Internal Loop Motif Atlas Release 3.9

#	Motif	Core Nts	Instances
1	IL_48459.4 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (192) Isolated cWH basepair (11) Isolated non-canonical cWW with bulges (7) Intercalated tWH (3) Isolated near basepair (2) Isolated non-canonical cWW contact (2) Decoding loop related (1) Self complementary (1) Single bulged G, near cWW (1) Other IL (1) Multiple bulged bases, near cWW (1) Isolated cWS basepair (1)	6	307
2	IL_20868.3 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged A (85) Major groove intercalation (5) Stack outside cWW (4) Multiple bulged bases (4) Major groove platform (1)	4	121
3	IL_83039.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged U (61) Major groove intercalation (3) Multiple bulged bases (2) Bulged stacked bases (2)	4	89
4	IL_85877.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (64) Non canonical cWW and near pair (2)	8	68
5	IL_80663.2 View exemplar Basepair signature: cWW-tHS-cSH-cWW History status: Exact match Major groove platform (27) Major groove platform; stack outside cWW (9) Major groove intercalation (1)	5	56
6	IL_11156.3 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Single stack bend (18) Decoding loop related (11) Stack and bulge (2) Single stack bend with SAM intercalation (2) Intercalated cWW (1) Not an internal loop (1)	5	52
7	IL_06437.2 View exemplar Basepair signature: cWW-tSH-cWW History status: Exact match Minor groove platform (45) Single bulged A (2) Minor groove platform related (1) Minor groove platform, major groove intercalation (1)	5	49
8	IL_13730.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (26) Major groove intercalation (6)	4	42
9	IL_12786.2 View exemplar Basepair signature: cWW-cWH-cWW History status: Exact match Isolated cWH basepair (31) Self complementary (2) Isolated near basepair (2) Isolated non-canonical cWW pair (2) cWH basepair with bulged bases (1) Other IL (1)	6	41
10	IL_56467.2 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: Exact match Triple sheared (26) Double sheared with non-canonical cWW (7) AAA cross-strand stack (5)	10	38
11	IL_61258.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged C (30) SSU/LSU pseudoknot (2)	4	37
12	IL_29549.2 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-tHS-cWW History status: Exact match Kink-turn (32) Kink-turn with non-sequential stacking (4)	12	36
13	IL_92039.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (29) Major groove intercalation (1) Single bulged A (1) Multiple bulged bases (1)	4	35
14	IL_09705.2 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (29) Other IL (2) Double sheared; A in syn (1)	8	32
15	IL_53523.2 View exemplar Basepair signature: cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN (18) UAA/GAN variation (3) UAA/GAN related (2)	9	23
16	IL_75892.1 View exemplar Basepair signature: cWW-tWH-cSH-L-cWS-cWW History status: Exact match C-loop (21) C-loop with bulged stacked A's (1)	7	23
17	IL_00168.2 View exemplar Basepair signature: cWW-cSW-cWW History status: Exact match Major groove minor groove platform; mini C-loop (12) Major groove intercalation (2) Minor groove platform, major groove intercalation (1)	6	20
18	IL_95485.2 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Major groove platform with extra cWW (8) Isolated basepair with bulged bases (1) Major groove minor groove platform with extra cWW (1)	7	18
19	IL_70995.1 View exemplar Basepair signature: cWW-tSH-L-cWW History status: Exact match Major groove platform; stack outside cWW (11)	6	17
20	IL_04346.2 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (17)	15	17
21	IL_39521.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-cWW History status: Exact match tSH-tHW-tHS (15) 5x5 Sarcin-Ricin with intercalated A; G-bulge (1)	10	16
22	IL_35110.2 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (10) Sarcin-Ricin target in LSU H95; G-bulge (5)	13	15
23	IL_87630.1 View exemplar Basepair signature: cWW-tSH-cSH-cWW History status: Exact match Major groove platform with extra pair (10) Other IL (1)	7	15
24	IL_10277.2 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Not an internal loop (2) Minor groove platform (2) Minor groove platform, major groove intercalation (1) Single stack bend (1) Major groove intercalation (1)	5	15
25	IL_81326.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Decoding loop related (2)	7	14
26	IL_37811.2 View exemplar Basepair signature: cWW-R-tSH-tHS-cWW History status: Exact match UAA/GAN related (7) UAA/GAN variation (3) Tandem non-canonical cWW pairs (2) Minor groove platform related (1)	9	13
27	IL_38958.2 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated tHS basepair with bulges (13)	6	13
28	IL_67621.2 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match Isolated cWS basepair (8) Isolated near basepair (2)	6	13
29	IL_50676.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (5) Pseudoknot (3) Other IL (1)	8	13
30	IL_09818.2 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Major groove platform with intercalation (5) Minor groove platform (2) Other IL (1)	5	12
31	IL_97601.2 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (8) 8-nt loop receptor (2) Other IL (1)	8	11
32	IL_49607.3 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (6) Other IL (1)	8	10
33	IL_35167.1 View exemplar Basepair signature: cWW-R-tWH-L-tHS-cWW History status: Exact match UAA/GAN (2) UAA/GAN with extra stack (1) Other IL (1) tSH-tHS-tHW (1)	10	10
34	IL_31933.2 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (4) Decoding loop with one bulged A (1)	6	10
35	IL_94431.1 View exemplar Basepair signature: cWW-cSH-cWS-cWW History status: Exact match Minor groove platform (9)	6	10
36	IL_15861.2 View exemplar Basepair signature: cWW-L-L-L-cSH-L-cWW History status: Exact match SSU/LSU pseudoknot (9)	10	9
37	IL_34153.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Major groove intercalation (4) Single bulged A (2)	4	9
38	IL_91481.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match Major groove minor groove platform with extra cWW (3) Minor groove platform with extra cWW (1) Isolated basepair with bulged bases (1)	8	9
39	IL_66414.2 View exemplar Basepair signature: cWW-cWW-tSH-tHS-tHS-L-R-cWW History status: Exact match Triple sheared with non-canonical cWW (4)	14	8
40	IL_66584.2 View exemplar Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW History status: Exact match tSH-tSH-tHH-tHS (3) Quadruple sheared (2)	12	8
41	IL_15944.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (2) Intercalated tWH (1)	6	8
42	IL_48233.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs with near WC pairs (1)	12	8
43	IL_81328.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Major groove intercalation (5) Single stack bend (1) Stack outside cWW (1)	5	8
44	IL_36612.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged U (4) Bulged stacked bases (2)	4	8
45	IL_19389.1 View exemplar Basepair signature: cWW-L-cSH-cWW History status: Exact match Major groove platform with intercalated tWH (5) Left turn (2)	6	8
46	IL_17470.2 View exemplar Basepair signature: cWW-R-tHW-tHW-tWW-cWW History status: Exact match tHW-tHW cross-strand stack (7)	11	7
47	IL_81442.2 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Intercalated cWS (2) Single base bend (1) 90 degree turn (1)	5	7
48	IL_90991.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (4)	4	7
49	IL_40979.2 View exemplar Basepair signature: cWW-cWW-tWW-cWW History status: Exact match tWW and non-canonical cWW (6)	8	7
50	IL_58103.2 View exemplar Basepair signature: cWW-cSH-L-cWS-tSW-R-R-cWW History status: Exact match Symmetric double minor groove platform (5)	10	7
51	IL_29978.1 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW History status: Exact match	9	6
52	IL_49767.1 View exemplar Basepair signature: cWW-cWW-R-tWH-L-tHS-cWW History status: Exact match UAA/GAN with extra cWW (3)	12	6
53	IL_47154.1 View exemplar Basepair signature: cWW-cSW-L-R-cWW History status: Exact match	8	6
54	IL_56455.1 View exemplar Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW History status: Exact match Bacterial 5S Loop E (6)	18	6
55	IL_14148.2 View exemplar Basepair signature: cWW-cWW-tSH-cWW History status: Exact match Minor groove platform with extra cWW (4)	7	6
56	IL_60992.2 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW History status: Exact match	16	6
57	IL_34915.1 View exemplar Basepair signature: cWW-R-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (6)	9	6
58	IL_51265.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW History status: Exact match Kink-turn from U4 (5) Kink-turn from T-box riboswitch (1)	10	6
59	IL_94518.1 View exemplar Basepair signature: cWW-L-R-cWW-L-R-cWW-cWW History status: Exact match Other IL (1) Double sheared; A in syn; two near cWW pairs (1)	12	5
60	IL_23544.1 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	5
61	IL_55953.1 View exemplar Basepair signature: cWW-tSH-R-tHS-L-bif-cWW History status: Exact match	12	5
62	IL_50157.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: Exact match Triple non-canonical cWW pairs (1)	10	5
63	IL_18776.1 View exemplar Basepair signature: cWW-cWW-cSW-cWW-cWW History status: Exact match Minor groove platform related (1)	9	5
64	IL_81168.2 View exemplar Basepair signature: cWW-cSH-R-cWW-cWW History status: Exact match Other IL (1)	8	5
65	IL_83162.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: Exact match tHS double platform (3)	11	5
66	IL_50587.2 View exemplar Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS-cWW (3)	12	5
67	IL_14076.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Decoding loop related (2)	5	5
68	IL_49053.1 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Single bulged A (1) Minor groove platform (1)	5	5
69	IL_22868.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (2)	6	5
70	IL_57188.1 View exemplar Basepair signature: cWW-tWW-cSH-L-tWW-cSH-cWW History status: Exact match Kink-turn related (3)	11	5
71	IL_17069.1 View exemplar Basepair signature: cWW-cSS-tSS-tHH-tWW-tHH-tHS-cWW History status: Exact match Kink-turn related (3)	13	5
72	IL_22955.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Bulged stacked bases (1)	4	5
73	IL_08296.1 View exemplar Basepair signature: cWW-tSH-R-R-cWW History status: Exact match UAA/GAN related, with intercalation (2)	8	4
74	IL_08376.1 View exemplar Basepair signature: cWW-tWH-tSW-L-cWS-cWW History status: Exact match C-loop (4)	7	4
75	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match Reverse turn (4)	11	4
76	IL_45944.2 View exemplar Basepair signature: cWW-L-L-tWH-L-L-L-cWW History status: Exact match	11	4
77	IL_38680.1 View exemplar Basepair signature: cWW-tSH-tHS-tHS-L-R-cWW History status: Exact match	12	4
78	IL_90538.2 View exemplar Basepair signature: cWW-tSS-L-tSH-tSS-tHS-L-R-L-cWW History status: Exact match Kink-turn (4)	13	4
79	IL_09732.1 View exemplar Basepair signature: cWW-cWW-R-cWW History status: Exact match	7	4
80	IL_67474.2 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match 180 degree turn (2)	6	4
81	IL_23825.2 View exemplar Basepair signature: cWW-cSH-R-R-cWW History status: Exact match	7	4
82	IL_87876.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged U (2)	4	4
83	IL_34626.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Isolated non-canonical cWW pair (1)	7	4
84	IL_60695.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	4
85	IL_79393.2 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW-cWW History status: Exact match	11	4
86	IL_88325.1 View exemplar Basepair signature: cWW-cHH-cWW History status: Exact match Major groove platform (2)	5	4
87	IL_68506.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW History status: Exact match	17	4
88	IL_07527.1 View exemplar Basepair signature: cWW-L-R-R-cWW-cWW History status: Exact match Multiple bulged bases with near cWW (1)	9	4
89	IL_44735.1 View exemplar Basepair signature: cWW-L-R-R-cSH-cWW History status: Exact match	8	3
90	IL_74051.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L History status: Exact match Kink-turn (3)	11	3
91	IL_90106.3 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: Exact match	8	3
92	IL_82426.2 View exemplar Basepair signature: cWW-tSW-cWH-cHW-cWH-L-cHW-R-cWW History status: Exact match Part of G-quadruplex (2)	14	3
93	IL_85881.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Multiple bulged bases (1)	5	3
94	IL_05062.3 View exemplar Basepair signature: cWW-tSH-tSH-L-R-L-cWW History status: Exact match Triple sheared related (3)	11	3
95	IL_33662.2 View exemplar Basepair signature: cWW-L-tSS-cHW-L-L-L-L-L-cWW History status: Exact match	13	3
96	IL_58960.1 View exemplar Basepair signature: cWW-L-cWW-L-tWW-L-R-L History status: Exact match	11	3
97	IL_08966.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated non-canonical cWW pair (1) Isolated non-canonical cWW contact (1)	6	3
98	IL_38634.2 View exemplar Basepair signature: cWW-cWH-tWS-cWW History status: Exact match cWH basepair and non-canonical AC (3)	8	3
99	IL_66750.2 View exemplar Basepair signature: cWW-cWW-bif-cSH-R-cWW History status: Exact match Major groove minor groove platform with extra cWW (2)	8	3
100	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (3)	12	3
101	IL_27393.3 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	3
102	IL_35422.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (1) Isolated non-canonical cWW pair (1)	6	3
103	IL_52451.3 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: Exact match	8	3
104	IL_90600.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	3
105	IL_35904.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW History status: Exact match Kink-turn (3)	12	3
106	IL_22310.1 View exemplar Basepair signature: cWW-L-R-tSH-tHS-L-R-L-cWW History status: Exact match	13	3
107	IL_78399.1 View exemplar Basepair signature: cWW-cWW-L-cWW-cWW-cWW History status: Exact match	11	3
108	IL_28060.2 View exemplar Basepair signature: cWW-tHH-L-cWS-R-cWW History status: Exact match Major groove minor groove platform with tHH (2)	8	3
109	IL_36143.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	5	3
110	IL_75283.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW History status: Exact match Kink-turn related (1)	18	3
111	IL_93830.2 View exemplar Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)	14	3
112	IL_48280.1 View exemplar Basepair signature: cWW-tSH-R-cWW History status: Exact match	7	3
113	IL_54678.1 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	3
114	IL_02349.2 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (3)	13	3
115	IL_24606.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)	14	3
116	IL_44060.2 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW History status: Exact match Kink-turn (3)	12	3
117	IL_75461.1 View exemplar Basepair signature: cWW-tSS-cSS-L-R-cWW History status: Exact match 180 degree turn (3)	7	3
118	IL_68057.1 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW History status: Exact match Kink-turn (3)	12	3
119	IL_44161.1 View exemplar Basepair signature: cWW-tSH-R-tHS-cWW History status: Exact match UAA/GAN variation (2)	9	3
120	IL_36973.2 View exemplar Basepair signature: cWW-tSH-L-R-R-R-L-L-cWW-cWW History status: Exact match	14	3
121	IL_37794.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-cWW-cWW History status: Exact match Triple sheared related (1)	12	3
122	IL_55482.3 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	3
123	IL_32889.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	3
124	IL_68780.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW History status: Exact match Kink-turn (3)	12	3
125	IL_25657.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: Exact match Pseudoknot (1)	13	2
126	IL_92209.1 View exemplar Basepair signature: cWW-cWW-L-R-tSH-cWW-cWW History status: Exact match Other IL (1)	11	2
127	IL_15409.1 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Minor groove platform (1)	5	2
128	IL_45034.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	2
129	IL_37985.1 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated non-canonical cWW pair (1)	6	2
130	IL_76546.1 View exemplar Basepair signature: cWW-cHH-cWW History status: Exact match Other IL (1) Major groove platform (1)	5	2
131	IL_26292.1 View exemplar Basepair signature: cWW-cWW-L-cWW History status: Exact match Isolated non-canonical cWW pair (1)	7	2
132	IL_51590.1 View exemplar Basepair signature: cWW-cSH-tWH-cSH-cWW-cWW History status: Exact match C-loop with extra cWW pair (1) Other IL (1)	9	2
133	IL_61596.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-cWW History status: Exact match	10	2
134	IL_92440.1 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (2)	14	2
135	IL_05690.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-bif-cWW History status: Exact match	12	2
136	IL_23663.1 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (1)	7	2
137	IL_69418.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (2)	8	2
138	IL_80884.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L History status: Exact match	10	2
139	IL_18369.2 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: Exact match	8	2
140	IL_26351.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)	14	2
141	IL_00465.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match Isolated non-canonical cWW pair (1)	6	2
142	IL_47265.1 View exemplar Basepair signature: cWW-tSS-cSS-tWW-L-tSH-R-R-cWW History status: Exact match	11	2
143	IL_67155.1 View exemplar Basepair signature: cWW-cWS-L-L-cWW History status: Exact match	8	2
144	IL_95511.1 View exemplar Basepair signature: cWW-R-R-R-tSW-L-L-cWW History status: Exact match	11	2
145	IL_06171.1 View exemplar Basepair signature: cWW-tHW-L-tHS-cWW History status: Exact match	9	2
146	IL_42032.1 View exemplar Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L History status: Exact match	11	2
147	IL_83095.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
148	IL_77870.1 View exemplar Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW History status: Exact match	13	2
149	IL_95688.1 View exemplar Basepair signature: cWW-L-cSS-cSS-L-R-cWW History status: Exact match	11	2
150	IL_18894.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Quadruple sheared (2)	12	2
151	IL_75082.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged A (1)	4	2
152	IL_01375.1 View exemplar Basepair signature: cWW-R-R-tWH-L-R-cWW History status: Exact match UAA/GAN related (1)	10	2
153	IL_16109.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (2)	10	2
154	IL_34470.1 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)	17	2
155	IL_42898.1 View exemplar Basepair signature: cWW-tWH-tWH-tWH-cSH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	12	2
156	IL_70816.1 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	2
157	IL_90612.1 View exemplar Basepair signature: cWW-tWH-tWH-tWH-L-R-R-L-tWW-cWW History status: Exact match	14	2
158	IL_99373.1 View exemplar Basepair signature: cWW-bif-L-cWW History status: Exact match	7	2
159	IL_64611.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	2
160	IL_83675.1 View exemplar Basepair signature: cWW-R-tSS-tWW-tWW-cWW History status: Exact match Kink-turn related (1)	11	2
161	IL_67703.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW History status: Exact match	22	2
162	IL_78834.1 View exemplar Basepair signature: cWW-tSH-L-R-L-L-cWW History status: Exact match	10	2
163	IL_88004.1 View exemplar Basepair signature: cWW-cWW-cSW-cWW History status: Exact match Self complementary (1) Multiple bulged bases with non-canonical cWW (1)	8	2
164	IL_64738.1 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	2
165	IL_39448.1 View exemplar Basepair signature: cWW-cWW-L-R-tHS-cWW History status: Exact match Triple sheared related (1)	10	2
166	IL_78994.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: Exact match	8	2
167	IL_88269.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tWW-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (2)	11	2
168	IL_19244.1 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	2
169	IL_07281.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (1)	4	2
170	IL_24905.2 View exemplar Basepair signature: cWW-cSW-R-cWW History status: Exact match	7	2
171	IL_50992.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-cSH-tHH-tHS-cWW-cWW History status: Exact match 9x8 Sarcin-Ricin; G-bulge (2)	17	2
172	IL_81522.1 View exemplar Basepair signature: cWW-cWS-L-cWW History status: Exact match Major groove minor groove platform with intercalation; mini C-loop (2)	6	2
173	IL_32705.1 View exemplar Basepair signature: cWW-R-tWH-cSW-L-R-R-L-tHS-cWW History status: Exact match Kink-turn related (1)	14	2
174	IL_25167.1 View exemplar Basepair signature: cWW-L-tWH-R-R-R-cWW History status: Exact match Major groove platform; stack outside cWW (1)	9	2
175	IL_35058.1 View exemplar Basepair signature: cWW-tSW-L-cWS-tSW-R-R-cWW History status: Exact match Symmetric double minor groove platform (1)	9	1
176	IL_51366.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW History status: Exact match	20	1
177	IL_82302.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged A (1)	4	1
178	IL_12750.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	15	1
179	IL_20245.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	18	1
180	IL_29821.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: Exact match UAA/GAN with extra stack (1)	10	1
181	IL_46937.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated non-canonical cWW contact (1)	6	1
182	IL_55896.1 View exemplar Basepair signature: cWW-tSH-tHS-tWS-cWW History status: Exact match Triple sheared (1)	10	1
183	IL_76103.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Stack outside cWW (1)	5	1
184	IL_04736.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
185	IL_33557.1 View exemplar Basepair signature: cWW-tHH-R-L-R-L-L-R-L-R-cWW History status: Exact match Kink-turn related (1)	14	1
186	IL_41177.1 View exemplar Basepair signature: cWW-cWW-cSH-cSH-tHS-cWW History status: Exact match 8-nt loop receptor (1)	8	1
187	IL_58390.1 View exemplar Basepair signature: cWW-bif-tSW-L-L-L-cWW-cSW-R-cWW History status: Exact match Minor groove platform related (1)	14	1
188	IL_68913.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-cSH-L-L-cWW History status: Exact match	14	1
189	IL_80617.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated non-canonical cWW contact (1)	6	1
190	IL_17765.1 View exemplar Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L History status: Exact match	14	1
191	IL_25738.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	1
192	IL_51528.1 View exemplar Basepair signature: cWW-L-L-tSS-L-R-R-R-cWW History status: Exact match Kink-turn (1)	11	1
193	IL_61275.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match	8	1
194	IL_74184.1 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L-L-L History status: Exact match	11	1
195	IL_92343.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cWW History status: Exact match	10	1
196	IL_20460.1 View exemplar Basepair signature: cWW-tHH-L-R-L-cWW History status: Exact match	9	1
197	IL_47108.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-cWW History status: Exact match	9	1
198	IL_94878.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	26	1
199	IL_15795.1 View exemplar Basepair signature: cWW-cSH-R-cWW History status: Exact match Minor groove platform (1)	6	1
200	IL_23563.1 View exemplar Basepair signature: cWW-tHW-tHS-cWW-cWW History status: Exact match	10	1
201	IL_41414.1 View exemplar Basepair signature: cWW-L-R-L-cWW-tWH-cWW-L-L-L-R-L-R-cSH-L-L History status: Exact match	21	1
202	IL_69091.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match	16	1
203	IL_90157.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWS-cWW History status: Exact match	12	1
204	IL_17971.1 View exemplar Basepair signature: cWW-tWW-L-tWW-L-cWW History status: Exact match	10	1
205	IL_45257.1 View exemplar Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-tHH-cWW History status: Exact match	14	1
206	IL_74271.1 View exemplar Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW History status: Exact match	12	1
207	IL_82988.1 View exemplar Basepair signature: cWW-cWW-L-L-tHS-cWW History status: Exact match	10	1
208	IL_13013.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-cSH-R-R-L-tHH-tHS-cWW History status: Exact match	21	1
209	IL_20463.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
210	IL_30113.1 View exemplar Basepair signature: cWW-tSS-L-cSS-R-L-L-L-L-cWW History status: Exact match	11	1
211	IL_56034.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cWW History status: Exact match	10	1
212	IL_76919.1 View exemplar Basepair signature: cWW-R-R-R-tHS-cWW History status: Exact match	9	1
213	IL_85931.1 View exemplar Basepair signature: cWW-cSW-tSH-tHH-tSS-tSS-R-R-cWW History status: Exact match	13	1
214	IL_34013.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
215	IL_41593.1 View exemplar Basepair signature: cWW-cHW-tHW-tHW-tHW-bif-cWW History status: Exact match	14	1
216	IL_49850.1 View exemplar Basepair signature: cWW-L-R-L-L-L-cWW-cSW-R-cWW History status: Exact match Minor groove platform related (1)	13	1
217	IL_59490.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: Exact match	8	1
218	IL_90348.1 View exemplar Basepair signature: cWW-cSW-L-cWW-L History status: Exact match		1
219	IL_98000.1 View exemplar Basepair signature: cWW-R-tHS-cWW History status: Exact match	7	1
220	IL_35410.1 View exemplar Basepair signature: cWW-cSH-tWH-cSH-cWS-cWW History status: Exact match C-loop (1)	7	1
221	IL_51877.1 View exemplar Basepair signature: cWW-L-L-tWW-L-L-L-cWS-cWW History status: Exact match	13	1
222	IL_61852.1 View exemplar Basepair signature: cWW-cWW-tSH-tWH-tHS-tSS-tSS-R-cWW History status: Exact match Kink-turn (1)	14	1
223	IL_74719.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (1)	8	1
224	IL_92889.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	26	1
225	IL_13368.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW-cWW History status: Exact match	10	1
226	IL_30294.1 View exemplar Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW History status: Exact match Kink-turn (1)	15	1
227	IL_56105.1 View exemplar Basepair signature: cWW-tSH-tSH-cWW-L History status: Exact match	8	1
228	IL_77253.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	1
229	IL_23735.1 View exemplar Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW History status: Exact match	26	1
230	IL_59724.1 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
231	IL_69457.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	13	1
232	IL_80920.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (1)	8	1
233	IL_98711.1 View exemplar Basepair signature: cWW-tSH-tHW-tWW-cWW History status: Exact match tSH-tHW-tWW (1)	10	1
234	IL_45978.1 View exemplar Basepair signature: cWW-R-R-cWW-cWW-cWW History status: Exact match	10	1
235	IL_62353.1 View exemplar Basepair signature: cWW-cSS-cSS-R-cWW History status: Exact match 180 degree turn (1)	5	1
236	IL_74736.1 View exemplar Basepair signature: cWW-tSH-L-R-R-L-cWW History status: Exact match	9	1
237	IL_93094.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW History status: Exact match Reverse kink-turn (1)	11	1
238	IL_01335.1 View exemplar Basepair signature: cWW-cHW-L-L-L-L-L-L-L-L-cWW History status: Exact match	14	1
239	IL_13394.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	21	1
240	IL_21121.1 View exemplar Basepair signature: cWW-tSW-cWS-cSH-tSW-tWH-R-R-cWW-cWW History status: Exact match		1
241	IL_31019.1 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match Bulged stacked bases (1)	6	1
242	IL_47743.1 View exemplar Basepair signature: cWW-cSW-tWH-cSH-L-cWS-cWW History status: Exact match	9	1
243	IL_56283.1 View exemplar Basepair signature: cWW-L-L-L-L-L-cWW History status: Exact match	9	1
244	IL_06267.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-L-L-cWW-cWW History status: Exact match	14	1
245	IL_15978.1 View exemplar Basepair signature: cWW-tSH-L-cWS-cWW-L History status: Exact match	11	1
246	IL_34223.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (1)	8	1
247	IL_42092.1 View exemplar Basepair signature: cWW-tSH-L-L-L-cWW History status: Exact match Isolated basepair with bulged bases (1)	9	1
248	IL_50309.1 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	1
249	IL_60049.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
250	IL_70801.1 View exemplar Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW History status: Exact match	13	1
251	IL_98876.1 View exemplar Basepair signature: cWW-cWW-L-R-R-tHW-bif-cWW History status: Exact match	13	1
252	IL_27833.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
253	IL_45988.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: Exact match	9	1
254	IL_63059.1 View exemplar Basepair signature: cWW-cSW-L-R-tHH-L-R-R-cSH-cWW History status: Exact match	14	1
255	IL_93585.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-tWH-L-cSH-L History status: Exact match Kink-turn related (1)	11	1
256	IL_31504.1 View exemplar Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	18	1
257	IL_39287.1 View exemplar Basepair signature: cWW-L-R-L-tSH-tSS-L-tHS-cWW-L-L History status: Exact match Kink-turn related (1)	15	1
258	IL_95811.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-R-L History status: Exact match Vitamin B12 Aptamer (1)	11	1
259	IL_06300.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	1
260	IL_23934.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: Exact match tSH-tHW (1)	9	1
261	IL_60240.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	1
262	IL_09986.1 View exemplar Basepair signature: cWW-L-R-L-tHW-L-L-cWW History status: Exact match	11	1
263	IL_19022.1 View exemplar Basepair signature: cWW-tSH-R-tHH-tHS-cWW History status: Exact match	11	1
264	IL_46112.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	1
265	IL_54670.1 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Exact match tSH-tSH-tHH-tHS (1)	12	1
266	IL_01502.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW History status: Exact match	13	1
267	IL_22436.1 View exemplar Basepair signature: cWW-L-tWH-tHW-cWW-cWW History status: Exact match Kink-turn related (1)		1
268	IL_31890.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L History status: Exact match		1
269	IL_39409.1 View exemplar Basepair signature: cWW-R-R-tWH-tSH-tHS-cWW History status: Exact match	12	1
270	IL_95942.1 View exemplar Basepair signature: cWW-L-R-L-L-L-L-L-cWW History status: Exact match	11	1
271	IL_16160.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated non-canonical cWW pair (1)	6	1
272	IL_24106.1 View exemplar Basepair signature: cWW-tSH-tWH-tWH-R-R-R-R-R-R-R-cWW History status: Exact match	17	1
273	IL_34590.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
274	IL_43454.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	1
275	IL_60287.1 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: Exact match	8	1
276	IL_90922.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-tSS-tSS-R-cWW History status: Exact match Kink-turn (1)	12	1
277	IL_99902.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-cWW History status: Exact match	10	1
278	IL_19048.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW History status: Exact match	14	1
279	IL_28512.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	13	1
280	IL_36582.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted A; G-bulge (1)	14	1
281	IL_46401.1 View exemplar Basepair signature: cWW-L-L-L-L-tHH-cWW History status: Exact match	10	1
282	IL_75392.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-L-L-tSS-R-R-R-cWW History status: Exact match	16	1
283	IL_84009.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match Single stack bend (1)	6	1
284	IL_94351.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-cWW History status: Exact match	11	1
285	IL_22745.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	1
286	IL_56501.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
287	IL_67834.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-tWW-R-R-R-R-R-R-R-R-R-R-R-R-cWW History status: Exact match	24	1
288	IL_96335.1 View exemplar Basepair signature: cWW-cSH-L-tSH-cWW-R-R-cWW History status: Exact match	11	1
289	IL_06552.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (1)	4	1
290	IL_16702.1 View exemplar Basepair signature: cWW-tSH-tWH-tHW-cWH-tSS-tHW-tHH-cWW History status: Exact match	15	1
291	IL_50789.1 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	1
292	IL_71274.1 View exemplar Basepair signature: cWW-tHS-tHS-cWW History status: Exact match	8	1
293	IL_28999.1 View exemplar Basepair signature: cWW-R-R-R-tSW-L-cWW History status: Exact match	10	1
294	IL_46461.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L-L-L-R-L-R-tSW-R-R-L-R-L-R-L-R History status: Exact match	28	1
295	IL_54896.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	1
296	IL_64842.1 View exemplar Basepair signature: cWW-L-tWH-L-cWW-L-cSH History status: Exact match	10	1
297	IL_84315.1 View exemplar Basepair signature: cWW-tHS-cWS-R-tSW-R-R-cWW History status: Exact match	10	1
298	IL_03420.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW History status: Exact match tSH-tHS-tHW (1)	13	1
299	IL_14397.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	1
300	IL_22821.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match Pseudoknot (1)	17	1
301	IL_32181.1 View exemplar Basepair signature: cWW-cWW-cWW-L-cSW-L-R-R-R-cWW History status: Exact match	15	1
302	IL_39507.1 View exemplar Basepair signature: cWW-L-R-L-L-L-cWW History status: Exact match	9	1
303	IL_56867.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW History status: Exact match	13	1
304	IL_96942.1 View exemplar Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW History status: Exact match	14	1
305	IL_16834.1 View exemplar Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW History status: Exact match	13	1
306	IL_34780.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW History status: Exact match Kink-turn (1)	16	1
307	IL_72316.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cSS-tSS-cWW History status: Exact match	14	1
308	IL_11882.1 View exemplar Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW History status: Exact match		1
309	IL_19296.1 View exemplar Basepair signature: cWW-cSS-L-tHW-tSS-L-L-L-L-L-L-cWW History status: Exact match	14	1
310	IL_29509.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (1)	15	1
311	IL_46540.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged G (1)	4	1
312	IL_55270.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
313	IL_64944.1 View exemplar Basepair signature: cWW-cWW-cSH-tHW-L-cWW History status: Exact match	11	1
314	IL_75840.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
315	IL_84409.1 View exemplar Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L History status: Exact match	23	1
316	IL_94466.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: Exact match	8	1
317	IL_14632.1 View exemplar Basepair signature: cWW-L-cWH-R-R-cWW History status: Exact match	8	1
318	IL_49109.1 View exemplar Basepair signature: cWW-tSH-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match tSH-tHW-tHH-tHS (1)	16	1
319	IL_79734.1 View exemplar Basepair signature: cWW-R-R-R-R-cWW History status: Exact match	8	1
320	IL_89055.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-cWW-L-L History status: Exact match	16	1
321	IL_97253.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L History status: Exact match		1
322	IL_44325.1 View exemplar Basepair signature: cWW-cWH-cWW-L History status: Exact match	6	1
323	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW History status: Exact match	10	1
324	IL_73523.1 View exemplar Basepair signature: cWW-cWW-L-cSW-L-tHS-cWW History status: Exact match	12	1
325	IL_82194.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	1
326	IL_12735.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: Exact match	8	1
327	IL_46732.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	1
328	IL_65055.1 View exemplar Basepair signature: cWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	23	1
329	IL_85630.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	15	1
330	IL_94501.1 View exemplar Basepair signature: cWW-cWW-cWW-tHW-cWH-cSH-cWH-cSH-tHS-cWW History status: Exact match	15	1
331	IL_04356.1 View exemplar Basepair signature: cWW-tWH-tWH-L-R-L-tWW-cWW History status: Exact match	13	1
332	IL_14754.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-cWW History status: Exact match	16	1
333	IL_49410.1 View exemplar Basepair signature: cWW-tSH-L-tHS-cWW History status: Exact match UAA/GAN variation (1)	9	1
334	IL_80355.1 View exemplar Basepair signature: cWW-tWW-tWW-L-R-R-L-L-L-L-L-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	23	1
335	IL_89731.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R-cWW History status: Exact match	10	1
336	IL_97256.1 View exemplar Basepair signature: cWW-tSH-L-R-R-L-L-L-cWW History status: Exact match	12	1

Coloring options:
Nucleotide numbers

Exact match 336;

Internal Loop Motif Atlas Release 3.9 Download CSV JSON annotations

Internal Loop Motif Atlas Release 3.9

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