JAR3D
Query RF00210-CCF-3.98 completed
Run on Motif Atlas Version
using the Rfam secondary structure. Run with the CaCoFold secondary structure.
Rfam family RF00210 maps to these 3 chains: 2NBX|1|A, 8HUJ|1|C, 8J7R|1|C See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.
Loop 36 Hairpin loop
Column numbers: 530-537 - This loop does not map to nucleotides in a 3D structure with xyz coordinates.
Scored sequences and counts
GGAGG-CC 82
GGAGG-UC 4
GGUGGGCC 2
GGAGG-CA 1
GGGGA-UC 1
GGAG--CC 1
---GG-AU 1
Click on headings to reorder table
| # | Matching motif group | Acceptance Rate | Mean Cutoff Score | Full Edit Distance | Interior Edit Distance | Basepair Diagram and most common annotation |
|---|---|---|---|---|---|---|
| 1 |
Motif group HL_97917.2
Basepair signature:
|
96.74 | 51.40 | 1 | 1 |
|
| 2 |
Motif group HL_51447.1
Basepair signature:
|
94.57 | -115.59 | 3 | 1 |
|
| 3 |
Motif group HL_89893.1
Basepair signature:
|
90.22 | 8.40 | 4 | 2 |
|
| 4 |
Motif group HL_22622.1
Basepair signature:
|
6.52 | -115.21 | 5 | 3 |
|
| 5 |
Motif group HL_59843.1
Basepair signature:
|
5.43 | -31.75 | 4 | 2 |
|
| 6 |
Motif group HL_57863.1
Basepair signature:
|
4.35 | -18.93 | 3 | 3 |
G-quadruplex fragment |
| 7 |
Motif group HL_57176.2
Basepair signature:
|
4.35 | -153.20 | 3 | 3 |
Pseudoknot geometry with 3' bulge |
| 8 |
Motif group HL_56334.1
Basepair signature:
|
2.17 | -73.40 | 2 | 2 |
Mini UNCG |
| 9 |
Motif group HL_31585.4
Basepair signature:
|
2.17 | -137.17 | 2 | 2 |
Purine riboswitch |
| 10 |
Motif group HL_25061.1
Basepair signature:
|
2.17 | -151.14 | 5 | 4 |
|
| 11 |
Motif group HL_09452.1
Basepair signature:
|
2.17 | -212.32 | 4 | 3 |
|
| 12 |
Motif group HL_78197.1
Basepair signature:
|
2.17 | -238.28 | 2 | 2 |
|
| 13 |
Motif group HL_86769.4
Basepair signature:
|
1.09 | -7.24 | 5 | 3 |
|
| 14 |
Motif group HL_93535.1
Basepair signature:
|
1.09 | -8.70 | 4 | 2 |
|
| 15 |
Motif group HL_07886.3
Basepair signature:
|
1.09 | -19.16 | 4 | 2 |
|
| 16 |
Motif group HL_53890.2
Basepair signature:
|
1.09 | -23.09 | 4 | 2 |
|
| 17 |
Motif group HL_80922.2
Basepair signature:
|
1.09 | -36.41 | 4 | 3 |
|
| 18 |
Motif group HL_65794.5
Basepair signature:
|
1.09 | -36.94 | 3 | 2 |
Pseudoknot geometry |
| 19 |
Motif group HL_13963.3
Basepair signature:
|
1.09 | -38.88 | 3 | 3 |
|
| 20 |
Motif group HL_04783.2
Basepair signature:
|
1.09 | -43.25 | 3 | 2 |
|
| 21 |
Motif group HL_52953.3
Basepair signature:
|
1.09 | -53.71 | 3 | 2 |
|
| 22 |
Motif group HL_50318.1
Basepair signature:
|
1.09 | -56.23 | 7 | 5 |
|
| 23 |
Motif group HL_10540.1
Basepair signature:
|
1.09 | -71.81 | 5 | 3 |
|
| 24 |
Motif group HL_13189.1
Basepair signature:
|
1.09 | -73.63 | 6 | 4 |
|
| 25 |
Motif group HL_56131.2
Basepair signature:
|
1.09 | -76.72 | 4 | 3 |
|
| 26 |
Motif group HL_28791.1
Basepair signature:
|
1.09 | -81.27 | 5 | 3 |
|
| 27 |
Motif group HL_70782.2
Basepair signature:
|
1.09 | -81.92 | 3 | 3 |
|
| 28 |
Motif group HL_01609.3
Basepair signature:
|
1.09 | -90.72 | 5 | 3 |
T-loop with 2 bulged bases not stacked |
| 29 |
Motif group HL_77436.5
Basepair signature:
|
1.09 | -100.90 | 4 | 4 |
T-loop related |
| 30 |
Motif group HL_32346.4
Basepair signature:
|
1.09 | -132.48 | 4 | 3 |
|
| 31 |
Motif group HL_48778.2
Basepair signature:
|
1.09 | -149.17 | 3 | 3 |
Mini UNCG |
| 32 |
Motif group HL_78677.1
Basepair signature:
|
1.09 | -149.95 | 4 | 4 |
|
| 33 |
Motif group HL_81100.2
Basepair signature:
|
1.09 | -182.57 | 4 | 3 |
|
| 34 |
Motif group HL_85993.1
Basepair signature:
|
1.09 | -257.54 | 6 | 5 |
|
| 35 |
Motif group HL_99748.1
Basepair signature:
|
0.00 | -33.20 | 6 | 4 |
Other HL |
| 36 |
Motif group HL_48417.5
Basepair signature:
|
0.00 | -36.70 | 4 | 2 |
|
| 37 |
Motif group HL_37344.1
Basepair signature:
|
0.00 | -37.38 | 6 | 4 |
|
| 38 |
Motif group HL_47854.1
Basepair signature:
|
0.00 | -39.91 | 3 | 3 |
|
| 39 |
Motif group HL_89567.2
Basepair signature:
|
0.00 | -43.50 | 5 | 3 |
|
| 40 |
Motif group HL_75660.5
Basepair signature:
|
0.00 | -44.21 | 2 | 2 |
|
| 41 |
Motif group HL_50537.6
Basepair signature:
|
0.00 | -44.93 | 6 | 4 |
tRNA anticodon loop with synthetase |
| 42 |
Motif group HL_86012.1
Basepair signature:
|
0.00 | -46.78 | 5 | 5 |
T-loop with unstacked turn |
| 43 |
Motif group HL_50006.2
Basepair signature:
|
0.00 | -51.04 | 3 | 3 |
|
| 44 |
Motif group HL_66103.1
Basepair signature:
|
0.00 | -56.48 | 6 | 4 |
|
| 45 |
Motif group HL_47787.2
Basepair signature:
|
0.00 | -59.08 | 4 | 3 |
|
| 46 |
Motif group HL_39243.1
Basepair signature:
|
0.00 | -61.27 | 4 | 4 |
|
| 47 |
Motif group HL_57875.1
Basepair signature:
|
0.00 | -61.89 | 3 | 3 |
|
| 48 |
Motif group HL_87553.1
Basepair signature:
|
0.00 | -64.47 | 4 | 4 |
|
| 49 |
Motif group HL_37824.7
Basepair signature:
|
0.00 | -64.94 | 2 | 2 |
GNRA |
| 50 |
Motif group HL_28075.1
Basepair signature:
|
0.00 | -68.02 | 6 | 4 |
|
| 51 |
Motif group HL_18565.1
Basepair signature:
|
0.00 | -68.69 | 6 | 4 |
|
| 52 |
Motif group HL_20167.2
Basepair signature:
|
0.00 | -70.07 | 4 | 4 |
|
| 53 |
Motif group HL_69752.2
Basepair signature:
|
0.00 | -71.18 | 5 | 3 |
|
| 54 |
Motif group HL_13529.1
Basepair signature:
|
0.00 | -71.55 | 6 | 4 |
|
| 55 |
Motif group HL_28252.8
Basepair signature:
|
0.00 | -74.63 | 3 | 3 |
T-loop with 2 stacked bulged bases |
| 56 |
Motif group HL_87954.2
Basepair signature:
|
0.00 | -75.50 | 4 | 3 |
|
| 57 |
Motif group HL_42046.2
Basepair signature:
|
0.00 | -75.99 | 5 | 3 |
|
| 58 |
Motif group HL_61996.2
Basepair signature:
|
0.00 | -76.13 | 4 | 4 |
|
| 59 |
Motif group HL_38168.1
Basepair signature:
|
0.00 | -76.85 | 5 | 4 |
|
| 60 |
Motif group HL_93438.2
Basepair signature:
|
0.00 | -78.40 | 6 | 4 |
|
| 61 |
Motif group HL_02887.3
Basepair signature:
|
0.00 | -78.67 | 6 | 5 |
T-loop with 3 stacked bulged bases |
| 62 |
Motif group HL_04642.1
Basepair signature:
|
0.00 | -79.43 | 7 | 5 |
tRNA D-loop |
| 63 |
Motif group HL_82710.2
Basepair signature:
|
0.00 | -79.92 | 3 | 3 |
|
| 64 |
Motif group HL_20743.5
Basepair signature:
|
0.00 | -80.70 | 4 | 4 |
|
| 65 |
Motif group HL_22584.6
Basepair signature:
|
0.00 | -82.61 | 3 | 2 |
Fab BL3-6 binding hairpin with tSW |
| 66 |
Motif group HL_98864.1
Basepair signature:
|
0.00 | -83.68 | 5 | 5 |
T-loop with unstacked turn |
| 67 |
Motif group HL_26934.1
Basepair signature:
|
0.00 | -85.97 | 5 | 5 |
|
| 68 |
Motif group HL_66853.7
Basepair signature:
|
0.00 | -86.85 | 6 | 4 |
|
| 69 |
Motif group HL_45175.1
Basepair signature:
|
0.00 | -87.25 | 6 | 4 |
tRNA D-loop |
| 70 |
Motif group HL_83808.4
Basepair signature:
|
0.00 | -87.90 | 7 | 5 |
Pseudoknot |
| 71 |
Motif group HL_08100.1
Basepair signature:
|
0.00 | -88.33 | 5 | 3 |
|
| 72 |
Motif group HL_50860.2
Basepair signature:
|
0.00 | -90.81 | 4 | 4 |
|
| 73 |
Motif group HL_62934.1
Basepair signature:
|
0.00 | -90.95 | 5 | 3 |
|
| 74 |
Motif group HL_20811.4
Basepair signature:
|
0.00 | -91.92 | 5 | 4 |
tRNA D-loop |
| 75 |
Motif group HL_49922.4
Basepair signature:
|
0.00 | -92.92 | 3 | 3 |
|
| 76 |
Motif group HL_20535.2
Basepair signature:
|
0.00 | -95.91 | 5 | 5 |
|
| 77 |
Motif group HL_30068.2
Basepair signature:
|
0.00 | -100.70 | 3 | 3 |
|
| 78 |
Motif group HL_38901.2
Basepair signature:
|
0.00 | -101.16 | 3 | 3 |
tRNA D-loop |
| 79 |
Motif group HL_81538.2
Basepair signature:
|
0.00 | -101.42 | 2 | 2 |
GNRA with tandem sheared |
| 80 |
Motif group HL_04259.3
Basepair signature:
|
0.00 | -103.24 | 3 | 3 |
GNRA with extra cWW |
| 81 |
Motif group HL_71391.1
Basepair signature:
|
0.00 | -105.58 | 3 | 3 |
|
| 82 |
Motif group HL_04641.1
Basepair signature:
|
0.00 | -106.42 | 6 | 4 |
|
| 83 |
Motif group HL_41543.1
Basepair signature:
|
0.00 | -106.79 | 6 | 6 |
|
| 84 |
Motif group HL_86870.2
Basepair signature:
|
0.00 | -107.49 | 4 | 4 |
|
| 85 |
Motif group HL_41464.2
Basepair signature:
|
0.00 | -108.44 | 5 | 5 |
|
| 86 |
Motif group HL_29129.3
Basepair signature:
|
0.00 | -111.70 | 5 | 5 |
|
| 87 |
Motif group HL_60914.1
Basepair signature:
|
0.00 | -113.83 | 5 | 3 |
|
| 88 |
Motif group HL_04171.7
Basepair signature:
|
0.00 | -115.03 | 7 | 5 |
|
| 89 |
Motif group HL_49941.1
Basepair signature:
|
0.00 | -116.02 | 7 | 5 |
tRNA D-loop |
| 90 |
Motif group HL_58224.1
Basepair signature:
|
0.00 | -118.79 | 7 | 5 |
|
| 91 |
Motif group HL_21372.1
Basepair signature:
|
0.00 | -119.36 | 7 | 5 |
|
| 92 |
Motif group HL_99040.1
Basepair signature:
|
0.00 | -119.98 | 5 | 4 |
|
| 93 |
Motif group HL_41902.1
Basepair signature:
|
0.00 | -120.31 | 7 | 6 |
|
| 94 |
Motif group HL_16991.1
Basepair signature:
|
0.00 | -122.08 | 7 | 6 |
G-quadruplex fragment |
| 95 |
Motif group HL_15802.1
Basepair signature:
|
0.00 | -123.22 | 7 | 5 |
|
| 96 |
Motif group HL_78347.4
Basepair signature:
|
0.00 | -124.58 | 4 | 4 |
|
| 97 |
Motif group HL_84299.4
Basepair signature:
|
0.00 | -124.69 | 4 | 4 |
|
| 98 |
Motif group HL_81545.2
Basepair signature:
|
0.00 | -124.85 | 6 | 6 |
|
| 99 |
Motif group HL_27670.2
Basepair signature:
|
0.00 | -124.98 | 3 | 3 |
T-loop with unstacked turn |
| 100 |
Motif group HL_36335.1
Basepair signature:
|
0.00 | -125.64 | 7 | 5 |
|
| 101 |
Motif group HL_43517.1
Basepair signature:
|
0.00 | -126.23 | 5 | 4 |
|
| 102 |
Motif group HL_85434.1
Basepair signature:
|
0.00 | -131.34 | 5 | 5 |
|
| 103 |
Motif group HL_27483.1
Basepair signature:
|
0.00 | -132.78 | 5 | 4 |
|
| 104 |
Motif group HL_74379.3
Basepair signature:
|
0.00 | -134.88 | 6 | 6 |
|
| 105 |
Motif group HL_68257.1
Basepair signature:
|
0.00 | -135.47 | 7 | 6 |
|
| 106 |
Motif group HL_35941.1
Basepair signature:
|
0.00 | -139.19 | 5 | 4 |
|
| 107 |
Motif group HL_46501.1
Basepair signature:
|
0.00 | -141.08 | 5 | 4 |
|
| 108 |
Motif group HL_67079.1
Basepair signature:
|
0.00 | -143.36 | 6 | 6 |
|
| 109 |
Motif group HL_32392.1
Basepair signature:
|
0.00 | -145.69 | 6 | 4 |
|
| 110 |
Motif group HL_64690.6
Basepair signature:
|
0.00 | -147.33 | 4 | 4 |
|
| 111 |
Motif group HL_18423.1
Basepair signature:
|
0.00 | -148.28 | 8 | 6 |
|
| 112 |
Motif group HL_33983.1
Basepair signature:
|
0.00 | -148.44 | 7 | 5 |
|
| 113 |
Motif group HL_75293.5
Basepair signature:
|
0.00 | -148.49 | 6 | 6 |
|
| 114 |
Motif group HL_56676.1
Basepair signature:
|
0.00 | -148.89 | 5 | 4 |
|
| 115 |
Motif group HL_86109.1
Basepair signature:
|
0.00 | -150.36 | 7 | 7 |
|
| 116 |
Motif group HL_34617.5
Basepair signature:
|
0.00 | -150.53 | 3 | 3 |
UNCG |
| 117 |
Motif group HL_77082.1
Basepair signature:
|
0.00 | -151.93 | 5 | 4 |
Pseudoknot geometry |
| 118 |
Motif group HL_55195.3
Basepair signature:
|
0.00 | -152.08 | 4 | 3 |
|
| 119 |
Motif group HL_18978.1
Basepair signature:
|
0.00 | -157.68 | 7 | 5 |
|
| 120 |
Motif group HL_60266.1
Basepair signature:
|
0.00 | -158.51 | 6 | 6 |
|
| 121 |
Motif group HL_72628.1
Basepair signature:
|
0.00 | -158.52 | 7 | 5 |
|
| 122 |
Motif group HL_70658.1
Basepair signature:
|
0.00 | -159.20 | 8 | 7 |
|
| 123 |
Motif group HL_37369.2
Basepair signature:
|
0.00 | -159.86 | 5 | 3 |
|
| 124 |
Motif group HL_87463.1
Basepair signature:
|
0.00 | -162.16 | 6 | 6 |
|
| 125 |
Motif group HL_85367.2
Basepair signature:
|
0.00 | -164.33 | 5 | 3 |
|
| 126 |
Motif group HL_40252.4
Basepair signature:
|
0.00 | -164.63 | 7 | 6 |
|
| 127 |
Motif group HL_98252.1
Basepair signature:
|
0.00 | -166.23 | 10 | 8 |
|
| 128 |
Motif group HL_67667.2
Basepair signature:
|
0.00 | -166.40 | 6 | 4 |
|
| 129 |
Motif group HL_97733.1
Basepair signature:
|
0.00 | -167.61 | 7 | 5 |
|
| 130 |
Motif group HL_89881.5
Basepair signature:
|
0.00 | -167.64 | 6 | 6 |
|
| 131 |
Motif group HL_25847.2
Basepair signature:
|
0.00 | -168.12 | 7 | 7 |
|
| 132 |
Motif group HL_10453.3
Basepair signature:
|
0.00 | -169.03 | 4 | 4 |
tRNA anticodon loop |
| 133 |
Motif group HL_06226.4
Basepair signature:
|
0.00 | -173.82 | 7 | 6 |
|
| 134 |
Motif group HL_23509.1
Basepair signature:
|
0.00 | -173.83 | 8 | 8 |
|
| 135 |
Motif group HL_38046.1
Basepair signature:
|
0.00 | -175.70 | 6 | 5 |
|
| 136 |
Motif group HL_90620.1
Basepair signature:
|
0.00 | -177.72 | 9 | 7 |
|
| 137 |
Motif group HL_93616.2
Basepair signature:
|
0.00 | -181.52 | 7 | 5 |
tRNA D-loop |
| 138 |
Motif group HL_73266.9
Basepair signature:
|
0.00 | -182.11 | 7 | 6 |
|
| 139 |
Motif group HL_53504.3
Basepair signature:
|
0.00 | -182.54 | 5 | 5 |
|
| 140 |
Motif group HL_01962.2
Basepair signature:
|
0.00 | -183.11 | 8 | 6 |
|
| 141 |
Motif group HL_81205.3
Basepair signature:
|
0.00 | -185.08 | 9 | 8 |
|
| 142 |
Motif group HL_80008.1
Basepair signature:
|
0.00 | -185.34 | 8 | 6 |
|
| 143 |
Motif group HL_59330.1
Basepair signature:
|
0.00 | -185.97 | 6 | 4 |
|
| 144 |
Motif group HL_00914.1
Basepair signature:
|
0.00 | -186.81 | 5 | 5 |
|
| 145 |
Motif group HL_53454.2
Basepair signature:
|
0.00 | -187.14 | 6 | 4 |
|
| 146 |
Motif group HL_80599.2
Basepair signature:
|
0.00 | -188.40 | 6 | 4 |
|
| 147 |
Motif group HL_23010.1
Basepair signature:
|
0.00 | -189.88 | 8 | 6 |
|
| 148 |
Motif group HL_02483.1
Basepair signature:
|
0.00 | -190.42 | 9 | 7 |
|
| 149 |
Motif group HL_13971.1
Basepair signature:
|
0.00 | -190.84 | 11 | 9 |
|
| 150 |
Motif group HL_99769.3
Basepair signature:
|
0.00 | -191.69 | 6 | 6 |
|
| 151 |
Motif group HL_07583.1
Basepair signature:
|
0.00 | -191.90 | 9 | 8 |
|
| 152 |
Motif group HL_15574.1
Basepair signature:
|
0.00 | -195.81 | 4 | 4 |
|
| 153 |
Motif group HL_25967.2
Basepair signature:
|
0.00 | -197.59 | 5 | 5 |
|
| 154 |
Motif group HL_91939.2
Basepair signature:
|
0.00 | -200.09 | 9 | 7 |
|
| 155 |
Motif group HL_38808.1
Basepair signature:
|
0.00 | -205.80 | 7 | 5 |
|
| 156 |
Motif group HL_22135.1
Basepair signature:
|
0.00 | -210.27 | 7 | 5 |
|
| 157 |
Motif group HL_68767.1
Basepair signature:
|
0.00 | -210.73 | 7 | 7 |
tRNA D-loop |
| 158 |
Motif group HL_02817.2
Basepair signature:
|
0.00 | -212.38 | 5 | 5 |
|
| 159 |
Motif group HL_73247.1
Basepair signature:
|
0.00 | -214.37 | 10 | 8 |
Pseudoknot geometry |
| 160 |
Motif group HL_45785.1
Basepair signature:
|
0.00 | -214.66 | 8 | 8 |
|
| 161 |
Motif group HL_84847.1
Basepair signature:
|
0.00 | -217.11 | 9 | 9 |
|
| 162 |
Motif group HL_74055.2
Basepair signature:
|
0.00 | -218.90 | 10 | 9 |
|
| 163 |
Motif group HL_29966.1
Basepair signature:
|
0.00 | -226.11 | 6 | 4 |
|
| 164 |
Motif group HL_35677.3
Basepair signature:
|
0.00 | -230.41 | 6 | 4 |
|
| 165 |
Motif group HL_05304.3
Basepair signature:
|
0.00 | -230.64 | 7 | 7 |
|
| 166 |
Motif group HL_11542.1
Basepair signature:
|
0.00 | -231.88 | 7 | 6 |
|
| 167 |
Motif group HL_23115.1
Basepair signature:
|
0.00 | -233.11 | 7 | 6 |
tRNA D-loop |
| 168 |
Motif group HL_80362.1
Basepair signature:
|
0.00 | -238.27 | 7 | 5 |
|
| 169 |
Motif group HL_29762.1
Basepair signature:
|
0.00 | -240.89 | 8 | 6 |
|
| 170 |
Motif group HL_89199.2
Basepair signature:
|
0.00 | -243.01 | 5 | 4 |
Mini UNCG |
| 171 |
Motif group HL_08602.1
Basepair signature:
|
0.00 | -244.54 | 9 | 8 |
|
| 172 |
Motif group HL_83632.1
Basepair signature:
|
0.00 | -246.29 | 6 | 5 |
tRNA anticodon loop |
| 173 |
Motif group HL_06059.6
Basepair signature:
|
0.00 | -246.29 | 5 | 3 |
tRNA anticodon loop |
| 174 |
Motif group HL_80411.1
Basepair signature:
|
0.00 | -246.85 | 8 | 6 |
tRNA D-loop |
| 175 |
Motif group HL_93135.1
Basepair signature:
|
0.00 | -251.69 | 7 | 5 |
Pseudoknot |
| 176 |
Motif group HL_73255.1
Basepair signature:
|
0.00 | -251.88 | 7 | 5 |
|
| 177 |
Motif group HL_86883.1
Basepair signature:
|
0.00 | -255.75 | 4 | 4 |
|
| 178 |
Motif group HL_80709.3
Basepair signature:
|
0.00 | -258.76 | 3 | 3 |
|
| 179 |
Motif group HL_98870.1
Basepair signature:
|
0.00 | -259.34 | 10 | 9 |
|
| 180 |
Motif group HL_65313.1
Basepair signature:
|
0.00 | -266.43 | 7 | 5 |
|
| 181 |
Motif group HL_91503.7
Basepair signature:
|
0.00 | -266.64 | 6 | 6 |
|
| 182 |
Motif group HL_32735.2
Basepair signature:
|
0.00 | -267.21 | 7 | 5 |
|
| 183 |
Motif group HL_94980.1
Basepair signature:
|
0.00 | -267.27 | 6 | 5 |
|
| 184 |
Motif group HL_02581.1
Basepair signature:
|
0.00 | -268.00 | 10 | 8 |
tRNA D-loop |
| 185 |
Motif group HL_30680.3
Basepair signature:
|
0.00 | -268.49 | 3 | 3 |
Pseudoknot geometry |
| 186 |
Motif group HL_26631.1
Basepair signature:
|
0.00 | -271.76 | 5 | 3 |
|
| 187 |
Motif group HL_07480.2
Basepair signature:
|
0.00 | -280.50 | 8 | 6 |
|
| 188 |
Motif group HL_59735.5
Basepair signature:
|
0.00 | -284.28 | 5 | 3 |
|
| 189 |
Motif group HL_20751.2
Basepair signature:
|
0.00 | -292.01 | 8 | 7 |
|
| 190 |
Motif group HL_97756.2
Basepair signature:
|
0.00 | -294.30 | 11 | 9 |
|
| 191 |
Motif group HL_91641.1
Basepair signature:
|
0.00 | -295.92 | 13 | 12 |
|
| 192 |
Motif group HL_69139.1
Basepair signature:
|
0.00 | -296.31 | 9 | 7 |
|
| 193 |
Motif group HL_14757.1
Basepair signature:
|
0.00 | -298.67 | 14 | 13 |
|
| 194 |
Motif group HL_88558.1
Basepair signature:
|
0.00 | -301.50 | 8 | 7 |
|
| 195 |
Motif group HL_34964.1
Basepair signature:
|
0.00 | -302.92 | 6 | 4 |
|
| 196 |
Motif group HL_93324.4
Basepair signature:
|
0.00 | -324.92 | 3 | 3 |
Pseudoknot geometry |
| 197 |
Motif group HL_66482.1
Basepair signature:
|
0.00 | -353.09 | 13 | 11 |
|
| 198 |
Motif group HL_50779.4
Basepair signature:
|
0.00 | -358.78 | 5 | 5 |
|
| 199 |
Motif group HL_10456.1
Basepair signature:
|
0.00 | -358.97 | 12 | 11 |
|
| 200 |
Motif group HL_51921.1
Basepair signature:
|
0.00 | -362.34 | 15 | 14 |
|
| 201 |
Motif group HL_80241.1
Basepair signature:
|
0.00 | -427.00 | 5 | 4 |
|
| 202 |
Motif group HL_92488.1
Basepair signature:
|
0.00 | -457.47 | 11 | 11 |
|
| 203 |
Motif group HL_88205.2
Basepair signature:
|
0.00 | -468.03 | 4 | 4 |
|
| 204 |
Motif group HL_93383.1
Basepair signature:
|
0.00 | -474.51 | 6 | 6 |
|
| 205 |
Motif group HL_76094.1
Basepair signature:
|
0.00 | -515.66 | 5 | 4 |
|
| 206 |
Motif group HL_12870.1
Basepair signature:
|
0.00 | -804.02 | 9 | 9 |
|
| 207 |
Motif group HL_33074.4
Basepair signature:
|
0.00 | -3929.60 | 8 | 7 |
U1 small nuclear ribonucleoprotein A binding hairpin |
| 208 |
Motif group HL_89346.1
Basepair signature:
|
0.00 | -3995.05 | 14 | 13 |
|
| 209 |
Motif group HL_99324.1
Basepair signature:
|
0.00 | -4003.90 | 13 | 11 |
|
| 210 |
Motif group HL_85461.1
Basepair signature:
|
0.00 | -4008.37 | 13 | 13 |
|
| 211 |
Motif group HL_60293.1
Basepair signature:
|
0.00 | -4043.39 | 16 | 15 |
G-quadruplex |
| 212 |
Motif group HL_21400.1
Basepair signature:
|
0.00 | -4049.83 | 18 | 17 |
G-quadruplex |
| 213 |
Motif group HL_35354.1
Basepair signature:
|
0.00 | -4062.90 | 19 | 18 |
|
| 214 |
Motif group HL_00317.1
Basepair signature:
|
0.00 | -4070.31 | 17 | 16 |
|
| 215 |
Motif group HL_12758.3
Basepair signature:
|
0.00 | -4073.18 | 19 | 18 |
G-quadruplex |
| 216 |
Motif group HL_59564.1
Basepair signature:
|
0.00 | -4110.57 | 17 | 16 |
|
| 217 |
Motif group HL_50851.1
Basepair signature:
|
0.00 | -4432.78 | 8 | 7 |
G-quadruplex fragment |
| 218 |
Motif group HL_73916.1
Basepair signature:
|
0.00 | -4636.49 | 33 | 33 |
|
| 219 |
Motif group HL_04725.1
Basepair signature:
|
0.00 | -4783.28 | 8 | 8 |
|
| 220 |
Motif group HL_07903.1
Basepair signature:
|
0.00 | -4955.65 | 9 | 9 |
|
| 221 |
Motif group HL_73183.1
Basepair signature:
|
0.00 | -4973.51 | 10 | 8 |
Pseudoknot geometry with G-bulge |
| 222 |
Motif group HL_31581.6
Basepair signature:
|
0.00 | -4979.98 | 8 | 7 |
|
| 223 |
Motif group HL_63355.1
Basepair signature:
|
0.00 | -5002.26 | 7 | 7 |
|
| 224 |
Motif group HL_67407.5
Basepair signature:
|
0.00 | -5006.30 | 4 | 4 |
|
| 225 |
Motif group HL_88364.2
Basepair signature:
|
0.00 | -5012.96 | 11 | 9 |
|
| 226 |
Motif group HL_81312.1
Basepair signature:
|
0.00 | -5280.00 | 10 | 8 |
|
| 227 |
Motif group HL_19210.3
Basepair signature:
|
0.00 | -5287.89 | 5 | 5 |
|
| 228 |
Motif group HL_15118.1
Basepair signature:
|
0.00 | -5326.00 | 8 | 7 |
|
| 229 |
Motif group HL_94376.1
Basepair signature:
|
0.00 | -5384.30 | 5 | 5 |
Pseudoknot geometry |
| 230 |
Motif group HL_55305.1
Basepair signature:
|
0.00 | -5427.93 | 8 | 7 |
|
| 231 |
Motif group HL_70751.1
Basepair signature:
|
0.00 | -5555.04 | 9 | 7 |
|
| 232 |
Motif group HL_01255.1
Basepair signature:
|
0.00 | -5595.85 | 10 | 8 |
|
| 233 |
Motif group HL_08510.1
Basepair signature:
|
0.00 | -5668.50 | 7 | 5 |
|
| 234 |
Motif group HL_36684.4
Basepair signature:
|
0.00 | -5684.91 | 5 | 5 |
|
| 235 |
Motif group HL_78284.1
Basepair signature:
|
0.00 | -5721.45 | 8 | 6 |
|
| 236 |
Motif group HL_38649.1
Basepair signature:
|
0.00 | -5783.77 | 6 | 6 |
|
| 237 |
Motif group HL_16398.2
Basepair signature:
|
0.00 | -5786.54 | 7 | 7 |
|
| 238 |
Motif group HL_50418.1
Basepair signature:
|
0.00 | -5787.29 | 4 | 4 |
|
| 239 |
Motif group HL_24792.1
Basepair signature:
|
0.00 | -5849.28 | 7 | 7 |
|
| 240 |
Motif group HL_68572.1
Basepair signature:
|
0.00 | -5905.88 | 8 | 7 |
|
| 241 |
Motif group HL_74292.1
Basepair signature:
|
0.00 | -5927.86 | 5 | 5 |
|
| 242 |
Motif group HL_55436.1
Basepair signature:
|
0.00 | -6009.72 | 5 | 3 |
|
| 243 |
Motif group HL_47732.1
Basepair signature:
|
0.00 | -6012.99 | 10 | 8 |
|
| 244 |
Motif group HL_64292.1
Basepair signature:
|
0.00 | -6039.22 | 10 | 9 |
|
| 245 |
Motif group HL_29958.1
Basepair signature:
|
0.00 | -6213.93 | 9 | 8 |
|
| 246 |
Motif group HL_99867.1
Basepair signature:
|
0.00 | -6577.07 | 4 | 4 |
|
| 247 |
Motif group HL_20781.1
Basepair signature:
|
0.00 | -7215.70 | 9 | 7 |
|
| 248 |
Motif group HL_42998.2
Basepair signature:
|
0.00 | -7643.53 | 3 | 3 |
|
| 249 |
Motif group HL_58539.1
Basepair signature:
|
0.00 | -8201.91 | 11 | 10 |
|
| 250 |
Motif group HL_97983.1
Basepair signature:
|
0.00 | -8267.98 | 6 | 5 |
|
| 251 |
Motif group HL_77600.2
Basepair signature:
|
0.00 | -9616.98 | 3 | 3 |
|
| 252 |
Motif group HL_07951.3
Basepair signature:
|
0.00 | -9999.00 | 6 | 4 |
tRNA D-loop |
| 253 |
Motif group HL_09260.2
Basepair signature:
|
0.00 | -9999.00 | 7 | 5 |
tRNA D-loop |