JAR3D on RF03072

Rfam family RF03072 maps to these 6 chains: 9CXF|1|A, 9E73|1|A, 9E74|1|A, 9E75|1|A, 9ELY|1|A, 9G7C|1|A See more about them at RNA 3D Hub by filtering on the chain or the Rfam family.

Loop 5 Hairpin loop

Column numbers: 154-280 - View nucleotides in PDB file(s)

    Scored sequences and counts

    
    G--------------------------UGCG-----------------------------------------------------------------------------------------------C   52

    
    ---------------------------CAAAGC----------------------------------------------------------------------------------------------   39

    
    ---------------------------AAAAU-----------------------------------------------------------------------------------------------   36

    
    ---------------------------CAAAGU----------------------------------------------------------------------------------------------   32

    
    ---------------------------AAAA------------------------------------------------------------------------------------------------   30

    
    ---------------------------AAA-------------------------------------------------------------------------------------------------   28

    
    ---------------------------AAAAG-----------------------------------------------------------------------------------------------   11

    
    ---------------------------AAG-------------------------------------------------------------------------------------------------   10

    
    ---------------------------UAAAAAUU--------------------------------------------------------------------------------------------    8

    
    A--------------------------AAA------------------------------------------------------------------------------------------------U    8

    
    G--------------------------UGUG-----------------------------------------------------------------------------------------------C    7

    
    G--------------------------CAAGG----------------------------------------------------------------------------------------------C    6

    
    ---------------------------AAGAG-----------------------------------------------------------------------------------------------    6

    
    ---------------------------UUCUC-----------------------------------------------------------------------------------------------    6

    
    ---------------------------AAAU------------------------------------------------------------------------------------------------    6

    
    ---------------------------AAUU------------------------------------------------------------------------------------------------    6

    
    ---------------------------AAAG------------------------------------------------------------------------------------------------    5

    
    ---------------------------UAGA------------------------------------------------------------------------------------------------    5

    
    UA-------------------------AAAAU---------------------------------------------------------------------------------------------UG    4

    
    ---------------------------UAAGA-----------------------------------------------------------------------------------------------    4

    
    G--------------------------UCU------------------------------------------------------------------------------------------------C    4

    
    UGUA-----------------------AAGA--------------------------------------------------------------------------------------------UGCA    3

    
    G--------------------------CAGGAGAU-------------------------------------------------------------------------------------------C    3

    
    UA-------------------------AAAA----------------------------------------------------------------------------------------------UG    3

    
    GC-------------------------AGG-----------------------------------------------------------------------------------------------GC    3

    
    ---------------------------AAAAGC----------------------------------------------------------------------------------------------    3

    
    G--------------------------GAGA-----------------------------------------------------------------------------------------------C    3

    
    G--------------------------UGAG-----------------------------------------------------------------------------------------------C    3

    
    ---------------------------AAAGU-----------------------------------------------------------------------------------------------    3

    
    ---------------------------AAAUU-----------------------------------------------------------------------------------------------    3

    
    ---------------------------GAGAA-----------------------------------------------------------------------------------------------    3

    
    ---------------------------UAAAG-----------------------------------------------------------------------------------------------    3

    
    ---------------------------UUUUC-----------------------------------------------------------------------------------------------    3

    
    ---------------------------UUCG------------------------------------------------------------------------------------------------    3

    
    ---------------------------UUUG------------------------------------------------------------------------------------------------    3

    
    ---------------------------AAU-------------------------------------------------------------------------------------------------    3

    
    ---------------------------UUU-------------------------------------------------------------------------------------------------    3

    
    ---------------------------GAAGAAGAGUA-----------------------------------------------------------------------------------------    2

    
    ---------------------------ACAAAGAG--------------------------------------------------------------------------------------------    2

    
    C--------------------------AAGAG----------------------------------------------------------------------------------------------G    2

    
    C--------------------------AGGAA----------------------------------------------------------------------------------------------G    2

    
    GC-------------------------AUU-----------------------------------------------------------------------------------------------GC    2

    
    ---------------------------AAAAAC----------------------------------------------------------------------------------------------    2

    
    ---------------------------AGUAUU----------------------------------------------------------------------------------------------    2

    
    ---------------------------CAAAGA----------------------------------------------------------------------------------------------    2

    
    A--------------------------AAAA-----------------------------------------------------------------------------------------------U    2

    
    G--------------------------GCAA-----------------------------------------------------------------------------------------------C    2

    
    G--------------------------UGGG-----------------------------------------------------------------------------------------------C    2

    
    ---------------------------AAAAA-----------------------------------------------------------------------------------------------    2

    
    ---------------------------GAAUU-----------------------------------------------------------------------------------------------    2

    
    ---------------------------UAAGC-----------------------------------------------------------------------------------------------    2

    
    ---------------------------UCUUC-----------------------------------------------------------------------------------------------    2

    
    ---------------------------AAAC------------------------------------------------------------------------------------------------    2

    
    ---------------------------UUUU------------------------------------------------------------------------------------------------    2

    
    ACUCCGG--------------------UCCGCUUAGCACGGAGUCCGAGAGUGGCAGAGCUCCGUAAAUUCGGAGUUCGCUAUUCGACCACAUGC-------------------------UCGGA--    1

    
    ---------------------------UGUCCUCAAGCCGCCUCGGAGGACGAAGGAGUGGCAGGGCCUCCAGGUCCGCUAUUCGACCACAUGCCUUU-----------------------------    1

    
    AU-CGCUCGCGUGUUAUUCCUGCUAGCCUUGC------------------------------------------------------------------GCUUUUGCAGGUUUGGCGAA-GAGCUCAU    1

    
    UGGUGG----GAGCCCC----------UGUUG------------------------------------------------------------------------------GGGGCGCUAUACCACAG    1

    
    ---------------------------AACAAAAACACCCCUGA-----------------------------------------------------------------------------------    1

    
    ---------------------------AACCAAAAAAGCAAAUA-----------------------------------------------------------------------------------    1

    
    CGCA-----------------------UAUUAAU-----------------------------------------------------------------------------------------UGU-    1

    
    CGCA-----------------------UAUUGAU-----------------------------------------------------------------------------------------UGC-    1

    
    UACAA----------------------AUUAA------------------------------------------------------------------------------------------UUGU-    1

    
    ---------------------------CGAAGAAGAGUAA---------------------------------------------------------------------------------------    1

    
    C--------------------------GCCCUAAUAUA----------------------------------------------------------------------------------------G    1

    
    GCGC-----------------------AAGAC-------------------------------------------------------------------------------------------GCGC    1

    
    ---------------------------CAAAAAAAUGAA----------------------------------------------------------------------------------------    1

    
    GGC------------------------GAAAAU-------------------------------------------------------------------------------------------GCC    1

    
    ---------------------------GAAGAGCAGUA-----------------------------------------------------------------------------------------    1

    
    CC-C-----------------------AAGA--------------------------------------------------------------------------------------------GCGG    1

    
    ---------------------------AAAAAAUACA------------------------------------------------------------------------------------------    1

    
    ---------------------------GCAAGGAACA------------------------------------------------------------------------------------------    1

    
    ---------------------------UCCAAAGCGU------------------------------------------------------------------------------------------    1

    
    G--------------------------CAGGAGUU-------------------------------------------------------------------------------------------C    1

    
    CG-------------------------AGAUG---------------------------------------------------------------------------------------------CG    1

    
    G--------------------------CGGAGUU--------------------------------------------------------------------------------------------C    1

    
    GG-------------------------CGCGU---------------------------------------------------------------------------------------------CC    1

    
    UA-------------------------AAAAC---------------------------------------------------------------------------------------------UG    1

    
    ---------------------------CAAAAAUA--------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAAUUGU--------------------------------------------------------------------------------------------    1

    
    ---------------------------GCGGAGAU--------------------------------------------------------------------------------------------    1

    
    C--------------------------AAAAAC---------------------------------------------------------------------------------------------G    1

    
    C--------------------------AAAAGC---------------------------------------------------------------------------------------------G    1

    
    CA-------------------------AAAA----------------------------------------------------------------------------------------------UG    1

    
    GC-------------------------GAAA----------------------------------------------------------------------------------------------GC    1

    
    U--------------------------AAAAGC---------------------------------------------------------------------------------------------G    1

    
    ---------------------------CAAAGAU---------------------------------------------------------------------------------------------    1

    
    ---------------------------CGGAGAU---------------------------------------------------------------------------------------------    1

    
    ---------------------------UUUCAGC---------------------------------------------------------------------------------------------    1

    
    CG-------------------------UAU-----------------------------------------------------------------------------------------------CG    1

    
    ---------------------------AAAAAG----------------------------------------------------------------------------------------------    1

    
    ---------------------------AAAAUC----------------------------------------------------------------------------------------------    1

    
    ---------------------------AAUAGA----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAGGC----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAUGU----------------------------------------------------------------------------------------------    1

    
    ---------------------------CUAAUC----------------------------------------------------------------------------------------------    1

    
    ---------------------------CUAUGU----------------------------------------------------------------------------------------------    1

    
    ---------------------------GAAAUA----------------------------------------------------------------------------------------------    1

    
    ---------------------------GUAUAG----------------------------------------------------------------------------------------------    1

    
    ---------------------------UAAAGU----------------------------------------------------------------------------------------------    1

    
    ---------------------------UUCACC----------------------------------------------------------------------------------------------    1

    
    A--------------------------UGCG-----------------------------------------------------------------------------------------------U    1

    
    C--------------------------GCAA-----------------------------------------------------------------------------------------------G    1

    
    C--------------------------GUGC-----------------------------------------------------------------------------------------------G    1

    
    G--------------------------GGGA-----------------------------------------------------------------------------------------------C    1

    
    G--------------------------UUCG-----------------------------------------------------------------------------------------------C    1

    
    ---------------------------AAGAA-----------------------------------------------------------------------------------------------    1

    
    ---------------------------AAGAU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------AAUAU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------ACACC-----------------------------------------------------------------------------------------------    1

    
    ---------------------------AGAGC-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAAU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAGA-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAGG-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CAUGA-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CGAGG-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CUCGC-----------------------------------------------------------------------------------------------    1

    
    ---------------------------CUUGU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------GAAAA-----------------------------------------------------------------------------------------------    1

    
    ---------------------------GAAAU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------GCAAU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------GGGGU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UAUGG-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UCCUC-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UCGUG-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UCUUG-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UCUUU-----------------------------------------------------------------------------------------------    1

    
    ---------------------------UUCUU-----------------------------------------------------------------------------------------------    1

    
    C--------------------------AAA------------------------------------------------------------------------------------------------G    1

    
    C--------------------------AAG------------------------------------------------------------------------------------------------G    1

    
    G--------------------------UUU------------------------------------------------------------------------------------------------C    1

    
    ---------------------------ACAA------------------------------------------------------------------------------------------------    1

    
    ---------------------------CAAG------------------------------------------------------------------------------------------------    1

    
    ---------------------------CAGG------------------------------------------------------------------------------------------------    1

    
    ---------------------------CAUC------------------------------------------------------------------------------------------------    1

    
    ---------------------------CUUA------------------------------------------------------------------------------------------------    1

    
    ---------------------------GAGA------------------------------------------------------------------------------------------------    1

    
    ---------------------------UAAA------------------------------------------------------------------------------------------------    1

    
    ---------------------------UAAC------------------------------------------------------------------------------------------------    1

    
    ---------------------------UAAG------------------------------------------------------------------------------------------------    1

    
    ---------------------------UCCG------------------------------------------------------------------------------------------------    1

    
    ---------------------------UUCU------------------------------------------------------------------------------------------------    1

    
    ---------------------------UUUA------------------------------------------------------------------------------------------------    1

    
    ---------------------------AGA-------------------------------------------------------------------------------------------------    1

    
    ---------------------------AUA-------------------------------------------------------------------------------------------------    1

    
    ---------------------------AUU-------------------------------------------------------------------------------------------------    1

    
    ---------------------------CUU-------------------------------------------------------------------------------------------------    1

Click on headings to reorder table

#	Matching motif group	Acceptance Rate	Mean Cutoff Score	Full Edit Distance	Interior Edit Distance	Basepair Diagram and most common annotation
1	Motif group HL_53890.2 View motif instance in 3D Basepair signature: cWW-F-F-F	44.47	-178.41	2	1
2	Motif group HL_38168.1 View motif instance in 3D Basepair signature: cWW-F	34.02	-1475.67	2	3
3	Motif group HL_48417.5 View motif instance in 3D Basepair signature: cWW-F-F	32.38	-148.51	3	2
4	Motif group HL_75660.5 View motif instance in 3D Basepair signature: cWW-F	32.17	-1462.55	2	2
5	Motif group HL_56131.2 View motif instance in 3D Basepair signature: cWW-F-F	28.07	-206.68	4	3
6	Motif group HL_70782.2 View motif instance in 3D Basepair signature: cWW-F	23.98	-444.43	4	3
7	Motif group HL_57176.2 View motif instance in 3D Basepair signature: cWW-F-F-F	20.29	-2022.03	3	2	Pseudoknot geometry with 3' bulge
8	Motif group HL_50006.2 View motif instance in 3D Basepair signature: cWW-F-F	19.26	-201.26	3	2
9	Motif group HL_86870.2 View motif instance in 3D Basepair signature: cWW-F-F-F	17.42	-177.31	3	2
10	Motif group HL_69752.2 View motif instance in 3D Basepair signature: cWW-F	16.60	-1486.60	4	2
11	Motif group HL_04783.2 View motif instance in 3D Basepair signature: cWW-F-F-F	15.57	-161.88	3	2
12	Motif group HL_32392.1 View motif instance in 3D Basepair signature: cWW-F-F	15.37	-389.50	4	4
13	Motif group HL_56334.1 View motif instance in 3D Basepair signature: cWW-F	15.37	-535.22	3	2.5	Mini UNCG
14	Motif group HL_93535.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	15.37	-1247.64	4	2
15	Motif group HL_82710.2 View motif instance in 3D Basepair signature: cWW-F-F-F	15.16	-279.35	3	3
16	Motif group HL_46501.1 View motif instance in 3D Basepair signature: cWW-cWS	15.16	-358.81	4	3
17	Motif group HL_38901.2 View motif instance in 3D Basepair signature: cWW-F-cSH	14.96	-343.68	3	2	tRNA D-loop
18	Motif group HL_56676.1 View motif instance in 3D Basepair signature: cWW-F-F	14.75	-1306.79	4	3
19	Motif group HL_81100.2 View motif instance in 3D Basepair signature: cWW	14.75	-3474.91	4	4
20	Motif group HL_60914.1 View motif instance in 3D Basepair signature: cWW-F	14.55	-1771.55	4	4
21	Motif group HL_35941.1 View motif instance in 3D Basepair signature: cWW-F	14.34	-719.71	4	4
22	Motif group HL_48778.2 View motif instance in 3D Basepair signature: cWW-F	13.93	-460.75	2	2	Mini UNCG
23	Motif group HL_55195.3 View motif instance in 3D Basepair signature: cWW-F	13.52	-1603.57	3	3
24	Motif group HL_99040.1 View motif instance in 3D Basepair signature: F-F-F-F-F-F	13.52	-3536.16	5	4
25	Motif group HL_29966.1 View motif instance in 3D Basepair signature: cWW-F-F-F	13.32	-2128.36	4	3
26	Motif group HL_34617.5 View motif instance in 3D Basepair signature: cWW-tSW-F	12.70	-262.49	3	2	UNCG
27	Motif group HL_13963.3 View motif instance in 3D Basepair signature: cWW-F-F	12.50	-239.96	5	3
28	Motif group HL_71391.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	12.09	-269.57	4	3
29	Motif group HL_43517.1 View motif instance in 3D Basepair signature: cWW-F-F-F	11.68	-325.41	4	4
30	Motif group HL_32346.4 View motif instance in 3D Basepair signature: cWW-F	11.48	-533.55	3	2
31	Motif group HL_37824.7 View motif instance in 3D Basepair signature: cWW-F-F-F-F	10.45	-228.38	2	1	GNRA
32	Motif group HL_39243.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	9.43	-3947.73	4	3
33	Motif group HL_49922.4 View motif instance in 3D Basepair signature: cWW-F-F-F	8.40	-228.64	3	2
34	Motif group HL_07886.3 View motif instance in 3D Basepair signature: cWW-F-F-F	7.38	-184.16	3	3
35	Motif group HL_13189.1 View motif instance in 3D Basepair signature: cWW-F-F	6.76	-298.68	4	3
36	Motif group HL_57875.1 View motif instance in 3D Basepair signature: cWW-F-F	5.53	-277.47	3	2
37	Motif group HL_76094.1 View motif instance in 3D Basepair signature: cWW-cWS-F-F	4.71	-1415.96	3	3
38	Motif group HL_59843.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	4.30	-1277.61	4	2
39	Motif group HL_80709.3 View motif instance in 3D Basepair signature: cWW-F-F-F	4.30	-2139.68	3	2
40	Motif group HL_13529.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	3.89	-174.26	4	3
41	Motif group HL_20811.4 View motif instance in 3D Basepair signature: cWW-cWS-F	3.69	-182.45	4	3	tRNA D-loop
42	Motif group HL_94980.1 View motif instance in 3D Basepair signature: cWW-F-F	3.48	-1969.09	4	4
43	Motif group HL_65794.5 View motif instance in 3D Basepair signature: cWW-F-F-F-F	3.28	-4000.64	3	2	Pseudoknot geometry
44	Motif group HL_78677.1 View motif instance in 3D Basepair signature: cWW-F-F	2.87	-717.77	4	3
45	Motif group HL_47854.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	2.87	-1018.53	4	3
46	Motif group HL_87553.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	2.46	-242.38	4	3
47	Motif group HL_97917.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	2.46	-1272.34	5	4
48	Motif group HL_52953.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F	2.46	-4190.77	3	2
49	Motif group HL_22135.1 View motif instance in 3D Basepair signature: cWW-F-F	2.05	-1757.19	4	4
50	Motif group HL_10540.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	1.84	-231.70	5	3
51	Motif group HL_62934.1 View motif instance in 3D Basepair signature: cWW-tSH-F	1.84	-248.87	4	3
52	Motif group HL_80922.2 View motif instance in 3D Basepair signature: cWW-tSH-F	1.64	-209.85	4	3
53	Motif group HL_66103.1 View motif instance in 3D Basepair signature: cWW-F-F	1.64	-322.44	4	3
54	Motif group HL_86883.1 View motif instance in 3D Basepair signature: cWW-F-F-F	1.64	-2173.78	4	3
55	Motif group HL_28791.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	1.64	-4250.64	5	4
56	Motif group HL_87954.2 View motif instance in 3D Basepair signature: cWW-tSW-F	1.43	-233.78	3	2
57	Motif group HL_09452.1 View motif instance in 3D Basepair signature: cWW-F-F-F	1.43	-6608.70	5	4
58	Motif group HL_04259.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	1.23	-269.07	4	3	GNRA with extra cWW
59	Motif group HL_57863.1 View motif instance in 3D Basepair signature: cWW-F-F-cWH-cWH-F	1.23	-702.65	6	5	G-quadruplex fragment
60	Motif group HL_26631.1 View motif instance in 3D Basepair signature: cWW-F-F-F	1.23	-2320.22	4	3
61	Motif group HL_86769.4 View motif instance in 3D Basepair signature: cWW-cWW-cSH-F	1.02	-221.37	5	4
62	Motif group HL_89893.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	1.02	-1023.39	4	3
63	Motif group HL_74292.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	1.02	-5543.94	6	5
64	Motif group HL_30680.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	1.02	-6424.43	4	3	Pseudoknot geometry
65	Motif group HL_59735.5 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	1.02	-6632.30	4	3
66	Motif group HL_98864.1 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F-F-F	0.82	-652.62	6	5	T-loop with unstacked turn
67	Motif group HL_47787.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.82	-1286.70	3	2
68	Motif group HL_30068.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.82	-1306.19	4	3
69	Motif group HL_55436.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.82	-3507.55	6	5
70	Motif group HL_99867.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.82	-6170.10	6	5
71	Motif group HL_93438.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.61	-179.12	6	4
72	Motif group HL_70658.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.61	-244.76	8	7
73	Motif group HL_50318.1 View motif instance in 3D Basepair signature: cWW-cSH-F-F	0.61	-343.15	5	4
74	Motif group HL_37344.1 View motif instance in 3D Basepair signature: cWW-F-F	0.61	-1172.68	5	4
75	Motif group HL_87463.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F	0.61	-1553.11	7	6
76	Motif group HL_04641.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.61	-1676.90	6	5
77	Motif group HL_89199.2 View motif instance in 3D Basepair signature: cWW-F-F-F	0.61	-1909.27	4	3	Mini UNCG
78	Motif group HL_27670.2 View motif instance in 3D Basepair signature: cWW-tWH-F-F	0.61	-2176.26	4	3	T-loop with unstacked turn
79	Motif group HL_29129.3 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F	0.61	-2256.70	8	6
80	Motif group HL_31585.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.61	-2884.12	4	3	Purine riboswitch
81	Motif group HL_97733.1 View motif instance in 3D Basepair signature: cWW-F-F-F-cSH-F	0.61	-3208.51	7	6
82	Motif group HL_59330.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.61	-3950.92	6	5
83	Motif group HL_93324.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.61	-5419.51	4	2	Pseudoknot geometry
84	Motif group HL_78284.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F	0.61	-5456.85	8	6
85	Motif group HL_22622.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.61	-6139.44	5	4
86	Motif group HL_50860.2 View motif instance in 3D Basepair signature: cWW-F-cWH-F-F-F-F	0.41	-158.60	5	4
87	Motif group HL_22584.6 View motif instance in 3D Basepair signature: cWW-tSW-F	0.41	-231.60	3	2	Fab BL3-6 binding hairpin with tSW
88	Motif group HL_08100.1 View motif instance in 3D Basepair signature: cWW-F-F-F	0.41	-290.71	4	3
89	Motif group HL_99748.1 View motif instance in 3D Basepair signature: cWW-F-F-cSH	0.41	-976.68	6	4	Other HL
90	Motif group HL_50537.6 View motif instance in 3D Basepair signature: cWW-F-F-F	0.41	-1058.05	5	4	tRNA anticodon loop with synthetase
91	Motif group HL_65313.1 View motif instance in 3D Basepair signature: cWW-F-F-F	0.41	-2172.61	5	4
92	Motif group HL_20743.5 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F	0.20	-179.00	5	4
93	Motif group HL_28075.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.20	-254.70	5	3
94	Motif group HL_27483.1 View motif instance in 3D Basepair signature: cWW-F	0.20	-275.18	4	4
95	Motif group HL_75293.5 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.20	-878.94	6	5
96	Motif group HL_64690.6 View motif instance in 3D Basepair signature: cWW-cSW-F-F-F-F	0.20	-968.11	4	3
97	Motif group HL_77082.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.20	-1134.94	4	3	Pseudoknot geometry
98	Motif group HL_34964.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.20	-1296.45	8	6
99	Motif group HL_02817.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.20	-2324.22	4	3
100	Motif group HL_15574.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.20	-2877.57	4	3
101	Motif group HL_38046.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.20	-3543.25	6	4
102	Motif group HL_83632.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.20	-3723.39	5	4	tRNA anticodon loop
103	Motif group HL_85993.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.20	-5045.96	5	4
104	Motif group HL_51447.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.20	-5139.16	5	4
105	Motif group HL_67667.2 View motif instance in 3D Basepair signature: cWW-F-F	0.20	-5198.44	6	5
106	Motif group HL_80241.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.20	-6990.81	6	4
107	Motif group HL_97983.1 View motif instance in 3D Basepair signature: cWW-F-F	0.20	-7853.91	7	6
108	Motif group HL_86012.1 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F	0.00	-168.57	7	5	T-loop with unstacked turn
109	Motif group HL_02887.3 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F-F-F	0.00	-179.04	7	5	T-loop with 3 stacked bulged bases
110	Motif group HL_20167.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-179.61	4	4
111	Motif group HL_26934.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-182.53	7	5
112	Motif group HL_83808.4 View motif instance in 3D Basepair signature: cWW-tWW-F-F-F	0.00	-189.19	7	6	Pseudoknot
113	Motif group HL_81545.2 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F	0.00	-189.41	6	4
114	Motif group HL_61996.2 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F	0.00	-189.95	5	4
115	Motif group HL_73266.9 View motif instance in 3D Basepair signature: cWW-F-F-cSW-cSH-F	0.00	-215.88	5	4
116	Motif group HL_36335.1 View motif instance in 3D Basepair signature: cWW-F-F-cSS-cSS-F	0.00	-221.32	6	5
117	Motif group HL_41902.1 View motif instance in 3D Basepair signature: cWW-cWW-cWH-F-F-F-F-F	0.00	-222.85	8	7
118	Motif group HL_41543.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-223.24	8	7
119	Motif group HL_18423.1 View motif instance in 3D Basepair signature: cWW-tSH-tHS-F	0.00	-224.70	7	5
120	Motif group HL_74379.3 View motif instance in 3D Basepair signature: cWW-F-F-cSS-cSS-F-F-F	0.00	-225.13	8	6
121	Motif group HL_25847.2 View motif instance in 3D Basepair signature: cWW-F-cSH-tHW-F-F-F	0.00	-232.15	7	5
122	Motif group HL_89567.2 View motif instance in 3D Basepair signature: cWW-F-F-F	0.00	-232.44	5	4
123	Motif group HL_28252.8 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F-F-F	0.00	-232.78	4	3	T-loop with 2 stacked bulged bases
124	Motif group HL_90620.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-cSW-cSH-F	0.00	-234.60	7	6
125	Motif group HL_67079.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-236.25	7	6
126	Motif group HL_78347.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.00	-238.28	5	4
127	Motif group HL_01609.3 View motif instance in 3D Basepair signature: cWW-tWH-F-F-F	0.00	-240.65	4	3	T-loop with 2 bulged bases not stacked
128	Motif group HL_60266.1 View motif instance in 3D Basepair signature: cWW-cWW-tWH-F-F-F-F	0.00	-243.86	7	5
129	Motif group HL_01962.2 View motif instance in 3D Basepair signature: cWW-tWH-tWH-F	0.00	-244.97	7	5
130	Motif group HL_41464.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-246.35	5	4
131	Motif group HL_04171.7 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F-F	0.00	-253.09	7	5
132	Motif group HL_49941.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-253.62	8	7	tRNA D-loop
133	Motif group HL_86109.1 View motif instance in 3D Basepair signature: cWW-F-tWH-F-F-F-F-F-F-F	0.00	-254.40	9	7
134	Motif group HL_42046.2 View motif instance in 3D Basepair signature: cWW-tSS-F-F-F	0.00	-260.80	5	4
135	Motif group HL_77436.5 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-264.75	4	3	T-loop related
136	Motif group HL_07583.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F	0.00	-264.95	9	7
137	Motif group HL_81205.3 View motif instance in 3D Basepair signature: cWW-cWW-tWH-F-tWH-F-F-F-F-F	0.00	-267.42	9	8
138	Motif group HL_40252.4 View motif instance in 3D Basepair signature: cWW-tSH-cWS-F	0.00	-268.52	7	6
139	Motif group HL_08602.1 View motif instance in 3D Basepair signature: cWW-cSS-F-cSS-F-F-F-F-F	0.00	-272.13	9	8
140	Motif group HL_53504.3 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F-F	0.00	-274.99	6	5
141	Motif group HL_84847.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-tWW-F-F-F-F-F-F	0.00	-277.77	10	9
142	Motif group HL_74055.2 View motif instance in 3D Basepair signature: cWW-tWH-cWH-tSH-tHW-tHW-tSW	0.00	-280.70	10	9
143	Motif group HL_68767.1 View motif instance in 3D Basepair signature: cWW-cWS-tSH-cWS-F	0.00	-297.92	8	7	tRNA D-loop
144	Motif group HL_73247.1 View motif instance in 3D Basepair signature: cWW-F-tWH-F-F-F-F-F-F-F-F-F-F	0.00	-315.18	11	9	Pseudoknot geometry
145	Motif group HL_98870.1 View motif instance in 3D Basepair signature: cWW-tSH-tWW-F-F-F-F-F	0.00	-328.80	11	9
146	Motif group HL_91641.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-cSW-F-F-F-F	0.00	-341.31	12	11
147	Motif group HL_14757.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-tSW-tWW-cWW-tHW-tSW-F-cWH-F	0.00	-343.07	14	12
148	Motif group HL_13971.1 View motif instance in 3D Basepair signature: cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F	0.00	-346.28	11	9
149	Motif group HL_88205.2 View motif instance in 3D Basepair signature: cWW-cWS-tSW-F-F	0.00	-406.40	6	5
150	Motif group HL_92488.1 View motif instance in 3D Basepair signature: cWW-cWW-F-cSS-F-F-F-F-F-F	0.00	-537.41	11	10
151	Motif group HL_97756.2 View motif instance in 3D Basepair signature: cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F	0.00	-549.72	11	9
152	Motif group HL_16991.1 View motif instance in 3D Basepair signature: cWW-cWH-cWH-F-cWH-F	0.00	-708.79	9	7	G-quadruplex fragment
153	Motif group HL_23509.1 View motif instance in 3D Basepair signature: cSH-F-F-F-F-F-F-F-F-F	0.00	-710.30	8	7
154	Motif group HL_68257.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-710.61	8	6
155	Motif group HL_04642.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-741.29	7	6	tRNA D-loop
156	Motif group HL_66853.7 View motif instance in 3D Basepair signature: cWW-cWS-F-cSH	0.00	-791.50	6	4
157	Motif group HL_51921.1 View motif instance in 3D Basepair signature: cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F	0.00	-794.52	16	14
158	Motif group HL_98252.1 View motif instance in 3D Basepair signature: cWW-tWW-F-F-F-F	0.00	-800.74	8	7
159	Motif group HL_18565.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F	0.00	-824.96	5	4
160	Motif group HL_45175.1 View motif instance in 3D Basepair signature: cWW-cWS-F-F	0.00	-870.19	6	5	tRNA D-loop
161	Motif group HL_84299.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-908.51	5	4
162	Motif group HL_73255.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-910.02	7	6
163	Motif group HL_06226.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-1007.61	6	5
164	Motif group HL_18978.1 View motif instance in 3D Basepair signature: cWW-F-F-tHW-F-F-F	0.00	-1008.03	8	7
165	Motif group HL_91939.2 View motif instance in 3D Basepair signature: cWW-tSH-tHH-tWW-F-F-F	0.00	-1010.48	8	6
166	Motif group HL_02581.1 View motif instance in 3D Basepair signature: cWW-tSH-cWS-tSW-F-F-F	0.00	-1042.96	11	10	tRNA D-loop
167	Motif group HL_07480.2 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F	0.00	-1054.06	7	6
168	Motif group HL_15802.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F	0.00	-1132.70	7	5
169	Motif group HL_21372.1 View motif instance in 3D Basepair signature: cWW-F-cSH-F-F	0.00	-1167.02	6	5
170	Motif group HL_81538.2 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F	0.00	-1190.27	4	3	GNRA with tandem sheared
171	Motif group HL_20535.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.00	-1222.75	4	4
172	Motif group HL_37369.2 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F	0.00	-1398.86	5	4
173	Motif group HL_89881.5 View motif instance in 3D Basepair signature: cWW-tHW-F-F-F-F-F-F	0.00	-1432.74	8	6
174	Motif group HL_02483.1 View motif instance in 3D Basepair signature: cWW-tWH-F-cSH-F-F-F	0.00	-1440.39	8	6
175	Motif group HL_25967.2 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F	0.00	-1476.12	5	4
176	Motif group HL_45785.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-cSH-F-F	0.00	-1485.32	9	8
177	Motif group HL_05304.3 View motif instance in 3D Basepair signature: cWW-cWW-F-F-tSH-F-F-F-F-F	0.00	-1513.66	9	7
178	Motif group HL_58224.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-1628.44	7	6
179	Motif group HL_23010.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-1673.18	7	6
180	Motif group HL_33983.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-1908.93	6	5
181	Motif group HL_53454.2 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F	0.00	-1926.73	6	5
182	Motif group HL_93616.2 View motif instance in 3D Basepair signature: cWW-cWS-F-F-F-F	0.00	-1949.62	8	6	tRNA D-loop
183	Motif group HL_25061.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.00	-1993.92	6	5
184	Motif group HL_85434.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F-F	0.00	-2004.19	8	6
185	Motif group HL_93383.1 View motif instance in 3D Basepair signature: cWW-cSH-F-F-F-F-F-F	0.00	-2050.75	6	4
186	Motif group HL_06059.6 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-2155.17	4	4	tRNA anticodon loop
187	Motif group HL_10453.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-2452.85	5	3	tRNA anticodon loop
188	Motif group HL_00914.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.00	-2459.44	5	4
189	Motif group HL_80008.1 View motif instance in 3D Basepair signature: cWW-F-F-F-cSH-F	0.00	-2744.12	6	5
190	Motif group HL_72628.1 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F	0.00	-2750.20	6	5
191	Motif group HL_99769.3 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F	0.00	-2843.79	7	6
192	Motif group HL_11542.1 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F-F	0.00	-2969.77	9	8
193	Motif group HL_12870.1 View motif instance in 3D Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F	0.00	-3209.39	10	8
194	Motif group HL_08510.1 View motif instance in 3D Basepair signature: cWW-F-F-cSH-F-F	0.00	-3356.71	7	6
195	Motif group HL_38649.1 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F-F	0.00	-3397.09	8	6
196	Motif group HL_80599.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-3466.03	6	4
197	Motif group HL_10456.1 View motif instance in 3D Basepair signature: cWW-F-cWW-tWW-F-tHW-F-F-F-F-F-F-F	0.00	-3602.17	13	12
198	Motif group HL_33074.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-3607.88	8	7	U1 small nuclear ribonucleoprotein A binding hairpin
199	Motif group HL_85367.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-3608.51	5	3
200	Motif group HL_66482.1 View motif instance in 3D Basepair signature: cWW-cWW-tWW-F-F-tWH-F-F-F-F-F-F-F-F	0.00	-3624.15	13	12
201	Motif group HL_89346.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-3682.75	15	13
202	Motif group HL_32735.2 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F	0.00	-3705.03	5	4
203	Motif group HL_99324.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-3975.37	12	11
204	Motif group HL_59564.1 View motif instance in 3D Basepair signature: cWW-F-cSS-F-cSS-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-4005.21	16	14
205	Motif group HL_85461.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-4014.37	15	14
206	Motif group HL_00317.1 View motif instance in 3D Basepair signature: cWW-F-cSS-F-F-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-4015.50	16	14
207	Motif group HL_60293.1 View motif instance in 3D Basepair signature: cWW-cWH-F-cWH-cHW-cHW-cWH-cHW-cWH-F-cWH-cWH-cWH-F	0.00	-4033.49	17	16	G-quadruplex
208	Motif group HL_38808.1 View motif instance in 3D Basepair signature: cWW-cWW	0.00	-4039.20	5	4
209	Motif group HL_21400.1 View motif instance in 3D Basepair signature: cWW-tWH-tSW-cWW-cWH-cHW-cWH-cWH-cHW-cWH-cHW-cWH-cWH-cWH-cWH-cWH	0.00	-4043.97	19	18	G-quadruplex
210	Motif group HL_35354.1 View motif instance in 3D Basepair signature: cWW-cWH-cHW-F-cWH-cHW-F-F-tHH-cWH-tWW-cWH-F-tWW-cWH-F-cWH	0.00	-4069.19	20	18
211	Motif group HL_12758.3 View motif instance in 3D Basepair signature: cWW-tSH-F-cHW-F-F-cWH-cHW-cWH-cHW-cWH-cWH-F-tSH-F-cHW-F-cWH-cWH	0.00	-4081.37	20	19	G-quadruplex
212	Motif group HL_24792.1 View motif instance in 3D Basepair signature: cWW-cWS-F-F-F	0.00	-4152.41	8	6
213	Motif group HL_50851.1 View motif instance in 3D Basepair signature: cWW-cWH-cWH-cWH-cWH-F	0.00	-4165.64	9	8	G-quadruplex fragment
214	Motif group HL_20751.2 View motif instance in 3D Basepair signature: cWW-tHW-F-F-F-F-F-F-F-F-F	0.00	-4344.54	9	8
215	Motif group HL_04725.1 View motif instance in 3D Basepair signature: cWW-cWS-cWW-cWW-cWS	0.00	-4468.16	8	7
216	Motif group HL_42998.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-4556.88	4	3
217	Motif group HL_73183.1 View motif instance in 3D Basepair signature: cWW-tSH-tHW-F-F-F-F-F-F-F-F-F	0.00	-4576.85	10	9	Pseudoknot geometry with G-bulge
218	Motif group HL_73916.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F	0.00	-4608.12	35	33
219	Motif group HL_67407.5 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-4608.41	7	6
220	Motif group HL_23115.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-4620.97	8	7	tRNA D-loop
221	Motif group HL_07903.1 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F-F	0.00	-4664.52	11	9
222	Motif group HL_31581.6 View motif instance in 3D Basepair signature: cWW-cHS-F-F-F-cWW-F-F-F	0.00	-4675.45	8	7
223	Motif group HL_63355.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F-F-F	0.00	-4714.01	9	8
224	Motif group HL_50779.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-4790.59	6	5
225	Motif group HL_81312.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-4819.69	8	7
226	Motif group HL_91503.7 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-4828.21	7	6
227	Motif group HL_19210.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-4842.75	6	5
228	Motif group HL_88558.1 View motif instance in 3D Basepair signature: cWW-tSH-F-F-F-F-F-F-F	0.00	-4843.90	8	7
229	Motif group HL_80411.1 View motif instance in 3D Basepair signature: cWW-F-cSH-F-F-F-F	0.00	-4855.26	8	7	tRNA D-loop
230	Motif group HL_88364.2 View motif instance in 3D Basepair signature: cWW-cWW-F-F-F-F-F-F-F-F-F-F-F	0.00	-4884.88	12	11
231	Motif group HL_29762.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-4902.95	7	6
232	Motif group HL_55305.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-4971.72	8	7
233	Motif group HL_15118.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-5001.90	8	7
234	Motif group HL_94376.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-5065.11	7	6	Pseudoknot geometry
235	Motif group HL_01255.1 View motif instance in 3D Basepair signature: F-F-F-F-F-F-F-F	0.00	-5104.17	8	7
236	Motif group HL_93135.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-5149.10	8	6	Pseudoknot
237	Motif group HL_78197.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-5205.97	5	4
238	Motif group HL_70751.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-5293.06	7	6
239	Motif group HL_16398.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-5313.42	8	7
240	Motif group HL_36684.4 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-5444.12	7	5
241	Motif group HL_47732.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F	0.00	-5485.72	8	7
242	Motif group HL_80362.1 View motif instance in 3D Basepair signature: cWW-F-F-F	0.00	-5522.28	6	5
243	Motif group HL_50418.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F-F	0.00	-5559.82	7	6
244	Motif group HL_64292.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-5596.03	12	11
245	Motif group HL_69139.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-5626.51	8	6
246	Motif group HL_29958.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-5720.05	10	9
247	Motif group HL_68572.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-5734.30	9	8
248	Motif group HL_35677.3 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F	0.00	-5776.37	6	5
249	Motif group HL_77600.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F	0.00	-6451.93	5	4
250	Motif group HL_20781.1 View motif instance in 3D Basepair signature: cWW-F-F-F-F-F-F-F-F	0.00	-6577.25	7	5
251	Motif group HL_58539.1 View motif instance in 3D Basepair signature: cWW-tWS-F-tHW-F-F-F-F-F-F-F-F	0.00	-7752.30	11	10
252	Motif group HL_07951.3 View motif instance in 3D Basepair signature: cWW-F-F	0.00	-9999.00	6	5	tRNA D-loop
253	Motif group HL_09260.2 View motif instance in 3D Basepair signature: cWW-F-F-F-F	0.00	-9999.00	8	6.5	tRNA D-loop