4V4T | Motifs

105 Hairpin loops
139 Internal loops
25 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_4V4T_001 ➜	1/AA/10:24	NA	NA
2	HL_4V4T_003 ➜	1/AA/158:163	NA	NA
3	HL_4V4T_004 ➜	1/AA/190B:190G	NA	NA
4	HL_4V4T_005 ➜	1/AA/201:216	NA	NA
5	HL_4V4T_006 ➜	1/AA/259:267	NA	NA
6	HL_4V4T_007 ➜	1/AA/296:301	NA	NA
7	HL_4V4T_008 ➜	1/AA/320:333	NA	NA
8	HL_4V4T_010 ➜	1/AA/379:384	NA	NA
9	HL_4V4T_011 ➜	1/AA/419:424	NA	NA
10	HL_4V4T_012 ➜	1/AA/458:474	NA	NA
11	HL_4V4T_013 ➜	1/AA/522:527	NA	NA
12	HL_4V4T_014 ➜	1/AA/617:623	NA	NA
13	HL_4V4T_015 ➜	1/AA/689:698	NA	NA
14	HL_4V4T_016 ➜	1/AA/726:731	NA	NA
15	HL_4V4T_017 ➜	1/AA/786:796	NA	NA
16	HL_4V4T_018 ➜	1/AA/838:848	NA	NA
17	HL_4V4T_020 ➜	1/AA/897:902	NA	NA
18	HL_4V4T_021 ➜	1/AA/963:972	NA	NA
19	HL_4V4T_022 ➜	1/AA/1011:1018	NA	NA
20	HL_4V4T_023 ➜	1/AA/1076:1081	NA	NA
21	HL_4V4T_024 ➜	1/AA/1089:1096	NA	NA
22	HL_4V4T_025 ➜	1/AA/1134:1140	NA	NA
23	HL_4V4T_026 ➜	1/AA/1165:1171	NA	NA
24	HL_4V4T_027 ➜	1/AA/1265:1270	NA	NA
25	HL_4V4T_028 ➜	1/AA/1314:1323	NA	NA
26	HL_4V4T_029 ➜	1/AA/1356:1366	NA	NA
27	HL_4V4T_030 ➜	1/AA/1449:1454	NA	NA
28	HL_4V4T_031 ➜	1/AA/1515:1520	NA	NA
29	HL_4V4T_032 ➜	1/AV/13:22	NA	NA
30	HL_4V4T_033 ➜	1/AV/31:39	NA	NA
31	HL_4V4T_034 ➜	1/AV/53:61	NA	NA
32	HL_4V4T_035 ➜	1/AW/13:22	NA	NA
33	HL_4V4T_036 ➜	1/AW/30:40	NA	NA
34	HL_4V4T_037 ➜	1/AW/53:61	NA	NA
35	HL_4V4T_038 ➜	1/BA/58:69	NA	NA
36	HL_4V4T_039 ➜	1/BA/87:95	NA	NA
37	HL_4V4T_040 ➜	1/BA/123:128	NA	NA
38	HL_4V4T_041 ➜	1/BA/134:145	NA	NA
39	HL_4V4T_042 ➜	1/BA/194:201	NA	NA
40	HL_4V4T_043 ➜	1/BA/225:230	NA	NA
41	HL_4V4T_044 ➜	1/BA/246:252	NA	NA
42	HL_4V4T_045 ➜	1/BA/270I:270Q	NA	NA
43	HL_4V4T_046 ➜	1/BA/305:312	NA	NA
44	HL_4V4T_047 ➜	1/BA/319:323	NA	NA
45	HL_4V4T_048 ➜	1/BA/327:335	NA	NA
46	HL_4V4T_049 ➜	1/BA/382:392	NA	NA
47	HL_4V4T_050 ➜	1/BA/410:417	NA	NA
48	HL_4V4T_051 ➜	1/BA/462:467	NA	NA
49	HL_4V4T_052 ➜	1/BA/487:493	NA	NA
50	HL_4V4T_053 ➜	1/BA/543:550	NA	NA
51	HL_4V4T_054 ➜	1/BA/564:577	NA	NA
52	HL_4V4T_055 ➜	1/BA/605:623	NA	NA
53	HL_4V4T_056 ➜	1/BA/629:634	NA	NA
54	HL_4V4T_057 ➜	1/BA/712:719	NA	NA
55	HL_4V4T_058 ➜	1/BA/744:753	NA	NA
56	HL_4V4T_059 ➜	1/BA/779:785	NA	NA
57	HL_4V4T_060 ➜	1/BA/826:831	NA	NA
58	HL_4V4T_061 ➜	1/BA/884:892	NA	NA
59	HL_4V4T_062 ➜	1/BA/955:962	NA	NA
60	HL_4V4T_063 ➜	1/BA/978:985	NA	NA
61	HL_4V4T_064 ➜	1/BA/1062:1076	NA	NA
62	HL_4V4T_065 ➜	1/BA/1092:1099	NA	NA
63	HL_4V4T_066 ➜	1/BA/1171:1178	NA	NA
64	HL_4V4T_067 ➜	1/BA/1221:1228	NA	NA
65	HL_4V4T_068 ➜	1/BA/1281:1289	NA	NA
66	HL_4V4T_069 ➜	1/BA/1324:1330	NA	NA
67	HL_4V4T_070 ➜	1/BA/1363:1368	NA	NA
68	HL_4V4T_071 ➜	1/BA/1389:1398	NA	NA
69	HL_4V4T_072 ➜	1/BA/1450:1461	NA	NA
70	HL_4V4T_073 ➜	1/BA/1488:1501	NA	NA
71	HL_4V4T_074 ➜	1/BA/1612:1619	NA	NA
72	HL_4V4T_075 ➜	1/BA/1630:1636	NA	NA
73	HL_4V4T_076 ➜	1/BA/1691:1696	NA	NA
74	HL_4V4T_077 ➜	1/BA/1716:1743	NA	NA
75	HL_4V4T_078 ➜	1/BA/1752:1756	NA	NA
76	HL_4V4T_079 ➜	1/BA/1777:1787	NA	NA
77	HL_4V4T_080 ➜	1/BA/1806:1811	NA	NA
78	HL_4V4T_081 ➜	1/BA/1864:1878	NA	NA
79	HL_4V4T_082 ➜	1/BA/1910:1920	NA	NA
80	HL_4V4T_083 ➜	1/BA/1949:1957	NA	NA
81	HL_4V4T_084 ➜	1/BA/2027:2036	NA	NA
82	HL_4V4T_086 ➜	1/BA/2209:2215	NA	NA
83	HL_4V4T_087 ➜	1/BA/2247:2257	NA	NA
84	HL_4V4T_088 ➜	1/BA/2264:2276	NA	NA
85	HL_4V4T_089 ➜	1/BA/2304:2312	NA	NA
86	HL_4V4T_090 ➜	1/BA/2324:2331	NA	NA
87	HL_4V4T_091 ➜	1/BA/2355:2362	NA	NA
88	HL_4V4T_092 ➜	1/BA/2374:2379	NA	NA
89	HL_4V4T_093 ➜	1/BA/2404:2413	NA	NA
90	HL_4V4T_094 ➜	1/BA/2471:2479	NA	NA
91	HL_4V4T_095 ➜	1/BA/2528:2535	NA	NA
92	HL_4V4T_096 ➜	1/BA/2549:2559	NA	NA
93	HL_4V4T_097 ➜	1/BA/2592:2601	NA	NA
94	HL_4V4T_098 ➜	1/BA/2651:2669	NA	NA
95	HL_4V4T_099 ➜	1/BA/2699:2708	NA	NA
96	HL_4V4T_100 ➜	1/BA/2745:2759	NA	NA
97	HL_4V4T_101 ➜	1/BA/2792:2803	NA	NA
98	HL_4V4T_102 ➜	1/BA/2819:2827	NA	NA
99	HL_4V4T_103 ➜	1/BA/2856:2861	NA	NA
100	HL_4V4T_104 ➜	1/BB/33:49	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_4V4T_002 ➜	missing nts	NA
2	HL_4V4T_009 ➜	missing nts	NA
3	HL_4V4T_019 ➜	all high RSRZ	NA
4	HL_4V4T_085 ➜	missing nts	NA
5	HL_4V4T_105 ➜	all high RSRZ	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_4V4T_001 ➜	1/AA/30:33,1/AA/551:553	NA	NA
2	IL_4V4T_002 ➜	1/AA/44:46,1/AA/395:398	NA	NA
3	IL_4V4T_003 ➜	1/AA/47:52,1/AA/359:361	NA	NA
4	IL_4V4T_004 ➜	1/AA/54:56,1/AA/356:357	NA	NA
5	IL_4V4T_005 ➜	1/AA/63:66,1/AA/103:104	NA	NA
6	IL_4V4T_006 ➜	1/AA/67:69,1/AA/99:102	NA	NA
7	IL_4V4T_007 ➜	1/AA/129:131,1/AA/231:232	NA	NA
8	IL_4V4T_008 ➜	1/AA/132:137,1/AA/226:230	NA	NA
9	IL_4V4T_009 ➜	1/AA/148:153,1/AA/168:174	NA	NA
10	IL_4V4T_010 ➜	1/AA/186:188,1/AA/190K:191	NA	NA
11	IL_4V4T_011 ➜	1/AA/242:247,1/AA/277:284	NA	NA
12	IL_4V4T_012 ➜	1/AA/248:252,1/AA/274:276	NA	NA
13	IL_4V4T_013 ➜	1/AA/291:293,1/AA/304:309	NA	NA
14	IL_4V4T_014 ➜	1/AA/367:369,1/AA/392:393	NA	NA
15	IL_4V4T_015 ➜	1/AA/371:375,1/AA/389:390	NA	NA
16	IL_4V4T_016 ➜	1/AA/375:376,1/AA/387:389	NA	NA
17	IL_4V4T_017 ➜	1/AA/409:416,1/AA/427:433	NA	NA
18	IL_4V4T_018 ➜	1/AA/446:450,1/AA/483:488	NA	NA
19	IL_4V4T_019 ➜	1/AA/450:455,1/AA/477:483	NA	NA
20	IL_4V4T_020 ➜	1/AA/504:512,1/AA/539:541	NA	NA
21	IL_4V4T_021 ➜	1/AA/515:521,1/AA/528:536	NA	NA
22	IL_4V4T_022 ➜	1/AA/580:584,1/AA/757:761	NA	NA
23	IL_4V4T_023 ➜	1/AA/594:596,1/AA/644:645	NA	NA
24	IL_4V4T_024 ➜	1/AA/597:598,1/AA/640:643	NA	NA
25	IL_4V4T_025 ➜	1/AA/605:612,1/AA/628:633	NA	NA
26	IL_4V4T_026 ➜	1/AA/654:655,1/AA/751:754	NA	NA
27	IL_4V4T_027 ➜	1/AA/657:658,1/AA/747:749	NA	NA
28	IL_4V4T_028 ➜	1/AA/661:666,1/AA/740:744	NA	NA
29	IL_4V4T_029 ➜	1/AA/673:677,1/AA/713:717	NA	NA
30	IL_4V4T_030 ➜	1/AA/683:688,1/AA/699:707	NA	NA
31	IL_4V4T_031 ➜	1/AA/774:778,1/AA/804:805	NA	NA
32	IL_4V4T_032 ➜	1/AA/779:783,1/AA/799:803	NA	NA
33	IL_4V4T_033 ➜	1/AA/887:894,1/AA/905:910	NA	NA
34	IL_4V4T_035 ➜	1/AA/925:927,1/AA/1390:1391	NA	NA
35	IL_4V4T_036 ➜	1/AA/933:935,1/AA/1380:1384	NA	NA
36	IL_4V4T_038 ➜	1/AA/1048:1050,1/AA/1208:1209	NA	NA
37	IL_4V4T_039 ➜	1/AA/1052:1056,1/AA/1204:1206	NA	NA
38	IL_4V4T_040 ➜	1/AA/1057:1058,1/AA/1199:1203	NA	NA
39	IL_4V4T_041 ➜	1/AA/1060:1061,1/AA/1195:1197	NA	NA
40	IL_4V4T_042 ➜	1/AA/1061:1063,1/AA/1193:1195	NA	NA
41	IL_4V4T_043 ➜	1/AA/1124:1127,1/AA/1145:1149	NA	NA
42	IL_4V4T_044 ➜	1/AA/1127:1132,1/AA/1142:1145	NA	NA
43	IL_4V4T_045 ➜	1/AA/1247:1253,1/AA/1284:1290	NA	NA
44	IL_4V4T_046 ➜	1/AA/1255:1258,1/AA/1277:1282	NA	NA
45	IL_4V4T_047 ➜	1/AA/1259:1262,1/AA/1273:1276	NA	NA
46	IL_4V4T_048 ➜	1/AA/1303:1308,1/AA/1329:1334	NA	NA
47	IL_4V4T_049 ➜	1/AA/1399:1401,1/AA/1501:1504	NA	NA
48	IL_4V4T_050 ➜	1/AA/1401:1404,1/AA/1497:1501	NA	NA
49	IL_4V4T_051 ➜	1/AA/1405:1407,1/AA/1494:1496	NA	NA
50	IL_4V4T_052 ➜	1/AA/1407:1409,1/AA/1491:1494	NA	NA
51	IL_4V4T_053 ➜	1/AA/1412:1414,1/AA/1486:1488	NA	NA
52	IL_4V4T_054 ➜	1/AA/1416:1419,1/AA/1481:1484	NA	NA
53	IL_4V4T_055 ➜	1/AA/1431:1435,1/AA/1466:1469	NA	NA
54	IL_4V4T_056 ➜	1/AA/1435:1437,1/AA/1464:1466	NA	NA
55	IL_4V4T_057 ➜	1/AA/1440:1447,1/AA/1459:1461	NA	NA
56	IL_4V4T_058 ➜	1/BA/24:30,1/BA/510:516	NA	NA
57	IL_4V4T_059 ➜	1/BA/35:36,1/BA/444:445	NA	NA
58	IL_4V4T_060 ➜	1/BA/36:37,1/BA/442:444	NA	NA
59	IL_4V4T_061 ➜	1/BA/43:44,1/BA/434:436	NA	NA
60	IL_4V4T_062 ➜	1/BA/81:85,1/BA/97:105	NA	NA
61	IL_4V4T_063 ➜	1/BA/183:184,1/BA/212:214	NA	NA
62	IL_4V4T_064 ➜	1/BA/188:194,1/BA/201:208	NA	NA
63	IL_4V4T_065 ➜	1/BA/239:245,1/BA/253:258	NA	NA
64	IL_4V4T_066 ➜	1/BA/273:273E,1/BA/363A:364	NA	NA
65	IL_4V4T_067 ➜	1/BA/286:292,1/BA/348:355	NA	NA
66	IL_4V4T_068 ➜	1/BA/292:296,1/BA/342:348	NA	NA
67	IL_4V4T_069 ➜	1/BA/672:678,1/BA/799:808	NA	NA
68	IL_4V4T_070 ➜	1/BA/697:698,1/BA/763:765	NA	NA
69	IL_4V4T_071 ➜	1/BA/702:703,1/BA/728:730	NA	NA
70	IL_4V4T_072 ➜	1/BA/703:707,1/BA/724:728	NA	NA
71	IL_4V4T_073 ➜	1/BA/737:741,1/BA/756:759	NA	NA
72	IL_4V4T_074 ➜	1/BA/837:838,1/BA/940:942	NA	NA
73	IL_4V4T_075 ➜	1/BA/844:850,1/BA/928:934	NA	NA
74	IL_4V4T_076 ➜	1/BA/858:862,1/BA/915:919	NA	NA
75	IL_4V4T_077 ➜	1/BA/862:863,1/BA/913:915	NA	NA
76	IL_4V4T_078 ➜	1/BA/864:868,1/BA/909:912	NA	NA
77	IL_4V4T_079 ➜	1/BA/875:879,1/BA/898:902	NA	NA
78	IL_4V4T_080 ➜	1/BA/880:882,1/BA/894:897	NA	NA
79	IL_4V4T_081 ➜	1/BA/952:954,1/BA/963:965	NA	NA
80	IL_4V4T_082 ➜	1/BA/992:996,1/BA/1159:1162	NA	NA
81	IL_4V4T_083 ➜	1/BA/998:1002,1/BA/1153:1157	NA	NA
82	IL_4V4T_084 ➜	1/BA/1004:1011,1/BA/1150:1151	NA	NA
83	IL_4V4T_085 ➜	1/BA/1011:1013,1/BA/1149:1150	NA	NA
84	IL_4V4T_086 ➜	1/BA/1018:1030,1/BA/1124:1144	NA	NA
85	IL_4V4T_087 ➜	1/BA/1031:1034,1/BA/1121:1123	NA	NA
86	IL_4V4T_088 ➜	1/BA/1042:1051,1/BA/1108:1113	NA	NA
87	IL_4V4T_089 ➜	1/BA/1059:1062,1/BA/1076:1079	NA	NA
88	IL_4V4T_090 ➜	1/BA/1196:1199,1/BA/1246:1250	NA	NA
89	IL_4V4T_091 ➜	1/BA/1200:1208,1/BA/1238:1245	NA	NA
90	IL_4V4T_092 ➜	1/BA/1208:1215,1/BA/1234:1238	NA	NA
91	IL_4V4T_093 ➜	1/BA/1219:1221,1/BA/1228:1230	NA	NA
92	IL_4V4T_094 ➜	1/BA/1319:1323,1/BA/1331:1333	NA	NA
93	IL_4V4T_095 ➜	1/BA/1351:1355,1/BA/1376:1380	NA	NA
94	IL_4V4T_096 ➜	1/BA/1356:1361,1/BA/1370:1375	NA	NA
95	IL_4V4T_097 ➜	1/BA/1414:1423,1/BA/1574:1588	NA	NA
96	IL_4V4T_098 ➜	1/BA/1432:1435,1/BA/1557:1561	NA	NA
97	IL_4V4T_099 ➜	1/BA/1436:1440,1/BA/1551:1556	NA	NA
98	IL_4V4T_100 ➜	1/BA/1448:1450,1/BA/1461:1463	NA	NA
99	IL_4V4T_101 ➜	1/BA/1651:1656,1/BA/2004:2006	NA	NA
100	IL_4V4T_102 ➜	1/BA/1662:1665,1/BA/1995:1998	NA	NA
101	IL_4V4T_103 ➜	1/BA/1666:1674,1/BA/1990:1994	NA	NA
102	IL_4V4T_104 ➜	1/BA/1686:1691,1/BA/1696:1702	NA	NA
103	IL_4V4T_105 ➜	1/BA/1770:1771,1/BA/1980:1982	NA	NA
104	IL_4V4T_106 ➜	1/BA/1798:1804,1/BA/1813:1821	NA	NA
105	IL_4V4T_107 ➜	1/BA/1837:1840,1/BA/1902:1903	NA	NA
106	IL_4V4T_108 ➜	1/BA/1841:1842,1/BA/1898:1901	NA	NA
107	IL_4V4T_109 ➜	1/BA/1846:1849,1/BA/1893:1894	NA	NA
108	IL_4V4T_110 ➜	1/BA/1851:1855,1/BA/1887:1891	NA	NA
109	IL_4V4T_111 ➜	1/BA/1856:1860,1/BA/1882:1886	NA	NA
110	IL_4V4T_112 ➜	1/BA/1933:1934,1/BA/1964:1967	NA	NA
111	IL_4V4T_113 ➜	1/BA/1934:1945,1/BA/1961:1964	NA	NA
112	IL_4V4T_114 ➜	1/BA/2050:2052,1/BA/2617:2618	NA	NA
113	IL_4V4T_115 ➜	1/BA/2066:2069,1/BA/2442:2444	NA	NA
114	IL_4V4T_116 ➜	1/BA/2070:2071,1/BA/2438:2441	NA	NA
115	IL_4V4T_117 ➜	1/BA/2081:2083,1/BA/2236:2239	NA	NA
116	IL_4V4T_118 ➜	1/BA/2085:2087,1/BA/2232:2234	NA	NA
117	IL_4V4T_119 ➜	1/BA/2350:2354,1/BA/2363:2367	NA	NA
118	IL_4V4T_120 ➜	1/BA/2400:2404,1/BA/2413:2416	NA	NA
119	IL_4V4T_121 ➜	1/BA/2454:2455,1/BA/2496:2498	NA	NA
120	IL_4V4T_122 ➜	1/BA/2456:2461,1/BA/2489:2495	NA	NA
121	IL_4V4T_123 ➜	1/BA/2466:2471,1/BA/2479:2484	NA	NA
122	IL_4V4T_124 ➜	1/BA/2510:2512,1/BA/2574:2578	NA	NA
123	IL_4V4T_125 ➜	1/BA/2512:2513,1/BA/2571:2574	NA	NA
124	IL_4V4T_126 ➜	1/BA/2521:2523,1/BA/2540:2544	NA	NA
125	IL_4V4T_127 ➜	1/BA/2591:2592,1/BA/2601:2603	NA	NA
126	IL_4V4T_128 ➜	1/BA/2636:2640,1/BA/2774:2782	NA	NA
127	IL_4V4T_129 ➜	1/BA/2680:2685,1/BA/2724:2727	NA	NA
128	IL_4V4T_130 ➜	1/BA/2686:2692,1/BA/2717:2723	NA	NA
129	IL_4V4T_131 ➜	1/BA/2695:2696,1/BA/2711:2714	NA	NA
130	IL_4V4T_132 ➜	1/BA/2737:2742,1/BA/2762:2767	NA	NA
131	IL_4V4T_133 ➜	1/BA/2838:2840,1/BA/2877:2880	NA	NA
132	IL_4V4T_134 ➜	1/BA/2843:2845,1/BA/2871:2874	NA	NA
133	IL_4V4T_135 ➜	1/BA/2845:2852,1/BA/2865:2871	NA	NA
134	IL_4V4T_136 ➜	1/BB/16:18,1/BB/65:68	NA	NA
135	IL_4V4T_137 ➜	1/BB/23:28,1/BB/56:60	NA	NA
136	IL_4V4T_138 ➜	1/BB/30:31,1/BB/51:54	NA	NA
137	IL_4V4T_139 ➜	1/BB/71:79,1/BB/97:105	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_4V4T_034 ➜	all high RSRZ	NA
2	IL_4V4T_037 ➜	all high RSRZ	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_4V4T_001 ➜	1/AA/46:47,1/AA/361:367,1/AA/393:395	NA	NA
2	J3_4V4T_002 ➜	1/AA/586:588,1/AA/651:654,1/AA/754:755	NA	NA
3	J3_4V4T_003 ➜	1/AA/672:673,1/AA/717:725,1/AA/732:734	NA	NA
4	J3_4V4T_004 ➜	1/AA/826:829,1/AA/857:861,1/AA/868:874	NA	NA
5	J3_4V4T_005 ➜	1/AA/943:947,1/AA/1234:1237,1/AA/1337:1340	NA	NA
6	J3_4V4T_006 ➜	1/AA/955:962,1/AA/973:984,1/AA/1221:1225	NA	NA
7	J3_4V4T_007 ➜	1/AA/990:998,1/AA/1043:1047,1/AA/1210:1215	NA	NA
8	J3_4V4T_009 ➜	1/AA/1063:1068,1/AA/1107:1113,1/AA/1187:1193	NA	NA
9	J3_4V4T_010 ➜	1/AA/1072:1074,1/AA/1083:1087,1/AA/1098:1103	NA	NA
10	J3_4V4T_011 ➜	1/AA/1116:1118,1/AA/1155:1161,1/AA/1175:1184	NA	NA
11	J3_4V4T_012 ➜	1/AA/1237:1241,1/AA/1296:1303,1/AA/1334:1337	NA	NA
12	J3_4V4T_013 ➜	1/BA/55:57,1/BA/70:76,1/BA/110:115	NA	NA
13	J3_4V4T_014 ➜	1/BA/683:689,1/BA/773:777,1/BA/787:794	NA	NA
14	J3_4V4T_015 ➜	1/BA/698:700,1/BA/732:737,1/BA/759:763	NA	NA
15	J3_4V4T_016 ➜	1/BA/1055:1057,1/BA/1081:1091,1/BA/1100:1104	NA	NA
16	J3_4V4T_017 ➜	1/BA/1298:1303,1/BA/1625:1627,1/BA/1639:1642	NA	NA
17	J3_4V4T_018 ➜	1/BA/1306:1309,1/BA/1605:1611,1/BA/1620:1622	NA	NA
18	J3_4V4T_019 ➜	1/BA/1344:1350,1/BA/1381:1385,1/BA/1402:1403	NA	NA
19	J3_4V4T_020 ➜	1/BA/2090:2093,1/BA/2196:2205,1/BA/2219:2229	NA	NA
20	J3_4V4T_021 ➜	1/BA/2282:2284,1/BA/2384:2397,1/BA/2419:2427	NA	NA
21	J3_4V4T_022 ➜	1/BA/2294:2299,1/BA/2317:2324,1/BA/2331:2338	NA	NA
22	J3_4V4T_023 ➜	1/BA/2517:2520,1/BA/2545:2547,1/BA/2561:2567	NA	NA
23	J3_4V4T_024 ➜	1/BA/2814:2815,1/BA/2831:2837,1/BA/2881:2886	NA	NA
24	J3_4V4T_025 ➜	1/BB/10:16,1/BB/68:69,1/BB/107:110	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	J3_4V4T_008 ➜	missing nts	NA

Coloring options: Nucleotide numbers

4V4T Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops