Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/E/38:45
geometric
HL_4V9F_006
NA

HL_23481.5*
1/E/69:74
homologous
HL_5TBW_002
NA

HL_96776.3*
1/E/90:96
homologous
HL_5TBW_003
NA

HL_67216.5*
1/E/132:136
homologous
HL_5TBW_004
NA

HL_36982.3*
1/E/194:201T-loop with 1 bulged base
homologous
HL_5TBW_005
NA

HL_68493.6*
1/E/208:212
homologous
HL_5TBW_006
NA

HL_98557.5*
1/E/216:224
homologous
HL_5TBW_007
NA

HL_08002.6*
1/E/278:287
homologous
HL_5TBW_008
NA

HL_54035.7*
1/E/303:312
homologous
HL_5TBW_009
NA

HL_46142.8*
1/E/357:362Other HL
homologous
HL_5TBW_010
NA

HL_43074.18*
1/E/382:387GNRA
homologous
HL_5TBW_011
NA

HL_43074.18*
1/E/543:548NANA
1/E/599:604GNRA
homologous
HL_5TBW_013
NA

HL_43074.18*
1/E/640:649T-loop with 2 stacked bulged bases
homologous
HL_5TBW_014
NA

HL_33239.17*
1/E/686:694
homologous
HL_5TBW_015
NA

HL_80105.3*
1/E/707:712GNRA
homologous
HL_5TBW_016
NA

HL_43074.18*
1/E/732:737GNRA
homologous
HL_5TBW_017
NA

HL_43074.18*
1/E/763:768
geometric
HL_5TBW_018
NA

HL_00996.1*
1/E/844:849GNRA
homologous
HL_5TBW_019
NA

HL_43074.18*
1/E/876:885
homologous
HL_5TBW_020
NA

HL_39334.5*
1/E/910:918
homologous
HL_5TBW_021
NA

HL_05832.1*
1/E/958:963
homologous
HL_5TBW_022
NA

HL_15942.5*
1/E/1023:1029GNRA
homologous
HL_5TBW_023
NA

HL_43074.18*
1/E/1076:1083
geometric
HL_5TBW_024
NA

HL_54035.7*
1/E/1126:1132GNRA
homologous
HL_5TBW_025
NA

HL_43074.18*
1/E/1148:1155
homologous
HL_5TBW_026
NA

HL_72451.5*
1/E/1239:1250NANA
1/E/1266:1275NANA
1/E/1347:1357
geometric
HL_4OOG_001
NA

HL_68529.2*
1/E/1403:1408GNRA
homologous
HL_5TBW_030
NA

HL_43074.18*
1/E/1462:1470T-loop with 2 stacked bulged bases
homologous
HL_5TBW_031
NA

HL_33239.17*
1/E/1506:1512
homologous
HL_5TBW_032
NA

HL_86880.5*
1/E/1544:1549Other HL
homologous
HL_5TBW_033
NA

HL_43074.18*
1/E/1565:1574NANA
1/E/1599:1608
homologous
HL_5TBW_035
NA

HL_78457.4*
1/E/1634:1639GNRA
homologous
HL_5TBW_036
NA

HL_43074.18*
1/E/1680:1688
homologous
HL_5TBW_037
NA

HL_73793.2*
1/E/1719:1725
homologous
HL_5TBW_038
NA

HL_00923.1*
1/E/1760:1765
geometric
HL_2Y9H_003
NA

HL_98557.5*
1/E/1792:1796
homologous
HL_5TBW_040
NA

HL_69353.7*
1/E/1844:1851
homologous
HL_5TBW_041
NA

HL_66171.3*
1/E/1862:1868GNRA with one bulged base
homologous
HL_5TBW_042
NA

HL_02361.6*
1/E/1923:1928UNCG
homologous
HL_5TBW_043
NA

HL_79299.11*
1/E/2110:2114
homologous
HL_5TBW_045
NA

HL_99223.1*
1/E/2135:2145
homologous
HL_5TBW_046
NA

HL_43613.4*
1/E/2164:2170GNRA
homologous
HL_5TBW_047
NA

HL_43074.18*
1/E/2220:2225Other HL
homologous
HL_5TBW_048
NA

HL_43074.18*
1/E/2253:2263
homologous
HL_5TBW_049
NA

HL_98248.1*
1/E/2292:2300
homologous
HL_5TBW_050
NA

HL_53760.4*
1/E/2369:2378
homologous
HL_5TBW_051
NA

HL_90642.5*
1/E/2535:2544NANA
1/E/2568:2573NANA
1/E/2616:2624
homologous
HL_5TBW_054
NA

HL_46891.3*
1/E/2633:2645
homologous
HL_5TBW_055
NA

HL_19870.5*
1/E/2673:2681
homologous
HL_5TBW_056
NA

HL_76406.3*
1/E/2693:2700
homologous
HL_5TBW_057
NA

HL_46142.8*
1/E/2724:2732
homologous
HL_5TBW_058
NA

HL_14725.1*
1/E/2744:2749GNRA
homologous
HL_5TBW_059
NA

HL_43074.18*
1/E/2776:2784
homologous
HL_5TBW_060
NA

HL_46142.8*
1/E/2840:2848
homologous
HL_5TBW_061
NA

HL_36421.5*
1/E/2897:2904
homologous
HL_5TBW_062
NA

HL_92681.5*
1/E/2920:2926
geometric
HL_5TBW_063
NA

HL_26055.6*
1/E/2963:2968GNRA
homologous
HL_5TBW_064
NA

HL_43074.18*
1/E/3025:3030GNRA
homologous
HL_5TBW_065
NA

HL_43074.18*
1/E/3068:3073Ribsomal LSU H95
homologous
HL_5TBW_066
NA

HL_67719.1*
1/E/3110:3124
homologous
HL_5TBW_067
NA

HL_56677.5*
1/E/3194:3197
geometric
HL_5TBW_068
NA

HL_46546.1*
1/E/3240:3247
homologous
HL_5TBW_069
NA

HL_27757.1*
1/E/3303:3311
geometric
HL_5TBW_070
NA

HL_05018.6*
1/E/3350:3353
geometric
HL_6JOO_002
NA

HL_69353.7*
1/F/36:41NANA
1/F/88:93NANA
1/G/47:56
geometric
HL_7A0S_001
NA

HL_29414.1*
1/G/69:89NANA
1/G/108:114
homologous
HL_5TBW_075
NA

HL_06569.2*
1/G/124:129
homologous
HL_5TBW_076
NA

HL_60357.1*

Problematic loops

#loop idProblemSequence
HL_7AZY_044
geometric
HL_7RQB_011

Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/E/7:8,
1/G/150:152
Single bulged C
homologous
IL_5TBW_002
NA

IL_61258.10*
1/E/13:15,
1/G/144:145
Single bulged U
homologous
IL_5TBW_003
NA

IL_83039.11*
1/E/27:28,
1/E/56:58
Single stack bend
homologous
IL_5TBW_004
NA

IL_04038.4*
1/E/31:38,
1/E/45:53
tSH-tHW-tHH-tHS
homologous
IL_5TBW_005
NA

IL_22863.1*
1/E/82:89,
1/E/97:103

homologous
IL_5TBW_006
NA

IL_29509.1*
1/E/123:124,
1/E/144:149

geometric
IL_5TBW_007
NA

IL_19724.1*
1/E/125:127,
1/E/141:143

homologous
IL_5TBW_008
NA

IL_01312.13*
1/E/163:165,
1/E/257:258
Single stack bend
homologous
IL_5TBW_009
NA

IL_04038.4*
1/E/169:170,
1/E/248:253

homologous
IL_5TBW_010
NA

IL_76195.1*
1/E/177:178,
1/E/238:241
Minor groove platform
geometric
IL_4KQY_004
NA

IL_95601.1*
1/E/189:191,
1/E/204:205
Single bulged U
homologous
IL_5TBW_012
NA

IL_83039.11*
1/E/337:339,
1/G/25:26
Single bulged A
homologous
IL_5TBW_013
NA

IL_80007.16*
1/E/376:379,
1/E/390:403

homologous
IL_5TBW_014
NA

IL_60992.5*
1/E/404:410,
1/G/13:19
Triple sheared with non-canonical cWW
homologous
IL_5TBW_015
NA

IL_66414.5*
1/E/429:431,
1/E/628:630

homologous
IL_5TBW_016
NA

IL_01312.13*
1/E/512:513,
1/E/577:579
Single bulged A
homologous
IL_5TBW_018
NA

IL_40508.4*
1/E/517:525,
1/E/567:573

homologous
IL_5TBW_019
NA

IL_41593.1*
1/E/531:538,
1/E/553:561

homologous
IL_5TBW_020
NA

IL_94501.1*
1/E/668:670,
1/E/792:794

homologous
IL_5TBW_021
NA

IL_01312.13*
1/E/680:684,
1/E/696:700

homologous
IL_5TBW_022
NA

IL_92343.1*
1/E/725:728,
1/E/741:745
UAA/GAN
homologous
IL_5TBW_023
NA

IL_53523.5*
1/E/752:753,
1/E/779:781
Single bulged A
homologous
IL_5TBW_024
NA

IL_80007.16*
1/E/755:756,
1/E/775:777
Single bulged U
homologous
IL_5TBW_025
NA

IL_83039.11*
1/E/758:763,
1/E/768:773

homologous
IL_5TBW_026
NA

IL_19954.1*
1/E/803:805,
1/E/938:940

homologous
IL_5TBW_027
NA

IL_01312.13*
1/E/805:809,
1/E/931:938

geometric
IL_5TBW_028
NA

IL_17470.5*
1/E/833:834,
1/E/859:861
Single bulged G
homologous
IL_5TBW_029
NA

IL_99645.1*
1/E/834:838,
1/E/855:859
Triple sheared
geometric
IL_5J7L_263
NA

IL_56467.6*
1/E/869:872,
1/E/888:890
Major groove platform with extra cWW
homologous
IL_5TBW_031
NA

IL_95485.6*
1/E/873:875,
1/E/886:887
Single bulged U
homologous
IL_5TBW_032
NA

IL_83039.11*
1/E/907:909,
1/E/919:923
Multiple bulged bases
geometric
IL_5TBW_033
NA

IL_90991.5*
1/E/954:956,
1/E/965:967

homologous
IL_5TBW_034
NA

IL_01312.13*
1/E/969:970,
1/E/1111:1113
Single stack bend
homologous
IL_5TBW_035
NA

IL_04038.4*
1/E/977:982,
1/E/1101:1104
NANA
1/E/983:985,
1/E/1099:1100
Single bulged G
homologous
IL_5TBW_037
NA

IL_59137.10*
1/E/991:997,
1/E/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_5TBW_038
NA

IL_93830.2*
1/E/997:998,
1/E/1050:1052
Minor groove platform
homologous
IL_5TBW_039
NA

IL_06437.11*
1/E/999:1004,
1/E/1046:1049
C-loop
homologous
IL_5TBW_040
NA

IL_63596.4*
1/E/1006:1009,
1/E/1041:1044
Tandem non-canonical cWW pairs
homologous
IL_5TBW_041
NA

IL_85877.10*
1/E/1009:1011,
1/E/1039:1041

geometric
IL_5J7L_061
NA

IL_01312.13*
1/E/1013:1018,
1/E/1034:1037
Other IL
homologous
IL_5TBW_043
NA

IL_08757.3*
1/E/1069:1071,
1/E/1087:1089

homologous
IL_5TBW_044
NA

IL_01312.13*
1/E/1074:1076,
1/E/1083:1084
Single bulged A
homologous
IL_5TBW_045
NA

IL_80007.16*
1/E/1120:1122,
1/E/1136:1138

homologous
IL_5TBW_046
NA

IL_01312.13*
1/E/1167:1171,
1/E/1328:1332
UAA/GAN
homologous
IL_5TBW_048
NA

IL_53523.5*
1/E/1173:1180,
1/E/1325:1326
SSU/LSU pseudoknot
homologous
IL_5TBW_049
NA

IL_15861.6*
1/E/1180:1182,
1/E/1324:1325
Single bulged U
geometric
IL_5TBW_050
NA

IL_83039.11*
1/E/1187:1194,
1/E/1314:1319

geometric
IL_5TBW_051
NA

IL_17971.1*
1/E/1194:1205,
1/E/1299:1314

homologous
IL_5TBW_052
NA

IL_94878.1*
1/E/1207:1209,
1/E/1296:1297
Single bulged U
homologous
IL_5TBW_053
NA

IL_83039.11*
1/E/1218:1226,
1/E/1283:1287
Kink-turn
homologous
IL_5TBW_054
NA

IL_90538.3*
1/E/1233:1239,
1/E/1250:1255
NANA
1/E/1262:1266,
1/E/1275:1277
Major groove platform with extra cWW
homologous
IL_5TBW_056
NA

IL_95485.6*
1/E/1376:1378,
1/E/1428:1431
Isolated cWS basepair
homologous
IL_5TBW_057
NA

IL_01312.13*
1/E/1385:1387,
1/E/1420:1421
Single bulged A
homologous
IL_5TBW_058
NA

IL_80007.16*
1/E/1388:1395,
1/E/1415:1419
Kink-turn
homologous
IL_5TBW_059
NA

IL_29549.9*
1/E/1398:1400,
1/E/1411:1412
Single bulged A
homologous
IL_5TBW_060
NA

IL_80007.16*
1/E/1444:1450,
1/E/2354:2359
7x6 Sarcin-Ricin; G-bulge
homologous
IL_5TBW_061
NA

IL_35110.5*
1/E/1501:1505,
1/E/1513:1515
Major groove minor groove platform with tHH
geometric
IL_4WF9_050
NA

IL_28060.3*
1/E/1532:1536,
1/E/1585:1590
UAA/GAN
homologous
IL_5TBW_063
NA

IL_53523.5*
1/E/1561:1563,
1/E/1577:1578
Single stack bend
geometric
IL_4LFB_041
NA

IL_04038.4*
1/E/1563:1565,
1/E/1574:1577
NANA
1/E/1618:1621,
1/E/1824:1826
Other IL
homologous
IL_5TBW_064
NA

IL_87630.5*
1/E/1623:1624,
1/E/1819:1822
Multiple bulged bases
geometric
IL_4V9F_021
NA

IL_13730.12*
1/E/1624:1631,
1/E/1811:1819
NANA
1/E/1645:1649,
1/E/1806:1810
Triple sheared
geometric
IL_5TBW_067
NA

IL_56467.6*
1/E/1661:1663,
1/E/1786:1788

homologous
IL_5TBW_068
NA

IL_01312.13*
1/E/1669:1670,
1/E/1778:1780
Single bulged C
geometric
IL_5TBW_069
NA

IL_61258.10*
1/E/1670:1671,
1/E/1776:1778
Single stack bend
homologous
IL_5TBW_070
NA

IL_72766.2*
1/E/1694:1698,
1/E/1747:1752

homologous
IL_5TBW_071
NA

IL_14397.1*
1/E/1702:1707,
1/E/1737:1743

homologous
IL_5TBW_072
NA

IL_98876.1*
1/E/1711:1717,
1/E/1727:1733
Kink-turn
homologous
IL_5TBW_073
NA

IL_76900.1*
1/E/1883:1889,
1/E/2346:2349

homologous
IL_5TBW_074
NA

IL_79393.8*
1/E/1895:1897,
1/E/2338:2340
Isolated tWW turn
homologous
IL_5TBW_075
NA

IL_54997.5*
1/E/1898:1901,
1/E/2336:2337
Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA

IL_80663.10*
1/E/1901:1906,
1/E/2333:2336
Intercalated tWH
homologous
IL_5TBW_077
NA

IL_98882.3*
1/E/1918:1923,
1/E/1928:1934
tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
NA

IL_66584.5*
1/E/1940:1942,
1/E/2106:2108

homologous
IL_5TBW_079
NA

IL_01312.13*
1/E/1947:1948,
1/E/2098:2101

homologous
IL_5TBW_080
NA

IL_76195.1*
1/E/2128:2129,
1/E/2323:2325
Single bulged A
homologous
IL_5TBW_082
NA

IL_80007.16*
1/E/2156:2161,
1/E/2173:2180
Kink-turn related
homologous
IL_5TBW_083
NA

IL_95993.1*
1/E/2196:2199,
1/E/2245:2246
Major groove outside cWW, minor groove, intercalation pocket
homologous
IL_5TBW_084
NA

IL_72766.2*
1/E/2200:2201,
1/E/2241:2244
Major groove outside cWW, minor groove, intercalation pocket
homologous
IL_5TBW_085
NA

IL_13730.12*
1/E/2204:2206,
1/E/2237:2238
Single bulged U
homologous
IL_5TBW_086
NA

IL_21340.1*
1/E/2206:2210,
1/E/2235:2237
Major groove platform with extra pair
geometric
IL_5TBW_087
NA

IL_87630.5*
1/E/2211:2217,
1/E/2228:2234

homologous
IL_5TBW_088
NA

IL_36973.5*
1/E/2276:2277,
1/E/2307:2310
Multiple bulged bases
homologous
IL_5TBW_089
NA

IL_69632.1*
1/E/2277:2288,
1/E/2304:2307

geometric
IL_5TBW_090
NA

IL_45481.1*
1/E/2391:2394,
1/E/2986:2988
Major groove platform with extra pair
homologous
IL_5TBW_091
NA

IL_87630.5*
1/E/2396:2398,
1/E/2981:2984
Minor groove platform with intercalation
homologous
IL_5TBW_092
NA

IL_86964.1*
1/E/2409:2411,
1/E/2811:2812
Single bulged U
homologous
IL_5TBW_093
NA

IL_83039.11*
1/E/2412:2413,
1/E/2807:2810
Minor groove platform
homologous
IL_5TBW_094
NA

IL_06437.11*
1/E/2423:2425,
1/E/2604:2607
Isolated tHS basepair with bulges
homologous
IL_5TBW_095
NA

IL_38958.6*
1/E/2444:2446,
1/E/2500:2503
NANA
1/E/2520:2526,
1/E/2584:2587

homologous
IL_5TBW_096
NA

IL_98353.1*
1/E/2614:2615,
1/E/2625:2627
Single bulged A
homologous
IL_5TBW_098
NA

IL_80007.16*
1/E/2666:2668,
1/E/2686:2690
Isolated tHS basepair with bulges
homologous
IL_5TBW_099
NA

IL_38958.6*
1/E/2718:2721,
1/E/2735:2738
Tandem non-canonical cWW pairs
homologous
IL_5TBW_100
NA

IL_85877.10*
1/E/2770:2773,
1/E/2787:2788
Single stack bend with bulge
homologous
IL_5TBW_101
NA

IL_31836.1*
1/E/2823:2824,
1/E/2865:2867
Major groove platform
homologous
IL_5TBW_102
NA

IL_80663.10*
1/E/2824:2826,
1/E/2863:2865

geometric
IL_5TBW_103
NA

IL_05265.1*
1/E/2826:2828,
1/E/2862:2863
Major groove platform
geometric
IL_5TBW_104
NA

IL_80663.10*
1/E/2828:2830,
1/E/2858:2862

homologous
IL_5TBW_105
NA

IL_07931.5*
1/E/2835:2839,
1/E/2849:2853
Triple sheared
homologous
IL_5TBW_106
NA

IL_56467.6*
1/E/2876:2877,
1/E/2949:2951
Major groove platform
homologous
IL_5TBW_107
NA

IL_80663.10*
1/E/2879:2881,
1/E/2943:2947
Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA

IL_01312.13*
1/E/2881:2882,
1/E/2940:2943
Multiple bulged bases
homologous
IL_5TBW_109
NA

IL_13730.12*
1/E/2889:2891,
1/E/2912:2914

geometric
IL_5TBW_110
NA

IL_01312.13*
1/E/2891:2892,
1/E/2909:2912
Minor groove platform with intercalation
homologous
IL_5TBW_111
NA

IL_95601.1*
1/E/2918:2920,
1/E/2926:2928

homologous
IL_5TBW_112
NA

IL_01312.13*
1/E/2960:2961,
1/E/2970:2972
Single bulged A
geometric
IL_7RQB_101
NA

IL_80007.16*
1/E/3004:3007,
1/E/3139:3144
Double sheared
homologous
IL_5TBW_114
NA

IL_09705.7*
1/E/3012:3014,
1/E/3040:3042

homologous
IL_5TBW_115
NA

IL_01312.13*
1/E/3018:3025,
1/E/3030:3036
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_116
NA

IL_04346.5*
1/E/3046:3051,
1/E/3091:3095
NANA
1/E/3054:3059,
1/E/3084:3088
UAA/GAN related
homologous
IL_5TBW_118
NA

IL_53523.5*
1/E/3063:3064,
1/E/3077:3080
Multiple bulged bases
homologous
IL_5TBW_119
NA

IL_13730.12*
1/E/3103:3107,
1/E/3127:3131
UAA/GAN
homologous
IL_5TBW_120
NA

IL_53523.5*
1/E/3164:3166,
1/E/3284:3286

geometric
IL_4WF9_083
NA

IL_01312.13*
1/E/3168:3170,
1/E/3280:3282

homologous
IL_5TBW_122
NA

IL_01312.13*
1/E/3177:3179,
1/E/3210:3211
Single bulged A
geometric
IL_5TBW_123
NA

IL_80007.16*
1/E/3179:3188,
1/E/3204:3210

homologous
IL_5TBW_124
NA

IL_56867.1*
1/E/3193:3194,
1/E/3197:3199
Single bulged U
homologous
IL_5TBW_125
NA

IL_83039.11*
1/E/3225:3229,
1/E/3258:3260

homologous
IL_5TBW_126
NA

IL_50789.1*
1/E/3233:3235,
1/E/3252:3254

geometric
IL_4M4O_002
NA

IL_01312.13*
1/E/3235:3238,
1/E/3249:3252
Tandem non-canonical cWW pairs
homologous
IL_5TBW_128
NA

IL_85877.10*
1/E/3300:3303,
1/E/3311:3314
Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA

IL_85877.10*
1/E/3318:3320,
1/E/3387:3388
Single bulged U
geometric
IL_5J7L_298
NA

IL_83039.11*
1/E/3324:3325,
1/E/3381:3383
Single bulged U
homologous
IL_5TBW_131
NA

IL_21340.1*
1/E/3328:3330,
1/E/3373:3378
Isolated non-canonical cWW with bulges
homologous
IL_5TBW_132
NA

IL_55456.1*
1/E/3332:3337,
1/E/3367:3371

homologous
IL_5TBW_133
NA

IL_47002.1*
1/E/3340:3342,
1/E/3363:3364
Single bulged U
geometric
IL_5TBW_134
NA

IL_83039.11*
1/E/3342:3345,
1/E/3360:3363
tWS-tSW
homologous
IL_5TBW_135
NA

IL_09705.7*
1/E/3349:3350,
1/E/3353:3356
Multiple bulged bases
homologous
IL_5TBW_136
NA

IL_13730.12*
1/F/15:16,
1/F/63:65
NANA
1/F/21:27,
1/F/53:58
NANA
1/F/28:29,
1/F/49:52
NANA
1/F/29:30,
1/F/47:49
NANA
1/F/32:36,
1/F/41:45
NANA
1/F/72:80,
1/F/100:106
NANA
1/F/84:87,
1/F/94:96
NANA
1/G/64:66,
1/G/93:96
Isolated non-canonical cWW with bulges
geometric
IL_5TBW_145
NA

IL_55456.1*
1/G/68:69,
1/G/89:91
Single bulged U
homologous
IL_5TBW_146
NA

IL_83039.11*

Problematic loops

#loop idProblemSequence
IL_7AZY_016
homologous
IL_5TBW_017

Valid loops

#loop idlocationannotation
(mapped to, source)
motif group
(similar to)
1/E/113:123,
1/E/149:158,
1/E/263:267

homologous
J3_5TBW_001
NA
1/E/369:376,
1/E/403:404,
1/G/19:20
NANA
1/E/502:503,
1/E/588:597,
1/E/606:611

homologous
J3_5TBW_003
NA
1/E/814:820,
1/E/905:907,
1/E/923:926

homologous
J3_5TBW_004
NA
1/E/828:831,
1/E/863:867,
1/E/892:897

homologous
J3_5TBW_005
NA
1/E/986:987,
1/E/1062:1066,
1/E/1092:1098

homologous
J3_5TBW_006
NA
1/E/1230:1232,
1/E/1256:1262,
1/E/1277:1279
NANA
1/E/1479:1485,
1/E/1857:1859,
1/E/1871:1874

homologous
J3_5TBW_008
NA
1/E/1488:1491,
1/E/1837:1843,
1/E/1852:1854

homologous
J3_5TBW_009
NA
1/E/1526:1531,
1/E/1591:1595,
1/E/1612:1613

homologous
J3_5TBW_010
NA
1/E/1631:1632,
1/E/1641:1645,
1/E/1810:1811
NANA
1/E/2432:2435,
1/E/2512:2517,
1/E/2590:2597

homologous
J3_5TBW_012
NA
1/E/2529:2532,
1/E/2547:2563,
1/E/2578:2581
NANA
1/E/2664:2666,
1/E/2690:2692,
1/E/2701:2706
NANA
1/E/2886:2889,
1/E/2914:2916,
1/E/2930:2936

homologous
J3_5TBW_014
NA
1/E/3298:3300,
1/E/3314:3318,
1/E/3388:3390

homologous
J3_5TBW_015
NA
1/F/9:14,
1/F/66:67,
1/F/111:112
NANA
1/G/44:45,
1/G/58:64,
1/G/96:100
NANA

Problematic loops

No problematic loops


Coloring options:
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