6S0X | Motifs

98 Hairpin loops
154 Internal loops
23 Junction loops

Valid loops

#	loop id	location	annotation	motif
1	HL_6S0X_001 ➜	1/A/59:68	NA	NA
2	HL_6S0X_002 ➜	1/A/81:104	NA	NA
3	HL_6S0X_003 ➜	1/A/122:127	NA	NA
4	HL_6S0X_004 ➜	1/A/136:143	NA	NA
5	HL_6S0X_005 ➜	1/A/157:171	NA	NA
6	HL_6S0X_006 ➜	1/A/197:204	NA	NA
7	HL_6S0X_007 ➜	1/A/227:234	NA	NA
8	HL_6S0X_008 ➜	1/A/249:255	NA	NA
9	HL_6S0X_009 ➜	1/A/283:288	NA	NA
10	HL_6S0X_010 ➜	1/A/348:355	NA	NA
11	HL_6S0X_011 ➜	1/A/370:378	NA	NA
12	HL_6S0X_012 ➜	1/A/421:445	NA	NA
13	HL_6S0X_013 ➜	1/A/456:463	NA	NA
14	HL_6S0X_014 ➜	1/A/508:513	NA	NA
15	HL_6S0X_015 ➜	1/A/533:538	NA	NA
16	HL_6S0X_016 ➜	1/A/587:594	NA	NA
17	HL_6S0X_017 ➜	1/A/609:618	NA	NA
18	HL_6S0X_018 ➜	1/A/655:661	NA	NA
19	HL_6S0X_019 ➜	1/A/674:679	NA	NA
20	HL_6S0X_020 ➜	1/A/686:692	NA	NA
21	HL_6S0X_021 ➜	1/A/755:766	NA	NA
22	HL_6S0X_022 ➜	1/A/789:798	NA	NA
23	HL_6S0X_023 ➜	1/A/823:831	NA	NA
24	HL_6S0X_024 ➜	1/A/871:876	NA	NA
25	HL_6S0X_025 ➜	1/A/925:942	NA	NA
26	HL_6S0X_026 ➜	1/A/998:1007	NA	NA
27	HL_6S0X_027 ➜	1/A/1022:1029	NA	NA
28	HL_6S0X_028 ➜	1/A/1108:1118	NA	NA
29	HL_6S0X_029 ➜	1/A/1213:1218	NA	NA
30	HL_6S0X_030 ➜	1/A/1260:1265	NA	NA
31	HL_6S0X_031 ➜	1/A/1318:1326	NA	NA
32	HL_6S0X_032 ➜	1/A/1360:1368	NA	NA
33	HL_6S0X_033 ➜	1/A/1400:1405	NA	NA
34	HL_6S0X_034 ➜	1/A/1426:1435	NA	NA
35	HL_6S0X_035 ➜	1/A/1535:1541	NA	NA
36	HL_6S0X_036 ➜	1/A/1612:1615	NA	NA
37	HL_6S0X_037 ➜	1/A/1656:1663	NA	NA
38	HL_6S0X_038 ➜	1/A/1673:1681	NA	NA
39	HL_6S0X_039 ➜	1/A/1735:1740	NA	NA
40	HL_6S0X_040 ➜	1/A/1760:1769	NA	NA
41	HL_6S0X_041 ➜	1/A/1779:1783	NA	NA
42	HL_6S0X_042 ➜	1/A/1803:1815	NA	NA
43	HL_6S0X_043 ➜	1/A/1833:1838	NA	NA
44	HL_6S0X_044 ➜	1/A/1891:1905	NA	NA
45	HL_6S0X_045 ➜	1/A/1937:1947	NA	NA
46	HL_6S0X_046 ➜	1/A/1976:1984	NA	NA
47	HL_6S0X_047 ➜	1/A/2054:2063	NA	NA
48	HL_6S0X_048 ➜	1/A/2168:2177	NA	NA
49	HL_6S0X_049 ➜	1/A/2236:2242	NA	NA
50	HL_6S0X_050 ➜	1/A/2291:2303	NA	NA
51	HL_6S0X_052 ➜	1/A/2351:2358	NA	NA
52	HL_6S0X_053 ➜	1/A/2382:2389	NA	NA
53	HL_6S0X_054 ➜	1/A/2401:2406	NA	NA
54	HL_6S0X_055 ➜	1/A/2431:2440	NA	NA
55	HL_6S0X_056 ➜	1/A/2498:2506	NA	NA
56	HL_6S0X_057 ➜	1/A/2555:2562	NA	NA
57	HL_6S0X_058 ➜	1/A/2577:2585	NA	NA
58	HL_6S0X_059 ➜	1/A/2621:2626	NA	NA
59	HL_6S0X_060 ➜	1/A/2685:2690	NA	NA
60	HL_6S0X_061 ➜	1/A/2728:2733	NA	NA
61	HL_6S0X_062 ➜	1/A/2772:2786	NA	NA
62	HL_6S0X_063 ➜	1/A/2839:2847	NA	NA
63	HL_6S0X_064 ➜	1/A/2876:2881	NA	NA
64	HL_6S0X_065 ➜	1/B/36:42	NA	NA
65	HL_6S0X_066 ➜	1/B/83:88	NA	NA
66	HL_6S0X_067 ➜	1/a/13:23	NA	NA
67	HL_6S0X_068 ➜	1/a/72:97	NA	NA
68	HL_6S0X_069 ➜	1/a/158:163	NA	NA
69	HL_6S0X_070 ➜	1/a/187:203	NA	NA
70	HL_6S0X_071 ➜	1/a/213:226	NA	NA
71	HL_6S0X_072 ➜	1/a/267:275	NA	NA
72	HL_6S0X_073 ➜	1/a/304:309	NA	NA
73	HL_6S0X_074 ➜	1/a/328:341	NA	NA
74	HL_6S0X_075 ➜	1/a/350:355	NA	NA
75	HL_6S0X_076 ➜	1/a/386:393	NA	NA
76	HL_6S0X_077 ➜	1/a/427:432	NA	NA
77	HL_6S0X_078 ➜	1/a/469:480	NA	NA
78	HL_6S0X_079 ➜	1/a/530:535	NA	NA
79	HL_6S0X_080 ➜	1/a/625:631	NA	NA
80	HL_6S0X_081 ➜	1/a/697:706	NA	NA
81	HL_6S0X_082 ➜	1/a/734:739	NA	NA
82	HL_6S0X_083 ➜	1/a/794:804	NA	NA
83	HL_6S0X_084 ➜	1/a/848:855	NA	NA
84	HL_6S0X_085 ➜	1/a/871:876	NA	NA
85	HL_6S0X_086 ➜	1/a/906:911	NA	NA
86	HL_6S0X_087 ➜	1/a/972:981	NA	NA
87	HL_6S0X_088 ➜	1/a/1021:1026	NA	NA
88	HL_6S0X_089 ➜	1/a/1038:1043	NA	NA
89	HL_6S0X_090 ➜	1/a/1087:1092	NA	NA
90	HL_6S0X_091 ➜	1/a/1100:1107	NA	NA
91	HL_6S0X_092 ➜	1/a/1144:1151	NA	NA
92	HL_6S0X_093 ➜	1/a/1174:1182	NA	NA
93	HL_6S0X_094 ➜	1/a/1275:1280	NA	NA
94	HL_6S0X_095 ➜	1/a/1324:1333	NA	NA
95	HL_6S0X_096 ➜	1/a/1366:1376	NA	NA
96	HL_6S0X_097 ➜	1/a/1455:1468	NA	NA
97	HL_6S0X_098 ➜	1/a/1526:1531	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	HL_6S0X_051 ➜	incomplete nts	NA

Valid loops

#	loop id	location	annotation	motif
1	IL_6S0X_001 ➜	1/A/24:30,1/A/555:561	NA	NA
2	IL_6S0X_002 ➜	1/A/36:37,1/A/488:490	NA	NA
3	IL_6S0X_003 ➜	1/A/152:153,1/A/175:177	NA	NA
4	IL_6S0X_004 ➜	1/A/186:187,1/A/215:217	NA	NA
5	IL_6S0X_005 ➜	1/A/190:197,1/A/204:212	NA	NA
6	IL_6S0X_006 ➜	1/A/241:248,1/A/256:262	NA	NA
7	IL_6S0X_007 ➜	1/A/302:303,1/A/413:415	NA	NA
8	IL_6S0X_008 ➜	1/A/303:307,1/A/408:413	NA	NA
9	IL_6S0X_009 ➜	1/A/580:584,1/A/597:601	NA	NA
10	IL_6S0X_010 ➜	1/A/631:634,1/A/711:713	NA	NA
11	IL_6S0X_011 ➜	1/A/637:640,1/A/705:708	NA	NA
12	IL_6S0X_012 ➜	1/A/642:644,1/A/701:703	NA	NA
13	IL_6S0X_013 ➜	1/A/647:653,1/A/663:669	NA	NA
14	IL_6S0X_014 ➜	1/A/717:719,1/A/851:853	NA	NA
15	IL_6S0X_015 ➜	1/A/719:723,1/A/844:851	NA	NA
16	IL_6S0X_016 ➜	1/A/742:743,1/A/808:810	NA	NA
17	IL_6S0X_017 ➜	1/A/747:748,1/A/773:775	NA	NA
18	IL_6S0X_018 ➜	1/A/748:752,1/A/769:773	NA	NA
19	IL_6S0X_019 ➜	1/A/783:785,1/A/802:803	NA	NA
20	IL_6S0X_020 ➜	1/A/820:822,1/A/832:836	NA	NA
21	IL_6S0X_021 ➜	1/A/881:883,1/A/984:987	NA	NA
22	IL_6S0X_022 ➜	1/A/889:894,1/A/974:978	NA	NA
23	IL_6S0X_023 ➜	1/A/907:914,1/A/953:960	NA	NA
24	IL_6S0X_024 ➜	1/A/920:924,1/A/943:947	NA	NA
25	IL_6S0X_025 ➜	1/A/1038:1041,1/A/1202:1204	NA	NA
26	IL_6S0X_026 ➜	1/A/1042:1046,1/A/1197:1201	NA	NA
27	IL_6S0X_027 ➜	1/A/1048:1057,1/A/1193:1195	NA	NA
28	IL_6S0X_028 ➜	1/A/1061:1068,1/A/1184:1189	NA	NA
29	IL_6S0X_029 ➜	1/A/1068:1075,1/A/1167:1184	NA	NA
30	IL_6S0X_030 ➜	1/A/1075:1078,1/A/1165:1167	NA	NA
31	IL_6S0X_031 ➜	1/A/1079:1083,1/A/1160:1164	NA	NA
32	IL_6S0X_032 ➜	1/A/1212:1213,1/A/1218:1220	NA	NA
33	IL_6S0X_033 ➜	1/A/1243:1245,1/A/1277:1279	NA	NA
34	IL_6S0X_034 ➜	1/A/1246:1254,1/A/1271:1276	NA	NA
35	IL_6S0X_035 ➜	1/A/1257:1260,1/A/1265:1268	NA	NA
36	IL_6S0X_036 ➜	1/A/1300:1307,1/A/2038:2044	NA	NA
37	IL_6S0X_037 ➜	1/A/1356:1360,1/A/1368:1370	NA	NA
38	IL_6S0X_038 ➜	1/A/1388:1392,1/A/1413:1417	NA	NA
39	IL_6S0X_039 ➜	1/A/1394:1398,1/A/1407:1411	NA	NA
40	IL_6S0X_040 ➜	1/A/1447:1451,1/A/1634:1636	NA	NA
41	IL_6S0X_041 ➜	1/A/1451:1465,1/A/1624:1634	NA	NA
42	IL_6S0X_042 ➜	1/A/1476:1479,1/A/1604:1608	NA	NA
43	IL_6S0X_043 ➜	1/A/1511:1516,1/A/1564:1570	NA	NA
44	IL_6S0X_044 ➜	1/A/1518:1523,1/A/1557:1562	NA	NA
45	IL_6S0X_045 ➜	1/A/1524:1526,1/A/1549:1556	NA	NA
46	IL_6S0X_046 ➜	1/A/1532:1534,1/A/1542:1543	NA	NA
47	IL_6S0X_047 ➜	1/A/1695:1701,1/A/2029:2033	NA	NA
48	IL_6S0X_048 ➜	1/A/1701:1706,1/A/2024:2029	NA	NA
49	IL_6S0X_049 ➜	1/A/1706:1709,1/A/2022:2024	NA	NA
50	IL_6S0X_050 ➜	1/A/1710:1713,1/A/2020:2021	NA	NA
51	IL_6S0X_051 ➜	1/A/1713:1718,1/A/2017:2020	NA	NA
52	IL_6S0X_052 ➜	1/A/1730:1735,1/A/1740:1746	NA	NA
53	IL_6S0X_053 ➜	1/A/1755:1759,1/A/1770:1774	NA	NA
54	IL_6S0X_054 ➜	1/A/1797:1798,1/A/2007:2009	NA	NA
55	IL_6S0X_055 ➜	1/A/1825:1831,1/A/1840:1848	NA	NA
56	IL_6S0X_056 ➜	1/A/1864:1867,1/A/1929:1930	NA	NA
57	IL_6S0X_057 ➜	1/A/1868:1869,1/A/1925:1928	NA	NA
58	IL_6S0X_058 ➜	1/A/1873:1876,1/A/1919:1921	NA	NA
59	IL_6S0X_059 ➜	1/A/1876:1882,1/A/1914:1919	NA	NA
60	IL_6S0X_060 ➜	1/A/1883:1887,1/A/1909:1913	NA	NA
61	IL_6S0X_061 ➜	1/A/1961:1972,1/A/1988:1991	NA	NA
62	IL_6S0X_062 ➜	1/A/2077:2079,1/A/2644:2645	NA	NA
63	IL_6S0X_063 ➜	1/A/2080:2083,1/A/2638:2643	NA	NA
64	IL_6S0X_064 ➜	1/A/2094:2096,1/A/2469:2470	NA	NA
65	IL_6S0X_065 ➜	1/A/2097:2098,1/A/2465:2468	NA	NA
66	IL_6S0X_066 ➜	1/A/2108:2110,1/A/2263:2266	NA	NA
67	IL_6S0X_067 ➜	1/A/2123:2125,1/A/2218:2220	NA	NA
68	IL_6S0X_069 ➜	1/A/2151:2154,1/A/2188:2201	NA	NA
69	IL_6S0X_070 ➜	1/A/2156:2168,1/A/2177:2186	NA	NA
70	IL_6S0X_071 ➜	1/A/2229:2231,1/A/2247:2248	NA	NA
71	IL_6S0X_072 ➜	1/A/2324:2326,1/A/2344:2348	NA	NA
72	IL_6S0X_073 ➜	1/A/2375:2380,1/A/2391:2396	NA	NA
73	IL_6S0X_074 ➜	1/A/2427:2430,1/A/2441:2443	NA	NA
74	IL_6S0X_075 ➜	1/A/2484:2486,1/A/2520:2521	NA	NA
75	IL_6S0X_076 ➜	1/A/2486:2489,1/A/2515:2520	NA	NA
76	IL_6S0X_077 ➜	1/A/2493:2497,1/A/2507:2511	NA	NA
77	IL_6S0X_078 ➜	1/A/2534:2535,1/A/2607:2609	NA	NA
78	IL_6S0X_079 ➜	1/A/2537:2539,1/A/2601:2605	NA	NA
79	IL_6S0X_080 ➜	1/A/2539:2540,1/A/2598:2601	NA	NA
80	IL_6S0X_081 ➜	1/A/2549:2550,1/A/2567:2570	NA	NA
81	IL_6S0X_082 ➜	1/A/2618:2619,1/A/2628:2630	NA	NA
82	IL_6S0X_083 ➜	1/A/2663:2667,1/A/2801:2809	NA	NA
83	IL_6S0X_084 ➜	1/A/2679:2685,1/A/2690:2695	NA	NA
84	IL_6S0X_085 ➜	1/A/2707:2711,1/A/2752:2754	NA	NA
85	IL_6S0X_086 ➜	1/A/2714:2718,1/A/2745:2749	NA	NA
86	IL_6S0X_087 ➜	1/A/2722:2723,1/A/2738:2741	NA	NA
87	IL_6S0X_088 ➜	1/A/2764:2769,1/A/2789:2794	NA	NA
88	IL_6S0X_089 ➜	1/A/2816:2831,1/A/2909:2913	NA	NA
89	IL_6S0X_090 ➜	1/A/2858:2860,1/A/2897:2900	NA	NA
90	IL_6S0X_091 ➜	1/A/2862:2866,1/A/2890:2895	NA	NA
91	IL_6S0X_092 ➜	1/A/2866:2872,1/A/2885:2890	NA	NA
92	IL_6S0X_093 ➜	1/B/15:16,1/B/63:65	NA	NA
93	IL_6S0X_094 ➜	1/B/21:29,1/B/49:58	NA	NA
94	IL_6S0X_095 ➜	1/B/32:36,1/B/42:46	NA	NA
95	IL_6S0X_096 ➜	1/B/69:77,1/B/94:102	NA	NA
96	IL_6S0X_097 ➜	1/B/78:80,1/B/91:93	NA	NA
97	IL_6S0X_098 ➜	1/a/31:33,1/a/560:561	NA	NA
98	IL_6S0X_099 ➜	1/a/45:46,1/a/404:406	NA	NA
99	IL_6S0X_100 ➜	1/a/48:53,1/a/367:369	NA	NA
100	IL_6S0X_101 ➜	1/a/54:57,1/a/364:366	NA	NA
101	IL_6S0X_102 ➜	1/a/64:67,1/a/102:103	NA	NA
102	IL_6S0X_103 ➜	1/a/68:71,1/a/98:101	NA	NA
103	IL_6S0X_104 ➜	1/a/128:131,1/a/239:240	NA	NA
104	IL_6S0X_105 ➜	1/a/132:136,1/a/235:238	NA	NA
105	IL_6S0X_106 ➜	1/a/147:153,1/a/168:175	NA	NA
106	IL_6S0X_107 ➜	1/a/250:255,1/a/285:292	NA	NA
107	IL_6S0X_108 ➜	1/a/257:260,1/a/282:283	NA	NA
108	IL_6S0X_109 ➜	1/a/300:301,1/a/312:316	NA	NA
109	IL_6S0X_110 ➜	1/a/375:377,1/a/400:401	NA	NA
110	IL_6S0X_111 ➜	1/a/379:383,1/a/397:398	NA	NA
111	IL_6S0X_112 ➜	1/a/383:384,1/a/395:397	NA	NA
112	IL_6S0X_113 ➜	1/a/454:458,1/a/491:496	NA	NA
113	IL_6S0X_114 ➜	1/a/512:519,1/a/548:549	NA	NA
114	IL_6S0X_115 ➜	1/a/523:529,1/a/536:544	NA	NA
115	IL_6S0X_116 ➜	1/a/577:583,1/a/889:890	NA	NA
116	IL_6S0X_117 ➜	1/a/588:592,1/a/765:769	NA	NA
117	IL_6S0X_118 ➜	1/a/602:604,1/a/652:653	NA	NA
118	IL_6S0X_119 ➜	1/a/605:607,1/a/647:651	NA	NA
119	IL_6S0X_120 ➜	1/a/612:620,1/a/636:642	NA	NA
120	IL_6S0X_121 ➜	1/a/662:663,1/a/759:762	NA	NA
121	IL_6S0X_122 ➜	1/a/665:666,1/a/755:757	NA	NA
122	IL_6S0X_123 ➜	1/a/670:675,1/a/747:751	NA	NA
123	IL_6S0X_124 ➜	1/a/681:686,1/a/720:725	NA	NA
124	IL_6S0X_125 ➜	1/a/690:696,1/a/707:716	NA	NA
125	IL_6S0X_126 ➜	1/a/781:787,1/a/811:814	NA	NA
126	IL_6S0X_127 ➜	1/a/787:791,1/a/807:811	NA	NA
127	IL_6S0X_128 ➜	1/a/896:903,1/a/914:919	NA	NA
128	IL_6S0X_129 ➜	1/a/931:933,1/a/1402:1405	NA	NA
129	IL_6S0X_130 ➜	1/a/934:936,1/a/1400:1401	NA	NA
130	IL_6S0X_131 ➜	1/a/962:963,1/a/1236:1238	NA	NA
131	IL_6S0X_132 ➜	1/a/1002:1007,1/a/1054:1056	NA	NA
132	IL_6S0X_133 ➜	1/a/1007:1008,1/a/1052:1054	NA	NA
133	IL_6S0X_134 ➜	1/a/1010:1012,1/a/1048:1050	NA	NA
134	IL_6S0X_135 ➜	1/a/1059:1061,1/a/1218:1219	NA	NA
135	IL_6S0X_136 ➜	1/a/1062:1067,1/a/1214:1217	NA	NA
136	IL_6S0X_137 ➜	1/a/1068:1069,1/a/1209:1213	NA	NA
137	IL_6S0X_138 ➜	1/a/1071:1072,1/a/1205:1207	NA	NA
138	IL_6S0X_139 ➜	1/a/1072:1074,1/a/1203:1205	NA	NA
139	IL_6S0X_140 ➜	1/a/1133:1143,1/a/1152:1162	NA	NA
140	IL_6S0X_141 ➜	1/a/1256:1263,1/a/1294:1301	NA	NA
141	IL_6S0X_142 ➜	1/a/1264:1268,1/a/1287:1293	NA	NA
142	IL_6S0X_143 ➜	1/a/1269:1275,1/a/1280:1286	NA	NA
143	IL_6S0X_144 ➜	1/a/1313:1318,1/a/1339:1344	NA	NA
144	IL_6S0X_145 ➜	1/a/1409:1411,1/a/1512:1515	NA	NA
145	IL_6S0X_146 ➜	1/a/1411:1414,1/a/1508:1512	NA	NA
146	IL_6S0X_147 ➜	1/a/1415:1417,1/a/1505:1507	NA	NA
147	IL_6S0X_148 ➜	1/a/1417:1419,1/a/1502:1505	NA	NA
148	IL_6S0X_149 ➜	1/a/1422:1424,1/a/1497:1499	NA	NA
149	IL_6S0X_150 ➜	1/a/1426:1429,1/a/1492:1495	NA	NA
150	IL_6S0X_151 ➜	1/a/1434:1437,1/a/1484:1487	NA	NA
151	IL_6S0X_152 ➜	1/a/1440:1445,1/a/1477:1481	NA	NA
152	IL_6S0X_153 ➜	1/a/1445:1447,1/a/1475:1477	NA	NA
153	IL_6S0X_154 ➜	1/a/1449:1453,1/a/1470:1473	NA	NA

Problematic loops

#	loop id	Problem	Sequence
1	IL_6S0X_068 ➜	incomplete nts	NA

Valid loops

#	loop id	location	annotation	motif
1	J3_6S0X_001 ➜	1/A/32:35,1/A/491:507,1/A/514:519	NA	NA
2	J3_6S0X_002 ➜	1/A/56:57,1/A/70:76,1/A/109:113	NA	NA
3	J3_6S0X_003 ➜	1/A/340:344,1/A/359:369,1/A/379:384	NA	NA
4	J3_6S0X_004 ➜	1/A/728:734,1/A/818:820,1/A/836:839	NA	NA
5	J3_6S0X_005 ➜	1/A/743:745,1/A/777:781,1/A/805:808	NA	NA
6	J3_6S0X_006 ➜	1/A/1335:1340,1/A/1669:1671,1/A/1683:1686	NA	NA
7	J3_6S0X_007 ➜	1/A/1342:1346,1/A/1649:1655,1/A/1664:1667	NA	NA
8	J3_6S0X_008 ➜	1/A/2118:2120,1/A/2223:2229,1/A/2248:2255	NA	NA
9	J3_6S0X_009 ➜	1/A/2309:2312,1/A/2410:2422,1/A/2448:2454	NA	NA
10	J3_6S0X_010 ➜	1/A/2322:2324,1/A/2348:2350,1/A/2359:2364	NA	NA
11	J3_6S0X_011 ➜	1/A/2544:2547,1/A/2572:2574,1/A/2588:2594	NA	NA
12	J3_6S0X_012 ➜	1/A/2834:2835,1/A/2851:2857,1/A/2901:2906	NA	NA
13	J3_6S0X_013 ➜	1/B/9:14,1/B/66:68,1/B/103:106	NA	NA
14	J3_6S0X_014 ➜	1/a/47:48,1/a/369:375,1/a/401:403	NA	NA
15	J3_6S0X_015 ➜	1/a/594:596,1/a/659:662,1/a/762:763	NA	NA
16	J3_6S0X_016 ➜	1/a/680:681,1/a/725:733,1/a/740:742	NA	NA
17	J3_6S0X_017 ➜	1/a/834:837,1/a/866:870,1/a/877:883	NA	NA
18	J3_6S0X_018 ➜	1/a/952:955,1/a/1245:1247,1/a/1347:1350	NA	NA
19	J3_6S0X_019 ➜	1/a/964:971,1/a/982:993,1/a/1231:1235	NA	NA
20	J3_6S0X_020 ➜	1/a/998:1002,1/a/1056:1059,1/a/1219:1226	NA	NA
21	J3_6S0X_021 ➜	1/a/1074:1079,1/a/1118:1125,1/a/1196:1203	NA	NA
22	J3_6S0X_022 ➜	1/a/1084:1086,1/a/1093:1098,1/a/1109:1113	NA	NA
23	J3_6S0X_023 ➜	1/a/1247:1251,1/a/1306:1313,1/a/1344:1347	NA	NA

Problematic loops

No problematic loops

Coloring options: Nucleotide numbers

6S0X Internal, Hairpin and 3-way Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops