepair signature:
|
0.00 | -5240.25 | 6 | 6 |
|
| 196 |
Motif group HL_15118.1
Basepair signature:
|
0.00 | -5325.69 | 8 | 7 |
|
| 197 |
Motif group HL_50779.4
Basepair signature:
|
0.00 | -5332.18 | 7 | 7 |
|
| 198 |
Motif group HL_81312.1
Basepair signature:
|
0.00 | -5379.82 | 8 | 7 |
|
| 199 |
Motif group HL_99769.3
Basepair signature:
|
0.00 | -5383.12 | 6 | 6 |
|
| 200 |
Motif group HL_23115.1
Basepair signature:
|
0.00 | -5386.73 | 8 | 7 |
tRNA D-loop |
| 201 |
Motif group HL_19210.3
Basepair signature:
|
0.00 | -5405.92 | 5 | 5 |
|
| 202 |
Motif group HL_94376.1
Basepair signature:
|
0.00 | -5412.66 | 7 | 7 |
Pseudoknot geometry |
| 203 |
Motif group HL_70751.1
Basepair signature:
|
0.00 | -5550.29 | 8 | 7 |
|
| 204 |
Motif group HL_55305.1
Basepair signature:
|
0.00 | -5553.82 | 8 | 7 |
|
| 205 |
Motif group HL_11542.1
Basepair signature:
|
0.00 | -5623.50 | 11 | 11 |
|
| 206 |
Motif group HL_91503.7
Basepair signature:
|
0.00 | -5628.83 | 6 | 6 |
|
| 207 |
Motif group HL_88558.1
Basepair signature:
|
0.00 | -5652.18 | 9 | 8 |
|
| 208 |
Motif group HL_80411.1
Basepair signature:
|
0.00 | -5672.56 | 9 | 8 |
tRNA D-loop |
| 209 |
Motif group HL_36684.4
Basepair signature:
|
0.00 | -5703.08 | 6 | 6 |
|
| 210 |
Motif group HL_01255.1
Basepair signature:
|
0.00 | -5711.36 | 10 | 8 |
|
| 211 |
Motif group HL_29762.1
Basepair signature:
|
0.00 | -5731.41 | 7 | 6 |
|
| 212 |
Motif group HL_78284.1
Basepair signature:
|
0.00 | -5750.63 | 10 | 8 |
|
| 213 |
Motif group HL_24792.1
Basepair signature:
|
0.00 | -5825.26 | 5 | 5 |
|
| 214 |
Motif group HL_50418.1
Basepair signature:
|
0.00 | -5832.73 | 8 | 7 |
|
| 215 |
Motif group HL_08510.1
Basepair signature:
|
0.00 | -5840.45 | 5 | 4 |
|
| 216 |
Motif group HL_29129.3
Basepair signature:
|
0.00 | -5889.31 | 5 | 5 |
|
| 217 |
Motif group HL_16398.2
Basepair signature:
|
0.00 | -5946.40 | 10 | 10 |
|
| 218 |
Motif group HL_68572.1
Basepair signature:
|
0.00 | -5951.46 | 10 | 10 |
|
| 219 |
Motif group HL_93135.1
Basepair signature:
|
0.00 | -5994.23 | 8 | 6 |
Pseudoknot |
| 220 |
Motif group HL_38649.1
Basepair signature:
|
0.00 | -6064.18 | 8 | 7 |
|
| 221 |
Motif group HL_97733.1
Basepair signature:
|
0.00 | -6094.15 | 8 | 7 |
|
| 222 |
Motif group HL_74292.1
Basepair signature:
|
0.00 | -6104.92 | 8 | 8 |
|
| 223 |
Motif group HL_47732.1
Basepair signature:
|
0.00 | -6149.32 | 10 | 9 |
|
| 224 |
Motif group HL_64292.1
Basepair signature:
|
0.00 | -6253.46 | 11 | 11 |
|
| 225 |
Motif group HL_55436.1
Basepair signature:
|
0.00 | -6275.34 | 7 | 7 |
|
| 226 |
Motif group HL_29958.1
Basepair signature:
|
0.00 | -6349.07 | 9 | 8 |
|
| 227 |
Motif group HL_69139.1
Basepair signature:
|
0.00 | -6550.04 | 7 | 5 |
|
| 228 |
Motif group HL_35677.3
Basepair signature:
|
0.00 | -6725.27 | 5 | 4 |
|
| 229 |
Motif group HL_99867.1
Basepair signature:
|
0.00 | -6741.36 | 5 | 5 |
|
| 230 |
Motif group HL_38046.1
Basepair signature:
|
0.00 | -6789.25 | 7 | 6 |
|
| 231 |
Motif group HL_85367.2
Basepair signature:
|
0.00 | -6871.53 | 6 | 4 |
|
| 232 |
Motif group HL_83632.1
Basepair signature:
|
0.00 | -7104.86 | 6 | 5 |
tRNA anticodon loop |
| 233 |
Motif group HL_80362.1
Basepair signature:
|
0.00 | -7144.41 | 7 | 6 |
|
| 234 |
Motif group HL_80008.1
Basepair signature:
|
0.00 | -7230.62 | 6 | 5 |
|
| 235 |
Motif group HL_72628.1
Basepair signature:
|
0.00 | -7299.56 | 7 | 6 |
|
| 236 |
Motif group HL_20781.1
Basepair signature:
|
0.00 | -7385.31 | 10 | 8 |
|
| 237 |
Motif group HL_80241.1
Basepair signature:
|
0.00 | -7678.65 | 4 | 4 |
|
| 238 |
Motif group HL_38808.1
Basepair signature:
|
0.00 | -7721.00 | 6 | 4 |
|
| 239 |
Motif group HL_42998.2
Basepair signature:
|
0.00 | -7940.16 | 5 | 5 |
|
| 240 |
Motif group HL_22622.1
Basepair signature:
|
0.00 | -8450.01 | 6 | 5 |
|
| 241 |
Motif group HL_09452.1
Basepair signature:
|
0.00 | -8556.89 | 4 | 4 |
|
| 242 |
Motif group HL_58539.1
Basepair signature:
|
0.00 | -8576.47 | 12 | 11 |
|
| 243 |
Motif group HL_97983.1
Basepair signature:
|
0.00 | -8673.99 | 5 | 4 |
|
| 244 |
Motif group HL_99040.1
Basepair signature:
|
0.00 | -8689.96 | 4 | 3 |
|
| 245 |
Motif group HL_67667.2
Basepair signature:
|
0.00 | -9369.89 | 3 | 2 |
|
| 246 |
Motif group HL_78197.1
Basepair signature:
|
0.00 | -9951.97 | 4 | 3 |
|
| 247 |
Motif group HL_07951.3
Basepair signature:
|
0.00 | -9999.00 | 7 | 6 |
tRNA D-loop |
| 248 |
Motif group HL_09260.2
Basepair signature:
|
0.00 | -9999.00 | 8 | 7 |
tRNA D-loop |
| 249 |
Motif group HL_28791.1
Basepair signature:
|
0.00 | -9999.00 | 4 | 3 |
|
| 250 |
Motif group HL_39243.1
Basepair signature:
|
0.00 | -9999.00 | 4 | 4 |
|
| 251 |
Motif group HL_52953.3
Basepair signature:
|
0.00 | -9999.00 | 3 | 3 |
|
| 252 |
Motif group HL_65794.5
Basepair signature:
|
0.00 | -9999.00 | 3 | 2 |
Pseudoknot geometry |
| 253 |
Motif group HL_93324.4
Basepair signature:
|
0.00 | -9999.00 | 3 | 3 |
Pseudoknot geometry |