7TUT Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7TUT_001 | 1/K/37:44 | No text annotation Not in a motif group | geometric HL_5TBW_001 HL_06192.2 | |
| HL_7TUT_002 | 1/K/68:73 | No text annotation Not in a motif group | homologous HL_8C3A_002 HL_02862.2 | |
| HL_7TUT_003 | 1/K/89:95 | No text annotation Not in a motif group | homologous HL_8C3A_003 HL_67216.7 | |
| HL_7TUT_004 | 1/K/131:137 | No text annotation Not in a motif group | ||
| HL_7TUT_005 | 1/K/204:211 | No text annotation Not in a motif group | homologous HL_8C3A_005 HL_89380.2 | |
| HL_7TUT_006 | 1/K/222:226 | No text annotation Not in a motif group | homologous HL_8C3A_006 HL_98984.2 | |
| HL_7TUT_007 | 1/K/230:238 | No text annotation Not in a motif group | homologous HL_8C3A_007 HL_08002.8 | |
| HL_7TUT_008 | 1/K/289:298 | No text annotation Not in a motif group | homologous HL_8C3A_008 HL_71554.2 | |
| HL_7TUT_009 | 1/K/314:323 | No text annotation Not in a motif group | geometric HL_4QLM_002 HL_12078.2 | |
| HL_7TUT_010 | 1/K/368:373 | No text annotation Not in a motif group | homologous HL_8C3A_010 HL_42097.1 | |
| HL_7TUT_011 | 1/K/393:398 | No text annotation Not in a motif group | homologous HL_8C3A_011 HL_42097.1 | |
| HL_7TUT_012 | 1/K/520:641 | No text annotation Not in a motif group | ||
| HL_7TUT_013 | 1/K/759:904 | No text annotation Not in a motif group | ||
| HL_7TUT_014 | 1/K/962:970 | No text annotation Not in a motif group | ||
| HL_7TUT_015 | 1/K/989:1065 | No text annotation Not in a motif group | ||
| HL_7TUT_016 | 1/K/1178:1183 | No text annotation Not in a motif group | ||
| HL_7TUT_017 | 1/K/1317:1326 | No text annotation Not in a motif group | homologous HL_8C3A_014 HL_89380.2 | |
| HL_7TUT_018 | 1/K/1363:1374 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_23083.1 | |
| HL_7TUT_019 | 1/K/1389:1394 | No text annotation Not in a motif group | homologous HL_8C3A_016 HL_42097.1 | |
| HL_7TUT_020 | 1/K/1406B:1411A | No text annotation Not in a motif group | ||
| HL_7TUT_021 | 1/K/1436:1448 | No text annotation Not in a motif group | geometric HL_1ZCI_002 HL_12078.2 | |
| HL_7TUT_022 | 1/K/1479:1486 | Other HL Not in a motif group | geometric HL_5J7L_200 HL_34168.2 | |
| HL_7TUT_023 | 1/K/1561:1566 | No text annotation Not in a motif group | homologous HL_8C3A_019 HL_42097.1 | |
| HL_7TUT_024 | 1/K/1593:1602 | No text annotation Not in a motif group | homologous HL_8C3A_020 HL_39334.6 | |
| HL_7TUT_025 | 1/K/1627:1635 | No text annotation Not in a motif group | homologous HL_8C3A_021 HL_33817.1 | |
| HL_7TUT_026 | 1/K/1675:1680 | No text annotation Not in a motif group | homologous HL_8C3A_022 HL_96598.1 | |
| HL_7TUT_027 | 1/K/1760:1772 | No text annotation Not in a motif group | ||
| HL_7TUT_028 | 1/K/1816:1823 | No text annotation Not in a motif group | geometric HL_5TBW_024 HL_71554.2 | |
| HL_7TUT_029 | 1/K/1864:1870 | No text annotation Not in a motif group | homologous HL_8C3A_025 HL_42097.1 | |
| HL_7TUT_030 | 1/K/1886:1893 | No text annotation Not in a motif group | homologous HL_8C3A_026 HL_64430.2 | |
| HL_7TUT_031 | 1/K/1972:1994 | No text annotation Not in a motif group | ||
| HL_7TUT_032 | 1/K/2087:2270 | No text annotation Not in a motif group | ||
| HL_7TUT_033 | 1/K/2317:2322 | No text annotation Not in a motif group | homologous HL_8C3A_030 HL_42097.1 | |
| HL_7TUT_034 | 1/K/2376:2384 | No text annotation Not in a motif group | homologous HL_8C3A_031 HL_89380.2 | |
| HL_7TUT_035 | 1/K/2420:2426 | No text annotation Not in a motif group | homologous HL_8C3A_032 HL_46680.1 | |
| HL_7TUT_036 | 1/K/2458:2463 | No text annotation Not in a motif group | homologous HL_8C3A_033 HL_76539.2 | |
| HL_7TUT_037 | 1/K/2487:2491 | No text annotation Not in a motif group | ||
| HL_7TUT_038 | 1/K/2523:2532 | No text annotation Not in a motif group | homologous HL_8C3A_035 HL_69023.2 | |
| HL_7TUT_039 | 1/K/2561:2566 | GNRA Not in a motif group | geometric HL_4NLF_001 HL_42097.1 | |
| HL_7TUT_040 | 1/K/2578:2583 | No text annotation Not in a motif group | homologous HL_8C3A_036 HL_42097.1 | |
| HL_7TUT_041 | 1/K/2624:2632 | No text annotation Not in a motif group | homologous HL_8C3A_037 HL_60812.1 | |
| HL_7TUT_042 | 1/K/2664:2670 | No text annotation Not in a motif group | homologous HL_8C3A_038 HL_86373.2 | |
| HL_7TUT_043 | 1/K/2705:2710 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_7TUT_044 | 1/K/2738:2742 | No text annotation Not in a motif group | homologous HL_8C3A_040 HL_49678.1 | |
| HL_7TUT_045 | 1/K/2792:2799 | No text annotation Not in a motif group | homologous HL_8C3A_041 HL_64430.2 | |
| HL_7TUT_046 | 1/K/2810:2816 | No text annotation Not in a motif group | homologous HL_8C3A_042 HL_42097.1 | |
| HL_7TUT_047 | 1/K/2872:2877 | No text annotation Not in a motif group | geometric HL_7RQB_042 HL_03562.2 | |
| HL_7TUT_048 | 1/K/2901:3598 | No text annotation Not in a motif group | ||
| HL_7TUT_049 | 1/K/3614:3618 | No text annotation Not in a motif group | homologous HL_8C3A_045 HL_20062.1 | |
| HL_7TUT_050 | 1/K/3639:3649 | No text annotation Not in a motif group | homologous HL_8C3A_046 HL_43613.5 | |
| HL_7TUT_051 | 1/K/3668:3674 | No text annotation Not in a motif group | homologous HL_8C3A_047 HL_42097.1 | |
| HL_7TUT_052 | 1/K/3724:3729 | No text annotation Not in a motif group | homologous HL_8C3A_048 HL_42097.1 | |
| HL_7TUT_053 | 1/K/3757:3767 | No text annotation Not in a motif group | homologous HL_8C3A_049 HL_71924.2 | |
| HL_7TUT_054 | 1/K/3796:3804 | No text annotation Not in a motif group | homologous HL_8C3A_050 HL_51824.1 | |
| HL_7TUT_055 | 1/K/3873:3882 | No text annotation Not in a motif group | homologous HL_8C3A_051 HL_90642.6 | |
| HL_7TUT_056 | 1/K/4100:4108 | No text annotation Not in a motif group | ||
| HL_7TUT_057 | 1/K/4193:4201 | No text annotation Not in a motif group | homologous HL_8C3A_055 HL_53171.2 | |
| HL_7TUT_058 | 1/K/4210:4222 | No text annotation Not in a motif group | homologous HL_8C3A_056 HL_19870.6 | |
| HL_7TUT_059 | 1/K/4250:4258 | No text annotation Not in a motif group | homologous HL_8C3A_057 HL_76406.4 | |
| HL_7TUT_060 | 1/K/4270:4277 | No text annotation Not in a motif group | homologous HL_8C3A_058 HL_12078.2 | |
| HL_7TUT_061 | 1/K/4301:4309 | No text annotation Not in a motif group | homologous HL_8C3A_059 HL_92229.2 | |
| HL_7TUT_062 | 1/K/4321:4326 | No text annotation Not in a motif group | homologous HL_8C3A_060 HL_42097.1 | |
| HL_7TUT_063 | 1/K/4352:4362 | No text annotation Not in a motif group | geometric HL_4V83_139 HL_53597.2 | |
| HL_7TUT_064 | 1/K/4417:4425 | No text annotation Not in a motif group | homologous HL_8C3A_062 HL_06192.2 | |
| HL_7TUT_065 | 1/K/4474:4481 | No text annotation Not in a motif group | homologous HL_8C3A_063 HL_88526.2 | |
| HL_7TUT_066 | 1/K/4497:4503 | No text annotation Not in a motif group | homologous HL_8C3A_064 HL_43656.2 | |
| HL_7TUT_067 | 1/K/4540:4545 | No text annotation Not in a motif group | homologous HL_8C3A_065 HL_42097.1 | |
| HL_7TUT_068 | 1/K/4603:4608 | No text annotation Not in a motif group | homologous HL_8C3A_066 HL_42097.1 | |
| HL_7TUT_069 | 1/K/4646:4651 | No text annotation Not in a motif group | homologous HL_8C3A_067 HL_46680.1 | |
| HL_7TUT_070 | 1/K/4688:4702 | No text annotation Not in a motif group | homologous HL_8C3A_068 HL_56677.7 | |
| HL_7TUT_071 | 1/K/4775:4860 | No text annotation Not in a motif group | ||
| HL_7TUT_072 | 1/K/4906:4915 | No text annotation Not in a motif group | geometric HL_7RQB_011 HL_75407.1 | |
| HL_7TUT_073 | 1/K/4975:4983 | No text annotation Not in a motif group | homologous HL_8C3A_071 HL_27930.1 | |
| HL_7TUT_074 | 1/K/5021:5028 | No text annotation Not in a motif group | ||
| HL_7TUT_076 | 1/q/31:39 | tRNA anticodon loop Not in a motif group | geometric HL_4TUE_034 HL_53597.2 | |
| HL_7TUT_077 | 1/q/53:61 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_6PMO_005 HL_22280.1 | |
| HL_7TUT_078 | 1/u/36:41 | No text annotation Not in a motif group | homologous HL_5TBW_185 HL_87939.1 | |
| HL_7TUT_079 | 1/u/86:91 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_42097.1 | |
| HL_7TUT_080 | 1/v/47:56 | No text annotation Not in a motif group | geometric HL_4V9F_001 HL_99167.1 | |
| HL_7TUT_081 | 1/v/68:90 | No text annotation Not in a motif group | ||
| HL_7TUT_082 | 1/v/107:112 | No text annotation Not in a motif group | ||
| HL_7TUT_083 | 1/v/121:129 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7TUT_075 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7TUT_001 | 1/K/6:7, 1/v/149:151 | No text annotation Not in a motif group | homologous IL_8C3A_002 IL_61258.12 | |
| IL_7TUT_002 | 1/K/12:14, 1/v/143:144 | No text annotation Not in a motif group | homologous IL_8C3A_003 IL_83039.13 | |
| IL_7TUT_003 | 1/K/16:18, 1/v/139:141 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_51629.2 | |
| IL_7TUT_004 | 1/K/26:27, 1/K/55:57 | No text annotation Not in a motif group | homologous IL_8C3A_004 IL_76488.2 | |
| IL_7TUT_005 | 1/K/30:37, 1/K/44:52 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_35728.2 | |
| IL_7TUT_006 | 1/K/81:88, 1/K/96:102 | No text annotation Not in a motif group | homologous IL_8C3A_006 IL_88613.1 | |
| IL_7TUT_007 | 1/K/118:121, 1/K/152:153 | Multiple bulged bases Not in a motif group | geometric IL_6CZR_119 IL_16396.2 | |
| IL_7TUT_008 | 1/K/121:122, 1/K/147:152 | No text annotation Not in a motif group | homologous IL_8C3A_007 IL_19724.2 | |
| IL_7TUT_009 | 1/K/125:126, 1/K/142:144 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.12 | |
| IL_7TUT_010 | 1/K/168:174, 1/K/262:267 | No text annotation Not in a motif group | ||
| IL_7TUT_011 | 1/K/180:182, 1/K/255:256 | Single stack bend Not in a motif group | geometric IL_7RQB_005 IL_76488.2 | |
| IL_7TUT_012 | 1/K/182:189, 1/K/252:255 | No text annotation Not in a motif group | ||
| IL_7TUT_013 | 1/K/195:196, 1/K/244:246 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.12 | |
| IL_7TUT_014 | 1/K/199:201, 1/K/214:215 | No text annotation Not in a motif group | homologous IL_8C3A_013 IL_83039.13 | |
| IL_7TUT_015 | 1/K/339:342, 1/v/32:33 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_005 IL_88739.1 | |
| IL_7TUT_016 | 1/K/348:350, 1/v/25:26 | No text annotation Not in a motif group | homologous IL_8C3A_014 IL_37497.2 | |
| IL_7TUT_017 | 1/K/387:390, 1/K/401:414 | No text annotation Not in a motif group | homologous IL_8C3A_015 IL_60992.6 | |
| IL_7TUT_018 | 1/K/415:421, 1/v/13:19 | No text annotation Not in a motif group | homologous IL_8C3A_016 IL_66414.6 | |
| IL_7TUT_019 | 1/K/443:446, 1/K/1300:1304 | No text annotation Not in a motif group | ||
| IL_7TUT_020 | 1/K/448:450, 1/K/1297:1298 | No text annotation Not in a motif group | ||
| IL_7TUT_021 | 1/K/459:460, 1/K/695:697 | Single bulged C Not in a motif group | geometric IL_1S03_002 IL_61258.12 | |
| IL_7TUT_022 | 1/K/462:464, 1/K/691:693 | AA cWW Not in a motif group | geometric IL_4V88_467 IL_95997.1 | |
| IL_7TUT_023 | 1/K/466:472, 1/K/682:689 | No text annotation Not in a motif group | ||
| IL_7TUT_024 | 1/K/481:482, 1/K/672:673 | Single bulged C Not in a motif group | geometric IL_7KGA_004 IL_61258.12 | |
| IL_7TUT_025 | 1/K/482:485, 1/K/671:672 | Multiple bulged bases Not in a motif group | geometric IL_6JXM_001 IL_69996.1 | |
| IL_7TUT_026 | 1/K/487:488, 1/K/665:669 | Multiple bulged bases Not in a motif group | geometric IL_1R3E_002 IL_59677.2 | |
| IL_7TUT_027 | 1/K/491:493, 1/K/661:662 | No text annotation Not in a motif group | ||
| IL_7TUT_028 | 1/K/497:499, 1/K/656:657 | Single bulged C Not in a motif group | geometric IL_3SNP_003 IL_61258.12 | |
| IL_7TUT_029 | 1/K/508:510, 1/K/649:650 | Single bulged A Not in a motif group | geometric IL_6WPI_001 IL_37497.2 | |
| IL_7TUT_030 | 1/K/709:710, 1/K/1286:1288 | Single bulged G Not in a motif group | geometric IL_4LFB_036 IL_00225.2 | |
| IL_7TUT_031 | 1/K/723:724, 1/K/942:945 | Multiple bulged bases Not in a motif group | geometric IL_7V9E_001 IL_59677.2 | |
| IL_7TUT_032 | 1/K/727:731, 1/K/938:939 | No text annotation Not in a motif group | ||
| IL_7TUT_033 | 1/K/732:735, 1/K/928:937 | No text annotation Not in a motif group | ||
| IL_7TUT_034 | 1/K/737:739, 1/K/923:926 | No text annotation Not in a motif group | geometric IL_5J7L_341 IL_71530.2 | |
| IL_7TUT_035 | 1/K/745:752, 1/K/911:919 | No text annotation Not in a motif group | geometric IL_5TBW_020 IL_07703.1 | |
| IL_7TUT_036 | 1/K/1074:1076, 1/K/1234:1236 | UG cWW Not in a motif group | geometric IL_4LFB_061 IL_95997.1 | |
| IL_7TUT_037 | 1/K/1077:1081, 1/K/1218:1233 | No text annotation Not in a motif group | ||
| IL_7TUT_038 | 1/K/1082:1084, 1/K/1213:1217 | Isolated cWS basepair Not in a motif group | geometric IL_4TS2_003 IL_52767.2 | |
| IL_7TUT_039 | 1/K/1086:1087, 1/K/1209:1211 | Single bulged C Not in a motif group | geometric IL_3W3S_001 IL_61258.12 | |
| IL_7TUT_040 | 1/K/1097:1168, 1/K/1193:1199 | No text annotation Not in a motif group | ||
| IL_7TUT_041 | 1/K/1173:1175, 1/K/1186:1188 | Isolated cWH basepair Not in a motif group | geometric IL_3W3S_003 IL_51629.2 | |
| IL_7TUT_042 | 1/K/1357:1360, 1/K/1379:1382 | No text annotation Not in a motif group | ||
| IL_7TUT_043 | 1/K/1360:1361, 1/K/1376:1379 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_003 IL_69996.1 | |
| IL_7TUT_044 | 1/K/1425:1429, 1/K/1455:1460 | Triple sheared related Not in a motif group | geometric IL_4V9F_018 IL_64879.2 | |
| IL_7TUT_045 | 1/K/1431:1434, 1/K/1450:1453 | Double sheared Not in a motif group | geometric IL_4KZD_002 IL_09705.9 | |
| IL_7TUT_046 | 1/K/1467:1468, 1/K/1496:1498 | No text annotation Not in a motif group | homologous IL_8C3A_026 IL_37497.2 | |
| IL_7TUT_047 | 1/K/1474:1476, 1/K/1489:1490 | Single stack bend Not in a motif group | geometric IL_7A0S_005 IL_76488.2 | |
| IL_7TUT_048 | 1/K/1520:1522, 1/K/1655:1657 | No text annotation Not in a motif group | homologous IL_8C3A_029 IL_95997.1 | |
| IL_7TUT_049 | 1/K/1522:1526, 1/K/1648:1655 | No text annotation Not in a motif group | homologous IL_8C3A_030 IL_17470.6 | |
| IL_7TUT_050 | 1/K/1550:1551, 1/K/1576:1578 | No text annotation Not in a motif group | homologous IL_8C3A_032 IL_00225.2 | |
| IL_7TUT_051 | 1/K/1551:1555, 1/K/1572:1576 | Triple sheared Not in a motif group | geometric IL_5J7L_263 IL_56467.8 | |
| IL_7TUT_052 | 1/K/1586:1589, 1/K/1605:1607 | No text annotation Not in a motif group | homologous IL_8C3A_034 IL_05564.2 | |
| IL_7TUT_053 | 1/K/1590:1592, 1/K/1603:1604 | No text annotation Not in a motif group | homologous IL_8C3A_035 IL_83039.13 | |
| IL_7TUT_054 | 1/K/1624:1626, 1/K/1636:1640 | Multiple bulged bases Not in a motif group | geometric IL_5TBW_033 IL_90991.6 | |
| IL_7TUT_055 | 1/K/1671:1673, 1/K/1682:1684 | No text annotation Not in a motif group | homologous IL_8C3A_037 IL_95997.1 | |
| IL_7TUT_056 | 1/K/1686:1688, 1/K/1848:1851 | No text annotation Not in a motif group | ||
| IL_7TUT_057 | 1/K/1694:1721, 1/K/1841:1842 | No text annotation Not in a motif group | ||
| IL_7TUT_058 | 1/K/1723:1725, 1/K/1838:1839 | No text annotation Not in a motif group | homologous IL_8C3A_040 IL_00225.2 | |
| IL_7TUT_059 | 1/K/1732:1737, 1/K/1792:1797 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_81631.1 | |
| IL_7TUT_060 | 1/K/1737:1738, 1/K/1790:1792 | No text annotation Not in a motif group | homologous IL_8C3A_042 IL_42622.2 | |
| IL_7TUT_061 | 1/K/1739:1744, 1/K/1786:1789 | No text annotation Not in a motif group | homologous IL_8C3A_043 IL_02509.1 | |
| IL_7TUT_062 | 1/K/1746:1749, 1/K/1781:1784 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_041 IL_30621.2 | |
| IL_7TUT_063 | 1/K/1749:1751, 1/K/1779:1781 | No text annotation Not in a motif group | homologous IL_8C3A_045 IL_95997.1 | |
| IL_7TUT_064 | 1/K/1753:1756, 1/K/1776:1777 | No text annotation Not in a motif group | ||
| IL_7TUT_065 | 1/K/1814:1816, 1/K/1823:1824 | No text annotation Not in a motif group | homologous IL_8C3A_048 IL_00225.2 | |
| IL_7TUT_066 | 1/K/1858:1860, 1/K/1874:1876 | No text annotation Not in a motif group | homologous IL_8C3A_049 IL_95997.1 | |
| IL_7TUT_067 | 1/K/1861:1863, 1/K/1871:1873 | No text annotation Not in a motif group | homologous IL_8C3A_050 IL_52767.2 | |
| IL_7TUT_068 | 1/K/1905:1909, 1/K/2067:2071 | No text annotation Not in a motif group | homologous IL_8C3A_051 IL_89002.2 | |
| IL_7TUT_069 | 1/K/1911:1918, 1/K/2064:2065 | No text annotation Not in a motif group | homologous IL_8C3A_052 IL_15861.7 | |
| IL_7TUT_070 | 1/K/1918:1920, 1/K/2063:2064 | No text annotation Not in a motif group | ||
| IL_7TUT_071 | 1/K/1920:1922, 1/K/2062:2063 | No text annotation Not in a motif group | ||
| IL_7TUT_072 | 1/K/1926:1933, 1/K/2053:2058 | No text annotation Not in a motif group | homologous IL_8C3A_054 IL_27086.1 | |
| IL_7TUT_073 | 1/K/1933:1944, 1/K/2038:2053 | No text annotation Not in a motif group | geometric IL_5TBW_052 IL_53762.1 | |
| IL_7TUT_074 | 1/K/1946:1948, 1/K/2035:2036 | No text annotation Not in a motif group | homologous IL_8C3A_056 IL_83039.13 | |
| IL_7TUT_075 | 1/K/2083:2085, 1/K/2272:2273 | Single bulged U Not in a motif group | geometric IL_6CZR_156 IL_83039.13 | |
| IL_7TUT_076 | 1/K/2290:2292, 1/K/2342:2345 | No text annotation Not in a motif group | homologous IL_8C3A_061 IL_52767.2 | |
| IL_7TUT_077 | 1/K/2299:2301, 1/K/2334:2335 | No text annotation Not in a motif group | homologous IL_8C3A_062 IL_37497.2 | |
| IL_7TUT_078 | 1/K/2302:2309, 1/K/2329:2333 | No text annotation Not in a motif group | homologous IL_8C3A_063 IL_70923.2 | |
| IL_7TUT_079 | 1/K/2312:2314, 1/K/2325:2326 | Single bulged A Not in a motif group | geometric IL_7RQB_033 IL_37497.2 | |
| IL_7TUT_080 | 1/K/2358:2364, 1/K/3858:3863 | No text annotation Not in a motif group | homologous IL_8C3A_065 IL_76042.2 | |
| IL_7TUT_081 | 1/K/2415:2419, 1/K/2427:2429 | C-loop Not in a motif group | geometric IL_7A0S_047 IL_37712.2 | |
| IL_7TUT_082 | 1/K/2446:2450, 1/K/2509:2514 | No text annotation Not in a motif group | homologous IL_8C3A_067 IL_89002.2 | |
| IL_7TUT_083 | 1/K/2477:2479, 1/K/2499:2500 | Single stack bend Not in a motif group | geometric IL_5J7L_032 IL_76488.2 | |
| IL_7TUT_084 | 1/K/2542:2547, 1/K/2772:2774 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_4WF9_041 IL_82068.2 | |
| IL_7TUT_085 | 1/K/2549:2550, 1/K/2768:2770 | Single bulged U Not in a motif group | geometric IL_6JQ5_003 IL_83039.13 | |
| IL_7TUT_086 | 1/K/2589:2593, 1/K/2752:2756 | No text annotation Not in a motif group | homologous IL_8C3A_073 IL_56467.8 | |
| IL_7TUT_087 | 1/K/2613:2614, 1/K/2724:2726 | No text annotation Not in a motif group | homologous IL_8C3A_075 IL_61258.12 | |
| IL_7TUT_088 | 1/K/2614:2615, 1/K/2722:2724 | Single stack bend Not in a motif group | geometric IL_5J7L_249 IL_76488.2 | |
| IL_7TUT_089 | 1/K/2646:2648, 1/K/2685:2688 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_4V9F_076 IL_38958.7 | |
| IL_7TUT_090 | 1/K/2651:2653, 1/K/2681:2682 | Single bulged G Not in a motif group | geometric IL_4WF9_023 IL_00225.2 | |
| IL_7TUT_091 | 1/K/2656:2662, 1/K/2672:2678 | No text annotation Not in a motif group | homologous IL_8C3A_079 IL_60192.2 | |
| IL_7TUT_092 | 1/K/2704:2705, 1/K/2710:2712 | No text annotation Not in a motif group | ||
| IL_7TUT_093 | 1/K/2832:2838, 1/K/3850:3853 | No text annotation Not in a motif group | homologous IL_8C3A_080 IL_49460.2 | |
| IL_7TUT_094 | 1/K/2844:2846, 1/K/3842:3844 | No text annotation Not in a motif group | homologous IL_8C3A_081 IL_54997.7 | |
| IL_7TUT_095 | 1/K/2847:2850, 1/K/3840:3841 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_5TBW_076 IL_50694.2 | |
| IL_7TUT_096 | 1/K/2850:2855, 1/K/3837:3840 | No text annotation Not in a motif group | homologous IL_8C3A_083 IL_82842.2 | |
| IL_7TUT_097 | 1/K/2867:2872, 1/K/2877:2883 | No text annotation Not in a motif group | homologous IL_8C3A_084 IL_65969.2 | |
| IL_7TUT_098 | 1/K/2889:2891, 1/K/3610:3612 | No text annotation Not in a motif group | homologous IL_8C3A_085 IL_95997.1 | |
| IL_7TUT_099 | 1/K/2896:2897, 1/K/3602:3605 | No text annotation Not in a motif group | homologous IL_8C3A_086 IL_74125.1 | |
| IL_7TUT_100 | 1/K/3632:3633, 1/K/3827:3829 | No text annotation Not in a motif group | homologous IL_8C3A_087 IL_37497.2 | |
| IL_7TUT_101 | 1/K/3660:3665, 1/K/3677:3684 | No text annotation Not in a motif group | homologous IL_8C3A_088 IL_64509.1 | |
| IL_7TUT_102 | 1/K/3700:3703, 1/K/3749:3750 | No text annotation Not in a motif group | homologous IL_8C3A_089 IL_88739.1 | |
| IL_7TUT_103 | 1/K/3704:3705, 1/K/3745:3748 | No text annotation Not in a motif group | homologous IL_8C3A_090 IL_16396.2 | |
| IL_7TUT_104 | 1/K/3708:3710, 1/K/3741:3742 | No text annotation Not in a motif group | homologous IL_8C3A_091 IL_76488.2 | |
| IL_7TUT_105 | 1/K/3710:3714, 1/K/3739:3741 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4WF9_003 IL_65006.1 | |
| IL_7TUT_106 | 1/K/3715:3721, 1/K/3732:3738 | No text annotation Not in a motif group | homologous IL_8C3A_093 IL_36973.6 | |
| IL_7TUT_107 | 1/K/3780:3781, 1/K/3811:3814 | No text annotation Not in a motif group | homologous IL_8C3A_094 IL_59677.2 | |
| IL_7TUT_108 | 1/K/3781:3792, 1/K/3808:3811 | No text annotation Not in a motif group | geometric IL_5TBW_090 IL_81589.2 | |
| IL_7TUT_109 | 1/K/3895:3898, 1/K/4563:4565 | No text annotation Not in a motif group | homologous IL_8C3A_096 IL_63450.2 | |
| IL_7TUT_110 | 1/K/3900:3902, 1/K/4558:4561 | No text annotation Not in a motif group | homologous IL_8C3A_097 IL_54678.5 | |
| IL_7TUT_111 | 1/K/3913:3915, 1/K/4388:4389 | No text annotation Not in a motif group | homologous IL_8C3A_098 IL_83039.13 | |
| IL_7TUT_112 | 1/K/3916:3917, 1/K/4384:4387 | No text annotation Not in a motif group | homologous IL_8C3A_099 IL_42622.2 | |
| IL_7TUT_113 | 1/K/3927:3929, 1/K/4181:4184 | No text annotation Not in a motif group | homologous IL_8C3A_100 IL_38958.7 | |
| IL_7TUT_114 | 1/K/4082:4088, 1/K/4161:4164 | No text annotation Not in a motif group | homologous IL_8C3A_106 IL_74114.1 | |
| IL_7TUT_115 | 1/K/4095:4100, 1/K/4108:4113 | No text annotation Not in a motif group | geometric IL_6O5F_001 IL_04668.1 | |
| IL_7TUT_116 | 1/K/4191:4192, 1/K/4202:4204 | No text annotation Not in a motif group | homologous IL_8C3A_107 IL_69996.1 | |
| IL_7TUT_117 | 1/K/4243:4245, 1/K/4263:4267 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_5TBW_099 IL_38958.7 | |
| IL_7TUT_118 | 1/K/4291:4293, 1/K/4317:4318 | Single bulged A Not in a motif group | geometric IL_4V88_399 IL_37497.2 | |
| IL_7TUT_119 | 1/K/4295:4298, 1/K/4312:4315 | No text annotation Not in a motif group | homologous IL_8C3A_109 IL_30621.2 | |
| IL_7TUT_120 | 1/K/4347:4350, 1/K/4364:4365 | Single stack bend Not in a motif group | geometric IL_4V9F_081 IL_76488.2 | |
| IL_7TUT_121 | 1/K/4400:4401, 1/K/4442:4444 | Major groove platform Not in a motif group | geometric IL_5TBW_102 IL_27635.1 | |
| IL_7TUT_122 | 1/K/4401:4403, 1/K/4440:4442 | No text annotation Not in a motif group | geometric IL_5TBW_103 IL_95997.1 | |
| IL_7TUT_123 | 1/K/4403:4405, 1/K/4439:4440 | Major groove platform Not in a motif group | geometric IL_5TBW_104 IL_76223.2 | |
| IL_7TUT_124 | 1/K/4405:4407, 1/K/4435:4439 | No text annotation Not in a motif group | geometric IL_5TBW_105 IL_92788.2 | |
| IL_7TUT_125 | 1/K/4412:4416, 1/K/4426:4430 | No text annotation Not in a motif group | homologous IL_8C3A_114 NA | |
| IL_7TUT_126 | 1/K/4453:4454, 1/K/4526:4528 | No text annotation Not in a motif group | homologous IL_8C3A_115 IL_76223.2 | |
| IL_7TUT_127 | 1/K/4456:4458, 1/K/4520:4524 | No text annotation Not in a motif group | homologous IL_8C3A_116 IL_90933.2 | |
| IL_7TUT_128 | 1/K/4458:4459, 1/K/4517:4520 | Multiple bulged bases Not in a motif group | geometric IL_4V9F_088 IL_71530.2 | |
| IL_7TUT_129 | 1/K/4466:4468, 1/K/4489:4491 | No text annotation Not in a motif group | geometric IL_5TBW_110 IL_51629.2 | |
| IL_7TUT_130 | 1/K/4468:4470, 1/K/4485:4489 | No text annotation Not in a motif group | ||
| IL_7TUT_131 | 1/K/4495:4497, 1/K/4503:4505 | No text annotation Not in a motif group | geometric IL_5TBW_112 IL_95997.1 | |
| IL_7TUT_132 | 1/K/4537:4538, 1/K/4547:4549 | Single bulged A Not in a motif group | geometric IL_7RQB_101 IL_37497.2 | |
| IL_7TUT_133 | 1/K/4580:4582, 1/K/4721:4723 | Isolated cWH basepair Not in a motif group | geometric IL_3CZW_002 IL_51629.2 | |
| IL_7TUT_134 | 1/K/4582:4585, 1/K/4717:4721 | No text annotation Not in a motif group | homologous IL_8C3A_123 IL_09705.9 | |
| IL_7TUT_135 | 1/K/4590:4592, 1/K/4618:4620 | No text annotation Not in a motif group | homologous IL_8C3A_124 IL_95997.1 | |
| IL_7TUT_136 | 1/K/4596:4603, 1/K/4608:4614 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_5TBW_116 IL_04346.7 | |
| IL_7TUT_137 | 1/K/4624:4629, 1/K/4669:4673 | No text annotation Not in a motif group | ||
| IL_7TUT_138 | 1/K/4632:4637, 1/K/4662:4666 | No text annotation Not in a motif group | homologous IL_8C3A_127 IL_17136.1 | |
| IL_7TUT_139 | 1/K/4638:4640, 1/K/4659:4661 | Isolated cWH basepair Not in a motif group | geometric IL_3SJ2_002 IL_51629.2 | |
| IL_7TUT_140 | 1/K/4641:4642, 1/K/4655:4658 | No text annotation Not in a motif group | homologous IL_8C3A_128 IL_71530.2 | |
| IL_7TUT_141 | 1/K/4680:4685, 1/K/4705:4710 | UAA/GAN with extra cWW Not in a motif group | geometric IL_5J7L_350 IL_49767.5 | |
| IL_7TUT_142 | 1/K/4739:4746, 1/K/4954:4960 | No text annotation Not in a motif group | ||
| IL_7TUT_143 | 1/K/4756:4766, 1/K/4868:4877 | No text annotation Not in a motif group | ||
| IL_7TUT_144 | 1/K/4769:4773, 1/K/4862:4865 | No text annotation Not in a motif group | ||
| IL_7TUT_145 | 1/K/4885:4888, 1/K/4931:4934 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4K27_003 IL_30621.2 | |
| IL_7TUT_146 | 1/K/4890:4896, 1/K/4924:4929 | No text annotation Not in a motif group | ||
| IL_7TUT_147 | 1/K/4898:4903, 1/K/4918:4922 | No text annotation Not in a motif group | ||
| IL_7TUT_148 | 1/K/4972:4975, 1/K/4983:4986 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_129 IL_30621.2 | |
| IL_7TUT_149 | 1/K/4992:4994, 1/K/5057:5059 | No text annotation Not in a motif group | geometric IL_5UNE_007 IL_95997.1 | |
| IL_7TUT_150 | 1/K/4996:4997, 1/K/5053:5055 | Single bulged C Not in a motif group | geometric IL_1KUQ_002 IL_61258.12 | |
| IL_7TUT_151 | 1/K/5000:5002, 1/K/5045:5050 | No text annotation Not in a motif group | homologous IL_8C3A_138 IL_90933.2 | |
| IL_7TUT_152 | 1/K/5003:5009, 1/K/5039:5044 | No text annotation Not in a motif group | ||
| IL_7TUT_153 | 1/K/5012:5014, 1/K/5035:5036 | No text annotation Not in a motif group | homologous IL_8C3A_140 IL_83039.13 | |
| IL_7TUT_154 | 1/K/5014:5017, 1/K/5032:5035 | No text annotation Not in a motif group | homologous IL_8C3A_141 IL_09705.9 | |
| IL_7TUT_155 | 1/q/2:4, 1/q/69:71 | No text annotation Not in a motif group | geometric IL_3GM7_006 IL_95997.1 | |
| IL_7TUT_156 | 1/u/15:16, 1/u/62:64 | Single bulged A Not in a motif group | homologous IL_5TBW_372 IL_37497.2 | |
| IL_7TUT_157 | 1/u/21:27, 1/u/52:57 | No text annotation Not in a motif group | homologous IL_5TBW_373 IL_10207.2 | |
| IL_7TUT_158 | 1/u/28:29, 1/u/48:51 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V9F_103 IL_09061.6 | |
| IL_7TUT_159 | 1/u/32:36, 1/u/41:45 | Symmetric double minor groove platform Not in a motif group | geometric IL_7RQB_114 IL_58103.6 | |
| IL_7TUT_160 | 1/u/71:78, 1/u/98:104 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_7A0S_007 IL_04346.7 | |
| IL_7TUT_161 | 1/u/79:81, 1/u/95:97 | No text annotation Not in a motif group | geometric IL_4V88_470 IL_51629.2 | |
| IL_7TUT_162 | 1/u/82:85, 1/u/92:94 | No text annotation Not in a motif group | homologous IL_5TBW_378 IL_95997.1 | |
| IL_7TUT_163 | 1/v/64:66, 1/v/92:95 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5TBW_145 IL_82068.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_7TUT_001 | 1/K/112:116, 1/K/155:160, 1/K/275:278 | No text annotation Not in a motif group | ||
| J3_7TUT_002 | 1/K/380:387, 1/K/414:415, 1/v/19:20 | No text annotation Not in a motif group | ||
| J3_7TUT_003 | 1/K/980:984, 1/K/1070:1074, 1/K/1236:1275 | No text annotation Not in a motif group | ||
| J3_7TUT_004 | 1/K/1531:1537, 1/K/1622:1624, 1/K/1640:1643 | No text annotation Not in a motif group | homologous J3_8C3A_003 NA | |
| J3_7TUT_005 | 1/K/1545:1548, 1/K/1580:1584, 1/K/1609:1614 | No text annotation Not in a motif group | ||
| J3_7TUT_006 | 1/K/1726:1727, 1/K/1802:1806, 1/K/1832:1837 | No text annotation Not in a motif group | ||
| J3_7TUT_007 | 1/K/2393:2399, 1/K/2805:2807, 1/K/2819:2822 | No text annotation Not in a motif group | homologous J3_8C3A_006 NA | |
| J3_7TUT_008 | 1/K/2402:2405, 1/K/2785:2791, 1/K/2800:2802 | No text annotation Not in a motif group | homologous J3_8C3A_007 NA | |
| J3_7TUT_009 | 1/K/2440:2445, 1/K/2515:2519, 1/K/2536:2537 | No text annotation Not in a motif group | ||
| J3_7TUT_010 | 1/K/2551:2555, 1/K/2572:2575, 1/K/2757:2767 | No text annotation Not in a motif group | ||
| J3_7TUT_011 | 1/K/2575:2576, 1/K/2585:2589, 1/K/2756:2757 | No text annotation Not in a motif group | ||
| J3_7TUT_012 | 1/K/3937:3939, 1/K/4074:4078, 1/K/4168:4173 | No text annotation Not in a motif group | ||
| J3_7TUT_013 | 1/K/4091:4094, 1/K/4114:4129, 1/K/4155:4158 | No text annotation Not in a motif group | ||
| J3_7TUT_014 | 1/K/4241:4243, 1/K/4267:4269, 1/K/4278:4283 | No text annotation Not in a motif group | homologous J3_8C3A_010 NA | |
| J3_7TUT_015 | 1/K/4463:4466, 1/K/4491:4493, 1/K/4507:4513 | No text annotation Not in a motif group | homologous J3_8C3A_011 NA | |
| J3_7TUT_016 | 1/K/4970:4972, 1/K/4986:4991, 1/K/5060:5063 | No text annotation Not in a motif group | ||
| J3_7TUT_017 | 1/u/9:14, 1/u/65:66, 1/u/109:110 | No text annotation Not in a motif group | homologous J3_5TBW_045 NA | |
| J3_7TUT_018 | 1/v/44:45, 1/v/58:64, 1/v/95:99 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Coloring options: