JAR3D
Query RF00210-3.98 completed
Run on Motif Atlas Version
using the Rfam secondary structure. Run with the CaCoFold secondary structure.
Rfam family RF00210 maps to these 3 chains: 2NBX|1|A, 8HUJ|1|C, 8J7R|1|C See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.
Loop 26 Hairpin loop
Column numbers: 531-536 - This loop does not map to nucleotides in a 3D structure with xyz coordinates.
Scored sequences and counts
GAGG-C 83
GAGG-U 4
GUGGGC 2
GGGA-U 1
GAG--C 1
--GG-A 1
Click on headings to reorder table
| # | Matching motif group | Acceptance Rate | Mean Cutoff Score | Full Edit Distance | Interior Edit Distance | Basepair Diagram and most common annotation |
|---|---|---|---|---|---|---|
| 1 |
Motif group HL_75660.5
Basepair signature:
|
98.91 | -68.40 | 1 | 1 |
|
| 2 |
Motif group HL_48417.5
Basepair signature:
|
96.74 | 53.78 | 3 | 1 |
|
| 3 |
Motif group HL_38901.2
Basepair signature:
|
96.74 | 39.47 | 1 | 1 |
tRNA D-loop |
| 4 |
Motif group HL_60914.1
Basepair signature:
|
96.74 | -63.21 | 3 | 1 |
|
| 5 |
Motif group HL_26631.1
Basepair signature:
|
94.57 | -85.31 | 3 | 1 |
|
| 6 |
Motif group HL_56131.2
Basepair signature:
|
92.39 | -0.32 | 2 | 2 |
|
| 7 |
Motif group HL_35941.1
Basepair signature:
|
91.30 | 9.76 | 4 | 2 |
|
| 8 |
Motif group HL_38168.1
Basepair signature:
|
91.30 | -101.78 | 4 | 2 |
|
| 9 |
Motif group HL_86870.2
Basepair signature:
|
90.22 | 0.92 | 3 | 2 |
|
| 10 |
Motif group HL_32392.1
Basepair signature:
|
90.22 | -2.29 | 4 | 2 |
|
| 11 |
Motif group HL_55195.3
Basepair signature:
|
3.26 | -171.46 | 3 | 2 |
|
| 12 |
Motif group HL_32346.4
Basepair signature:
|
2.17 | -24.22 | 2 | 2 |
|
| 13 |
Motif group HL_46501.1
Basepair signature:
|
2.17 | -36.73 | 4 | 3 |
|
| 14 |
Motif group HL_20811.4
Basepair signature:
|
2.17 | -37.05 | 4 | 3 |
tRNA D-loop |
| 15 |
Motif group HL_78677.1
Basepair signature:
|
2.17 | -46.17 | 3 | 3 |
|
| 16 |
Motif group HL_50006.2
Basepair signature:
|
2.17 | -71.46 | 3 | 3 |
|
| 17 |
Motif group HL_69752.2
Basepair signature:
|
2.17 | -151.28 | 5 | 3 |
|
| 18 |
Motif group HL_93535.1
Basepair signature:
|
2.17 | -178.64 | 3 | 1 |
|
| 19 |
Motif group HL_81100.2
Basepair signature:
|
2.17 | -272.61 | 3 | 3 |
|
| 20 |
Motif group HL_56676.1
Basepair signature:
|
2.17 | -300.44 | 4 | 3 |
|
| 21 |
Motif group HL_99040.1
Basepair signature:
|
2.17 | -8475.79 | 4 | 2 |
|
| 22 |
Motif group HL_56334.1
Basepair signature:
|
1.09 | -10.40 | 2 | 2 |
Mini UNCG |
| 23 |
Motif group HL_48778.2
Basepair signature:
|
1.09 | -10.75 | 2 | 1 |
Mini UNCG |
| 24 |
Motif group HL_13189.1
Basepair signature:
|
1.09 | -13.11 | 5 | 3 |
|
| 25 |
Motif group HL_04783.2
Basepair signature:
|
1.09 | -31.14 | 3 | 2 |
|
| 26 |
Motif group HL_27483.1
Basepair signature:
|
1.09 | -40.70 | 4 | 2 |
|
| 27 |
Motif group HL_82710.2
Basepair signature:
|
1.09 | -50.65 | 3 | 3 |
|
| 28 |
Motif group HL_13963.3
Basepair signature:
|
1.09 | -52.88 | 3 | 3 |
|
| 29 |
Motif group HL_94980.1
Basepair signature:
|
1.09 | -196.25 | 4 | 3 |
|
| 30 |
Motif group HL_80709.3
Basepair signature:
|
1.09 | -205.28 | 3 | 3 |
|
| 31 |
Motif group HL_07886.3
Basepair signature:
|
0.00 | -6.06 | 3 | 2 |
|
| 32 |
Motif group HL_70782.2
Basepair signature:
|
0.00 | -32.58 | 3 | 3 |
|
| 33 |
Motif group HL_76094.1
Basepair signature:
|
0.00 | -35.74 | 4 | 2 |
|
| 34 |
Motif group HL_53890.2
Basepair signature:
|
0.00 | -39.72 | 4 | 3 |
|
| 35 |
Motif group HL_49922.4
Basepair signature:
|
0.00 | -49.04 | 4 | 2 |
|
| 36 |
Motif group HL_57875.1
Basepair signature:
|
0.00 | -54.53 | 3 | 3 |
|
| 37 |
Motif group HL_43517.1
Basepair signature:
|
0.00 | -60.22 | 5 | 3 |
|
| 38 |
Motif group HL_71391.1
Basepair signature:
|
0.00 | -70.34 | 3 | 3 |
|
| 39 |
Motif group HL_62934.1
Basepair signature:
|
0.00 | -92.57 | 4 | 3 |
|
| 40 |
Motif group HL_80922.2
Basepair signature:
|
0.00 | -99.68 | 3 | 3 |
|
| 41 |
Motif group HL_37824.7
Basepair signature:
|
0.00 | -105.78 | 2 | 1 |
GNRA |
| 42 |
Motif group HL_66103.1
Basepair signature:
|
0.00 | -110.56 | 5 | 4 |
|
| 43 |
Motif group HL_10540.1
Basepair signature:
|
0.00 | -112.40 | 4 | 3 |
|
| 44 |
Motif group HL_86012.1
Basepair signature:
|
0.00 | -116.17 | 6 | 6 |
T-loop with unstacked turn |
| 45 |
Motif group HL_34617.5
Basepair signature:
|
0.00 | -117.60 | 2 | 2 |
UNCG |
| 46 |
Motif group HL_50860.2
Basepair signature:
|
0.00 | -121.47 | 4 | 4 |
|
| 47 |
Motif group HL_26934.1
Basepair signature:
|
0.00 | -122.11 | 5 | 5 |
|
| 48 |
Motif group HL_20743.5
Basepair signature:
|
0.00 | -122.87 | 4 | 4 |
|
| 49 |
Motif group HL_20167.2
Basepair signature:
|
0.00 | -123.34 | 4 | 4 |
|
| 50 |
Motif group HL_87553.1
Basepair signature:
|
0.00 | -127.23 | 4 | 3 |
|
| 51 |
Motif group HL_22584.6
Basepair signature:
|
0.00 | -132.14 | 4 | 3 |
Fab BL3-6 binding hairpin with tSW |
| 52 |
Motif group HL_86769.4
Basepair signature:
|
0.00 | -133.59 | 5 | 4 |
|
| 53 |
Motif group HL_83808.4
Basepair signature:
|
0.00 | -137.42 | 7 | 6 |
Pseudoknot |
| 54 |
Motif group HL_13529.1
Basepair signature:
|
0.00 | -137.82 | 5 | 4 |
|
| 55 |
Motif group HL_89567.2
Basepair signature:
|
0.00 | -141.92 | 5 | 4 |
|
| 56 |
Motif group HL_42046.2
Basepair signature:
|
0.00 | -142.61 | 5 | 4 |
|
| 57 |
Motif group HL_57176.2
Basepair signature:
|
0.00 | -146.07 | 2 | 2 |
Pseudoknot geometry with 3' bulge |
| 58 |
Motif group HL_57863.1
Basepair signature:
|
0.00 | -147.25 | 4 | 4 |
G-quadruplex fragment |
| 59 |
Motif group HL_89893.1
Basepair signature:
|
0.00 | -148.48 | 3 | 2 |
|
| 60 |
Motif group HL_93438.2
Basepair signature:
|
0.00 | -150.33 | 6 | 5 |
|
| 61 |
Motif group HL_87954.2
Basepair signature:
|
0.00 | -150.63 | 3 | 3 |
|
| 62 |
Motif group HL_08100.1
Basepair signature:
|
0.00 | -150.93 | 5 | 4 |
|
| 63 |
Motif group HL_61996.2
Basepair signature:
|
0.00 | -152.43 | 5 | 5 |
|
| 64 |
Motif group HL_02887.3
Basepair signature:
|
0.00 | -155.74 | 7 | 7 |
T-loop with 3 stacked bulged bases |
| 65 |
Motif group HL_29966.1
Basepair signature:
|
0.00 | -160.41 | 5 | 3 |
|
| 66 |
Motif group HL_28252.8
Basepair signature:
|
0.00 | -163.57 | 4 | 4 |
T-loop with 2 stacked bulged bases |
| 67 |
Motif group HL_22135.1
Basepair signature:
|
0.00 | -164.24 | 5 | 3 |
|
| 68 |
Motif group HL_41902.1
Basepair signature:
|
0.00 | -167.27 | 8 | 7 |
|
| 69 |
Motif group HL_81545.2
Basepair signature:
|
0.00 | -167.85 | 6 | 6 |
|
| 70 |
Motif group HL_41543.1
Basepair signature:
|
0.00 | -167.95 | 7 | 7 |
|
| 71 |
Motif group HL_01609.3
Basepair signature:
|
0.00 | -169.79 | 5 | 4 |
T-loop with 2 bulged bases not stacked |
| 72 |
Motif group HL_36335.1
Basepair signature:
|
0.00 | -171.79 | 7 | 5 |
|
| 73 |
Motif group HL_49941.1
Basepair signature:
|
0.00 | -174.05 | 7 | 6 |
tRNA D-loop |
| 74 |
Motif group HL_15802.1
Basepair signature:
|
0.00 | -179.81 | 7 | 5 |
|
| 75 |
Motif group HL_86883.1
Basepair signature:
|
0.00 | -180.54 | 3 | 3 |
|
| 76 |
Motif group HL_97917.2
Basepair signature:
|
0.00 | -181.41 | 2 | 2 |
|
| 77 |
Motif group HL_28075.1
Basepair signature:
|
0.00 | -187.52 | 5 | 5 |
|
| 78 |
Motif group HL_98864.1
Basepair signature:
|
0.00 | -189.13 | 5 | 5 |
T-loop with unstacked turn |
| 79 |
Motif group HL_04642.1
Basepair signature:
|
0.00 | -190.89 | 7 | 5 |
tRNA D-loop |
| 80 |
Motif group HL_89199.2
Basepair signature:
|
0.00 | -191.64 | 4 | 3 |
Mini UNCG |
| 81 |
Motif group HL_74379.3
Basepair signature:
|
0.00 | -194.50 | 7 | 7 |
|
| 82 |
Motif group HL_77436.5
Basepair signature:
|
0.00 | -196.41 | 4 | 4 |
T-loop related |
| 83 |
Motif group HL_04171.7
Basepair signature:
|
0.00 | -196.45 | 7 | 6 |
|
| 84 |
Motif group HL_37369.2
Basepair signature:
|
0.00 | -197.87 | 5 | 3 |
|
| 85 |
Motif group HL_25847.2
Basepair signature:
|
0.00 | -198.40 | 7 | 7 |
|
| 86 |
Motif group HL_50318.1
Basepair signature:
|
0.00 | -201.39 | 6 | 5 |
|
| 87 |
Motif group HL_65313.1
Basepair signature:
|
0.00 | -201.94 | 6 | 4 |
|
| 88 |
Motif group HL_99748.1
Basepair signature:
|
0.00 | -204.59 | 6 | 4 |
Other HL |
| 89 |
Motif group HL_18978.1
Basepair signature:
|
0.00 | -207.99 | 7 | 6 |
|
| 90 |
Motif group HL_66853.7
Basepair signature:
|
0.00 | -208.74 | 6 | 4 |
|
| 91 |
Motif group HL_18423.1
Basepair signature:
|
0.00 | -210.79 | 8 | 7 |
|
| 92 |
Motif group HL_73266.9
Basepair signature:
|
0.00 | -213.27 | 6 | 6 |
|
| 93 |
Motif group HL_78347.4
Basepair signature:
|
0.00 | -213.58 | 4 | 4 |
|
| 94 |
Motif group HL_86109.1
Basepair signature:
|
0.00 | -215.14 | 8 | 8 |
|
| 95 |
Motif group HL_07480.2
Basepair signature:
|
0.00 | -216.48 | 8 | 6 |
|
| 96 |
Motif group HL_18565.1
Basepair signature:
|
0.00 | -218.79 | 6 | 5 |
|
| 97 |
Motif group HL_41464.2
Basepair signature:
|
0.00 | -219.11 | 6 | 6 |
|
| 98 |
Motif group HL_90620.1
Basepair signature:
|
0.00 | -219.48 | 9 | 7 |
|
| 99 |
Motif group HL_37344.1
Basepair signature:
|
0.00 | -221.36 | 6 | 4 |
|
| 100 |
Motif group HL_70658.1
Basepair signature:
|
0.00 | -223.10 | 9 | 8 |
|
| 101 |
Motif group HL_40252.4
Basepair signature:
|
0.00 | -224.02 | 8 | 6 |
|
| 102 |
Motif group HL_04259.3
Basepair signature:
|
0.00 | -227.61 | 4 | 4 |
GNRA with extra cWW |
| 103 |
Motif group HL_50537.6
Basepair signature:
|
0.00 | -227.99 | 6 | 4 |
tRNA anticodon loop with synthetase |
| 104 |
Motif group HL_67079.1
Basepair signature:
|
0.00 | -228.37 | 8 | 8 |
|
| 105 |
Motif group HL_60266.1
Basepair signature:
|
0.00 | -229.04 | 7 | 7 |
|
| 106 |
Motif group HL_01962.2
Basepair signature:
|
0.00 | -229.64 | 8 | 7 |
|
| 107 |
Motif group HL_59843.1
Basepair signature:
|
0.00 | -236.12 | 3 | 2 |
|
| 108 |
Motif group HL_08602.1
Basepair signature:
|
0.00 | -237.98 | 10 | 9 |
|
| 109 |
Motif group HL_81205.3
Basepair signature:
|
0.00 | -239.28 | 10 | 9 |
|
| 110 |
Motif group HL_06226.4
Basepair signature:
|
0.00 | -239.30 | 6 | 6 |
|
| 111 |
Motif group HL_91939.2
Basepair signature:
|
0.00 | -247.83 | 9 | 7 |
|
| 112 |
Motif group HL_58224.1
Basepair signature:
|
0.00 | -247.86 | 7 | 5 |
|
| 113 |
Motif group HL_07583.1
Basepair signature:
|
0.00 | -248.11 | 10 | 8 |
|
| 114 |
Motif group HL_47854.1
Basepair signature:
|
0.00 | -250.87 | 4 | 4 |
|
| 115 |
Motif group HL_04641.1
Basepair signature:
|
0.00 | -257.13 | 6 | 5 |
|
| 116 |
Motif group HL_16991.1
Basepair signature:
|
0.00 | -257.64 | 8 | 7 |
G-quadruplex fragment |
| 117 |
Motif group HL_53504.3
Basepair signature:
|
0.00 | -260.56 | 6 | 6 |
|
| 118 |
Motif group HL_25967.2
Basepair signature:
|
0.00 | -263.35 | 5 | 5 |
|
| 119 |
Motif group HL_34964.1
Basepair signature:
|
0.00 | -266.30 | 6 | 6 |
|
| 120 |
Motif group HL_75293.5
Basepair signature:
|
0.00 | -266.61 | 6 | 5 |
|
| 121 |
Motif group HL_68257.1
Basepair signature:
|
0.00 | -266.74 | 8 | 8 |
|
| 122 |
Motif group HL_45175.1
Basepair signature:
|
0.00 | -267.41 | 6 | 4 |
tRNA D-loop |
| 123 |
Motif group HL_47787.2
Basepair signature:
|
0.00 | -270.26 | 4 | 3 |
|
| 124 |
Motif group HL_87463.1
Basepair signature:
|
0.00 | -272.39 | 6 | 6 |
|
| 125 |
Motif group HL_23509.1
Basepair signature:
|
0.00 | -275.64 | 9 | 9 |
|
| 126 |
Motif group HL_89881.5
Basepair signature:
|
0.00 | -277.96 | 7 | 7 |
|
| 127 |
Motif group HL_93383.1
Basepair signature:
|
0.00 | -278.46 | 5 | 5 |
|
| 128 |
Motif group HL_74055.2
Basepair signature:
|
0.00 | -280.21 | 11 | 11 |
|
| 129 |
Motif group HL_84299.4
Basepair signature:
|
0.00 | -289.54 | 4 | 4 |
|
| 130 |
Motif group HL_27670.2
Basepair signature:
|
0.00 | -290.50 | 3 | 3 |
T-loop with unstacked turn |
| 131 |
Motif group HL_84847.1
Basepair signature:
|
0.00 | -291.28 | 11 | 11 |
|
| 132 |
Motif group HL_02483.1
Basepair signature:
|
0.00 | -292.18 | 8 | 7 |
|
| 133 |
Motif group HL_73255.1
Basepair signature:
|
0.00 | -300.24 | 7 | 6 |
|
| 134 |
Motif group HL_98252.1
Basepair signature:
|
0.00 | -301.20 | 10 | 8 |
|
| 135 |
Motif group HL_68767.1
Basepair signature:
|
0.00 | -301.71 | 8 | 8 |
tRNA D-loop |
| 136 |
Motif group HL_25061.1
Basepair signature:
|
0.00 | -302.23 | 5 | 4 |
|
| 137 |
Motif group HL_73247.1
Basepair signature:
|
0.00 | -302.83 | 10 | 10 |
Pseudoknot geometry |
| 138 |
Motif group HL_23010.1
Basepair signature:
|
0.00 | -307.22 | 8 | 6 |
|
| 139 |
Motif group HL_98870.1
Basepair signature:
|
0.00 | -312.28 | 11 | 10 |
|
| 140 |
Motif group HL_20535.2
Basepair signature:
|
0.00 | -313.02 | 5 | 5 |
|
| 141 |
Motif group HL_33983.1
Basepair signature:
|
0.00 | -318.42 | 7 | 6 |
|
| 142 |
Motif group HL_64690.6
Basepair signature:
|
0.00 | -319.44 | 4 | 4 |
|
| 143 |
Motif group HL_45785.1
Basepair signature:
|
0.00 | -331.45 | 9 | 9 |
|
| 144 |
Motif group HL_53454.2
Basepair signature:
|
0.00 | -336.44 | 6 | 5 |
|
| 145 |
Motif group HL_30068.2
Basepair signature:
|
0.00 | -337.14 | 4 | 4 |
|
| 146 |
Motif group HL_13971.1
Basepair signature:
|
0.00 | -340.74 | 11 | 10 |
|
| 147 |
Motif group HL_81538.2
Basepair signature:
|
0.00 | -344.15 | 4 | 4 |
GNRA with tandem sheared |
| 148 |
Motif group HL_21372.1
Basepair signature:
|
0.00 | -344.83 | 7 | 5 |
|
| 149 |
Motif group HL_14757.1
Basepair signature:
|
0.00 | -345.37 | 15 | 15 |
|
| 150 |
Motif group HL_05304.3
Basepair signature:
|
0.00 | -348.34 | 8 | 8 |
|
| 151 |
Motif group HL_02581.1
Basepair signature:
|
0.00 | -349.77 | 10 | 10 |
tRNA D-loop |
| 152 |
Motif group HL_91641.1
Basepair signature:
|
0.00 | -350.19 | 14 | 13 |
|
| 153 |
Motif group HL_80599.2
Basepair signature:
|
0.00 | -354.91 | 6 | 4 |
|
| 154 |
Motif group HL_10453.3
Basepair signature:
|
0.00 | -357.40 | 4 | 4 |
tRNA anticodon loop |
| 155 |
Motif group HL_77082.1
Basepair signature:
|
0.00 | -367.45 | 5 | 5 |
Pseudoknot geometry |
| 156 |
Motif group HL_00914.1
Basepair signature:
|
0.00 | -370.61 | 5 | 5 |
|
| 157 |
Motif group HL_88205.2
Basepair signature:
|
0.00 | -374.86 | 6 | 6 |
|
| 158 |
Motif group HL_59330.1
Basepair signature:
|
0.00 | -378.82 | 6 | 4 |
|
| 159 |
Motif group HL_02817.2
Basepair signature:
|
0.00 | -379.52 | 5 | 5 |
|
| 160 |
Motif group HL_31585.4
Basepair signature:
|
0.00 | -393.40 | 4 | 3 |
Purine riboswitch |
| 161 |
Motif group HL_51447.1
Basepair signature:
|
0.00 | -406.89 | 3 | 3 |
|
| 162 |
Motif group HL_15574.1
Basepair signature:
|
0.00 | -410.83 | 4 | 4 |
|
| 163 |
Motif group HL_06059.6
Basepair signature:
|
0.00 | -418.82 | 5 | 4 |
tRNA anticodon loop |
| 164 |
Motif group HL_32735.2
Basepair signature:
|
0.00 | -462.71 | 7 | 6 |
|
| 165 |
Motif group HL_51921.1
Basepair signature:
|
0.00 | -464.20 | 16 | 16 |
|
| 166 |
Motif group HL_92488.1
Basepair signature:
|
0.00 | -519.93 | 11 | 11 |
|
| 167 |
Motif group HL_85993.1
Basepair signature:
|
0.00 | -520.32 | 5 | 5 |
|
| 168 |
Motif group HL_97756.2
Basepair signature:
|
0.00 | -541.78 | 11 | 10 |
|
| 169 |
Motif group HL_12870.1
Basepair signature:
|
0.00 | -551.73 | 9 | 9 |
|
| 170 |
Motif group HL_30680.3
Basepair signature:
|
0.00 | -586.10 | 2 | 2 |
Pseudoknot geometry |
| 171 |
Motif group HL_59735.5
Basepair signature:
|
0.00 | -596.72 | 5 | 3 |
|
| 172 |
Motif group HL_77600.2
Basepair signature:
|
0.00 | -644.60 | 4 | 4 |
|
| 173 |
Motif group HL_99324.1
Basepair signature:
|
0.00 | -4005.04 | 13 | 12 |
|
| 174 |
Motif group HL_33074.4
Basepair signature:
|
0.00 | -4026.43 | 9 | 8 |
U1 small nuclear ribonucleoprotein A binding hairpin |
| 175 |
Motif group HL_85461.1
Basepair signature:
|
0.00 | -4032.97 | 15 | 15 |
|
| 176 |
Motif group HL_21400.1
Basepair signature:
|
0.00 | -4062.71 | 19 | 18 |
G-quadruplex |
| 177 |
Motif group HL_60293.1
Basepair signature:
|
0.00 | -4067.42 | 17 | 17 |
G-quadruplex |
| 178 |
Motif group HL_35354.1
Basepair signature:
|
0.00 | -4075.78 | 20 | 19 |
|
| 179 |
Motif group HL_00317.1
Basepair signature:
|
0.00 | -4103.04 | 18 | 17 |
|
| 180 |
Motif group HL_12758.3
Basepair signature:
|
0.00 | -4117.52 | 20 | 20 |
G-quadruplex |
| 181 |
Motif group HL_89346.1
Basepair signature:
|
0.00 | -4124.58 | 15 | 14 |
|
| 182 |
Motif group HL_59564.1
Basepair signature:
|
0.00 | -4144.20 | 18 | 17 |
|
| 183 |
Motif group HL_10456.1
Basepair signature:
|
0.00 | -4202.88 | 13 | 13 |
|
| 184 |
Motif group HL_66482.1
Basepair signature:
|
0.00 | -4208.33 | 13 | 13 |
|
| 185 |
Motif group HL_50851.1
Basepair signature:
|
0.00 | -4433.95 | 7 | 7 |
G-quadruplex fragment |
| 186 |
Motif group HL_73916.1
Basepair signature:
|
0.00 | -4694.15 | 35 | 35 |
|
| 187 |
Motif group HL_04725.1
Basepair signature:
|
0.00 | -4784.06 | 8 | 8 |
|
| 188 |
Motif group HL_93616.2
Basepair signature:
|
0.00 | -4916.54 | 7 | 6 |
tRNA D-loop |
| 189 |
Motif group HL_07903.1
Basepair signature:
|
0.00 | -4973.74 | 10 | 10 |
|
| 190 |
Motif group HL_31581.6
Basepair signature:
|
0.00 | -4994.75 | 9 | 8 |
|
| 191 |
Motif group HL_88364.2
Basepair signature:
|
0.00 | -5028.53 | 11 | 11 |
|
| 192 |
Motif group HL_63355.1
Basepair signature:
|
0.00 | -5033.96 | 9 | 9 |
|
| 193 |
Motif group HL_20751.2
Basepair signature:
|
0.00 | -5063.29 | 9 | 8 |
|
| 194 |
Motif group HL_73183.1
Basepair signature:
|
0.00 | -5122.97 | 10 | 10 |
Pseudoknot geometry with G-bulge |
| 195 |
Motif group HL_85434.1
Basepair signature:
|
0.00 | -5133.46 | 7 | 7 |
|
| 196 |
Motif group HL_67407.5
Basepair signature:
|
0.00 | -5146.27 | 6 | 6 |
|
| 197 |
Motif group HL_99769.3
Basepair signature:
|
0.00 | -5280.16 | 6 | 6 |
|
| 198 |
Motif group HL_50779.4
Basepair signature:
|
0.00 | -5300.74 | 5 | 5 |
|
| 199 |
Motif group HL_15118.1
Basepair signature:
|
0.00 | -5341.86 | 9 | 8 |
|
| 200 |
Motif group HL_23115.1
Basepair signature:
|
0.00 | -5371.13 | 7 | 6 |
tRNA D-loop |
| 201 |
Motif group HL_94376.1
Basepair signature:
|
0.00 | -5400.55 | 6 | 6 |
Pseudoknot geometry |
| 202 |
Motif group HL_81312.1
Basepair signature:
|
0.00 | -5410.32 | 10 | 9 |
|
| 203 |
Motif group HL_19210.3
Basepair signature:
|
0.00 | -5419.86 | 7 | 6 |
|
| 204 |
Motif group HL_11542.1
Basepair signature:
|
0.00 | -5455.56 | 8 | 8 |
|
| 205 |
Motif group HL_70751.1
Basepair signature:
|
0.00 | -5555.74 | 9 | 7 |
|
| 206 |
Motif group HL_55305.1
Basepair signature:
|
0.00 | -5571.10 | 9 | 8 |
|
| 207 |
Motif group HL_91503.7
Basepair signature:
|
0.00 | -5625.89 | 7 | 6 |
|
| 208 |
Motif group HL_80411.1
Basepair signature:
|
0.00 | -5644.73 | 8 | 6 |
tRNA D-loop |
| 209 |
Motif group HL_88558.1
Basepair signature:
|
0.00 | -5678.21 | 9 | 9 |
|
| 210 |
Motif group HL_36684.4
Basepair signature:
|
0.00 | -5703.62 | 6 | 6 |
|
| 211 |
Motif group HL_01255.1
Basepair signature:
|
0.00 | -5717.14 | 10 | 8 |
|
| 212 |
Motif group HL_08510.1
Basepair signature:
|
0.00 | -5734.83 | 6 | 5 |
|
| 213 |
Motif group HL_78284.1
Basepair signature:
|
0.00 | -5738.48 | 8 | 7 |
|
| 214 |
Motif group HL_29762.1
Basepair signature:
|
0.00 | -5749.18 | 8 | 7 |
|
| 215 |
Motif group HL_29129.3
Basepair signature:
|
0.00 | -5774.73 | 6 | 6 |
|
| 216 |
Motif group HL_24792.1
Basepair signature:
|
0.00 | -5792.60 | 7 | 7 |
|
| 217 |
Motif group HL_50418.1
Basepair signature:
|
0.00 | -5821.28 | 6 | 6 |
|
| 218 |
Motif group HL_38649.1
Basepair signature:
|
0.00 | -5919.65 | 7 | 7 |
|
| 219 |
Motif group HL_16398.2
Basepair signature:
|
0.00 | -5935.41 | 8 | 8 |
|
| 220 |
Motif group HL_68572.1
Basepair signature:
|
0.00 | -5941.32 | 9 | 9 |
|
| 221 |
Motif group HL_97733.1
Basepair signature:
|
0.00 | -5945.91 | 7 | 6 |
|
| 222 |
Motif group HL_93135.1
Basepair signature:
|
0.00 | -5999.76 | 7 | 6 |
Pseudoknot |
| 223 |
Motif group HL_74292.1
Basepair signature:
|
0.00 | -6058.59 | 5 | 5 |
|
| 224 |
Motif group HL_55436.1
Basepair signature:
|
0.00 | -6100.54 | 5 | 5 |
|
| 225 |
Motif group HL_47732.1
Basepair signature:
|
0.00 | -6159.96 | 10 | 9 |
|
| 226 |
Motif group HL_64292.1
Basepair signature:
|
0.00 | -6258.51 | 11 | 11 |
|
| 227 |
Motif group HL_29958.1
Basepair signature:
|
0.00 | -6369.10 | 10 | 9 |
|
| 228 |
Motif group HL_69139.1
Basepair signature:
|
0.00 | -6582.04 | 9 | 7 |
|
| 229 |
Motif group HL_38046.1
Basepair signature:
|
0.00 | -6656.42 | 7 | 6 |
|
| 230 |
Motif group HL_85367.2
Basepair signature:
|
0.00 | -6708.21 | 5 | 3 |
|
| 231 |
Motif group HL_99867.1
Basepair signature:
|
0.00 | -6741.48 | 5 | 5 |
|
| 232 |
Motif group HL_35677.3
Basepair signature:
|
0.00 | -6762.04 | 6 | 6 |
|
| 233 |
Motif group HL_83632.1
Basepair signature:
|
0.00 | -6959.03 | 6 | 5 |
tRNA anticodon loop |
| 234 |
Motif group HL_80362.1
Basepair signature:
|
0.00 | -7092.04 | 7 | 6 |
|
| 235 |
Motif group HL_80008.1
Basepair signature:
|
0.00 | -7103.00 | 7 | 6 |
|
| 236 |
Motif group HL_72628.1
Basepair signature:
|
0.00 | -7158.59 | 7 | 6 |
|
| 237 |
Motif group HL_20781.1
Basepair signature:
|
0.00 | -7372.13 | 9 | 7 |
|
| 238 |
Motif group HL_38808.1
Basepair signature:
|
0.00 | -7574.94 | 6 | 5 |
|
| 239 |
Motif group HL_80241.1
Basepair signature:
|
0.00 | -7699.71 | 6 | 5 |
|
| 240 |
Motif group HL_42998.2
Basepair signature:
|
0.00 | -7754.26 | 4 | 4 |
|
| 241 |
Motif group HL_22622.1
Basepair signature:
|
0.00 | -8408.84 | 4 | 3 |
|
| 242 |
Motif group HL_09452.1
Basepair signature:
|
0.00 | -8420.65 | 3 | 3 |
|
| 243 |
Motif group HL_58539.1
Basepair signature:
|
0.00 | -8572.72 | 12 | 11 |
|
| 244 |
Motif group HL_97983.1
Basepair signature:
|
0.00 | -8687.03 | 7 | 5 |
|
| 245 |
Motif group HL_67667.2
Basepair signature:
|
0.00 | -9228.53 | 5 | 4 |
|
| 246 |
Motif group HL_78197.1
Basepair signature:
|
0.00 | -9761.38 | 4 | 4 |
|
| 247 |
Motif group HL_07951.3
Basepair signature:
|
0.00 | -9999.00 | 6 | 4 |
tRNA D-loop |
| 248 |
Motif group HL_09260.2
Basepair signature:
|
0.00 | -9999.00 | 7 | 6 |
tRNA D-loop |
| 249 |
Motif group HL_28791.1
Basepair signature:
|
0.00 | -9999.00 | 4 | 3 |
|
| 250 |
Motif group HL_39243.1
Basepair signature:
|
0.00 | -9999.00 | 4 | 4 |
|
| 251 |
Motif group HL_52953.3
Basepair signature:
|
0.00 | -9999.00 | 2 | 2 |
|
| 252 |
Motif group HL_65794.5
Basepair signature:
|
0.00 | -9999.00 | 2 | 2 |
Pseudoknot geometry |
| 253 |
Motif group HL_93324.4
Basepair signature:
|
0.00 | -9999.00 | 3 | 3 |
Pseudoknot geometry |